Pregenerated sensors for OLFR1042 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075202Ensembl transcript IDs: ENSMUST00000099908.6, ENSMUST00000215624.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGTTTCCATGGGTCTGGTGTCTCAGTCCTTGTCCTGTCTTGGCTaGTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTC | + |
|
Preference number: 1 (lower is better) Translates to: EVSMGLVSQSLSCLG*WQQHSLRATMTHIF Trigger: GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGACTGAGACACCAGACCCATGGAAACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 90 bp | GTTTCCATGGGTCTGGTGTCTCAGTCCTTGTCCTGTCTTGGCTGCTaGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: VSMGLVSQSLSCLGC*QQHSLRATMTHIFL Trigger: GAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGACTGAGACACCAGACCCATGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 90 bp | TTGTCAAGGCTTAGACTCACAAGGTACAGAGAAGAGAATATGATCTaGGGATCACTGTTAGACCTGATTTTCAGGCCCATTATTATGTCA | + |
|
Preference number: 1 (lower is better) Translates to: LSRLRLTRYREENMI*GSLLDLIFRPIIMS Trigger: TGACATAATAATGGGCCTGAAAATCAGGTCTAACAGTGATCCTCAGATCATATTCTCTTCTCTGTACCTTGTGAGTCTAAGCCTTGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 90 bp | GGGATAGTCAATTCCTTTGTATTTATTCTCTACCTTAACACTCATTaGCTGAAAGTAGAGTTCAATGCTGAGATGGTTTCATGGGATCCT | + |
|
Preference number: 1 (lower is better) Translates to: GIVNSFVFILYLNTH*LKVEFNAEMVSWDP Trigger: AGGATCCCATGAAACCATCTCAGCATTGAACTCTACTTTCAGTCAATGAGTGTTAAGGTAGAGAATAAATACAAAGGAATTGACTATCCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CAA 90 bp | AACCGCCCATGTAGGGAGGTTTCCATGGGTCTGGTGTCTCAGTCCTaGTCCTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: NRPCREVSMGLVSQS*SCLGCWQQHSLRAT Trigger: TGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGACTGAGACACCAGACCCATGGAAACCTCCCTACATGGGCGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CAA 90 bp | ACTGGAGAAGGAGCTATACCTAAAGTTGTTGCCTGTCTTCTGAATTaGTTCCCCAACTGGGCTGCCTTGTATGGCCACAGTAGAAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: TGEGAIPKVVACLLN*FPNWAALYGHSRRC Trigger: GCATCTTCTACTGTGGCCATACAAGGCAGCCCAGTTGGGGAACAAATTCAGAAGACAGGCAACAACTTTAGGTATAGCTCCTTCTCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTCCTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACTCACAATAGTACACTaGTACAGGCAGGCAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LVLSWLLATTFTQGYNDSLTIVH*YRQAVN Trigger: ATTCACTGCCTGCCTGTATCAGTGTACTATTGTGAG...TGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCGAGTCTCAAGCTTGCTaGCCAAGAGTTCCTGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSESQAC*PRVPGE Trigger: TTCCCCAGGAACTCTTGGTCAGCAAGCTTGAGACTC...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCAGGAGAATATGGGGGTaGTACCTCTGTGAGGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSRRIWG*YLCEGV Trigger: CACACCCTCACAGAGGTACCACCCCCATATTCTCCT...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCTCCAATGGTCTGGTCTaGTACTACAGTGGACATCAA | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFSNGLV*YYSGHQ Trigger: TTGATGTCCACTGTAGTACCAGACCAGACCATTGGA...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCGCTGAGATGGTTTCATaGGATCCTGGGTTCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFAEMVS*DPGFKF Trigger: GAATTTGAACCCAGGATCCCATGAAACCATCTCAGC...