Pregenerated sensors for OLFR1048 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075195Ensembl transcript IDs: ENSMUST00000099900.2, ENSMUST00000215607.3
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCTCTGCAAACCTCCTATCCCATCCCTGTTACCTTGCTTCTGTaGGGGTGCACCCCTACCACCCACCCTCTCCAGCCTCACTGTTAT | + |
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Preference number: 1 (lower is better) Translates to: PSLQTSYPIPVTLLL*GCTPTTHPLQPHCY Trigger: ATAACAGTGAGGCTGGAGAGGGTGGGTGGTAGGGGTGCACCCTCACAGAAGCAAGGTAACAGGGATGGGATAGGAGGTTTGCAGAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | TCCTGTCAGCAAACGCTTCTTGGCATCAGCAATAGTGTCTGGGTTTaGTGTCTGCATGTGGGATGGATCCCCAGGTTGGACAGTCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SCQQTLLGISNSVWV*CLHVGWIPRLDSLW Trigger: CCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGCCAAGAAGCGTTTGCTGACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | ATTGGGCTCAGTCCTATGGTTGGCTGTGAGCATCCACATCTGTACTaGTCAGGATCTGGCAGAACCTCTCAGGAGACAGCTGTATCAGAC | + |
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Preference number: 1 (lower is better) Translates to: IGLSPMVGCEHPHLY*SGSGRTSQETAVSD Trigger: GTCTGATACAGCTGTCTCCTGAGAGGTTCTGCCAGATCCTGACCAGTACAGATGTGGATGCTCACAGCCAACCATAGGACTGAGCCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | GTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTTGGACAGTCTCTaGATGGCCTTTATTTCAGACTCTGTTCCACTCTTTGTCCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: VWCLHVGWIPRLDSL*MAFISDSVPLFVPA Trigger: TGCAGGGACAAAGAGTGGAACAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | CTTGGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCATGTGGGATaGATCCCCAGGTTGGACAGTCTCTGGATGGCCTTTATTTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LGISNSVWVWCLHVG*IPRLDSLWMAFISD Trigger: GTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | CGCTTCTTGGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCATGTaGGATGGATCCCCAGGTTGGACAGTCTCTGGATGGCCTTTATTT | + |
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Preference number: 1 (lower is better) Translates to: RFLASAIVSGFGVCM*DGSPGWTVSGWPLF Trigger: AAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGCCAAGAAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | GGTGTCTGCATGTGGGATGGATCCCCAGGTTGGACAGTCTCTGGATaGCCTTTATTTCAGACTCTGTTCCACTCTTTGTCCCTGCATTTT | + |
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Preference number: 1 (lower is better) Translates to: GVCMWDGSPGWTVSG*PLFQTLFHSLSLHF Trigger: AAAATGCAGGGACAAAGAGTGGAACAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 90 bp | ATAGTGTCTGGGTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTTaGACAGTCTCTGGATGGCCTTTATTTCAGACTCTGTTCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: IVSGFGVCMWDGSPG*TVSGWPLFQTLFHS Trigger: AGAGTGGAACAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR GCA 90 bp | ATTTATTTACATTTCAAATGTTATCCCCTTTCCAGGTTCCCTCTCTaGAAACCTCCTATCCCATCCCTGTTACCTTGCTTCTGTGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: IYLHFKCYPLSRFPL*KPPIPSLLPCFCEG Trigger: ACCCTCACAGAAGCAAGGTAACAGGGATGGGATAGGAGGTTTGCAGAGAGGGAACCTGGAAAGGGGATAACATTTGAAATGTAAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CCA 90 bp | CAATGGGGCATGAGGCCTTCACAGAACCAAGGGCCTCCCCTCCCATTGATGCCAGTACTGGTCAGGATCTaGCAGAACCTCTCAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QWGMRPSQNQGPPLPLMPVLVRI*QNLSGD