Pregenerated sensors for OLFR1087 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075174Ensembl transcript IDs: ENSMUST00000099877.2, ENSMUST00000214141.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAAATTGCTAGATGCAGATTAGTAGACCCCAATGGAGCAAGGAACAGGCAGATGTGGCCTCTGCGTGTGTaGGTCTTTGGGCATGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EIARCRLVDPNGARNRQMWPLRV*VFGHAH Trigger: GTGAGCATGCCCAAAGACTCACACACGCAGAGGCCA...CATCTGCCTGTTCCTTGCTCCATTGGGGTCTACTAATCTGCATCTAGCAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATTGCTAGATGCAGATTAGTAGACCCCAATGGAGCAAGGAACAGGCAGATGTTCTCCTCTGGCCTCTaGGTGTGTGAGTCTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: EIARCRLVDPNGARNRQMFSSGL*VCESLG Trigger: GCCCAAAGACTCACACACGCAGAGGCCAGAGGAGAA...CATCTGCCTGTTCCTTGCTCCATTGGGGTCTACTAATCTGCATCTAGCAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR GCA 90 bp | CTACCCACCCACTCCCACTTCTTGGCCCTGTTGTTCCCCTATACTGAGGCATATACAAATGCACATAGATaGCATATTATACCTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LPTHSHFLALLFPYTEAYTNAHR*HIIPCR Trigger: CCTGCAAGGTATAATATGGCATCTATGTGCATTTGT...ATATGCCTCAGTATAGGGGAACAACAGGGCCAAGAAGTGGGAGTGGGTGGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCCAAACCTTGGTCCTATaGCACTCCTGGCAAAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIQTLVL*HSWQSS Trigger: TGAACTTTGCCAGGAGTGTCATAGGACCAAGGTTTG...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATTGCTAGATGCAGATTAGTAGACCCCAATGGAGCAAGGAACAGGCAGATGAAAGTTTTCTTTCACTaGGAGGACCTATCTCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: EIARCRLVDPNGARNRQMKVFFH*EDLSQG Trigger: GCCTTGAGATAGGTCCTCTCAGTGAAAGAAAACTTT...CATCTGCCTGTTCCTTGCTCCATTGGGGTCTACTAATCTGCATCTAGCAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATTGCTAGATGCAGATTAGTAGACCCCAATGGAGCAAGGAACAGGCAGATGATAGAGAAGCACTTCTaGACATTTGTACACAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EIARCRLVDPNGARNRQMIEKHF*TFVHRE Trigger: CTCTCTGTGTACAAATGTTCAGAAGTGCTTCTCTAT...CATCTGCCTGTTCCTTGCTCCATTGGGGTCTACTAATCTGCATCTAGCAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCAACAGGCAGATGAGATaGAGTGGAAAGTTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: VVYKHGNMLHMPLIHIGINRQMR*SGKFSF Trigger: GAAAGAAAACTTTCCACTTCATCTCATCTGCCTGTT...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCCATTTACATTTCCAGTaGTATCCCAAAAGTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIHLHFQ*YPKSLP Trigger: TGGCAGACTTTTGGGATAGCACTGGAAATGTAAATG...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCTTTCAGCAAAGCTTTTaGTGTGGTTGGTTAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIFQQSF*CGWLIS Trigger: GCTGATTAACCAACCACAGCAAAAGCTTTGCTGAAA...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCAGGTTCATTCAATTCTaGTTAGTAGAAATCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIRFIQF*LVEILL Trigger: CAAGAGGATTTCTACTAACCAGAATTGAATGAACCT...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CCA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCTTCTGGCTAATTCTATaGCAGAACCCAGAAAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPFWLIL*QNPESV Trigger: TACACTTTCTGGGTTCTGCCATAGAATTAGCCAGAA...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACACCTTGCAGGAGGAATaGCACAAACAGCAAATAAAT | + |
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Preference number: 2 (lower is better) Translates to: VRYFLHLHFQCYPKSLPNTLQEE*HKQQIN Trigger: ATTTATTTGCTGTTTGTGGCATTCCTCCTGCAAGGT...GTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGTGGTTGGTTAATCAGCATAGGATGAGAAATTGTTTGAGACTATTTGAATGCCATATTATACCTTaGAGGAGGAATGCCACAAAC | + |
