Pregenerated sensors for OLFR1085 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075176Ensembl transcript IDs: ENSMUST00000213279.2, ENSMUST00000214566.3
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTACTTATACATGGATGGGTCTCAAGGTGGGCCTGTTATTGGTTaGCATTCCTTCGGGTTCTGTTCCTTCTTTGTCCATCCCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: WYLYMDGSQGGPVIG*HSFGFCSFFVHPPP Trigger: GGGAGGGGGATGGACAAAGAAGGAACAGAACCCGAAGGAATGCCAACCAATAACAGGCCCACCTTGAGACCCATCCATGTATAAGTACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CCA 90 bp | CCTTACTCCCTCACTCAGGGAGCTTTGGGTTTAAACTTATTCTCCTaGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTGATCCTGACA | + |
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Preference number: 1 (lower is better) Translates to: PYSLTQGALGLNLFS*RSVSCLSLRHLILT Trigger: TGTCAGGATCAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACCCAAAGCTCCCTGAGTGAGGGAGTAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CCA 90 bp | AGAGGTTCTAAGGGTCCAGGTCAGATGACTCCGTTGGTCGTTGTATaGTGTTCCTATATTCTTCAGGGCTTTCAGTCCTGCCTCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: RGSKGPGQMTPLVVV*CSYILQGFQSCLQL Trigger: GAGTTGGAGGCAGGACTGAAAGCCCTGAAGAATATAGGAACACCATACAACGACCAACGGAGTCATCTGACCTGGACCCTTAGAACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR TCA 90 bp | CATCCTCTCCCACTGAGGCCACATAAGACATCACTGCTGGTAAACTaGTACCACAGACAAGCAACAGATTTTGGGACAGCCTCTGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: HPLPLRPHKTSLLVN*YHRQATDFGTASAS Trigger: TGAAGCAGAGGCTGTCCCAAAATCTGTTGCTTGTCTGTGGTATCAGTTTACCAGCAGTGATGTCTTATGTGGCCTCAGTGGGAGAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR GCA 90 bp | GATGATGATGATGATGTAGCCTTTGTTCTCTCTCCGCAGGAATTGTaGAGATCTTTCAGCCTGCTAGTTGAAATCTCAGGAAGAAAAGTG | + |
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Preference number: 1 (lower is better) Translates to: DDDDDVAFVLSPQEL*RSFSLLVEISGRKV Trigger: CACTTTTCTTCCTGAGATTTCAACTAGCAGGCTGAAAGATCTGCACAATTCCTGCGGAGAGAGAACAAAGGCTACATCATCATCATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR TCA 90 bp | CATAGAACTCAAAGACACACATTTGCGATCACTTGGCCCTCAATGTaGTACTACTTTCTACAGAGTGTACTCAAGTCCTGCTATTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: HRTQRHTFAITWPSM*YYFLQSVLKSCYLN Trigger: ATTTAAATAGCAGGACTTGAGTACACTCTGTAGAAAGTAGTATCACATTGAGGGCCAAGTGATCGCAAATGTGTGTCTTTGAGTTCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR GCA 90 bp | AGTTTCTCTTGTGCACAAACATCCCATGGATTACACAAGATCAGATaGTTCATTATCTTTTGCCTACTGAAAGGTCAAATATGTACAGTG | + |
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Preference number: 1 (lower is better) Translates to: SFSCAQTSHGLHKIR*FIIFCLLKGQICTV Trigger: CACTGTACATATTTGACCTTTCAGTAGGCAAAAGATAATGAAGCATCTGATCTTGTGTAATCCATGGGATGTTTGTGCACAAGAGAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATGTACCCTTGTGGTTGTaGAGGGAGGGGGTAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LGILIPPLRDLPGYRRWHVPLWL*REGVGE Trigger: CTCCCCTACCCCCTCCCTCCACAACCACAAGGGTAC...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATACCCATGTTGACTCCTaGGATCCTCCCCCAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYTHVDS*DPPPTQ Trigger: TTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGT...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTGTATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATGTACCCTTGTGGTTGTaGAGGGAGGGGGTAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PCCIMYLQKAHPLPLRPHVPLWL*REGVGE Trigger: CTCCCCTACCCCCTCCCTCCACAACCACAAGGGTAC...ATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGATACAGCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATATGTCTTGTTCCTTCTaGGGGTTAAAAGCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYMSCSF*GLKATG Trigger: GCCAGTGGCTTTTAACCCTCAGAAGGAACAAGACAT...