Pregenerated sensors for OLFR1039 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075204Ensembl transcript IDs: ENSMUST00000099910.2, ENSMUST00000214364.2, ENSMUST00000216566.3
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTACTTTTGGGCAACAAGAACATTGTCCCCGGGCTGGCCAGTGGTaGTACACACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: LTFGQQEHCPRAGQW*YTPLIPALGRQRQV Trigger: CACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTACCACCACTGGCCAGCCCGGGGACAATGTTCTTGTTGCCCAAAAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CCA 90 bp | ATTCTTACTTTTGGGCAACAAGAACATTGTCCCCGGGCTGGCCAGTaGTGGTACACACCTTTAATCCCAGCACTTGGGAGGCAGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: ILTFGQQEHCPRAGQ*WYTPLIPALGRQRQ Trigger: CTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTACCACCACTGGCCAGCCCGGGGACAATGTTCTTGTTGCCCAAAAGTAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | GTTACACACTGGAAACAGTGGGTGTTCAAACCATGTCCGGTAGAAATCTATCCACCCCGGGCTGGCCAGTaGTGGTACACACCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: VTHWKQWVFKPCPVEIYPPRAGQ*WYTPLI Trigger: GATTAAAGGTGTGTACCACCACTGGCCAGCCCGGGG...TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTGGCTAATAAAACTGGGCAGGATACCTCCTTTCTCTGATCCCCATGTGCTTCAGCATGAATGCTaGAAACCAAGCACTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: TGWLIKLGRIPPFSDPHVLQHEC*KPSTQY Trigger: ATACTGAGTGCTTGGTTTCCAGCATTCATGCTGAAG...CACATGGGGATCAGAGAAAGGAGGTATCCTGCCCAGTTTTATTAGCCAGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | GTTACACACTGGAAACAGTGGGTGTTCAAACCATGTCCGGTAGAAATCTATCCAAGACTTCAGCATGAATaGTGGAAACCAAGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: VTHWKQWVFKPCPVEIYPRLQHE*WKPSTQ Trigger: CTGAGTGCTTGGTTTCCAGCATTCATGCTGAAGTCT...TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTTTGATTTTGAGGGTCTATAGAGTGATTTaGAGGACACCCAGAGCTATA | + |
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Preference number: 2 (lower is better) Translates to: TFNPSTWEAETGGFLILRVYRVI*RTPRAI Trigger: TATAGCTCTGGGTGTCCTGCAAATCACTCTATAGAC...CCTCAAAATCAAAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTTTGATTTTGAGGCTTCAGCATGAATGCTaGAAACCAAGCACTCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: TFNPSTWEAETGGFLILRLQHEC*KPSTQY Trigger: ATACTGAGTGCTTGGTTTCCAGCATTCATGCTGAAG...CCTCAAAATCAAAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCTGGCTAATAAAACTGGGCAGGATACCTCCTTTCTCTGATCCCCATGTGCTAGATTCTTACTTTTaGGCAACAAGAACATTGTCC | + |
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Preference number: 2 (lower is better) Translates to: TGWLIKLGRIPPFSDPHVLDSYF*ATRTLS Trigger: GGACAATGTTCTTGTTGCCCAAAAGTAAGAATCTAG...CACATGGGGATCAGAGAAAGGAGGTATCCTGCCCAGTTTTATTAGCCAGCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTTTGATTTTGAGGATACACATGAAACCATaGGCAAACACAAGCGTATAC | + |
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Preference number: 2 (lower is better) Translates to: TFNPSTWEAETGGFLILRIHMKP*ANTSVY Trigger: GTATACGCTTGTGTTTGCTCATGGTTTCATGTGTAT...CCTCAAAATCAAAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATAGACTTCAGCATGAATaGTGGAAACCAAGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: CPSPASPHVLLALCYFRYRLQHE*WKPSTQ Trigger: CTGAGTGCTTGGTTTCCAGCATTCATGCTGAAGTCT...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | GTTACACACTGGAAACAGTGGGTGTTCAAACCATGTCCGGTAGAAATCTATCCAGTCTATAGAGTGATTTaGAGGACACCCAGAGCTATA | + |
