Pregenerated sensors for OLFR103 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049618Ensembl transcript IDs: ENSMUST00000058826.5, ENSMUST00000173472.3
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACCTGCCCTAGCTCACCACCAAAGAGCTTTCATACTCAGTTACTaGTTCTGCAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: GPALAHHQRAFILSY*FCSLVAQLQALKER Trigger: TCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTATGAAAGCTCTTTGGTGGTGAGCTAGGGCAGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 90 bp | CCCAGCAGGAAGGATTTTGCTGGTTTTGGCCATCTGCATTGGACCTaGCCTAGCTCACCACCAAAGAGCTTTCATACTCAGTTACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: PSRKDFAGFGHLHWT*PSSPPKSFHTQLLL Trigger: AAGCAGTAACTGAGTATGAAAGCTCTTTGGTGGTGAGCTAGGGCAGGTCCAATGCAGATGGCCAAAACCAGCAAAATCCTTCCTGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 90 bp | GCCCTAGCTCACCACCAAAGAGCTTTCATACTCAGTTACTGCTTCTaGAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGAGAGATTTT | + |
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Preference number: 1 (lower is better) Translates to: ALAHHQRAFILSYCF*SLVAQLQALKERDF Trigger: AAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTATGAAAGCTCTTTGGTGGTGAGCTAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR TCA 90 bp | TCTGTAAACCACACTCACAAAGCCAGAAGAGGGCATCAGATGCCTTaGAAATGGAGTTACAGGCAGTTGTGTGTCACCATGGCAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: SVNHTHKARRGHQMP*KWSYRQLCVTMAVL Trigger: AAGCACTGCCATGGTGACACACAACTGCCTGTAACTCCATTTTCAAGGCATCTGATGCCCTCTTCTGGCTTTGTGAGTGTGGTTTACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 90 bp | TTATTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTaGATGTTTGTCTGTAAACCACACTCACAAAGCCAGAAGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LLLLFSSVKKGGGIC*MFVCKPHSQSQKRA Trigger: TGCCCTCTTCTGGCTTTGTGAGTGTGGTTTACAGACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGGAAGGATTTTGCTGGTTTTGGCCATCTGCATTGGACCTGCCCTAGCTGGAGGGGTAAATCTGTaGACTCCATGGGTTCCATTA | + |
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Preference number: 2 (lower is better) Translates to: PAGRILLVLAICIGPALAGGVNL*TPWVPL Trigger: TAATGGAACCCATGGAGTCCACAGATTTACCCCTCC...AGCTAGGGCAGGTCCAATGCAGATGGCCAAAACCAGCAAAATCCTTCCTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCTAGCTCACCACCAAAGAGCTTTCATACTCAGTTACTGCTTCTGCAGCCTTCCAGCAGTTGAGAGGTaGAGGCAAGAACATGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: ALAHHQRAFILSYCFCSLPAVER*RQEHEE Trigger: TTCCTCATGTTCTTGCCTCCACCTCTCAACTGCTGG...AAGGCTGCAGAAGCAGTAACTGAGTATGAAAGCTCTTTGGTGGTGAGCTAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR CAA 90 bp | AGAGCTTTCATACTCAGTTACTGCTTCTGCAGCCTTGTAGCTCAGTaGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTTGACCAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: RAFILSYCFCSLVAQ*QALKERDFSLLTKN Trigger: GTTCTTGGTCAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTATGAAAGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCTAGCTCACCACCAAAGAGCTTTCATACTCAGTTACTGCTTCTGCAGCCTTGAGATTTTTCTCTTTTaGCCAAGAACAAAGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: ALAHHQRAFILSYCFCSLEIFLF*PRTKIS Trigger: GGAGATCTTTGTTCTTGGTCAAAAGAGAAAAATCTC...AAGGCTGCAGAAGCAGTAACTGAGTATGAAAGCTCTTTGGTGGTGAGCTAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR GCA 90 bp | AGATGCCTTGAAAATGGAGTTACAGGCAGTTGTGTGTCACCATGGCAGTGCTTGCCATTTTGTACTGTGTaGACTCATACACTAGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RCLENGVTGSCVSPWQCLPFCTV*THTLEH Trigger: ATGCTCTAGTGTATGAGTGCACACAGTACAAAATGG...CAAGCACTGCCATGGTGACACACAACTGCCTGTAACTCCATTTTCAAGGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTTGACGAAACACTCTCACCTTaGACTGTTTTCCATTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: QPCSSVAGTEGERFFSFDETLSP*TVFHCL Trigger: CAAGCAATGGAAAACAGTCCAAGGTGAGAGTGTTTC...GTCAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCCATCTGCATTGGACCTGCCCTAGCTCACCACCAAAGAGCTTTCATACTAGGGGTGGAAATTCATaGATTTTTGTCTGGCTTAAT | + |