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCTGCCTGGAGCCTGCTaGCCTGGAGTGCATTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: VTHVDSWDPPPTQVSELPLPGAC*PGVHLN Trigger: GTTTAAATGCACTCCAGGCCAGCAGGCTCCAGGCAG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTTGATGCCTCAGTTTGTGAGGATGCTGGAACAGTGGGGTAGCAGTGTGATTCTCCCTTCCCCCTaGAGGAAAGCAAGAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: RGLMPQFVRMLEQWGSSVILPSP*RKARAL Trigger: AAGTGCTCTTGCTTTCCTTCAGGGGGAAGGGAGAAT...CACACTGCTACCCCACTGTTCCAGCATCCTCACAAACTGAGGCATCAAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATATGTCTTGTTCCTTCTaGGGGTTAAAAGCCACTGGC | + |
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Preference number: 2 (lower is better) Translates to: LGILIPPLRDLPGYRRWHMSCSF*GLKATG Trigger: GCCAGTGGCTTTTAACCCTCAGAAGGAACAAGACAT...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCAGTGTGTGAGAGGGTaGAGGAGTACCCTTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: VTHVDSWDPPPTQVSELPQCVRG*RSTLVV Trigger: AACCACAAGGGTACTCCTCCACCCTCTCACACACTG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 90 bp | CTGGTACTTATACATGGATGGGTCTCAAGGTGGGCCTGTTATTGGTaGGCATTCCTTCGGGTTCTGTTCCTTCTTTGTCCATCCCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LVLIHGWVSRWACYW*AFLRVLFLLCPSPS Trigger: GGAGGGGGATGGACAAAGAAGGAACAGAACCCGAAGGAATGCCAACCAATAACAGGCCCACCTTGAGACCCATCCATGTATAAGTACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCATGGGGTAGCAGTGTGTaGGAGGGTGGAGGAGTACCC | + |
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Preference number: 2 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSWGSSV*EGGGVP Trigger: GGGTACTCCTCCACCCTCTCACACACTGCTACCCCA...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATTCAAAGACACACATTTaGGATCACTTGGCCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYSKTHI*DHLALN Trigger: ATTGAGGGCCAAGTGATCGCAAATGTGTGTCTTTGA...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 90 bp | TCAGGGAGCTTTGGGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTaGCTTGTCTCTCAGACACCTGATCCTGACACACCCAGTCCCTTA | + |
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Preference number: 2 (lower is better) Translates to: SGSFGFKLILLALCL*LVSQTPDPDTPSPL Trigger: TAAGGGACTGGGTGTGTCAGGATCAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACCCAAAGCTCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATATTCAAAGTCTCTTTTaGTTTCCCAGGCCTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYIQSLF*FPRPHR Trigger: TCTATGAGGCCTGGGAAAGCAAAAGAGACTTTGAAT...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCTTGATGCCTCAGTTTGTGAGGATGCTGGAACAGTGGGGTAGCAGTGTGAGTGTTGTAGGGATATaGGGCAAAAGGATGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: RGLMPQFVRMLEQWGSSVSVVGI*GKRMKG Trigger: TCCCTTCATCCTTTTGCCCCATATCCCTACAACACT...CACACTGCTACCCCACTGTTCCAGCATCCTCACAAACTGAGGCATCAAGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | GGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTGTGGAGCCTGCTGGCCTaGAGTGCATTTAAACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GLNLFSWRSVSCLSLRHLWSLLA*SAFKQD Trigger: GTCCTGTTTAAATGCACTCCAGGCCAGCAGGCTCCA...CAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCTTGATGCCTCAGTTTGTGAGGATGCTGGAACAGTGGGGTAGCAGTGTGTCAAAGACACACATTTaGGATCACTTGGCCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: RGLMPQFVRMLEQWGSSVSKTHI*DHLALN Trigger: ATTGAGGGCCAAGTGATCGCAAATGTGTGTCTTTGA...CACACTGCTACCCCACTGTTCCAGCATCCTCACAAACTGAGGCATCAAGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATTTGTGGGAGGCAACTTaGAAATGGATATCATTTGAA | + |
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Preference number: 2 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYLWEAT*KWISFE Trigger: TTCAAATGATATCCATTTCCAAGTTGCCTCCCACAA...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGACCCATGTTGACTCCTaGGATCCTCCCCCAACCCAA | + |
