Pregenerated sensors for OLFR1089 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000111711

Ensembl transcript IDs: ENSMUST00000214317.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR GCA 90 bp	GTGGCAACAGTGATTAATGTTAGTGCTCAATTCCTCTTCTCAGTTTTACTAAGTGTTGCAAAAGCCTTGTaGCTGCCCTCAGTAGAGTTC	+
Preference number: 4 (lower is better) Translates to: VATVINVSAQFLFSVLLSVAKAL*LPSVEF Trigger: GAACTCTACTGAGGGCAGGCACAAGGCTTTTGCAAC...ACTTAGTAAAACTGAGAAGAGGAATTGAGCACTAACATTAATCACTGTTGCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214317.2
CDS-3UTR CCA 90 bp	CACAGTCAAGTGGCAACAGTGATTAATGTTAGTGCTCAATTCCTCTTCTCAGTTTCATGGTATAAAAGATaGATGCCAACTTGTCAGTGT	+
Preference number: 4 (lower is better) Translates to: HSQVATVINVSAQFLFSVSWYKR*MPTCQC Trigger: ACACTGACAAGTTGGCATCCATCTTTTATACCATGA...AACTGAGAAGAGGAATTGAGCACTAACATTAATCACTGTTGCCACTTGACTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214317.2
CDS-3UTR TCA 90 bp	GTGGCAACAGTGATTAATGTTAGTGCTCAATTCCTCTTCTCAGTTTTACTAAGTCCAACATTTCTTCTTTaGCATGATGACATTGTAGAG	+
Preference number: 4 (lower is better) Translates to: VATVINVSAQFLFSVLLSPTFLL*HDDIVE Trigger: CTCTACAATGTCATCATGTCAAAGAAGAAATGTTGG...ACTTAGTAAAACTGAGAAGAGGAATTGAGCACTAACATTAATCACTGTTGCCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214317.2
CDS-3UTR CAA 90 bp	AGTCAAGTGGCAACAGTGATTAATGTTAGTGCTCAATTCCTCTTCTCAGTTTTACAAGTTGCAAAAGCCTaGTGCCTGCCCTCAGTAGAG	+
Preference number: 5 (lower is better) Translates to: SQVATVINVSAQFLFSVLQVAKA*CLPSVE Trigger: CTCTACTGAGGGCAGGCACAAGGCTTTTGCAACTTG...TAAAACTGAGAAGAGGAATTGAGCACTAACATTAATCACTGTTGCCACTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214317.2
CDS-3UTR CAA 90 bp	AGTCAAGTGGCAACAGTGATTAATGTTAGTGCTCAATTCCTCTTCTCAGTTTTATGTGTGATCCACAAGTaGCAAAAGCCTTGTGCCTGC	+
Preference number: 5 (lower is better) Translates to: SQVATVINVSAQFLFSVLCVIHK*QKPCAC Trigger: GCAGGCACAAGGCTTTTGCAACTTGTGGATCACACA...TAAAACTGAGAAGAGGAATTGAGCACTAACATTAATCACTGTTGCCACTTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214317.2

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