Pregenerated sensors for OLFR1065 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000111306Ensembl transcript IDs: ENSMUST00000213789.3, ENSMUST00000216162.3, ENSMUST00000217586.3
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTAGTTaGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATA | + |
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Preference number: 1 (lower is better) Translates to: ESCVSGCTCSRGWPS*PSIRGEALGLGKII Trigger: TATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGCCAGGCAGGAGTGGGTAGGTTaGGGAACAGGGCAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: ERPLVLGRLYAPVQENARQEWVG*GTGQVD Trigger: ATCCACCTGCCCTGTTCCCCAACCTACCCACTCCTG...CCTGGCATTCTCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTGCCAGGAAGCAGGAGTaGGTAGGTTGGGGAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: PSNPESCVSGCTCSRGWPARKQE*VGWGTG Trigger: CCCTGTTCCCCAACCTACCCACTCCTGCTTCCTGGC...AGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTCAGGAGTGGGTAGGTTaGGGAACAGGGCAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PSNPESCVSGCTCSRGWPQEWVG*GTGQVD Trigger: ATCCACCTGCCCTGTTCCCCAACCTACCCACTCCTG...AGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR CCA 90 bp | TCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGCCAGGAAGCAGGAGTaGGTAGGTTGGGGAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: SIRGEALGLGKIICSSTGARKQE*VGWGTG Trigger: CCCTGTTCCCCAACCTACCCACTCCTGCTTCCTGGC...TCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGATTTACACGCAAAGCAGAGTACTCAGTTTTCTCTCACTGTGGTCAACTCAGGAGTGGGTAGGTTaGGGAACAGGGCAGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: IVIYTQSRVLSFLSLWSTQEWVG*GTGQVD Trigger: ATCCACCTGCCCTGTTCCCCAACCTACCCACTCCTG...AGTTGACCACAGTGAGAGAAAACTGAGTACTCTGCTTTGCGTGTAAATCACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR GCA 90 bp | GGATGGCCTAGTTGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATACCATTTAAGCCCTaGTCTATAGCTCCTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: GWPSWPSIRGEALGLGKIIPFKP*SIAPVL Trigger: TAGAACAGGAGCTATAGAGCAGGGCTTAAATGGTAT...AATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR GCA 90 bp | TCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAATACCATTTAAGCCCTaGTCTATAGCTCCTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SIRGEALGLGKIICSSTGIPFKP*SIAPVL Trigger: TAGAACAGGAGCTATAGAGCAGGGCTTAAATGGTAT...TCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCCCTCTAAGATAAACAACAATATGAACAACCTAGTAATCCTGAGAGTTATACCATTTAAGCCCTaGTCTATAGCTCCTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LQPSKINNNMNNLVILRVIPFKP*SIAPVL Trigger: TAGAACAGGAGCTATAGAGCAGGGCTTAAATGGTAT...AACTCTCAGGATTACTAGGTTGTTCATATTGTTGTTTATCTTAGAGGGCTGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR CCA 72 bp | GTCTCTGGTTGCACATGTAGCAGAGGATGGCCTAGTTaGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: VSGCTCSRGWPS*PSIRGEALGLG Trigger: CCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCCTCTGCTACATGTGCAACCAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR CCA 72 bp | GAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATaGCCTAGTTGGCCATCAATAAGAGGAGAGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: ESCVSGCTCSRG*PSWPSIRGEAL Trigger: AAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCAGCCCTCTAAGATAAACAACAATATGAACAACCTAGTAATCCTGAGAGTTGAGAGGCCCTTGGTCTaGGGAAGATTATATGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LQPSKINNNMNNLVILRVERPLV*GRLYAP Trigger: TGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC...AACTCTCAGGATTACTAGGTTGTTCATATTGTTGTTTATCTTAGAGGGCTGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR CCA 90 bp | GGATGGCCTAGTTGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTGATTGCAGCTCAGGGTaGTCAGTGATGCCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: GWPSWPSIRGEALGLGKIDCSSG*SVMPIR Trigger: CCTGATGGGCATCACTGACCACCCTGAGCTGCAATC...AATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR GCA 90 bp | GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGCCAGGCCAAACAATGAGGATTaGAGCTCAGGGTGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ERPLVLGRLYAPVQENARPNNED*SSGWSV Trigger: CACTGACCACCCTGAGCTGCAATCCTCATTGTTTGG...CCTGGCATTCTCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR CCA 90 bp | AGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTAGTGATTGCAGCTCAGGGTaGTCAGTGATGCCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: SNPESCVSGCTCSRGWPSDCSSG*SVMPIR Trigger: CCTGATGGGCATCACTGACCACCCTGAGCTGCAATC...ACTAGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR CCA 90 bp | TGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTGATTGCAGCTCAGGGTaGTCAGTGATGCCCATCAGG | + |
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Preference number: 4 (lower is better) Translates to: WPSIRGEALGLGKIICSSDCSSG*SVMPIR Trigger: CCTGATGGGCATCACTGACCACCCTGAGCTGCAATC...ACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGCCAGGTCAGTGTCAAAGGAATaGCTGGATTTGGGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: ERPLVLGRLYAPVQENARSVSKE*LDLGCM Trigger: CATGCAGCCCAAATCCAGTCATTCCTTTGACACTGA...CCTGGCATTCTCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | CCTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTGGGTCCCACAGTTGTTaGATAACCAAGGTCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: PSNPESCVSGCTCSRGWPGSHSC*ITKVSS Trigger: ACTACTGACCTTGGTTATTCAACAACTGTGGGACCC...AGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR GCA 90 bp | CTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTACCAAACAATGAGGATTaGAGCTCAGGGTGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LVILRVVSLVAHVAEDGLPNNED*SSGWSV Trigger: CACTGACCACCCTGAGCTGCAATCCTCATTGTTTGG...TAGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | AGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTAGTTCAGTGTCAAAGGAATaGCTGGATTTGGGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: SNPESCVSGCTCSRGWPSSVSKE*LDLGCM Trigger: CATGCAGCCCAAATCCAGTCATTCCTTTGACACTGA...ACTAGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | CCTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTCAAATTTCCCACCAGTaGTATCAGATAGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PSNPESCVSGCTCSRGWPQISHQ*YQIDEK Trigger: CTTCTCATCTATCTGATATCACTGGTGGGAAATTTG...AGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | GGATGGCCTAGTTGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTAAAGTTCACAAGCAATaGACAGAAGAAAGAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GWPSWPSIRGEALGLGKIKVHKQ*TEERRL Trigger: TAGCCTTCTTTCTTCTGTTCATTGCTTGTGAACTTT...AATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGCCAGGAAAGTTCACAAGCAATaGACAGAAGAAAGAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: ERPLVLGRLYAPVQENARKVHKQ*TEERRL Trigger: TAGCCTTCTTTCTTCTGTTCATTGCTTGTGAACTTT...CCTGGCATTCTCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGCCAGGTTTTTCCCTGTCCTATaGAGAGCATCTTTTACATCT | + |
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Preference number: 4 (lower is better) Translates to: ERPLVLGRLYAPVQENARFFPVL*RASFTS Trigger: AGATGTAAAAGATGCTCTTCATAGGACAGGGAAAAA...CCTGGCATTCTCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | TGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTCAAATTTCCCACCAGTaGTATCAGATAGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: WPSIRGEALGLGKIICSSQISHQ*YQIDEK Trigger: CTTCTCATCTATCTGATATCACTGGTGGGAAATTTG...ACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | CCTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTTTTTTCCCTGTCCTATaGAGAGCATCTTTTACATCT | + |