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Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKTHVDS*DPPPTQ Trigger: TTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGT...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATGTAAAAAGTTTCCTATaGAAGCTCTCTATAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LGILIPPLRDLPGYRRWHVKSFL*KLSIGE Trigger: TTCCCCTATAGAGAGCTTTCATAGGAAACTTTTTAC...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATAGTGTACTCAAGTCCTaGTATTTAAATTCTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGILIPPLRDLPGYRRWHSVLKS*YLNSPF Trigger: GAAGGGAGAATTTAAATAGCAGGACTTGAGTACACT...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTGTCTCCGCAGGAATTGTaGAGATCTTTCAGCCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: GLNLFSWRSVSCLSLRHLSPQEL*RSFSLL Trigger: TAGCAGGCTGAAAGATCTGCACAATTCCTGCGGAGA...CAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGAATCTGCCTGGAGCCTaGTGGCCTGGAGTGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKNLPGA*WPGVHL Trigger: TAAATGCACTCCAGGCCAGCAGGCTCCAGGCAGATT...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATGAAAAATGCAGTCTATaGATGAAACACAACAATAGC | + |
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Preference number: 2 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYEKCSL*MKHNNS Trigger: GCTATTGTTGTGTTTCATCCATAGACTGCATTTTTC...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTGTATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAGTGTTGTAGGGATATaGGGCAAAAGGATGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PCCIMYLQKAHPLPLRPHSVVGI*GKRMKG Trigger: TCCCTTCATCCTTTTGCCCCATATCCCTACAACACT...ATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGATACAGCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGAAGATTGTCTTAATCTaGCTGGAGCCTGCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKKIVLI*LEPAGL Trigger: CAGGCCAGCAGGCTCCAGGCAGATTAAGACAATCTT...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTCTGCCTGGAGCCTGCTaGCCTGGAGTGCATTTAAAC | + |
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Preference number: 2 (lower is better) Translates to: ILGQPLLHLLRILSCISALPGAC*PGVHLN Trigger: GTTTAAATGCACTCCAGGCCAGCAGGCTCCAGGCAG...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTGAAGCCTGATGGTCTCTaGAACTCAAGCTTTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: GLNLFSWRSVSCLSLRHLKPDGL*NSSFLT Trigger: AGTTAGAAAGCTTGAGTTTCAGAGACCATCAGGCTT...CAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | TTAAGTGTCAGTACTAAGATTGTCTTAATCTGCCTGGAGCCTGCTGGCCTGGAGAAGCCTGATGGTCTCTaGAACTCAAGCTTTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: LSVSTKIVLICLEPAGLEKPDGL*NSSFLT Trigger: AGTTAGAAAGCTTGAGTTTCAGAGACCATCAGGCTT...CTCCAGGCCAGCAGGCTCCAGGCAGATTAAGACAATCTTAGTACTGACACTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCAGTACTTATACATGGATaGGTCTCAAGGTGGGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSVLIHG*VSRWAC Trigger: ACAGGCCCACCTTGAGACCCATCCATGTATAAGTAC...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTATTCTCCCTTCCCCCTaGAGGAAAGCAAGAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: ILGQPLLHLLRILSCISAILPSP*RKARAL Trigger: AAGTGCTCTTGCTTTCCTTCAGGGGGAAGGGAGAAT...