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Preference number: 2 (lower is better) Translates to: VTHWKQWVFKPCPVEIYPVYRVI*RTPRAI Trigger: TATAGCTCTGGGTGTCCTGCAAATCACTCTATAGAC...TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR TCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAGATACCTCCTTTCTCTaGTCCCCATGTGCTAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: LLLLCHFILSGCVVQNKQDTSFL*SPCARV Trigger: TACCCTAGCACATGGGGATCAGAGAAAGGAGGTATC...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | GTTACACACTGGAAACAGTGGGTGTTCAAACCATGTCCGGTAGAAATCTATCCAATGTATGTACATTTGTaGATGTACAGGAAGACCGTG | + |
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Preference number: 2 (lower is better) Translates to: VTHWKQWVFKPCPVEIYPMYVHL*MYRKTV Trigger: CACGGTCTTCCTGTACATCCACAAATGTACATACAT...TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTGATATGTCCATCTCCTaGCTCACCACATGTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: AVSHISCVSRLKIMIHQFDMSIS*LTTCSI Trigger: AATAGAACATGTGGTGAGGCAGGAGATGGACATATC...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTTGTACAGGAAGACCGTaGATAATATCCATTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AVSHISCVSRLKIMIHQFCTGRP*IISIPF Trigger: GAAGGGAATGGATATTATCCACGGTCTTCCTGTACA...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATATGTATGTACATTTGTaGATGTACAGGAAGACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: CPSPASPHVLLALCYFRYMYVHL*MYRKTV Trigger: CACGGTCTTCCTGTACATCCACAAATGTACATACAT...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAACACACTGGAAACAGTaGGTGTTCAAACCATGTCCG | + |
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Preference number: 2 (lower is better) Translates to: LLLLCHFILSGCVVQNKQTHWKQ*VFKPCP Trigger: CGGACATGGTTTGAACACCCACTGTTTCCAGTGTGT...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTCCTAAACAGTTTAGTTaGGTGGTTTCCAGACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: AVSHISCVSRLKIMIHQFPKQFS*VVSRQN Trigger: GTTCTGTCTGGAAACCACCCAACTAAACTGTTTAGG...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CAA 90 bp | ATCCAGACTCAAGATAATGATCCATCAGTTTTCATTTTGAGCAAATaGGTCAGATATGTCCATCTCCTGCCTCACCACATGTTCTATTGG | + |
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Preference number: 2 (lower is better) Translates to: IQTQDNDPSVFILSK*VRYVHLLPHHMFYW Trigger: CCAATAGAACATGTGGTGAGGCAGGAGATGGACATATCTGACCAATTTGCTCAAAATGAAAACTGATGGATCATTATCTTGAGTCTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTATACACATGAAACCATaGGCAAACACAAGCGTATAC | + |
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Preference number: 2 (lower is better) Translates to: AVSHISCVSRLKIMIHQFIHMKP*ANTSVY Trigger: GTATACGCTTGTGTTTGCTCATGGTTTCATGTGTAT...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAGATATGTCCATCTCCTaGCTCACCACATGTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: LLLLCHFILSGCVVQNKQDMSIS*LTTCSI Trigger: AATAGAACATGTGGTGAGGCAGGAGATGGACATATC...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATCTGTATAGAACTAGATaGAAATACACTATAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CPSPASPHVLLALCYFRYLYRTR*KYTIAA Trigger: AGCAGCTATAGTGTATTTCCATCTAGTTCTATACAG...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR GCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAGTTCTATTGGCCTTGTaGTATTTTAGATATCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LLLLCHFILSGCVVQNKQVLLAL*YFRYLL Trigger: TAGGAGATATCTAAAATAGCACAAGGCCAATAGAAC...