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTCCTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACCTGGGGAAGATTCTTaGATGAAAAACAAAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LVLSWLLATTFTQGYNDSPGEDS*MKNKGA Trigger: TGCTCCTTTGTTTTTCATCCAAGAATCTTCCCCAGG...TGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCTGACCAAGAGTTCCTaGGGAAGATTCTTGGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFLTKSS*GRFLDE Trigger: TTCATCCAAGAATCTTCCCCAGGAACTCTTGGTCAG...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTTGCATCAGGATGGAGTaGGGGGTGGATACGCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVCIRME*GVDTQR Trigger: CCTCTGCGTATCCACCCCCCACTCCATCCTGATGCA...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATTTGTTGCCTGTCTTCTaGATTTGTTCCCCAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ATTFTQGYNDSHLPPLYNLLPVF*ICSPTG Trigger: CCCAGTTGGGGAACAAATTCAGAAGACAGGCAACAA...ATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCGCTTCAAGTATAGACTaGCATACCTCCCTGAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSASSID*HTSLRS Trigger: GCTTCTCAGGGAGGTATGTCAGTCTATACTTGAAGC...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCGGTTTCATGGGATCCTaGGTTCAAATTCTAGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFGFMGS*VQILVP Trigger: TGGTACTAGAATTTGAACCCAGGATCCCATGAAACC...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCCTGGGGAAGATTCTTaGATGAAAAACAAAGGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFPGEDS*MKNKGA Trigger: TGCTCCTTTGTTTTTCATCCAAGAATCTTCCCCAGG...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTCCAGAGGGACCAAACTGTTTTTCACATAACAGAATGCCTTCTCAACAGGCTCACAATAGTACACTaGTACAGGCAGGCAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: FLQRDQTVFHITECLLNRLTIVH*YRQAVN Trigger: ATTCACTGCCTGCCTGTATCAGTGTACTATTGTGAG...CCTGTTGAGAAGGCATTCTGTTATGTGAAAAACAGTTTGGTCCCTCTGGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | GCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATAGTAGAGTTCAATGCTaGGATGGTTTCATGGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: ATTFTQGYNDSHLPPLYNSRVQC*DGFMGS Trigger: GGATCCCATGAAACCATCTCAGCATTGAACTCTACT...ATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | GCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATAGTTCAATGCTGAGATaGTTTCATGGGATCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: ATTFTQGYNDSHLPPLYNSSMLR*FHGILG Trigger: ACCCAGGATCCCATGAAACCATCTCAGCATTGAACT...ATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTCCAGAGGGACCAAACTGTTTTTCACATAACAGAATGCCTTCTCAACAGGAGTTCAATGCTGAGATaGTTTCATGGGATCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: FLQRDQTVFHITECLLNRSSMLR*FHGILG Trigger: ACCCAGGATCCCATGAAACCATCTCAGCATTGAACT...CCTGTTGAGAAGGCATTCTGTTATGTGAAAAACAGTTTGGTCCCTCTGGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTAGGAGAATATGGGGGTaGTACCTCTGTGAGGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVRRIWG*YLCEGV Trigger: CACACCCTCACAGAGGTACCACCCCCATATTCTCCT...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCATATCACACCACCAGTaGTTCCTAAAAGACTATTGT | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFISHHQ*FLKDYC Trigger: ACAATAGTCTTTTAGGAATCACTGGTGGTGTGATAT...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTCCAGAGGGACCAAACTGTTTTTCACATAACAGAATGCCTTCTCAACAGGGGTTTCATGGGATCCTaGGTTCAAATTCTAGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: FLQRDQTVFHITECLLNRGFMGS*VQILVP Trigger: TGGTACTAGAATTTGAACCCAGGATCCCATGAAACC...CCTGTTGAGAAGGCATTCTGTTATGTGAAAAACAGTTTGGTCCCTCTGGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTGTCCTTGTCCTGTCTTaGCTGCTGGCAACAACATTC | + |
