Pregenerated sensors for OLFR1030 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044923Ensembl transcript IDs: ENSMUST00000056849.3
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAAATATCTGGCCTACAGTGTAGAAAAAGCCCTGTATTTCTGGTaGAATATGTCCCTGTATATACTCCTCAGAACATTCTGGATGACA | + |
|
Preference number: 1 (lower is better) Translates to: TKYLAYSVEKALYFW*NMSLYILLRTFWMT Trigger: TGTCATCCAGAATGTTCTGAGGAGTATATACAGGGACATATTTCACCAGAAATACAGGGCTTTTTCTACACTGTAGGCCAGATATTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGACATGGGGTAAGTACTTCACACCCACATGATGGCTCCAGTGTGCTGCTTGAGGAAGTAAGGAAATaGAAGGCATCAACACTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RGHGVSTSHPHDGSSVLLEEVRK*KASTLK Trigger: CTTCAGTGTTGATGCCTTCCATTTCCTTACTTCCTC...AAGCAGCACACTGGAGCCATCATGTGGGTGTGAAGTACTTACCCCATGTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTGAGAGACCAACGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTAATCCCGCTGAGGTTTaGTGCCTCAGGGTGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KVRDQRGDSLAIDLVLVTNPAEV*CLRVGR Trigger: TCTCCCCACCCTGAGGCATCAAACCTCAGCGGGATT...AGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAACTGTCAGGATTTTCATGCCTTTATGGATTGCCCTGTCCATTTGCATCTTTATGATGGCTCCAGTGTaGTGCTTTGGCAGAGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ATVRIFMPLWIALSICIFMMAPV*CFGREV Trigger: CACTTCTCTGCCAAAGCAGCACACTGGAGCCATCAT...AAAGATGCAAATGGACAGGGCAATCCATAAAGGCATGAAAATCCTGACAGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAACTGTCAGGATTTTCATGCCTTTATGGATTGCCCTGTCCATTTGCATCTTTGTTACAAATCGAAGATaGAGCTGGAGGGCAGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: ATVRIFMPLWIALSICIFVTNRR*SWRAEL Trigger: TAATTCTGCCCTCCAGCTTCATCTTCGATTTGTAAC...AAAGATGCAAATGGACAGGGCAATCCATAAAGGCATGAAAATCCTGACAGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTGAGAGACCAACGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTGGACAAGATGAATCCTaGTTCTCAGCCACGTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KVRDQRGDSLAIDLVLVTGQDES*FSATFS Trigger: GGAGAACGTGGCTGAGAACCAGGATTCATCTTGTCC...AGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTGAGAGACCAACGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCAAGCTCCTGGGATTTaGTGCTGCCACATGCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: KVRDQRGDSLAIDLVLVTQAPGI*CCHMQI Trigger: TATTTGCATGTGGCAGCAGCAAATCCCAGGAGCTTG...AGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTCTGAGAATTCACACTGTGACAAAACACATTGATTTTCTCCATGGTTCTGTCTTACAGAGGACATaGGGTAAGTACTTCACACCC | + |
|
Preference number: 2 (lower is better) Translates to: FGLRIHTVTKHIDFLHGSVLQRT*GKYFTP Trigger: GGGTGTGAAGTACTTACCCCATGTCCTCTGTAAGAC...AGAACCATGGAGAAAATCAATGTGTTTTGTCACAGTGTGAATTCTCAGACCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCCATAAAGACTTAGTAAACACTGGTGATAGTTGTTTACCCACAGCACAGCAAATCCATATTGCTTTGTaGAAAGGCTTCTCGAGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: THKDLVNTGDSCLPTAQQIHIAL*KGFSSV Trigger: GACACTCGAGAAGCCTTTCCACAAAGCAATATGGAT...TTGCTGTGCTGTGGGTAAACAACTATCACCAGTGTTTACTAAGTCTTTATGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAACTGTCAGGATTTTCATGCCTTTATGGATTGCCCTGTCCATTTGCATCTTTAGTGAGAGACCAACGTaGAGATTCTTTAGCTATAGA | + |
|
Preference number: 2 (lower is better) Translates to: ATVRIFMPLWIALSICIFSERPT*RFFSYR Trigger: TCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACT...AAAGATGCAAATGGACAGGGCAATCCATAAAGGCATGAAAATCCTGACAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACGCTCCTGGGATTTGCTaGTGCCACATGCAAATAAAC | + |
|