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Preference number: 2 (lower is better) Translates to: FGHLHWTCPSSPPKSFHTRGGNS*IFVWLN Trigger: ATTAAGCCAGACAAAAATCCATGAATTTCCACCCCT...AGTATGAAAGCTCTTTGGTGGTGAGCTAGGGCAGGTCCAATGCAGATGGCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR TCA 90 bp | TTTATTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTATAATCCCAGCAGTTaGGAGGTGGAGGCAAGAACA | + |
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Preference number: 2 (lower is better) Translates to: FIVTVFICEEGRGYLLHVYNPSS*EVEART Trigger: TGTTCTTGCCTCCACCTCTCAACTGCTGGGATTATA...AACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTCAGCAGGAAGGATTTTaGTGGTTTTGGCCATCTGCA | + |
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Preference number: 2 (lower is better) Translates to: FIVTVFICEEGRGYLLHVQQEGF*WFWPSA Trigger: TGCAGATGGCCAAAACCAGCAAAATCCTTCCTGCTG...AACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR TCA 90 bp | TTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTGTCGTGCTTGGAATAGAATaGTATTCAGCTGCTAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLFSSVKKGGGICCMFVVLGIE*YSAAKA Trigger: AGCTTTAGCAGCTGAATATCATTCTATTCCAAGCAC...GACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR GCA 90 bp | TTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTGTCCATTGTGAGTTCATGTaGACAACTGTGTACTCATGT | + |
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Preference number: 2 (lower is better) Translates to: LLLFSSVKKGGGICCMFVHCEFM*TTVYSC Trigger: ACATGAGTACACAGTTGTGCACATGAACTCACAATG...GACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR GCA 90 bp | TTTATTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTAGTGCTTCTAACCAATaGACCATCTCTGCAGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: FIVTVFICEEGRGYLLHVSASNQ*TISAVL Trigger: AAGGACTGCAGAGATGGTGCATTGGTTAGAAGCACT...AACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CCA 90 bp | GAGAAACACTTTGAATCTTTAGACCACAACTATGTGGAATTTTGGCCCAGCAGGTCATACACTAGAGCATaGCCCACATTCTTCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: EKHFESLDHNYVEFWPSRSYTRA*PTFFKK Trigger: TTTCTTGAAGAATGTGGGCCATGCTCTAGTGTATGA...CCTGCTGGGCCAAAATTCCACATAGTTGTGGTCTAAAGATTCAAAGTGTTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTGTCAACTATGTGGAATTTTaGCCCAGCAGGAAGGATTTT | + |
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Preference number: 2 (lower is better) Translates to: LLLFSSVKKGGGICCMFVNYVEF*PSRKDF Trigger: AAAATCCTTCCTGCTGGGCCAAAATTCCACATAGTT...GACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCATGTGCACAACTGTGTACTCATGTCTAATGTATAGCAAACACTGTATACTGTTTTCCATTGCTTaGATGGTGGTAGCTAAGTTA | + |
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Preference number: 2 (lower is better) Translates to: EFMCTTVYSCLMYSKHCILFSIA*MVVAKL Trigger: TAACTTAGCTACCACCATTCAAGCAATGGAAAACAG...TATACAGTGTTTGCTATACATTAGACATGAGTACACAGTTGTGCACATGAACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 72 bp | GGCCCAGCAGGAAGGATTTTGCTGGTTTTGGCCATCTaGATTGGACCTGCCCTAGCTCACCACCAAAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: GPAGRILLVLAI*IGPALAHHQRA Trigger: AGCTCTTTGGTGGTGAGCTAGGGCAGGTCCAATGCAGATGGCCAAAACCAGCAAAATCCTTCCTGCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CAA 90 bp | AGATGCCTTGAAAATGGAGTTACAGGCAGTTGTGTGTCACCATGGCAGTGCTTGAGCCTTGTAGCTCAGTaGCAGGCACTGAAGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RCLENGVTGSCVSPWQCLSLVAQ*QALKER Trigger: TCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCT...CAAGCACTGCCATGGTGACACACAACTGCCTGTAACTCCATTTTCAAGGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 72 bp | CACCACCAAAGAGCTTTCATACTCAGTTACTGCTTCTaGAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: HHQRAFILSYCF*SLVAQLQALKE Trigger: CTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTATGAAAGCTCTTTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR CCA 72 bp | AGCAGGAAGGATTTTGCTGGTTTTGGCCATCTGCATTaGACCTGCCCTAGCTCACCACCAAAGAGCTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SRKDFAGFGHLH*TCPSSPPKSFH Trigger: ATGAAAGCTCTTTGGTGGTGAGCTAGGGCAGGTCCAATGCAGATGGCCAAAACCAGCAAAATCCTTCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR TCA 72 bp | CACACTCACAAAGCCAGAAGAGGGCATCAGATGCCTTaGAAATGGAGTTACAGGCAGTTGTGTGTCACCATG | + |