Trigger: GTCTCCTGAGAGGTTCTGCCAGATCCTGACCAGTAC...TGGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGGCCTCATGCCCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCTGGGTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTTGGACAGTCTCAAATTTTGGAGATGGTaGGTGGCCCCATCCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SVWVWCLHVGWIPRLDSLKFWRW*VAPSLS Trigger: ACTGAGGGATGGGGCCACCCACCATCTCCAAAATTT...GAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCAGGAGACAGCTGTATCAGACTCCTGTCAGCAAACGCTTCTTGGCATCAGTTTGGTGTCTGCATGTaGGATGGATCCCCAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: LSGDSCIRLLSANASWHQFGVCM*DGSPGW Trigger: CCAACCTGGGGATCCATCCCACATGCAGACACCAAA...CTGATGCCAAGAAGCGTTTGCTGACAGGAGTCTGATACAGCTGTCTCCTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 90 bp | CCTCTCAGGAGACAGCTGTATCAGACTCCTGTCAGCAAACGCTTCTaGGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCATGTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PLRRQLYQTPVSKRF*ASAIVSGFGVCMWD Trigger: ATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGCCAAGAAGCGTTTGCTGACAGGAGTCTGATACAGCTGTCTCCTGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 90 bp | AATAGTGTCTGGGTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTaGGACAGTCTCTGGATGGCCTTTATTTCAGACTCTGTTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: NSVWVWCLHVGWIPR*DSLWMAFISDSVPL Trigger: GAGTGGAACAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTGGTAGTGTGTATGTGGTGAGATTCAACTTTGTATGTATCAGGGGAAGGTCCTATGGTTGGCTGTaGGCATCCACATCTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: GGGSVYVVRFNFVCIRGRSYGWL*ASTSVL Trigger: CAGTACAGATGTGGATGCTCACAGCCAACCATAGGA...CCTTCCCCTGATACATACAAAGTTGAATCTCACCACATACACACTACCACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCAGACTCCTGTCAGCAAACGCTTCTTGGCATCAGCAATAGTGTCTGGGTGGACAGTCTCTGGATaGCCTTTATTTCAGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: LYQTPVSKRFLASAIVSGWTVSG*PLFQTL Trigger: CAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCA...CCCAGACACTATTGCTGATGCCAAGAAGCGTTTGCTGACAGGAGTCTGATACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CCA 90 bp | AACACTAATAAGAGCACTCAGCTCAGTGGTGGTGGTAGTGTGTATGTGGTGAGAAACATTCTTCTACAATaGGGCATGAGGCCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: NTNKSTQLSGGGSVYVVRNILLQ*GMRPSQ Trigger: CTGTGAAGGCCTCATGCCCCATTGTAGAAGAATGTT...TCTCACCACATACACACTACCACCACCACTGAGCTGAGTGCTCTTATTAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CCA 90 bp | TTATTTACATTTCAAATGTTATCCCCTTTCCAGGTTCCCTCTCTGCAAACCTCCCCTAACCTCTGGATATaGTCTCGACTGGTTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LFTFQMLSPFQVPSLQTSPNLWI*SRLVLP Trigger: AGGGAGAACCAGTCGAGACCATATCCAGAGGTTAGG...GGAGGTTTGCAGAGAGGGAACCTGGAAAGGGGATAACATTTGAAATGTAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR TCA 90 bp | TTTACATTTCAAATGTTATCCCCTTTCCAGGTTCCCTCTCTGCAAACCTCCTATAAAGGCAATTCTATGTaGAAATTTTGGAGATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FTFQMLSPFQVPSLQTSYKGNSM*KFWRWW Trigger: CCACCATCTCCAAAATTTTCACATAGAATTGCCTTT...ATAGGAGGTTTGCAGAGAGGGAACCTGGAAAGGGGATAACATTTGAAATGTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR TCA 72 bp | CAAACCTCCTATCCCATCCCTGTTACCTTGCTTCTGTaGGGGTGCACCCCTACCACCCACCCTCTCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: QTSYPIPVTLLL*GCTPTTHPLQP Trigger: AGGCTGGAGAGGGTGGGTGGTAGGGGTGCACCCTCACAGAAGCAAGGTAACAGGGATGGGATAGGAGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CAA 90 bp | ACAATGGGGCATGAGGCCTTCACAGAACCAAGGGCCTCCCCTCCCATTGATGCCGTCAGCAAACGCTTCTaGGCATCAGCAATAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: TMGHEAFTEPRASPPIDAVSKRF*ASAIVS Trigger: AGACACTATTGCTGATGCCAAGAAGCGTTTGCTGAC...GGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGGCCTCATGCCCCATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | GCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCATGTaGGATGGATCCCCAGGTTGGACAGTCTCTGGATGG | + |
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Preference number: 3 (lower is better) Translates to: ASAIVSGFGVCM*DGSPGWTVSGW Trigger: CCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | GGGTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTTaGACAGTCTCTGGATGGCCTTTATTTCAGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: GFGVCMWDGSPG*TVSGWPLFQTL Trigger: CAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | AGCAATAGTGTCTGGGTTTGGTGTCTGCATGTGGGATaGATCCCCAGGTTGGACAGTCTCTGGATGGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: SNSVWVWCLHVG*IPRLDSLWMAF Trigger: AAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | CAAACGCTTCTTGGCATCAGCAATAGTGTCTGGGTTTaGTGTCTGCATGTGGGATGGATCCCCAGGTTGGAC | + |
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Preference number: 3 (lower is better) Translates to: QTLLGISNSVWV*CLHVGWIPRLD Trigger: GTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGCCAAGAAGCGTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | AGTCCTATGGTTGGCTGTGAGCATCCACATCTGTACTaGTCAGGATCTGGCAGAACCTCTCAGGAGACAGCT | + |
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Preference number: 3 (lower is better) Translates to: SPMVGCEHPHLY*SGSGRTSQETA Trigger: AGCTGTCTCCTGAGAGGTTCTGCCAGATCCTGACCAGTACAGATGTGGATGCTCACAGCCAACCATAGGACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | CCTCTCCAGCCTCACTGTTATAACATTCTTCTACAATaGGGCATGAGGCCTTCACAGAACCAAGGGCCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PLQPHCYNILLQ*GMRPSQNQGPP Trigger: GGGAGGCCCTTGGTTCTGTGAAGGCCTCATGCCCCATTGTAGAAGAATGTTATAACAGTGAGGCTGGAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR GCA 72 bp | TTCTTGGCATCAGCAATAGTGTCTGGGTTTGGTGTCTaGATGTGGGATGGATCCCCAGGTTGGACAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: FLASAIVSGFGV*MWDGSPGWTVS Trigger: AGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACTATTGCTGATGCCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | ATGTGGGATGGATCCCCAGGTTGGACAGTCTCTGGATaGCCTTTATTTCAGACTCTGTTCCACTCTTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: MWDGSPGWTVSG*PLFQTLFHSLS Trigger: GGACAAAGAGTGGAACAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | CTGCATGTGGGATGGATCCCCAGGTTGGACAGTCTCTaGATGGCCTTTATTTCAGACTCTGTTCCACTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LHVGWIPRLDSL*MAFISDSVPLF Trigger: AAAGAGTGGAACAGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CCA 72 bp | GTTCTTTCCTTAACCACTCCATTGGGCTCAGTCCTATaGTTGGCTGTGAGCATCCACATCTGTACTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VLSLTTPLGSVL*LAVSIHICTGQ Trigger: CTGACCAGTACAGATGTGGATGCTCACAGCCAACCATAGGACTGAGCCCAATGGAGTGGTTAAGGAAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR GCA 72 bp | CATTTCAAATGTTATCCCCTTTCCAGGTTCCCTCTCTaGAAACCTCCTATCCCATCCCTGTTACCTTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: HFKCYPLSRFPL*KPPIPSLLPCF Trigger: GAAGCAAGGTAACAGGGATGGGATAGGAGGTTTGCAGAGAGGGAACCTGGAAAGGGGATAACATTTGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGTATGTATCAGGGGAAGGTGGTTGTATTAATTGTAACCTGCTAAAGTTAGGATGGATCCCCAGGTaGGACAGTCTCTGGATGGCC | + |
