Pregenerated sensors for OLFR1080 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000110912

Ensembl transcript IDs: ENSMUST00000213185.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TGGATTAGCACCAGAATTCAAGTAGATAATACAAGTTTCACACACTaGGGCTTGTTCTACATTCCAGAGGAAAGTAAAATGGTGTATATT	+
Preference number: 1 (lower is better) Translates to: WISTRIQVDNTSFTH*GLFYIPEESKMVYI Trigger: AATATACACCATTTTACTTTCCTCTGGAATGTAGAACAAGCCCCAGTGTGTGAAACTTGTATTATCTACTTGAATTCTGGTGCTAATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
3UTR-3UTR TCA 90 bp	ACAAGTTTCACACACTGGGGCTTGTTCTACATTCCAGAGGAAAGTAAAATGGTGTATTCAAGCCTGCTTTaGAGGATTTGTATGGCATTT	+
Preference number: 2 (lower is better) Translates to: TSFTHWGLFYIPEESKMVYSSLL*RICMAF Trigger: AAATGCCATACAAATCCTTCAAAGCAGGCTTGAATA...CACCATTTTACTTTCCTCTGGAATGTAGAACAAGCCCCAGTGTGTGAAACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
3UTR CAA 90 bp	AGCACCAGAATTCAAGTAGATAATACAAGTTTCACACACTGGGGCTaGTTCTACATTCCAGAGGAAAGTAAAATGGTGTATATTCAAGCC	+
Preference number: 2 (lower is better) Translates to: STRIQVDNTSFTHWG*FYIPEESKMVYIQA Trigger: GGCTTGAATATACACCATTTTACTTTCCTCTGGAATGTAGAACAAGCCCCAGTGTGTGAAACTTGTATTATCTACTTGAATTCTGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
3UTR-3UTR CCA 90 bp	CATACTAAAATTTCTCTCTCTCATGCACAAGATGCATCAACAGATATACCTTCACAGAGGAAAGTAAAATaGTGTATATTCAAGCCTGCT	+
Preference number: 2 (lower is better) Translates to: HTKISLSHAQDASTDIPSQRKVK*CIFKPA Trigger: AGCAGGCTTGAATATACACCATTTTACTTTCCTCTG...TGAAGGTATATCTGTTGATGCATCTTGTGCATGAGAGAGAGAAATTTTAGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
3UTR CCA 72 bp	ACTGGGGCTTGTTCTACATTCCAGAGGAAAGTAAAATaGTGTATATTCAAGCCTGCTTTGAAGGATTTGTAT	+
Preference number: 3 (lower is better) Translates to: TGACSTFQRKVK*CIFKPALKDLY Trigger: ATACAAATCCTTCAAAGCAGGCTTGAATATACACCATTTTACTTTCCTCTGGAATGTAGAACAAGCCCCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
3UTR CCA 72 bp	ACCAGAATTCAAGTAGATAATACAAGTTTCACACACTaGGGCTTGTTCTACATTCCAGAGGAAAGTAAAATG	+
Preference number: 3 (lower is better) Translates to: TRIQVDNTSFTH*GLFYIPEESKM Trigger: CATTTTACTTTCCTCTGGAATGTAGAACAAGCCCCAGTGTGTGAAACTTGTATTATCTACTTGAATTCTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
CDS-3UTR GCA 90 bp	ATTCCAGAGGAAAGTAAAATGGTGTATATTCAAGCCTGCTTTGAAGGATTTGTAGCGGTCATAGGACATTaGAGACAGAATAAAAAGCTC	+
Preference number: 4 (lower is better) Translates to: IPEESKMVYIQACFEGFVAVIGH*RQNKKL Trigger: GAGCTTTTTATTCTGTCTGCAATGTCCTATGACCGC...TACAAATCCTTCAAAGCAGGCTTGAATATACACCATTTTACTTTCCTCTGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213185.2
3UTR CAA 72 bp	ATTCAAGTAGATAATACAAGTTTCACACACTGGGGCTaGTTCTACATTCCAGAGGAAAGTAAAATGGTGTAT	+
Preference number: 4 (lower is better) Translates to: IQVDNTSFTHWG*FYIPEESKMVY Trigger: ATACACCATTTTACTTTCCTCTGGAATGTAGAACAAGCCCCAGTGTGTGAAACTTGTATTATCTACTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213185.2

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