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Preference number: 4 (lower is better) Translates to: PSNPESCVSGCTCSRGWPFFPVL*RASFTS Trigger: AGATGTAAAAGATGCTCTTCATAGGACAGGGAAAAA...AGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR GCA 90 bp | ATAGTGATTTACACGCAAAGCAGAGTACTCAGTTTTCTCTCACTGTGGTCAACTCCAAACAATGAGGATTaGAGCTCAGGGTGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IVIYTQSRVLSFLSLWSTPNNED*SSGWSV Trigger: CACTGACCACCCTGAGCTGCAATCCTCATTGTTTGG...AGTTGACCACAGTGAGAGAAAACTGAGTACTCTGCTTTGCGTGTAAATCACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR GCA 90 bp | TGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTGCGGTCATAGGACATTaGAGACAGAATAAAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: WPSIRGEALGLGKIICSSAVIGH*RQNKKF Trigger: GAACTTTTTATTCTGTCTGCAATGTCCTATGACCGC...ACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | TCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGACAAATTTCCCACCAGTaGTATCAGATAGATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SIRGEALGLGKIICSSTGQISHQ*YQIDEK Trigger: CTTCTCATCTATCTGATATCACTGGTGGGAAATTTG...TCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | ATAGTGATTTACACGCAAAGCAGAGTACTCAGTTTTCTCTCACTGTGGTCAACTTCAGTGTCAAAGGAATaGCTGGATTTGGGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: IVIYTQSRVLSFLSLWSTSVSKE*LDLGCM Trigger: CATGCAGCCCAAATCCAGTCATTCCTTTGACACTGA...AGTTGACCACAGTGAGAGAAAACTGAGTACTCTGCTTTGCGTGTAAATCACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR TCA 90 bp | CTGCAGCCCTCTAAGATAAACAACAATATGAACAACCTAGTAATCCTGAGAGTTGGGTCCCACAGTTGTTaGATAACCAAGGTCAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LQPSKINNNMNNLVILRVGSHSC*ITKVSS Trigger: ACTACTGACCTTGGTTATTCAACAACTGTGGGACCC...AACTCTCAGGATTACTAGGTTGTTCATATTGTTGTTTATCTTAGAGGGCTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR GCA 90 bp | ATAGTGATTTACACGCAAAGCAGAGTACTCAGTTTTCTCTCACTGTGGTCAACTGCGGTCATAGGACATTaGAGACAGAATAAAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: IVIYTQSRVLSFLSLWSTAVIGH*RQNKKF Trigger: GAACTTTTTATTCTGTCTGCAATGTCCTATGACCGC...AGTTGACCACAGTGAGAGAAAACTGAGTACTCTGCTTTGCGTGTAAATCACTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR CAA 90 bp | GAGAGGCCCTTGGTCTTGGGAAGATTATATGCTCCAGTACAGGAGAATGCCAGGTTAAAAGAGCCACAATaGTACAGTAGACATAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: ERPLVLGRLYAPVQENARLKEPQ*YSRHKG Trigger: TCCCTTATGTCTACTGTACAATTGTGGCTCTTTTAA...CCTGGCATTCTCCTGTACTGGAGCATATAATCTTCCCAAGACCAAGGGCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR CAA 90 bp | GGATGGCCTAGTTGGCCATCAATAAGAGGAGAGGCCCTTGGTCTTGGGAAGATTTTAAAAGAGCCACAATaGTACAGTAGACATAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: GWPSWPSIRGEALGLGKILKEPQ*YSRHKG Trigger: TCCCTTATGTCTACTGTACAATTGTGGCTCTTTTAA...AATCTTCCCAAGACCAAGGGCCTCTCCTCTTATTGATGGCCAACTAGGCCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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| CDS-3UTR CAA 90 bp | CTAGTAATCCTGAGAGTTGTGTCTCTGGTTGCACATGTAGCAGAGGATGGCCTATTAAAAGAGCCACAATaGTACAGTAGACATAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LVILRVVSLVAHVAEDGLLKEPQ*YSRHKG Trigger: TCCCTTATGTCTACTGTACAATTGTGGCTCTTTTAA...TAGGCCATCCTCTGCTACATGTGCAACCAGAGACACAACTCTCAGGATTACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213789.3 ENSMUST00000216162.3 ENSMUST00000217586.3 |
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