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Preference number: 2 (lower is better) Translates to: LLWLVNQHRMRNCLRLFECHIIP*RRNATN Trigger: GTTTGTGGCATTCCTCCTGCAAGGTATAATATGGCA...TTCAAATAGTCTCAAACAATTTCTCATCCTATGCTGATTAACCAACCACAGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR CAA 90 bp | AGCAATATGTTAAGTATACAAAACAGTGGAAGACAGAAGAAAGACTaGATGGTGAAAATCAAATGCTCCAAAGACATTGCAAGCATGGTC | + |
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Preference number: 2 (lower is better) Translates to: SNMLSIQNSGRQKKD*MVKIKCSKDIASMV Trigger: GACCATGCTTGCAATGTCTTTGGAGCATTTGATTTTCACCATCAAGTCTTTCTTCTGTCTTCCACTGTTTTGTATACTTAACATATTGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGTGGTTGGTTAATCAGCATAGGATGAGAAATTGTTTGAGACTATTTGAAACTAAGTTACCAAGCTaGAACATGTTACCAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LLWLVNQHRMRNCLRLFETKLPS*NMLPKA Trigger: GGCTTTTGGTAACATGTTTCAGCTTGGTAACTTAGT...TTCAAATAGTCTCAAACAATTTCTCATCCTATGCTGATTAACCAACCACAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGTGGTTGGTTAATCAGCATAGGATGAGAAATTGTTTGAGACTATTTGAAAAACCCTTTGGAAAATaGAGGCTTAGCATTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: LLWLVNQHRMRNCLRLFEKPFGK*RLSILI Trigger: GATCAAAATGCTAAGCCTTCATTTTCCAAAGGGTTT...TTCAAATAGTCTCAAACAATTTCTCATCCTATGCTGATTAACCAACCACAGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR CCA 72 bp | CAGAGTTCTCCTCTGGCCTCTGCGTGTGTGAGTCTTTaGGCATGCTCACACTCTAACATGCCTATACCATAT | + |
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Preference number: 3 (lower is better) Translates to: QSSPLASACVSL*ACSHSNMPIPY Trigger: ATATGGTATAGGCATGTTAGAGTGTGAGCATGCCCAAAGACTCACACACGCAGAGGCCAGAGGAGAACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR CCA 72 bp | TTTTGGGTCTTGGGATATGTCTCAGAGGGTTCTCTGTaGTCTATAAGCATGGAAACATGCTTCACATGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FWVLGYVSEGSL*SISMETCFTCP Trigger: GGGGCATGTGAAGCATGTTTCCATGCTTATAGACCACAGAGAACCCTCTGAGACATATCCCAAGACCCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR TCA 72 bp | TGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTaGTTCACATTGGAATCCAGGTACAGTAAAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: WSISMETCFTCP*FTLESRYSKAC Trigger: GCATGCTTTACTGTACCTGGATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR CCA 72 bp | GCATGGAAACATGCTTCACATGCCCCTGATTCACATTaGAATCCAGGTACAGTAAAGCATGCTTACAATCTT | + |
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Preference number: 3 (lower is better) Translates to: AWKHASHAPDSH*NPGTVKHAYNL Trigger: AAGATTGTAAGCATGCTTTACTGTACCTGGATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCAACAAGTTAAAGGCCTaGTTATTGAGTCTTACCCTC | + |
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Preference number: 3 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPNKLKA*LLSLTL Trigger: GAGGGTAAGACTCAATAACAAGGCCTTTAACTTGTT...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR CCA 72 bp | CTTAAAGAAATGCTGTCTTCCTCTAAATTATGTACTTaGTACTACATGAGAGCGTGTAGCCGCACAAACCTT | + |
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Preference number: 3 (lower is better) Translates to: LKEMLSSSKLCT*YYMRACSRTNL Trigger: AAGGTTTGTGCGGCTACACGCTCTCATGTAGTACCAAGTACATAATTTAGAGGAAGACAGCATTTCTTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACATGCCATATTATACCTaGCAGGAGGAATGCCACAAA | + |