Preference number: 2 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYAPGIC*CHMQIN Trigger: GTTTATTTGCATGTGGCAGCAGCAAATCCCAGGAGC...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCCATAAAGACTTAGTAAACACTGGTGATAGTTGTTTACCCACAGCACAGCAATTAATACATAGCATCTaGAAAGGTTGCTCAGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: THKDLVNTGDSCLPTAQQLIHSI*KGCSAV Trigger: AACTGCTGAGCAACCTTTTCAGATGCTATGTATTAA...TTGCTGTGCTGTGGGTAAACAACTATCACCAGTGTTTACTAAGTCTTTATGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCTTCTTTTTGTTGCCCTTACACTTTCCAGCTaGTACAGTTCATCAAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RGDSLAIDLVLVTLLFVALTLSS*YSSSRH Trigger: ATGCCTTGATGAACTGTATCAGCTGGAAAGTGTAAG...GGCAACAAAAAGAAGAGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | CGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCTTCTTTTTGTTGCCAGTCCTGTGATATACTaGAATCGCAGTACAACTACC | + |
|
Preference number: 2 (lower is better) Translates to: RGDSLAIDLVLVTLLFVASPVIY*NRSTTT Trigger: GGTAGTTGTACTGCGATTGCAGTATATCACAGGACT...GGCAACAAAAAGAAGAGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGTCTGAGAATTCACACTGTGACAAAACACATTGATTTTCTCCATGGTTCTTGGCAGAGAAGTGTTTaGCTGAAAGTGATTCTTACA | + |
|
Preference number: 2 (lower is better) Translates to: FGLRIHTVTKHIDFLHGSWQRSV*LKVILT Trigger: TGTAAGAATCACTTTCAGTCAAACACTTCTCTGCCA...AGAACCATGGAGAAAATCAATGTGTTTTGTCACAGTGTGAATTCTCAGACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTGAGAGACCAACGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCAAAGTAGAGCTATTTaGGTTATATCCCTTGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: KVRDQRGDSLAIDLVLVTQSRAI*VISLAI Trigger: TATGGCAAGGGATATAACTCAAATAGCTCTACTTTG...AGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAACAGCAAAAACCCCAACTAGGCTACGACATGATTCAATTTGCAATGCATTTTCACACATTTACACATaGATTTTACTTCCTCACAGT | + |
|
Preference number: 2 (lower is better) Translates to: TTAKTPTRLRHDSICNAFSHIYT*ILLPHS Trigger: ACTGTGAGGAAGTAAAATGCATGTGTAAATGTGTGA...AAATGCATTGCAAATTGAATCATGTCGTAGCCTAGTTGGGGTTTTTGCTGTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACGCAAGAAATCAGCTTTaGCCTTCAAAATGTGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYARNQL*PSKCVL Trigger: CAGAACACATTTTGAAGGGCAAAGCTGATTTCTTGC...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACATCCAAACCAACAAATaGAGTTCCAAATTGATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYIQTNK*SSKLMA Trigger: GGCCATCAATTTGGAACTGCATTTGTTGGTTTGGAT...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACTGCAATCCCAGCCCATaGAATGATACTATCTACATT | + |
|
Preference number: 2 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYCNPSP*NDTIYI Trigger: AATGTAGATAGTATCATTCCATGGGCTGGGATTGCA...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCTTCTTTTTGTTGCCATTACCTTGTGTCCATaGACAGAAAATAGGACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RGDSLAIDLVLVTLLFVAITLCP*TENRTR Trigger: TCTTGTCCTATTTTCTGTCCATGGACACAAGGTAAT...GGCAACAAAAAGAAGAGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTGGTCTGAGAATTCACACTGTGACAAAACACATTGATTTTCTCCATGGTTCTGCATGTATGTATATGTaGAAACGTTTTCACATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: FGLRIHTVTKHIDFLHGSACMYM*KRFHIS Trigger: ACTGATGTGAAAACGTTTGCACATATACATACATGC...AGAACCATGGAGAAAATCAATGTGTTTTGTCACAGTGTGAATTCTCAGACCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR TCA 72 bp | AAAGCACAAGTGTATACATCTAATCCCGCTGAGGTTTaGTGCCTCAGGGTGGGGAGACACCCAGGGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KAQVYTSNPAEV*CLRVGRHPGQG Trigger: GCCCTGCCCTGGGTGTCTCCCCACCCTGAGGCATCAAACCTCAGCGGGATTAGATGTATACACTTGTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR TCA 72 bp | TTACAGAGGACATGGGGTAAGTACTTCACACCCACATaGTGGCTCCAGTGTGCTGCTTTGGCAGAGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LQRTWGKYFTPT*WLQCAALAEKC Trigger: ACACTTCTCTGCCAAAGCAGCACACTGGAGCCATCATGTGGGTGTGAAGTACTTACCCCATGTCCTCTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR TCA 72 bp | CTGAAGGTGGTGAGTGAGATTAATAAGCACACCTACTaGGAGTCCTGTGATATACTGCAATCGCAGTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LKVVSEINKHTY*ESCDILQSQYN Trigger: GTTGTACTGCGATTGCAGTATATCACAGGACTCTCAGTAGGTGTGCTTATTAATCTCACTCACCACCTTCAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR GCA 72 bp | TCCTGGTTCTCAGCCACGTTCTCCTTTCTTTTAGTCTaGAATCCCAGCCCATGGAATGATACTATCTACATT | + |
|
Preference number: 3 (lower is better) Translates to: SWFSATFSFLLV*NPSPWNDTIYI Trigger: AATGTAGATAGTATCATTCCATGGGCTGGGATTGCAGACTAAAAGAAAGGAGAACGTGGCTGAGAACCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR CCA 72 bp | TGTGTCCATGGACAGAAAATAGGACAAGATGAATCCTaGTTCTCAGCCACGTTCTCCTTTCTTTTAGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CVHGQKIGQDES*FSATFSFLLVC Trigger: GCAGACTAAAAGAAAGGAGAACGTGGCTGAGAACCAGGATTCATCTTGTCCTATTTTCTGTCCATGGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAACAGCAAAAACCCCAACTAGGCTACGACATGATTCAATTTGCAATGCATTTCTCCAGTGTGCTGCTTaGGCAGAGAAGTGTTTGACT | + |
|
Preference number: 3 (lower is better) Translates to: TTAKTPTRLRHDSICNAFLQCAA*AEKCLT Trigger: AGTCAAACACTTCTCTGCCAAAGCAGCACACTGGAG...AAATGCATTGCAAATTGAATCATGTCGTAGCCTAGTTGGGGTTTTTGCTGTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGAAACTGTGATTTCACAACAGCTGTGCTACCTACACAAGATCTACTCATGGCTGTTGGCAGTGGATaGTTTTTAGGGGATAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CRNCDFTTAVLPTQDLLMAVGSG*FLGDRA Trigger: TGCTCTATCCCCTAAAAACAATCCACTGCCAACAGC...CATGAGTAGATCTTGTGTAGGTAGCACAGCTGTTGTGAAATCACAGTTTCTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR TCA 72 bp | CTGGCCTACAGTGTAGAAAAAGCCCTGTATTTCTGGTaGAATATGTCCCTGTATATACTCCTCAGAACATTC | + |
|
Preference number: 3 (lower is better) Translates to: LAYSVEKALYFW*NMSLYILLRTF Trigger: GAATGTTCTGAGGAGTATATACAGGGACATATTTCACCAGAAATACAGGGCTTTTTCTACACTGTAGGCCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR TCA 72 bp | ATTACCTTGTGTCCATGGACAGAAAATAGGACAAGATaGATCCTGGTTCTCAGCCACGTTCTCCTTTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ITLCPWTENRTR*ILVLSHVLLSF Trigger: AAAAGAAAGGAGAACGTGGCTGAGAACCAGGATTCATCTTGTCCTATTTTCTGTCCATGGACACAAGGTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAACTGTCAGGATTTTCATGCCTTTATGGATTGCCCTGTCCATTTGCATCTTTCTAGTTTTCACTCTCTaGATACTAGGTGCAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ATVRIFMPLWIALSICIFLVFTL*ILGAIH Trigger: ATGAATTGCACCTAGTATCAAGAGAGTGAAAACTAG...AAAGATGCAAATGGACAGGGCAATCCATAAAGGCATGAAAATCCTGACAGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACCATGGTACCAGGAGTTaGAAGCAGCTGATTACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYHGTRS*KQLITL Trigger: CAAGGTAATCAGCTGCTTCAAACTCCTGGTACCATG...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTGAGAGACCAACGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTAAGCAGCTGATTACCTaGTGTCCATGGACAGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KVRDQRGDSLAIDLVLVTKQLIT*CPWTEN Trigger: ATTTTCTGTCCATGGACACAAGGTAATCAGCTGCTT...AGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR CCA 72 bp | ACTGGAATAATAATTTATTCTGGCTTATGGTTCCAGTaGTTACTGTTCATTGTGGCTTACACTTTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TGIIIYSGLWFQ*LLFIVAYTFQL Trigger: CAGCTGGAAAGTGTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTATTCCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACTGCAAGAAATCAGCTTaGCCCTTCAAAATGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYCKKSA*PFKMCS Trigger: AGAACACATTTTGAAGGGCAAAGCTGATTTCTTGCA...