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Preference number: 3 (lower is better) Translates to: HTHKARRGHQMP*KWSYRQLCVTM Trigger: CATGGTGACACACAACTGCCTGTAACTCCATTTTCAAGGCATCTGATGCCCTCTTCTGGCTTTGTGAGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CAA 90 bp | AGATGCCTTGAAAATGGAGTTACAGGCAGTTGTGTGTCACCATGGCAGTGCTTGAGGATTTTGCTGGTTTaGGCCATCTGCATTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: RCLENGVTGSCVSPWQCLRILLV*AICIGP Trigger: AGGTCCAATGCAGATGGCCAAAACCAGCAAAATCCT...CAAGCACTGCCATGGTGACACACAACTGCCTGTAACTCCATTTTCAAGGCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGGCCATCTGCATTGGACCTGCCCTAGCTCACCACCAAAGAGCTTTCATACTGACACTGAATCCATTTaGTACTGTGTGCACTCATAC | + |
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Preference number: 3 (lower is better) Translates to: FGHLHWTCPSSPPKSFHTDTESI*YCVHSY Trigger: GTATGAGTGCACACAGTACAAAATGGATTCAGTGTC...AGTATGAAAGCTCTTTGGTGGTGAGCTAGGGCAGGTCCAATGCAGATGGCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR TCA 72 bp | CAGTTGTGTGTCACCATGGCAGTGCTTGGAATAGAATaGTATTCAGCTGCTAAAGCTGCCAGTGCTTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: QLCVTMAVLGIE*YSAAKAASASN Trigger: GTTAGAAGCACTGGCAGCTTTAGCAGCTGAATATCATTCTATTCCAAGCACTGCCATGGTGACACACAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 72 bp | CTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTaGATGTTTGTCTGTAAACCACACTCACAAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LFSSVKKGGGIC*MFVCKPHSQSQ Trigger: CTGGCTTTGTGAGTGTGGTTTACAGACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTGTCAGGGCATCAGATGCCTaGAAAATGGAGTTACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LLLFSSVKKGGGICCMFVRASDA*KMELQA Trigger: TGCCTGTAACTCCATTTTCAAGGCATCTGATGCCCT...GACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 72 bp | TTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTaGTGCATGTTTGTCTGTAAACCACACTCACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LLFSSVKKGGGI*CMFVCKPHSQS Trigger: GCTTTGTGAGTGTGGTTTACAGACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR-3UTR CAA 90 bp | TTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTGTCAGAAACACTCTCACCTaGGACTGTTTTCCATTGCTT | + |
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Preference number: 3 (lower is better) Translates to: LLLFSSVKKGGGICCMFVRNTLT*DCFPLL Trigger: AAGCAATGGAAAACAGTCCAAGGTGAGAGTGTTTCT...GACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR GCA 72 bp | TATTCAGCTGCTAAAGCTGCCAGTGCTTCTAACCAATaGACCATCTCTGCAGTCCTTCAAAAATATTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: YSAAKAASASNQ*TISAVLQKYFK Trigger: TTTAAAATATTTTTGAAGGACTGCAGAGATGGTGCATTGGTTAGAAGCACTGGCAGCTTTAGCAGCTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR TCA 90 bp | CCAGCAGGAAGGATTTTGCTGGTTTTGGCCATCTGCATTGGACCTGCCCTAGCTGTCTTGGGTCTAAGATaGCAATCATCAGGATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PAGRILLVLAICIGPALAVLGLR*QSSGWL Trigger: GAGCCATCCTGATGATTGTCATCTTAGACCCAAGAC...AGCTAGGGCAGGTCCAATGCAGATGGCCAAAACCAGCAAAATCCTTCCTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR GCA 90 bp | CAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTTGACCCTGGTCTAAAGAGCTaGCTGAGGTGGGACGGATAT | + |