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Preference number: 3 (lower is better) Translates to: TLYVSGEGGCINCNLLKLGWIPR*DSLWMA Trigger: GGCCATCCAGAGACTGTCCAACCTGGGGATCCATCC...TAACTTTAGCAGGTTACAATTAATACAACCACCTTCCCCTGATACATACAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGGCACACAGCCATAGTACTAGAGCAGTAGCAGAGAGCTCATGTTTTGATAGTCACATACTTCCTTaGATAAAGCCACATCTACTG | + |
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Preference number: 3 (lower is better) Translates to: QQAHSHSTRAVAESSCFDSHILP*IKPHLL Trigger: CAGTAGATGTGGCTTTATCAAAGGAAGTATGTGACT...ATCAAAACATGAGCTCTCTGCTACTGCTCTAGTACTATGGCTGTGTGCCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CAA 90 bp | TTTACATTTCAAATGTTATCCCCTTTCCAGGTTCCCTCTCTGCAAACCTCCTATTTCTATGTGAAAATTTaGGAGATGGTGGGTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FTFQMLSPFQVPSLQTSYFYVKI*EMVGGP Trigger: GGGGCCACCCACCATCTCCAAAATTTTCACATAGAA...ATAGGAGGTTTGCAGAGAGGGAACCTGGAAAGGGGATAACATTTGAAATGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR-3UTR CAA 90 bp | AAAAGAAACACTAATAAGAGCACTCAGCTCAGTGGTGGTGGTAGTGTGTATGTGAACATATGCTCCCACTaGTATACTATTTGTTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: KRNTNKSTQLSGGGSVYVNICSH*YTICSV Trigger: CACTGAACAAATAGTATACAAGTGGGAGCATATGTT...CACATACACACTACCACCACCACTGAGCTGAGTGCTCTTATTAGTGTTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR TCA 72 bp | ATCCCAAATAGGCCCACCAATGAGGACAGGCCTTTGTaGAACAGTCTCATTAAAACTACCACAGATATAAAT | + |
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Preference number: 3 (lower is better) Translates to: IPNRPTNEDRPL*NSLIKTTTDIN Trigger: ATTTATATCTGTGGTAGTTTTAATGAGACTGTTTCACAAAGGCCTGTCCTCATTGGTGGGCCTATTTGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR TCA 72 bp | CATGAGTTTGGGGAACATATCAGATCTCAACAGTGTTaGTGCTATGATTTACAAACAGATACCAATAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: HEFGEHIRSQQC*CYDLQTDTNKG Trigger: TCCTTTATTGGTATCTGTTTGTAAATCATAGCATCAACACTGTTGAGATCTGATATGTTCCCCAAACTCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR GCA 90 bp | CAATGGGGCATGAGGCCTTCACAGAACCAAGGGCCTCCCCTCCCATTGATGCCAGAATGCAATGTAGAATaGCATCTGCACGGCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: QWGMRPSQNQGPPLPLMPECNVE*HLHGTS Trigger: GCTTGTGCCGTGCAGATGGCATTCTACATTGCATTC...TGGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGGCCTCATGCCCCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | ATGAGGCCTTCACAGAACCAAGGGCCTCCCCTCCCATaGATGCCAGATAAGACCCCTTCAGATCCTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: MRPSQNQGPPLP*MPDKTPSDPSV Trigger: AACTGAAGGATCTGAAGGGGTCTTATCTGGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGGCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | TGGGTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTaGGACAGTCTCTGGATGGCCTTTATTTCAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: WVWCLHVGWIPR*DSLWMAFISDS Trigger: AGAGTCTGAAATAAAGGCCATCCAGAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR TCA 90 bp | ATGGGGCATGAGGCCTTCACAGAACCAAGGGCCTCCCCTCCCATTGATGCCAGAAAGCATAGTAAGAGATaGCATTTTGTTCCACCACAA | + |