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCTGTATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAAATGCTAAACCGGTaGAAGGAAAAATGCAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: PCCIMYLQKAHPLPLRPHKMLNR*KEKCSL Trigger: TAGACTGCATTTTTCCTTTCACCGGTTTAGCATTTT...ATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGATACAGCAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | GGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTGATTCAAAGTCTCTTTTaGTTTCCCAGGCCTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: GLNLFSWRSVSCLSLRHLIQSLF*FPRPHR Trigger: TCTATGAGGCCTGGGAAAGCAAAAGAGACTTTGAAT...CAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGTGGAGCCTGCTGGCCTaGAGTGCATTTAAACAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLHLLRILSCISATYVSGWSLLA*SAFKQD Trigger: GTCCTGTTTAAATGCACTCCAGGCCAGCAGGCTCCA...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTGTATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATTTGGTTCAAAAGTTTTaGGTGGCTTGGTATCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: PCCIMYLQKAHPLPLRPHLVQKF*VAWYPY Trigger: ATAAGGATACCAAGCCACCCAAAACTTTTGAACCAA...ATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGATACAGCAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGGGATGGGTCTCAAGGTaGGCCTGTTATTGGTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LLHLLRILSCISATYVSGGWVSR*ACYWLA Trigger: TGCCAACCAATAACAGGCCCACCTTGAGACCCATCC...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGGATAGTTCCTGGGAATaGATAACACATGGCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKDSSWE*ITHGKF Trigger: GAACTTGCCATGTGTTATGCATTCCCAGGAACTATC...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR-3UTR GCA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTTCTCCGCAGGAATTGTaGAGATCTTTCAGCCTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: ILGQPLLHLLRILSCISASPQEL*RSFSLL Trigger: TAGCAGGCTGAAAGATCTGCACAATTCCTGCGGAGA...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTGGAGGCAACTTGGAAATaGATATCATTTGAAATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GLNLFSWRSVSCLSLRHLEATWK*ISFEMW Trigger: CCACATTTCAAATGATATCCATTTCCAAGTTGCCTC...CAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGTGTCAGTACTAAGATTGTCTTAATCTGCCTGGAGCCTGCTGGCCTGGAGAGAAATGGATTGTCATaGCTATATTTGTATGCAACC | + |
|
Preference number: 2 (lower is better) Translates to: LSVSTKIVLICLEPAGLERNGLS*LYLYAT Trigger: GGTTGCATACAAATATAGCCATGACAATCCATTTCT...CTCCAGGCCAGCAGGCTCCAGGCAGATTAAGACAATCTTAGTACTGACACTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR TCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGCCTCTGACTTTTATATaGGGTTGGACATATTTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKPLTFI*GWTYFW Trigger: CCAAAAATATGTCCAACCTCATATAAAAGTCAGAGG...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGTTGTGGGAGGCAACTTaGAAATGGATATCATTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKLWEAT*KWISFE Trigger: TTCAAATGATATCCATTTCCAAGTTGCCTCCCACAA...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGTTGGTTCAAAAGTTTTaGGTGGCTTGGTATCCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: VQPINTHWLVALSLRGSKLVQKF*VAWYPY Trigger: ATAAGGATACCAAGCCACCCAAAACTTTTGAACCAA...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCATATGTTTTAGTCAGCTaGTGGGTAGAACCTTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSYVLVS*WVEPFK Trigger: TTTGAAAGGTTCTACCCACCAGCTGACTAAAACATA...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTTTTCAGCCTGCTAGTTaGAATCTCAGGAAGAAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILGQPLLHLLRILSCISAFQPAS*NLRKKS Trigger: ACTTTTCTTCCTGAGATTTCAACTAGCAGGCTGAAA...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGGATAGTTCCTGGGAATaGATAACACATGGCAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLHLLRILSCISATYVSGDSSWE*ITHGKF Trigger: GAACTTGCCATGTGTTATGCATTCCCAGGAACTATC...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCAAGAAATGGATTGTCATaGCTATATTTGTATGCAACC | + |
|
