Pregenerated sensors for OLFR1049 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075194Ensembl transcript IDs: ENSMUST00000099899.3, ENSMUST00000216185.3
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 72 bp | GGTGATTGCATAGATAGTGAGGAAGACTGCAAACAGTaGGAGTTTCAGCTCAGCAGTCTGTGTGACTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GDCIDSEEDCKQ*EFQLSSLCDSH Trigger: ATGGGAGTCACACAGACTGCTGAGCTGAAACTCCCACTGTTTGCAGTCTTCCTCACTATCTATGCAATCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099899.3 ENSMUST00000216185.3 |
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| CDS CCA 72 bp | AGGGAACAGCAGAGCCTGGAAGATACTGTAGAGATATaGAATTCCAATAAGCACTTGACAGCGTCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: REQQSLEDTVEI*NSNKHLTASLR Trigger: TCTCAGAGACGCTGTCAAGTGCTTATTGGAATTCCATATCTCTACAGTATCTTCCAGGCTCTGCTGTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099899.3 ENSMUST00000216185.3 |
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| CDS CAA 72 bp | GAAGATACTGTAGAGATATGGAATTCCAATAAGCACTaGACAGCGTCTCTGAGACATTATAGCACTATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EDTVEIWNSNKH*TASLRHYSTIE Trigger: CTCTATAGTGCTATAATGTCTCAGAGACGCTGTCAAGTGCTTATTGGAATTCCATATCTCTACAGTATCTTC 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099899.3 ENSMUST00000216185.3 |
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| CDS CAA 72 bp | AAGTTCACTGACAATGAACAGAATGAAGCATGCCATTaGTGTGGCACAAGCATAATAGGTGATGTTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: KFTDNEQNEACH*CGTSIIGDVVF Trigger: AAAAACAACATCACCTATTATGCTTGTGCCACACAAATGGCATGCTTCATTCTGTTCATTGTCAGTGAACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099899.3 ENSMUST00000216185.3 |
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