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAACTGTATAGAACTAGATaGAAATACACTATAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLCHFILSGCVVQNKQLYRTR*KYTIAA Trigger: AGCAGCTATAGTGTATTTCCATCTAGTTCTATACAG...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CCA 72 bp | GGGCAACAAGAACATTGTCCCCGGGCTGGCCAGTGGTaGTACACACCTTTAATCCCAGCACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GQQEHCPRAGQW*YTPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTAAAGGTGTGTACCACCACTGGCCAGCCCGGGGACAATGTTCTTGTTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CCA 72 bp | TTTGGGCAACAAGAACATTGTCCCCGGGCTGGCCAGTaGTGGTACACACCTTTAATCCCAGCACTTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: FGQQEHCPRAGQ*WYTPLIPALGR Trigger: CCTCCCAAGTGCTGGGATTAAAGGTGTGTACCACCACTGGCCAGCCCGGGGACAATGTTCTTGTTGCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATGAGACAGGTGGATTTTaGATTTTGAGGTCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CPSPASPHVLLALCYFRYETGGF*ILRSAW Trigger: CCAGGCTGACCTCAAAATCAAAAATCCACCTGTCTC...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTGAGACAGGTGGATTTTaGATTTTGAGGTCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AVSHISCVSRLKIMIHQFETGGF*ILRSAW Trigger: CCAGGCTGACCTCAAAATCAAAAATCCACCTGTCTC...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR GCA 72 bp | TTTGATTTTGAGGTCAGCCTGGTCTATAGAGTGATTTaGAGGACACCCAGAGCTATACAGAGAAAACTTGTC | + |
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Preference number: 3 (lower is better) Translates to: FDFEVSLVYRVI*RTPRAIQRKLV Trigger: GACAAGTTTTCTCTGTATAGCTCTGGGTGTCCTGCAAATCACTCTATAGACCAGGCTGACCTCAAAATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR GCA 72 bp | CCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTaGTATTTTAGATATCTCCTAAACAGTTTAGTTGGG | + |
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Preference number: 3 (lower is better) Translates to: PSPASPHVLLAL*YFRYLLNSLVG Trigger: CCCAACTAAACTGTTTAGGAGATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATGCTAGATTCTTACTTTaGGGCAACAAGAACATTGTC | + |
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Preference number: 3 (lower is better) Translates to: CPSPASPHVLLALCYFRYARFLL*GNKNIV Trigger: GACAATGTTCTTGTTGCCCAAAAGTAAGAATCTAGC...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR-3UTR CAA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTTCACCACATGTTCTATaGGCCTTGTGCTATTTTAGA | + |
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Preference number: 3 (lower is better) Translates to: AVSHISCVSRLKIMIHQFSPHVL*ALCYFR Trigger: TCTAAAATAGCACAAGGCCAATAGAACATGTGGTGA...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR TCA 72 bp | TCCAGACTCAAGATAATGATCCATCAGTTTTCATTTTaGGCAAATTGGTCAGATATGTCCATCTCCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SRLKIMIHQFSF*ANWSDMSISCL Trigger: GAGGCAGGAGATGGACATATCTGACCAATTTGCTCAAAATGAAAACTGATGGATCATTATCTTGAGTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CCA 72 bp | TTCTTACTACTTATCTCTGTTACACACTGGAAACAGTaGGTGTTCAAACCATGTCCGGTAGAAATCTATCCA | + |