Preference number: 2 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSRNGLS*LYLYAT Trigger: GGTTGCATACAAATATAGCCATGACAATCCATTTCT...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTGTAAAAAGTTTCCTATaGAAGCTCTCTATAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ILGQPLLHLLRILSCISAVKSFL*KLSIGE Trigger: TTCCCCTATAGAGAGCTTTCATAGGAAACTTTTTAC...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACTCTGTACAATGTTTaGCTGTGGATATATCCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: ILGQPLLHLLRILSCISATLYNV*LWIYPY Trigger: ATAGGGATATATCCACAGTCAAACATTGTACAGAGT...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR CAA 90 bp | TTGAAGCCACCTACCTCTGACTTTTATATGAGGTTGGACATATTTTaGGTATTAAGTGTCAGTACTAAGATTGTCTTAATCTGCCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LKPPTSDFYMRLDIF*VLSVSTKIVLICLE Trigger: CTCCAGGCAGATTAAGACAATCTTAGTACTGACACTTAATACCAAAAATATGTCCAACCTCATATAAAAGTCAGAGGTAGGTGGCTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGCCTCTGACTTTTATATaGGGTTGGACATATTTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLHLLRILSCISATYVSGPLTFI*GWTYFW Trigger: CCAAAAATATGTCCAACCTCATATAAAAGTCAGAGG...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGGAGGCAACTTGGAAATaGATATCATTTGAAATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLHLLRILSCISATYVSGEATWK*ISFEMW Trigger: CCACATTTCAAATGATATCCATTTCCAAGTTGCCTC...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR CAA 90 bp | ACAAACATCCCATGGATTACACAAGATCAGATGCTTCATTATCTTTaGCCTACTGAAAGGTCAAATATGTACAGTGAGCAGTTTCATATA | + |
|
Preference number: 2 (lower is better) Translates to: TNIPWITQDQMLHYL*PTERSNMYSEQFHI Trigger: TATATGAAACTGCTCACTGTACATATTTGACCTTTCAGTAGGCAAAAGATAATGAAGCATCTGATCTTGTGTAATCCATGGGATGTTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATGGTGGAGGAGTACCCTaGTGGTTGTGGAGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LGILIPPLRDLPGYRRWHGGGVP*WLWREG Trigger: CCCCTCCCTCCACAACCACAAGGGTACTCCTCCACC...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCTGGCGCTCTGTCTCTaGCTTGTCTCTCAGACACCT | + |
|
Preference number: 3 (lower is better) Translates to: VTHVDSWDPPPTQVSELPLALCL*LVSQTP Trigger: AGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCAGGTGGAGGAGTACCCTaGTGGTTGTGGAGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSGGGVP*WLWREG Trigger: CCCCTCCCTCCACAACCACAAGGGTACTCCTCCACC...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCGCTCTGTCTCTTGCTaGTCTCTCAGACACCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: VTHVDSWDPPPTQVSELPRSVSC*SLRHLI Trigger: GATCAGGTGTCTGAGAGACAAGCAAGAGACAGAGCG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCTTCGGGTTCCATATCCACTGTTAGACATCTaGGCTAAGGTTACCCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: PPLRDLPGYRRWHLRVPYPLLDI*AKVTHV Trigger: AACATGGGTAACCTTAGCCAAGATGTCTAACAGTGG...ATATGGAACCCGAAGATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR CCA 72 bp | CTCACTCAGGGAGCTTTGGGTTTAAACTTATTCTCCTaGCGCTCTGTCTCTTGCTTGTCTCTCAGACACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LTQGALGLNLFS*RSVSCLSLRHL Trigger: CAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACCCAAAGCTCCCTGAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCTCACTCAGGGAGCTTaGGGTTTAAACTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTHVDSWDPPPTQVSELPLTQGA*GLNLFS Trigger: GGAGAATAAGTTTAAACCCAAAGCTCCCTGAGTGAG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR TCA 72 bp | CCACTGAGGCCACATAAGACATCACTGCTGGTAAACTaGTACCACAGACAAGCAACAGATTTTGGGACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PLRPHKTSLLVN*YHRQATDFGTA Trigger: GGCTGTCCCAAAATCTGTTGCTTGTCTGTGGTATCAGTTTACCAGCAGTGATGTCTTATGTGGCCTCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGCGCTCTGTCTCTTGCTaGTCTCTCAGACACCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: VQPINTHWLVALSLRGSKRSVSC*SLRHLI Trigger: GATCAGGTGTCTGAGAGACAAGCAAGAGACAGAGCG...