|
Preference number: 2 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVVLVLS*LLATTF Trigger: GAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGAC...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCGGGAAGATTCTTGGATaGAAAACAAAGGAGCATATG | + |
|
Preference number: 2 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSGKILG*KTKEHM Trigger: CATATGCTCCTTTGTTTTTCATCCAAGAATCTTCCC...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCAGCCAAGGAAGTTTTACAATGTAACCTGGTAAAAGTTCACACAGTTGCATCCAATGGTCTGGTCTaGTACTACAGTGGACATCAA | + |
|
Preference number: 2 (lower is better) Translates to: MPAKEVLQCNLVKVHTVASNGLV*YYSGHQ Trigger: TTGATGTCCACTGTAGTACCAGACCAGACCATTGGA...TGCAACTGTGTGAACTTTTACCAGGTTACATTGTAAAACTTCCTTGGCTGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCCTTCTCAACAGGAATaGATATGTCTTTGGTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: CLGCWQQHSLRATMTHIFPSQQE*ICLWYK Trigger: TTTATACCAAAGACATATCCATTCCTGTTGAGAAGG...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCAGTGATAAGAAAAGTTaGAAATCCCTCCTTGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSSDKKS*KSLLGD Trigger: ATCACCAAGGAGGGATTTTCAACTTTTCTTATCACT...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTGTCAAAAAGGCTTATTaGACATCATGCCAGCCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVVKKAY*TSCQPR Trigger: CCTTGGCTGGCATGATGTGCAATAAGCCTTTTTGAC...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGCCTTCTCAACAGGAATGGATATGTCTTTGGTATAAAATGCATGGTCAAAGTAGAGTTCAATGCTaGGATGGTTTCATGGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: RMPSQQEWICLWYKMHGQSRVQC*DGFMGS Trigger: GGATCCCATGAAACCATCTCAGCATTGAACTCTACT...TTGACCATGCATTTTATACCAAAGACATATCCATTCCTGTTGAGAAGGCATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTGAGAGGGTTAGAGATTaGGATGTAAAATGGATAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVERVRD*DVKWIS Trigger: ACTTATCCATTTTACATCCCAATCTCTAACCCTCTC...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | GGTCTGGTGTCTCAGTCCTTGTCCTGTCTTGGCTGCTaGCAACAACATTCACTCAGGGCTACAATGACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLVSQSLSCLGC*QQHSLRATMTH Trigger: GTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGACTGAGACACCAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR GCA 72 bp | ATGGGTCTGGTGTCTCAGTCCTTGTCCTGTCTTGGCTaGTGGCAACAACATTCACTCAGGGCTACAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: MGLVSQSLSCLG*WQQHSLRATMT Trigger: AGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGACTGAGACACCAGACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | TCACTCTCTCAGAGGAGAAGGAGGAGAATATGGGGGTaGTACCTCTGTGAGGGTGTGAGAGGGTTAGAGATT | + |
|
Preference number: 3 (lower is better) Translates to: SLSQRRRRRIWG*YLCEGVRGLEI Trigger: AATCTCTAACCCTCTCACACCCTCACAGAGGTACCACCCCCATATTCTCCTCCTTCTCCTCTGAGAGAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | TTTGATCTTTTAACCGCCCATGTAGGGAGGTTTCCATaGGTCTGGTGTCTCAGTCCTTGTCCTGTCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: FDLLTAHVGRFP*VWCLSPCPVLA Trigger: AGCCAAGACAGGACAAGGACTGAGACACCAGACCCATGGAAACCTCCCTACATGGGCGGTTAAAAGATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CAA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCCCCAACTGGGCTGCCTaGTATGGCCACAGTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSPNWAA*YGHSRR Trigger: TCTTCTACTGTGGCCATACAAGGCAGCCCAGTTGGG...