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Preference number: 3 (lower is better) Translates to: VRYFLHLHFQCYPKSLPNMPYYT*QEECHK Trigger: TTTGTGGCATTCCTCCTGCAAGGTATAATATGGCAT...GTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCCACACCATAATGACATaGAAGTCCACATTTATATGC | + |
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Preference number: 3 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPHTIMT*KSTFIC Trigger: GCATATAAATGTGGACTTCAATGTCATTATGGTGTG...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CAA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCAGCACTTCTGAACATTaGTACACAGAGAGAAAAATG | + |
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Preference number: 3 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPSTSEH*YTERKM Trigger: CATTTTTCTCTCTGTGTACAAATGTTCAGAAGTGCT...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACAATGCTCCAAAGACATaGCAAGCATGGTCATCAATA | + |
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Preference number: 3 (lower is better) Translates to: VRYFLHLHFQCYPKSLPNNAPKT*QAWSSI Trigger: TATTGATGACCATGCTTGCAATGTCTTTGGAGCATT...GTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACAATGACTCTTGTAAGTaGTACTCTGGTATTCATCCA | + |
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Preference number: 3 (lower is better) Translates to: VRYFLHLHFQCYPKSLPNNDSCK*YSGIHP Trigger: TGGATGAATACCAGAGTACAACTTACAAGAGTCATT...GTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR TCA 90 bp | CTACCCACCCACTCCCACTTCTTGGCCCTGTTGTTCCCCTATACTGAGGCATATTTGAGCTCAAGTAGATaGCTAGGAACAATCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: LPTHSHFLALLFPYTEAYLSSSR*LGTIQT Trigger: TGTTTGGATTGTTCCTAGTCATCTACTTGAGCTCAA...ATATGCCTCAGTATAGGGGAACAACAGGGCCAAGAAGTGGGAGTGGGTGGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR TCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCCCCATCAGGATGAATTaGGTCACTGCTGTGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIPIRMN*VTAVRL Trigger: CAACCTCACAGCAGTGACTCAATTCATCCTGATGGG...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR TCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCCCACTGTGGTTAGAATaGTCATGCCCAAGTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIPLWLE*SCPSCQ Trigger: TTGGCAACTTGGGCATGATCATTCTAACCACAGTGG...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR TCA 90 bp | GTTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACATTGCCACCAGCACCTaGCACACCCTTTGCGACATG | + |
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Preference number: 4 (lower is better) Translates to: VRYFLHLHFQCYPKSLPNIATST*HTLCDM Trigger: CATGTCGCAAAGGGTGTGTCAGGTGCTGGTGGCAAT...GTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGTGGTTGGTTAATCAGCATAGGATGAGAAATTGTTTGAGACTATTTGAAGTGGGAACCACAGGTTaGGAAAGCCTTGCGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLWLVNQHRMRNCLRLFEVGTTG*ESLASA Trigger: GGCAGACGCAAGGCTTTCTCAACCTGTGGTTCCCAC...TTCAAATAGTCTCAAACAATTTCTCATCCTATGCTGATTAACCAACCACAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR GCA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCGCGGTCATAGGACATTaGAGACAGAATCAAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIAVIGH*RQNQKL Trigger: GAGCTTTTGATTCTGTCTGCAATGTCCTATGACCGC...