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTTGGACCTGCAGAGGCTaGATGCCTCAGTTTGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ILGQPLLHLLRILSCISAWTCRG*MPQFVR Trigger: CCTCACAAACTGAGGCATCAAGCCTCTGCAGGTCCA...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR CCA 72 bp | CTTATACATGGATGGGTCTCAAGGTGGGCCTGTTATTaGTTGGCATTCCTTCGGGTTCTGTTCCTTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LIHGWVSRWACY*LAFLRVLFLLC Trigger: ACAAAGAAGGAACAGAACCCGAAGGAATGCCAACCAATAACAGGCCCACCTTGAGACCCATCCATGTATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTGGTTCTGTTCCTTCTTaGTCCATCCCCCTCCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILGQPLLHLLRILSCISAGSVPS*SIPLPV Trigger: AACAGGGAGGGGGATGGACAAAGAAGGAACAGAACC...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR TCA 72 bp | GGACACAGAGTAGGACTCTGGTGTGGCTTTAAAGCCTaGTGGTCTCTGAAACTCAAGCTTTCTAACTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: GHRVGLWCGFKA*WSLKLKLSNCT Trigger: AGTACAGTTAGAAAGCTTGAGTTTCAGAGACCATCAGGCTTTAAAGCCACACCAGAGTCCTACTCTGTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR GCA 72 bp | GATGATGTAGCCTTTGTTCTCTCTCCGCAGGAATTGTaGAGATCTTTCAGCCTGCTAGTTGAAATCTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: DDVAFVLSPQEL*RSFSLLVEISG Trigger: TCCTGAGATTTCAACTAGCAGGCTGAAAGATCTGCACAATTCCTGCGGAGAGAGAACAAAGGCTACATCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGCTCACTCAGGGAGCTTaGGGTTTAAACTTATTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VQPINTHWLVALSLRGSKLTQGA*GLNLFS Trigger: GGAGAATAAGTTTAAACCCAAAGCTCCCTGAGTGAG...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGATAGAAAGCCTGCCTTaGTACACCATAGAAAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: VQPINTHWLVALSLRGSKIESLP*YTIEKQ Trigger: CTGTTTTTCTATGGTGTACAAAGGCAGGCTTTCTAT...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCAAACTCTGTACAATGTTaGACTGTGGATATATCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSNSVQC*TVDISL Trigger: TAGGGATATATCCACAGTCAAACATTGTACAGAGTT...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGAACTCTGTACAATGTTaGACTGTGGATATATCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VQPINTHWLVALSLRGSKNSVQC*TVDISL Trigger: TAGGGATATATCCACAGTCAAACATTGTACAGAGTT...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTGGGACAGCCTCTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTATAGAAAGCCTGCCTTaGTACACCATAGAAAAACAG | + |
|
Preference number: 3 (lower is better) Translates to: ILGQPLLHLLRILSCISAIESLP*YTIEKQ Trigger: CTGTTTTTCTATGGTGTACAAAGGCAGGCTTTCTAT...AGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAGAGGCTGTCCCAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR GCA 72 bp | TGTGCACAAACATCCCATGGATTACACAAGATCAGATaGTTCATTATCTTTTGCCTACTGAAAGGTCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: CAQTSHGLHKIR*FIIFCLLKGQI Trigger: TATTTGACCTTTCAGTAGGCAAAAGATAATGAAGCATCTGATCTTGTGTAATCCATGGGATGTTTGTGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR TCA 72 bp | TCCCAAGATATTTACTGGATTGAAGCCACCTACCTCTaGCTTTTATATGAGGTTGGACATATTTTTGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SQDIYWIEATYL*LLYEVGHIFGI Trigger: AATACCAAAAATATGTCCAACCTCATATAAAAGTCAGAGGTAGGTGGCTTCAATCCAGTAAATATCTTGGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| 3UTR CCA 72 bp | GTGAGTAAACATGTATATCCATTAGAAGTATTTATCTaGCTAAACATTCATCACCTGTCACAGTTCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSKHVYPLEVFI*LNIHHLSQFHK Trigger: CTTGTGGAACTGTGACAGGTGATGAATGTTTAGCCAGATAAATACTTCTAATGGATATACATGTTTACTCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATCCAAAGAGTGGGGCCTaGAGCTCAGGACGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGILIPPLRDLPGYRRWHPKSGA*SSGRSV Trigger: CACTGACCGTCCTGAGCTGCAGGCCCCACTCTTTGG...