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 72 bp | GAGAAGGAGCTATACCTAAAGTTGTTGCCTGTCTTCTaGATTTGTTCCCCAACTGGGCTGCCTTGTATGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EKELYLKLLPVF*ICSPTGLPCMA Trigger: GGCCATACAAGGCAGCCCAGTTGGGGAACAAATTCAGAAGACAGGCAACAACTTTAGGTATAGCTCCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTCCCAACTGGGCTGCCTaGTATGGCCACAGTAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVPNWAA*YGHSRR Trigger: TCTTCTACTGTGGCCATACAAGGCAGCCCAGTTGGG...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 72 bp | TGCACGTTGTTCAGAGTCCAGCTCACAATAGTACACTaGTACAGGCAGGCAGTGAATTTCAAAAGGATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CTLFRVQLTIVH*YRQAVNFKRMR Trigger: CCTCATCCTTTTGAAATTCACTGCCTGCCTGTATCAGTGTACTATTGTGAGCTGGACTCTGAACAACGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 72 bp | TTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATaGCTCACATCTTCCTCCACTCTACAATGTATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LAAGNNIHSGLQ*LTSSSTLQCIL Trigger: AAGGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCCTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCAATAAAAGAGAGTATATaGAGTCTCAAGCTTGCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LVLSWLLATTFTQGYNDSIKESI*SLKLAD Trigger: GTCAGCAAGCTTGAGACTCAATATACTCTCTTTTAT...TGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | GCAGGCAGTGAATTTCAAAAGGATGAGGTACTCCAATaGTCTGGTCTGGTACTACAGTGGACATCAAATATT | + |
|
Preference number: 3 (lower is better) Translates to: AGSEFQKDEVLQ*SGLVLQWTSNI Trigger: AATATTTGATGTCCACTGTAGTACCAGACCAGACCATTGGAGTACCTCATCCTTTTGAAATTCACTGCCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 72 bp | CTTAGACTCACAAGGTACAGAGAAGAGAATATGATCTaGGGATCACTGTTAGACCTGATTTTCAGGCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LRLTRYREENMI*GSLLDLIFRPI Trigger: AATGGGCCTGAAAATCAGGTCTAACAGTGATCCTCAGATCATATTCTCTTCTCTGTACCTTGTGAGTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR GCA 72 bp | CTCCAGAGGGACCAAACTGTTTTTCACATAACAGAATaGCTTCTCAACAGGAATGGATATGTCTTTGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: LQRDQTVFHITE*LLNRNGYVFGI Trigger: TATACCAAAGACATATCCATTCCTGTTGAGAAGGCATTCTGTTATGTGAAAAACAGTTTGGTCCCTCTGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | AACAGAATGCCTTCTCAACAGGAATGGATATGTCTTTaGTATAAAATGCATGGTCAAGAGCAGTTAGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NRMPSQQEWICL*YKMHGQEQLED Trigger: GTCTTCTAACTGCTCTTGACCATGCATTTTATACCAAAGACATATCCATTCCTGTTGAGAAGGCATTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAATGCCTTCTCAACAGGAATGGATATGTCTTTGGTATAAAATGCATGGTCAAGCAGTTAGAAGACATTaGTTTACTCTCATATGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RMPSQQEWICLWYKMHGQAVRRH*FTLICG Trigger: GCCACATATGAGAGTAAACAAATGTCTTCTAACTGC...TTGACCATGCATTTTATACCAAAGACATATCCATTCCTGTTGAGAAGGCATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | AATTTCAAAAGGATGAGGTACTCCAATGGTCTGGTCTaGTACTACAGTGGACATCAAATATTTGAAAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: NFKRMRYSNGLV*YYSGHQIFESK Trigger: CTTACTTTCAAATATTTGATGTCCACTGTAGTACCAGACCAGACCATTGGAGTACCTCATCCTTTTGAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR TCA 72 bp | ACACCACCAGTGATTCCTAAAAGACTATTGTTACACTaGAATGATCAATGGGAGAAATTTACAGACCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TPPVIPKRLLLH*NDQWEKFTDLH Trigger: ATGAAGGTCTGTAAATTTCTCCCATTGATCATTTCAGTGTAACAATAGTCTTTTAGGAATCACTGGTGGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CCA 72 bp | TGTTTTTCACATAACAGAATGCCTTCTCAACAGGAATaGATATGTCTTTGGTATAAAATGCATGGTCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFSHNRMPSQQE*ICLWYKMHGQE Trigger: CTCTTGACCATGCATTTTATACCAAAGACATATCCATTCCTGTTGAGAAGGCATTCTGTTATGTGAAAAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| 3UTR CAA 72 bp | TTTCCATGGGTCTGGTGTCTCAGTCCTTGTCCTGTCTaGGCTGCTGGCAACAACATTCACTCAGGGCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: FPWVWCLSPCPV*AAGNNIHSGLQ Trigger: TTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAGGACTGAGACACCAGACCCATGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCCCGAAGAGACTGACCTaGAGCTCTGAGTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSPKRLT*SSESSV Trigger: CACAGATGACTCAGAGCTTCAGGTCAGTCTCTTCGG...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTCCTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCAACCTGTCATAGGCCATaGTTGACAGCAAGTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLSWLLATTFTQGYNDSTCHRP*LTASTV Trigger: AACTGTACTTGCTGTCAATCATGGCCTATGACAGGT...TGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAGGACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCGTGATGGAAGTCAGGTaGGATGCACAAGTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLGCWQQHSLRATMTHIFVMEVR*DAQVEK Trigger: CTTTTCCACTTGTGCATCCCACCTGACTTCCATCAC...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCGTTCAGAGAATGACTTaGCTTGGGCTGCAAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: CLGCWQQHSLRATMTHIFVQRMT*LGLQVH Trigger: ATGTACTTGCAGCCCAAGTCAAGTCATTCTCTGAAC...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGCCAAGGAAGTTTTACAATGTAACCTGGTAAAAGTTCACACAGTTGCACCGAAGAGACTGACCTaGAGCTCTGAGTCATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MPAKEVLQCNLVKVHTVAPKRLT*SSESSV Trigger: CACAGATGACTCAGAGCTTCAGGTCAGTCTCTTCGG...TGCAACTGTGTGAACTTTTACCAGGTTACATTGTAAAACTTCCTTGGCTGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCAACTGAGTGGCACATaGGTAGAAGGTTATGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSWLLATTFTQGYNDSHLQLSGT*VEGYAF Trigger: AAAAGCATAACCTTCTACGCATGTGCCACTCAGTTG...AAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTATCCGTGATGGAAGTCAGGTaGGATGCACAAGTGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TFTQGYNDSHLPPLYNVSVMEVR*DAQVEK Trigger: CTTTTCCACTTGTGCATCCCACCTGACTTCCATCAC...GGATACATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | GCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCCTCCACTCTACAATGTCATAGGCCATGATTaGCAGCAAGTACAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ATTFTQGYNDSHLPPLYNVIGHD*QQVQFT Trigger: TGTGAACTGTACTTGCTGTCAATCATGGCCTATGAC...ATTGTAGAGTGGAGGAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCAATGAATCCTCAGGATaGCAAAGAGAATGCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: CLGCWQQHSLRATMTHIFNESSG*QRECRY Trigger: ATATCTGCATTCTCTTTGCCATCCTGAGGATTCATT...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCAGAGGGACCAAACTGTTTTTCACATAACAGAATGCCTTCTCAACAGGATTCACCAGAGTGTTTaGAGTGACAGAAGAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLQRDQTVFHITECLLNRIHQSV*SDRRGK Trigger: TTTACCTCTTCTGTCACTCCAAACACTCTGGTGAAT...CCTGTTGAGAAGGCATTCTGTTATGTGAAAAACAGTTTGGTCCCTCTGGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGGGATCCTGGGTTCAAATTCTAGTACCACTAAAGGCAAGTTTTCTCTTTAGCAGCACAACTGAGTaGCACATGCGTAGAAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FMGSWVQILVPLKASFLFSSTTE*HMRRRL Trigger: TAACCTTCTACGCATGTGCCACTCAGTTGTGCTGCT...AAAGAGAAAACTTGCCTTTAGTGGTACTAGAATTTGAACCCAGGATCCCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTGTCATAGGCCATGATTaGCAGCAAGTACAGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVVIGHD*QQVQFT Trigger: TGTGAACTGTACTTGCTGTCAATCATGGCCTATGAC...