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Preference number: 4 (lower is better) Translates to: MGHEAFTEPRASPPIDARKHSKR*HFVPPQ Trigger: TTGTGGTGGAACAAAATGTCATCTCTTACTATGCTT...TCTGGCATCAATGGGAGGGGAGGCCCTTGGTTCTGTGAAGGCCTCATGCCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR GCA 90 bp | GGGGCATGCCTAACCTCTGGATATGGTCTCGACTGGTTCTCCCTTCCCTGGAGTGCGATCATAGGCCATTaGAGACAATATAAACAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GACLTSGYGLDWFSLPWSAIIGH*RQYKQF Trigger: GAACTGTTTATATTGTCTGCAATGGCCTATGATCGC...ACTCCAGGGAAGGGAGAACCAGTCGAGACCATATCCAGAGGTTAGGCATGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | AGACAGCTGTATCAGACTCCTGTCAGCAAACGCTTCTaGGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: RQLYQTPVSKRF*ASAIVSGFGVC Trigger: GCAGACACCAAACCCAGACACTATTGCTGATGCCAAGAAGCGTTTGCTGACAGGAGTCTGATACAGCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | CTTTCCTTAACCACTCCATTGGGCTCAGTCCTATGGTaGGCTGTGAGCATCCACATCTGTACTGGTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LSLTTPLGSVLW*AVSIHICTGQD Trigger: ATCCTGACCAGTACAGATGTGGATGCTCACAGCCAACCATAGGACTGAGCCCAATGGAGTGGTTAAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | CCTTCAGATCCTTCAGTTCTTTCCTTAACCACTCCATaGGGCTCAGTCCTATGGTTGGCTGTGAGCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: PSDPSVLSLTTP*GSVLWLAVSIH Trigger: GTGGATGCTCACAGCCAACCATAGGACTGAGCCCAATGGAGTGGTTAAGGAAAGAACTGAAGGATCTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR GCA 90 bp | GAGAGCTCATGTTTTGATCCACAAGAGGCAGAGAGCACAAAATGGGAATCATATCCCAAAAGCAGAAGCTaGAGCTCAGGCCTGTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: ESSCFDPQEAESTKWESYPKSRS*SSGLCV Trigger: TACACACAGGCCTGAGCTGCAGCTTCTGCTTTTGGG...ATATGATTCCCATTTTGTGCTCTCTGCCTCTTGTGGATCAAAACATGAGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR TCA 90 bp | GGTGGTGGTAGTGTGTATGTGGTGAGATTCAACTTTGTATGTATCAGGGGAAGGATGAGACCCACAAGTTaGAAAGGCCTTTTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGGSVYVVRFNFVCIRGRMRPTS*KGLFPS Trigger: GGAAGGAAAAAGGCCTTTTCAACTTGTGGGTCTCAT...CCTTCCCCTGATACATACAAAGTTGAATCTCACCACATACACACTACCACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR GCA 90 bp | GGTGGTGGTAGTGTGTATGTGGTGAGATTCAACTTTGTATGTATCAGGGGAAGGCTTCCATCTGCAGAATaGATTCTATATATGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GGGSVYVVRFNFVCIRGRLPSAE*ILYMAS Trigger: ACTGGCCATATATAGAATGCATTCTGCAGATGGAAG...CCTTCCCCTGATACATACAAAGTTGAATCTCACCACATACACACTACCACCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR TCA 90 bp | AAAAGAAACACTAATAAGAGCACTCAGCTCAGTGGTGGTGGTAGTGTGTATGTGCCAACTTGGTCAAAATaGTCATGCTCATGTTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: KRNTNKSTQLSGGGSVYVPTWSK*SCSCCL Trigger: TAGGCAACATGAGCATGATCATTTTGACCAAGTTGG...CACATACACACTACCACCACCACTGAGCTGAGTGCTCTTATTAGTGTTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | AAAACTACCACAGATATAAATTGGAAACACATGAGTTaGGGGAACATATCAGATCTCAACAGTGTTGATGCT | + |
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Preference number: 4 (lower is better) Translates to: KTTTDINWKHMS*GNISDLNSVDA Trigger: AGCATCAACACTGTTGAGATCTGATATGTTCCCCAAACTCATGTGTTTCCAATTTATATCTGTGGTAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| 3UTR CAA 72 bp | CTCCCTTCCCTGGAGTTCTGTAATTTAAGAACTATTTaGTGTAACTACAAGGGATGCATTCTAATGTTATAT | + |