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTGATGCCTCAGTTTGTGAGGATGCTGGAACAGTGGGGTAGCAGTGTGGTGAGACCCACAGGTTaGAAAAGCCTTGCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLMPQFVRMLEQWGSSVVRPTG*KSLASA Trigger: GGCAGATGCAAGGCTTTTTCAACCTGTGGGTCTCAC...CACACTGCTACCCCACTGTTCCAGCATCCTCACAAACTGAGGCATCAAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| CDS-3UTR GCA 90 bp | TTAAGTGTCAGTACTAAGATTGTCTTAATCTGCCTGGAGCCTGCTGGCCTGGAGCCAAAGAGTGGGGCCTaGAGCTCAGGACGGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSTKIVLICLEPAGLEPKSGA*SSGRSV Trigger: CACTGACCGTCCTGAGCTGCAGGCCCCACTCTTTGG...CTCCAGGCCAGCAGGCTCCAGGCAGATTAAGACAATCTTAGTACTGACACTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCTGTATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATGTGAGACCCACAGGTTaGAAAAGCCTTGCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCCIMYLQKAHPLPLRPHVRPTG*KSLASA Trigger: GGCAGATGCAAGGCTTTTTCAACCTGTGGGTCTCAC...ATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGATACAGCAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| CDS-3UTR GCA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATAGGTTGAAAAAGCCTTaGATCTGCCTGCAGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGILIPPLRDLPGYRRWHRLKKP*ICLQQI Trigger: AATCTGCTGCAGGCAGATGCAAGGCTTTTTCAACCT...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
||
| CDS-3UTR GCA 90 bp | AGAGGCTTGATGCCTCAGTTTGTGAGGATGCTGGAACAGTGGGGTAGCAGTGTGAGGTTGAAAAAGCCTTaGATCTGCCTGCAGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RGLMPQFVRMLEQWGSSVRLKKP*ICLQQI Trigger: AATCTGCTGCAGGCAGATGCAAGGCTTTTTCAACCT...CACACTGCTACCCCACTGTTCCAGCATCCTCACAAACTGAGGCATCAAGCCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | GGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTTGCTaGTCTCTCAGACACCTGATCCTGACACACCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GLNLFSWRSVSC*SLRHLILTHPV Trigger: GACTGGGTGTGTCAGGATCAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | TTTGGGTTTAAACTTATTCTCCTGGCGCTCTGTCTCTaGCTTGTCTCTCAGACACCTGATCCTGACACACCC | + |
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Preference number: 4 (lower is better) Translates to: FGFKLILLALCL*LVSQTPDPDTP Trigger: GGGTGTGTCAGGATCAGGTGTCTGAGAGACAAGCAAGAGACAGAGCGCCAGGAGAATAAGTTTAAACCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | CCTAGAGATTTCCCTTACTCCCTCACTCAGGGAGCTTaGGGTTTAAACTTATTCTCCTGGCGCTCTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRDFPYSLTQGA*GLNLFSWRSVS Trigger: AGAGACAGAGCGCCAGGAGAATAAGTTTAAACCCAAAGCTCCCTGAGTGAGGGAGTAAGGGAAATCTCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | TTAAGAGGTTCTAAGGGTCCAGGTCAGATGACTCCGTaGGTCGTTGTATGGTGTTCCTATATTCTTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LRGSKGPGQMTP*VVVWCSYILQG Trigger: GCCCTGAAGAATATAGGAACACCATACAACGACCAACGGAGTCATCTGACCTGGACCCTTAGAACCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR TCA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCCAACATATTCTTTGTaGCATGATGACAGTATAGAG | + |
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Preference number: 4 (lower is better) Translates to: VTHVDSWDPPPTQVSELPPTYSL*HDDSIE Trigger: CTCTATACTGTCATCATGTCACAAAGAATATGTTGG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR TCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGTCAGTCTCAAATGTTTaGCTGGACTTGGGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: VQPINTHWLVALSLRGSKSVSNV*LDLGCT Trigger: TGTGCAGCCCAAGTCCAGTCAAACATTTGAGACTGA...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | GCTTTCCCAGGCCTCATAGAACTCAAAGACACACATTaGCGATCACTTGGCCCTCAATGTGATACTACTTTC | + |