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Preference number: 3 (lower is better) Translates to: FLLLISVTHWKQ*VFKPCPVEIYP Trigger: TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAACAGAGATAAGTAGTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR GCA 72 bp | GGTACCATTGCAAAATATCATAGACTTCAGCATGAATaGTGGAAACCAAGCACTCAGTATTTTCACGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: GTIAKYHRLQHE*WKPSTQYFHVK Trigger: TTTCACGTGAAAATACTGAGTGCTTGGTTTCCAGCATTCATGCTGAAGTCTATGATATTTTGCAATGGTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR TCA 72 bp | TTACACAAACACCAGAGACCAGGCAAAAGCAATCCTTaGAATGATAACATGGTAATTAAACAAACAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LHKHQRPGKSNP*NDNMVIKQTAG Trigger: TCCAGCTGTTTGTTTAATTACCATGTTATCATTTCAAGGATTGCTTTTGCCTGGTCTCTGGTGTTTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CCA 72 bp | GAATGTATGTACATTTGTGGATGTACAGGAAGACCGTaGATAATATCCATTCCCTTCACCTTATACTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: ECMYICGCTGRP*IISIPFTLYFE Trigger: TTCAAAGTATAAGGTGAAGGGAATGGATATTATCCACGGTCTTCCTGTACATCCACAAATGTACATACATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR CCA 90 bp | ACTGGCTGGCTAATAAAACTGGGCAGGATACCTCCTTTCTCTGATCCCCATGTGGGTGACCTCAAGCTCTaGGTCATCTGTCAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TGWLIKLGRIPPFSDPHVGDLKL*VICQAF Trigger: GAAGGCCTGACAGATGACCCAGAGCTTGAGGTCACC...CACATGGGGATCAGAGAAAGGAGGTATCCTGCCCAGTTTTATTAGCCAGCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | ACTGGCTGGCTAATAAAACTGGGCAGGATACCTCCTTTCTCTGATCCCCATGTGACACAGCAAAGAGGGTaGCCTCAAGCTCTGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TGWLIKLGRIPPFSDPHVTQQRG*PQALGH Trigger: ATGACCCAGAGCTTGAGGTCACCCTCTTTGCTGTGT...CACATGGGGATCAGAGAAAGGAGGTATCCTGCCCAGTTTTATTAGCCAGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR CCA 90 bp | ACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTTTGATTTTGAGGGGTGACCTCAAGCTCTaGGTCATCTGTCAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TFNPSTWEAETGGFLILRGDLKL*VICQAF Trigger: GAAGGCCTGACAGATGACCCAGAGCTTGAGGTCACC...CCTCAAAATCAAAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CAA 72 bp | TGTGAGCTAGATTCTTACTTTTGGGCAACAAGAACATaGTCCCCGGGCTGGCCAGTGGTGGTACACACCTTT | + |
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Preference number: 4 (lower is better) Translates to: CELDSYFWATRT*SPGWPVVVHTF Trigger: AAAGGTGTGTACCACCACTGGCCAGCCCGGGGACAATGTTCTTGTTGCCCAAAAGTAAGAATCTAGCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | ACTGGCTGGCTAATAAAACTGGGCAGGATACCTCCTTTCTCTGATCCCCATGTGGTGCAAGCCCCACAGTaGATCCATAAATGTATGTGC | + |
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Preference number: 4 (lower is better) Translates to: TGWLIKLGRIPPFSDPHVVQAPQ*IHKCMC Trigger: GCACATACATTTATGGATTCACTGTGGGGCTTGCAC...CACATGGGGATCAGAGAAAGGAGGTATCCTGCCCAGTTTTATTAGCCAGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | ACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTTTGATTTTGAGGGTGCTGGTGATGACCTaGAGACAGAGCTTTTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: TFNPSTWEAETGGFLILRVLVMT*RQSFLG Trigger: GCCTAAAAAGCTCTGTCTTCAGGTCATCACCAGCAC...CCTCAAAATCAAAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATACACAGCAAAGAGGGTaGCCTCAAGCTCTGGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: CPSPASPHVLLALCYFRYTQQRG*PQALGH Trigger: ATGACCCAGAGCTTGAGGTCACCCTCTTTGCTGTGT...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | ACTGGCTGGCTAATAAAACTGGGCAGGATACCTCCTTTCTCTGATCCCCATGTGTCAGGCCTTCAAGAATaGACTGAAATACTGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: TGWLIKLGRIPPFSDPHVSGLQE*TEILLN Trigger: GTTCAACAGTATTTCAGTTCATTCTTGAAGGCCTGA...CACATGGGGATCAGAGAAAGGAGGTATCCTGCCCAGTTTTATTAGCCAGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | GCAGTCAGCCATATTTCCTGTGTATCCAGACTCAAGATAATGATCCATCAGTTTGTGCTGGTGATGACCTaGAGACAGAGCTTTTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: AVSHISCVSRLKIMIHQFVLVMT*RQSFLG Trigger: GCCTAAAAAGCTCTGTCTTCAGGTCATCACCAGCAC...AAACTGATGGATCATTATCTTGAGTCTGGATACACAGGAAATATGGCTGACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR GCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAAGTTGCCACTGCCTGTaGAAGCCCCACAGTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: LLLLCHFILSGCVVQNKQSCHCL*KPHSES Trigger: GGATTCACTGTGGGGCTTGCACAGGCAGTGGCAACT...