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTGTTCAGAGAATGACTTaGCTTGGGCTGCAAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVVQRMT*LGLQVH Trigger: ATGTACTTGCAGCCCAAGTCAAGTCATTCTCTGAAC...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR GCA 90 bp | ATGCCAGCCAAGGAAGTTTTACAATGTAACCTGGTAAAAGTTCACACAGTTGCACAACTGAGTGGCACATaGGTAGAAGGTTATGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MPAKEVLQCNLVKVHTVAQLSGT*VEGYAF Trigger: AAAAGCATAACCTTCTACGCATGTGCCACTCAGTTG...TGCAACTGTGTGAACTTTTACCAGGTTACATTGTAAAACTTCCTTGGCTGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | AGAATGCCTTCTCAACAGGAATGGATATGTCTTTGGTATAAAATGCATGGTCAAAGCAGCACAACTGAGTaGCACATGCGTAGAAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RMPSQQEWICLWYKMHGQSSTTE*HMRRRL Trigger: TAACCTTCTACGCATGTGCCACTCAGTTGTGCTGCT...TTGACCATGCATTTTATACCAAAGACATATCCATTCCTGTTGAGAAGGCATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTATTCACCAGAGTGTTTaGAGTGACAGAAGAGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVIHQSV*SDRRGK Trigger: TTTACCTCTTCTGTCACTCCAAACACTCTGGTGAAT...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTCCAGAGGGACCAAACTGTTTTTCACATAACAGAATGCCTTCTCAACAGGAAGACAAGCGGAAAGTaGCCACTGCCTGTGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLQRDQTVFHITECLLNRKTSGK*PLPVQA Trigger: GGCTTGCACAGGCAGTGGCAACTTTCCGCTTGTCTT...CCTGTTGAGAAGGCATTCTGTTATGTGAAAAACAGTTTGGTCCCTCTGGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTAGAGAGCAAAGAGTGTaGAAGCCAGCAATGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSWLLATTFTQGYNDSHLREQRV*KPAMIS Trigger: GCTAATCATTGCTGGCTTCAACACTCTTTGCTCTCT...AAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTTGGCTGCTGGCAACAACATTCACTCAGGGCTACAATGACTCACATCTTCAGAGAGCAAAGAGTGTaGAAGCCAGCAATGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLGCWQQHSLRATMTHIFREQRV*KPAMIS Trigger: GCTAATCATTGCTGGCTTCAACACTCTTTGCTCTCT...GAAGATGTGAGTCATTGTAGCCCTGAGTGAATGTTGTTGCCAGCAGCCAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCAACCTCAGGTTTTAAACATCCATGCAGAAGAAGTGAAAATTATAGTTAAGACAAGCGGAAAGTaGCCACTGCCTGTGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGQPQVLNIHAEEVKIIVKTSGK*PLPVQA Trigger: GGCTTGCACAGGCAGTGGCAACTTTCCGCTTGTCTT...AACTATAATTTTCACTTCTTCTGCATGGATGTTTAAAACCTGAGGTTGCCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS GCA 72 bp | ATTGGAGCCACAGAAAGACAAGCGGAAAGTTGCCACTaGCTGTGCAAGCCCCACAGTGAATCCATAAATGTA | + |
|
Preference number: 6 (lower is better) Translates to: IGATERQAESCH*LCKPHSESINV Trigger: TACATTTATGGATTCACTGTGGGGCTTGCACAGGCAGTGGCAACTTTCCGCTTGTCTTTCTGTGGCTCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||
| CDS TCA 72 bp | ACAACTGAGTGGCACATGCGTAGAAGGTTATGCTTTTaGCTTCACGTAGAAAATTCACCAGAGTGTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTEWHMRRRLCF*LHVENSPECLE Trigger: CTCCAAACACTCTGGTGAATTTTCTACGTGAAGTCAAAAGCATAACCTTCTACGCATGTGCCACTCAGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099908.6 ENSMUST00000215624.2 |
||