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR GCA 72 bp | TTAATAAGCACACCTACTGAGAGTCCTGTGATATACTaGAATCGCAGTACAACTACCAATAATCTTGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: LISTPTESPVIY*NRSTTTNNLVI Trigger: TATTACAAGATTATTGGTAGTTGTACTGCGATTGCAGTATATCACAGGACTCTCAGTAGGTGTGCTTATTAA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR GCA 72 bp | ATATACAACAGTGACACTCTTGCAAGAAATCAGCTTTaGCCTTCAAAATGTGTTCTGACAATTTTATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: IYNSDTLARNQL*PSKCVLTILCL Trigger: TAGACATAAAATTGTCAGAACACATTTTGAAGGGCAAAGCTGATTTCTTGCAAGAGTGTCACTGTTGTATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| 3UTR CCA 72 bp | TTCTGTTACTCTTTATTCAAAAGTGAGAGACCAACGTaGAGATTCTTTAGCTATAGATCTTGTACTTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FCYSLFKSERPT*RFFSYRSCTCY Trigger: GTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTTTGAATAAAGAGTAACAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR CCA 90 bp | AGAGGACATGGGGTAAGTACTTCACACCCACATGATGGCTCCAGTGTGCTGCTTGGAGAGTCTGATGAGTaGAGGGTCAGCGCAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGHGVSTSHPHDGSSVLLGESDE*RVSAVE Trigger: TTCTACTGCGCTGACCCTCCACTCATCAGACTCTCC...AAGCAGCACACTGGAGCCATCATGTGGGTGTGAAGTACTTACCCCATGTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR TCA 90 bp | TTTATAAAGCCACAATATATCCATATTGCTTTGTGGAAAGGCTTCTCGAGTGTCGGCGGGAATCTATCCTaGTCAACACCATCATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIKPQYIHIALWKGFSSVGGNLS*STPSCQ Trigger: TTGGCATGATGGTGTTGATCAGGATAGATTCCCGCC...GACACTCGAGAAGCCTTTCCACAAAGCAATATGGATATATTGTGGCTTTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR GCA 90 bp | TGTAGAAACTGTGATTTCACAACAGCTGTGCTACCTACACAAGATCTACTCATGCACCTTTGGACATCTTaGTACTGTAAAGCAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRNCDFTTAVLPTQDLLMHLWTS*YCKAKG Trigger: ACCCTTTGCTTTACAGTAGCAAGATGTCCAAAGGTG...CATGAGTAGATCTTGTGTAGGTAGCACAGCTGTTGTGAAATCACAGTTTCTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR GCA 90 bp | CGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCTTCTTTTTGTTGCCATAAAACACAGTCACTaGCACCAGATGAGATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: RGDSLAIDLVLVTLLFVAIKHSH*HQMRST Trigger: TGTGGATCTCATCTGGTGGCAGTGACTGTGTTTTAT...GGCAACAAAAAGAAGAGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTGAGAGACCAACGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTGCACACATACACCTTTaGACATCTTGCTACTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVRDQRGDSLAIDLVLVTAHIHL*TSCYCK Trigger: TTTACAGTAGCAAGATGTCCAAAGGTGTATGTGTGC...AGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACGTTGGTCTCTCACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR CCA 90 bp | CGTGGAGATTCTTTAGCTATAGATCTTGTACTTGTTACTCTTCTTTTTGTTGCCCCAAACATGACAAACTaGCAAGAAAGTAGTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RGDSLAIDLVLVTLLFVAPNMTN*QESSTL Trigger: CAATGTACTACTTTCTTGCCAGTTTGTCATGTTTGG...GGCAACAAAAAGAAGAGTAACAAGTACAAGATCTATAGCTAAAGAATCTCCACG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||
| CDS-3UTR CAA 90 bp | ATAATAATTTATTCTGGCTTATGGTTCCAGTGGTTACTGTTCATTGTGGCTTACAACACAGCAATAATTTaGGACTGCTCCACTGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: IIIYSGLWFQWLLFIVAYNTAII*DCSTDL Trigger: TAAATCAGTGGAGCAGTCCAAAATTATTGCTGTGTT...GTAAGCCACAATGAACAGTAACCACTGGAACCATAAGCCAGAATAAATTATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056849.3 |
||