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR CCA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCTGGGTGTTTGCAATTTaGAGTCCACTGTGGTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPWVFAI*SPLWLE Trigger: TTCTAACCACAGTGGACTCCAAATTGCAAACACCCA...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR GCA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCGATGAATTGAGTCACTaGTGTGAGGTTGTTCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPDELSH*CEVVLF Trigger: GAAAAGAACAACCTCACAGCAGTGACTCAATTCATC...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGTGGTTGGTTAATCAGCATAGGATGAGAAATTGTTTGAGACTATTTGAATGTCAAAAGAGTGACTaGACTGAGGCTGCACATACA | + |
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Preference number: 4 (lower is better) Translates to: LLWLVNQHRMRNCLRLFECQKSD*TEAAHT Trigger: TGTATGTGCAGCCTCAGTCCAGTCACTCTTTTGACA...TTCAAATAGTCTCAAACAATTTCTCATCCTATGCTGATTAACCAACCACAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR GCA 90 bp | GTTAGGTATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACGAAGAGAAACAAATGTaGAGTACAAATAGGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: VRYFLHLHFQCYPKSLPNEEKQM*STNRGL Trigger: CAATCCCCTATTTGTACTGCACATTTGTTTCTCTTC...GTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATACCTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| 3UTR CAA 72 bp | TTAAGTATACAAAACAGTGGAAGACAGAAGAAAGACTaGATGGTGAAAATCAAATGCTCCAAAGACATTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSIQNSGRQKKD*MVKIKCSKDIA Trigger: TGCAATGTCTTTGGAGCATTTGATTTTCACCATCAAGTCTTTCTTCTGTCTTCCACTGTTTTGTATACTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR CAA 90 bp | CTACCCACCCACTCCCACTTCTTGGCCCTGTTGTTCCCCTATACTGAGGCATATCAGGTTGAGAAAGCCTaGCGTCTGCCCTCAGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: LPTHSHFLALLFPYTEAYQVEKA*RLPSAE Trigger: CTCGGCTGAGGGCAGACGCAAGGCTTTCTCAACCTG...ATATGCCTCAGTATAGGGGAACAACAGGGCCAAGAAGTGGGAGTGGGTGGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR CAA 90 bp | CTACCCACCCACTCCCACTTCTTGGCCCTGTTGTTCCCCTATACTGAGGCATATAAAGTACATGGGTGTTaGCAATTTGGAGTCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: LPTHSHFLALLFPYTEAYKVHGC*QFGVHC Trigger: ACAGTGGACTCCAAATTGCAAACACCCATGTACTTT...ATATGCCTCAGTATAGGGGAACAACAGGGCCAAGAAGTGGGAGTGGGTGGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR CAA 90 bp | GTGGTCTATAAGCATGGAAACATGCTTCACATGCCCCTGATTCACATTGGAATCCACCTGACACACCCTTaGCGACATGATGACAGTGTA | + |
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Preference number: 5 (lower is better) Translates to: VVYKHGNMLHMPLIHIGIHLTHP*RHDDSV Trigger: TACACTGTCATCATGTCGCAAAGGGTGTGTCAGGTG...GATTCCAATGTGAATCAGGGGCATGTGAAGCATGTTTCCATGCTTATAGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS-3UTR CAA 90 bp | TATTTTCTTCATTTACATTTCCAGTGCTATCCCAAAAGTCTGCCAAACCCTCCCACCCATCAGGATGAATaGAGTCACTGCTGTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: YFLHLHFQCYPKSLPNPPTHQDE*SHCCEV Trigger: AACCTCACAGCAGTGACTCAATTCATCCTGATGGGT...GGGAGGGTTTGGCAGACTTTTGGGATAGCACTGGAAATGTAAATGAAGAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214141.2 |
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| CDS TCA 72 bp | TGGGTGTTTGCAATTTGGAGTCCACTGTGGTTAGAATaGTCATGCCCAAGTTGCCAAACATTGAGCTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: WVFAIWSPLWLE*SCPSCQTLSSS Trigger: ACTTGAGCTCAATGTTTGGCAACTTGGGCATGATCATTCTAACCACAGTGGACTCCAAATTGCAAACACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099877.2 ENSMUST00000214141.2 |
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