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Preference number: 4 (lower is better) Translates to: AFPGLIELKDTH*RSLGPQCDTTF Trigger: GAAAGTAGTATCACATTGAGGGCCAAGTGATCGCAAATGTGTGTCTTTGAGTTCTATGAGGCCTGGGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | TTATTGGTTGGCATTCCTTCGGGTTCTGTTCCTTCTTaGTCCATCCCCCTCCCTGTTTGTTGTTGTTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLVGIPSGSVPS*SIPLPVCCCFC Trigger: ACAAAAACAACAACAAACAGGGAGGGGGATGGACAAAGAAGGAACAGAACCCGAAGGAATGCCAACCAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR CCA 90 bp | GTCCAGCCCATAAATACTCATTGGTTGGTGGCTCTGTCTTTAAGAGGTTCTAAGTCTCAAATGTTTGACTaGACTTGGGCTGCACATACA | + |
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Preference number: 4 (lower is better) Translates to: VQPINTHWLVALSLRGSKSQMFD*TWAAHT Trigger: TGTATGTGCAGCCCAAGTCCAGTCAAACATTTGAGA...CTTAGAACCTCTTAAAGACAGAGCCACCAACCAATGAGTATTTATGGGCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR CCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGTCTCAAATGTTTGACTaGACTTGGGCTGCACATACA | + |
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Preference number: 4 (lower is better) Translates to: LLHLLRILSCISATYVSGSQMFD*TWAAHT Trigger: TGTATGTGCAGCCCAAGTCCAGTCAAACATTTGAGA...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | CCATGGATTACACAAGATCAGATGCTTCATTATCTTTaGCCTACTGAAAGGTCAAATATGTACAGTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PWITQDQMLHYL*PTERSNMYSEQ Trigger: CTGCTCACTGTACATATTTGACCTTTCAGTAGGCAAAAGATAATGAAGCATCTGATCTTGTGTAATCCATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| 3UTR CAA 72 bp | AACTCTTCCATAAAGTCCCTGAACTCTGTACAATGTTaGACTGTGGATATATCCCTATGTTTTAGTCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSSIKSLNSVQC*TVDISLCFSQL Trigger: CAGCTGACTAAAACATAGGGATATATCCACAGTCAAACATTGTACAGAGTTCAGGGACTTTATGGAAGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR TCA 90 bp | CTGCTTCATTTGTTAAGGATACTGAGCTGTATATCTGCTACATATGTATCTGGGCCAACATATTCTTTGTaGCATGATGACAGTATAGAG | + |
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Preference number: 4 (lower is better) Translates to: LLHLLRILSCISATYVSGPTYSL*HDDSIE Trigger: CTCTATACTGTCATCATGTCACAAAGAATATGTTGG...CCCAGATACATATGTAGCAGATATACAGCTCAGTATCCTTAACAAATGAAGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR CAA 90 bp | CTTGGTATCCTTATCCCTCCACTGAGGGACCTGCCTGGCTATAGGAGGTGGCATATCAGTCTCAAATGTTaGACTGGACTTGGGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LGILIPPLRDLPGYRRWHISLKC*TGLGLH Trigger: GTGCAGCCCAAGTCCAGTCAAACATTTGAGACTGAT...ATGCCACCTCCTATAGCCAGGCAGGTCCCTCAGTGGAGGGATAAGGATACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR CAA 90 bp | GTTACCCATGTTGACTCCTGGGATCCTCCCCCAACCCAAGTTTCTGAACTTCCTCAGGTTGAAAAAGCCTaGCATCTGCCTGCAGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: VTHVDSWDPPPTQVSELPQVEKA*HLPAAD Trigger: ATCTGCTGCAGGCAGATGCAAGGCTTTTTCAACCTG...AGGAAGTTCAGAAACTTGGGTTGGGGGAGGATCCCAGGAGTCAACATGGGTAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR CAA 90 bp | CCCTGCTGTATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATCAGGTTGAAAAAGCCTaGCATCTGCCTGCAGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: PCCIMYLQKAHPLPLRPHQVEKA*HLPAAD Trigger: ATCTGCTGCAGGCAGATGCAAGGCTTTTTCAACCTG...ATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGATACAGCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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| CDS-3UTR CAA 90 bp | ATCATGTATCTGCAAAAAGCACATCCTCTCCCACTGAGGCCACATAAGACATCAATCAGTCTCAAATGTTaGACTGGACTTGGGCTGCAC | + |
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Preference number: 5 (lower is better) Translates to: IMYLQKAHPLPLRPHKTSISLKC*TGLGLH Trigger: GTGCAGCCCAAGTCCAGTCAAACATTTGAGACTGAT...TGATGTCTTATGTGGCCTCAGTGGGAGAGGATGTGCTTTTTGCAGATACATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213279.2 ENSMUST00000214566.3 |
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