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Preference number: 4 (lower is better) Translates to: LPSLEFCNLRTI*CNYKGCILMLY Trigger: ATATAACATTAGAATGCATCCCTTGTAGTTACACAAAATAGTTCTTAAATTACAGAACTCCAGGGAAGGGAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR CAA 90 bp | AGTGTCTGGGTTTGGTGTCTGCATGTGGGATGGATCCCCAGGTTGGACAGTCTCAGGCGAGAGTCCAACTaGGTCAAAATGATCATGCTC | + |
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Preference number: 5 (lower is better) Translates to: SVWVWCLHVGWIPRLDSLRRESN*VKMIML Trigger: GAGCATGATCATTTTGACCAAGTTGGACTCTCGCCT...GAGACTGTCCAACCTGGGGATCCATCCCACATGCAGACACCAAACCCAGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR CAA 90 bp | AACACTAATAAGAGCACTCAGCTCAGTGGTGGTGGTAGTGTGTATGTGGTGAGAAACACAGAGGCTATTTaGTCAGTTTCAAAGGAGTGT | + |
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Preference number: 5 (lower is better) Translates to: NTNKSTQLSGGGSVYVVRNTEAI*SVSKEC Trigger: ACACTCCTTTGAAACTGACAAAATAGCCTCTGTGTT...TCTCACCACATACACACTACCACCACCACTGAGCTGAGTGCTCTTATTAGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS-3UTR CAA 90 bp | TTATTTACATTTCAAATGTTATCCCCTTTCCAGGTTCCCTCTCTGCAAACCTCCAGTTATCATCACAGCTaGGAAGACACTGTAGAGATA | + |
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Preference number: 5 (lower is better) Translates to: LFTFQMLSPFQVPSLQTSSYHHS*EDTVEI Trigger: TATCTCTACAGTGTCTTCCAAGCTGTGATGATAACT...GGAGGTTTGCAGAGAGGGAACCTGGAAAGGGGATAACATTTGAAATGTAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215607.3 |
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| CDS GCA 90 bp | TGCAGACAATATAAACAGTTCACTGATGATGAATGCAATGTAGAATaGCATCTGCACGGCACAAGCATAGTAAGAGATGACATTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: CRQYKQFTDDECNVE*HLHGTSIVRDDILF Trigger: GAACAAAATGTCATCTCTTACTATGCTTGTGCCGTGCAGATGGCATTCTACATTGCATTCATCATCAGTGAACTGTTTATATTGTCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099900.2 ENSMUST00000215607.3 |
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| CDS GCA 72 bp | TATAAACAGTTCACTGATGATGAATGCAATGTAGAATaGCATCTGCACGGCACAAGCATAGTAAGAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: YKQFTDDECNVE*HLHGTSIVRDD Trigger: GTCATCTCTTACTATGCTTGTGCCGTGCAGATGGCATTCTACATTGCATTCATCATCAGTGAACTGTTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099900.2 ENSMUST00000215607.3 |
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| CDS GCA 72 bp | CATTGCAGACAATATAAACAGTTCACTGATGATGAATaGAATGTAGAATGCCATCTGCACGGCACAAGCATA | + |
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Preference number: 6 (lower is better) Translates to: HCRQYKQFTDDE*NVECHLHGTSI Trigger: TATGCTTGTGCCGTGCAGATGGCATTCTACATTGCATTCATCATCAGTGAACTGTTTATATTGTCTGCAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099900.2 ENSMUST00000215607.3 |
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| CDS TCA 72 bp | TGTAATTCTTGTCAGAATGAATTCATCTGGCACTGTTaGGTTCCTGTGGCTCATTTCAACCTTCTGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: CNSCQNEFIWHC*VPVAHFNLLKR Trigger: TCTTTTCAGAAGGTTGAAATGAGCCACAGGAACTCAACAGTGCCAGATGAATTCATTCTGACAAGAATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099900.2 |
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