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | ACCTTTAATCCCAGCACTTGGGAGGCAGAGACAGGTGGATTTTTGATTTTGAGGTGTGTTTGGAGTGACTaGGGATGTATAACAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: TFNPSTWEAETGGFLILRCVWSD*GCITEI Trigger: GATTTCTGTTATACATCCTCAGTCACTCCAAACACA...CCTCAAAATCAAAAATCCACCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | GTTACACACTGGAAACAGTGGGTGTTCAAACCATGTCCGGTAGAAATCTATCCATCAGGCCTTCAAGAATaGACTGAAATACTGTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: VTHWKQWVFKPCPVEIYPSGLQE*TEILLN Trigger: GTTCAACAGTATTTCAGTTCATTCTTGAAGGCCTGA...TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR CCA 90 bp | GTTACACACTGGAAACAGTGGGTGTTCAAACCATGTCCGGTAGAAATCTATCCAAATGAATCCTCAGGATaGCAAAGAGAATGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: VTHWKQWVFKPCPVEIYPNESSG*QRECRC Trigger: ACATCTGCATTCTCTTTGCCATCCTGAGGATTCATT...TGGATAGATTTCTACCGGACATGGTTTGAACACCCACTGTTTCCAGTGTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR CCA 90 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTTGTGCTATTTTAGATATAATGAATCCTCAGGATaGCAAAGAGAATGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: CPSPASPHVLLALCYFRYNESSG*QRECRC Trigger: ACATCTGCATTCTCTTTGCCATCCTGAGGATTCATT...ATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CAA 72 bp | ACATATGCATACACACGTATGCATGAACCGGTACCATaGCAAAATATCATAGACTTCAGCATGAATGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TYAYTRMHEPVP*QNIIDFSMNAG Trigger: TCCAGCATTCATGCTGAAGTCTATGATATTTTGCAATGGTACCGGTTCATGCATACGTGTGTATGCATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| 3UTR CAA 72 bp | TGTCCATCTCCTGCCTCACCACATGTTCTATTGGCCTaGTGCTATTTTAGATATCTCCTAAACAGTTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: CPSPASPHVLLA*CYFRYLLNSLV Trigger: AACTAAACTGTTTAGGAGATATCTAAAATAGCACAAGGCCAATAGAACATGTGGTGAGGCAGGAGATGGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR TCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAGAACTGAAATACTGTTaGACTGTTACCTTCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLLLCHFILSGCVVQNKQELKYC*TVTFSH Trigger: ATGGCTGAAGGTAACAGTTCAACAGTATTTCAGTTC...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS-3UTR CCA 90 bp | TTGCTCTTGCTTTGCCATTTTATCCTTTCAGGTTGTGTAGTTCAAAACAAGCAAGACTTTCTGGAATCATaGATGGTCAAAGACAATTTT | + |
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Preference number: 4 (lower is better) Translates to: LLLLCHFILSGCVVQNKQDFLES*MVKDNF Trigger: AAAATTGTCTTTGACCATCCATGATTCCAGAAAGTC...TTGCTTGTTTTGAACTACACAACCTGAAAGGATAAAATGGCAAAGCAAGAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214364.2 ENSMUST00000216566.3 |
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| CDS TCA 72 bp | TTCTCGAAGAAAGTTTATAATTGTGTTTGGAGTGACTaGGGATGTATAACAGAAATCAACGAATGCCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: FSKKVYNCVWSD*GCITEINECQV Trigger: CACTTGGCATTCGTTGATTTCTGTTATACATCCTCAGTCACTCCAAACACAATTATAAACTTTCTTCGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099910.2 ENSMUST00000214364.2 ENSMUST00000216566.3 |
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