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Preference number: 4 (lower is better) Translates to: QPCSSVAGTEGERFFSFDPGLKS*LRWDGY Trigger: ATATCCGTCCCACCTCAGGCAGCTCTTTAGACCAGG...GTCAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR CCA 90 bp | CATACTCAGTTACTGCTTCTGCAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGACATGGAGAAAAGCAATaGTCCAGATGGTCACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HTQLLLLQPCSSVAGTEGHGEKQ*SRWSQP Trigger: TGGCTGTGACCATCTGGACCATTGCTTTTCTCCATG...TCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR GCA 90 bp | TTTGGCCATCTGCATTGGACCTGCCCTAGCTCACCACCAAAGAGCTTTCATACTTCCCAAGAGGGAAATTaGTTTGTTTGTAGAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FGHLHWTCPSSPPKSFHTSQEGN*FVCREK Trigger: CTTCTCTCTACAAACAAAGCAATTTCCCTCTTGGGA...AGTATGAAAGCTCTTTGGTGGTGAGCTAGGGCAGGTCCAATGCAGATGGCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR TCA 90 bp | TTGTTACTGTTTTCATCTGTGAAGAAGGGAGGGGGTATTTGCTGCATGTTTGTCTGGGACGGATATAGGTaGAGAGAACAGGAGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFSSVKKGGGICCMFVWDGYR*REQEHR Trigger: TCTATGCTCCTGTTCTCTTCACCTATATCCGTCCCA...GACAAACATGCAGCAAATACCCCCTCCCTTCTTCACAGATGAAAACAGTAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR GCA 90 bp | AGATGCCTTGAAAATGGAGTTACAGGCAGTTGTGTGTCACCATGGCAGTGCTTGAATGAAGCTGAGTTATaGATCCCAAGAGGGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: RCLENGVTGSCVSPWQCLNEAEL*IPRGKL Trigger: CAATTTCCCTCTTGGGATGCATAACTCAGCTTCATT...CAAGCACTGCCATGGTGACACACAACTGCCTGTAACTCCATTTTCAAGGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTTGACGTTCTCCAGCATTTTTaGCACTGTTACAGTGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: QPCSSVAGTEGERFFSFDVLQHF*HCYSGV Trigger: TACTCCACTGTAACAGTGCCAAAAATGCTGGAGAAC...GTCAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR CAA 72 bp | ATACTCAGTTACTGCTTCTGCAGCCTTGTAGCTCAGTaGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: ILSYCFCSLVAQ*QALKERDFSLL Trigger: CAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR CCA 90 bp | GAGAAACACTTTGAATCTTTAGACCACAACTATGTGGAATTTTGGCCCAGCAGGTTGGCACTGTTACAGTaGAGTAGGAGATATCTAGAC | + |
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Preference number: 4 (lower is better) Translates to: EKHFESLDHNYVEFWPSRLALLQ*SRRYLD Trigger: GTCTAGATATCTCCTACTCCACTGTAACAGTGCCAA...CCTGCTGGGCCAAAATTCCACATAGTTGTGGTCTAAAGATTCAAAGTGTTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR GCA 90 bp | GAGAAACACTTTGAATCTTTAGACCACAACTATGTGGAATTTTGGCCCAGCAGGATAAGGATACAGACCTaGCAATTCATGATGACAGAA | + |
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Preference number: 4 (lower is better) Translates to: EKHFESLDHNYVEFWPSRIRIQT*QFMMTE Trigger: TTCTGTCATCATGAATTGGCAGGTCTGTATCCTTAT...CCTGCTGGGCCAAAATTCCACATAGTTGTGGTCTAAAGATTCAAAGTGTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR CAA 72 bp | CAGTTGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTaGACCAAGAACAAAGATCTCCTCCATCATAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: QLQALKERDFSL*TKNKDLLHHKV Trigger: AACTTTATGATGGAGGAGATCTTTGTTCTTGGTCAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| 3UTR CAA 72 bp | GGTGGAAATTCATGGATTTTTGTCTGGCTTAATCTTTaGAAAGACTGTAATTCAGTCCCAACCATTGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: GGNSWIFVWLNL*KDCNSVPTIVS Trigger: ACTCACAATGGTTGGGACTGAATTACAGTCTTTCAAAAGATTAAGCCAGACAAAAATCCATGAATTTCCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR CAA 90 bp | CATACTCAGTTACTGCTTCTGCAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGGTTCTCCAGCATTTTaGGCACTGTTACAGTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HTQLLLLQPCSSVAGTEGGSPAF*ALLQWS Trigger: ACTCCACTGTAACAGTGCCAAAAATGCTGGAGAACC...TCCTTCAGTGCCTGCAACTGAGCTACAAGGCTGCAGAAGCAGTAACTGAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS-3UTR CAA 90 bp | CAGCCTTGTAGCTCAGTTGCAGGCACTGAAGGAGAGAGATTTTTCTCTTTTGACTTAAGCAGCCAAAGGTaGAGCTCAGTGTTTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: QPCSSVAGTEGERFFSFDLSSQR*SSVFPQ Trigger: CTGTGGAAACACTGAGCTCAACCTTTGGCTGCTTAA...GTCAAAAGAGAAAAATCTCTCTCCTTCAGTGCCTGCAACTGAGCTACAAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173472.3 |
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| CDS TCA 72 bp | GGTCTAAAGAGCTGCCTGAGGTGGGACGGATATAGGTaGAGAGAACAGGAGCATAGAACAGAACAACAACCA | + |
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Preference number: 6 (lower is better) Translates to: GLKSCLRWDGYR*REQEHRTEQQP Trigger: TGGTTGTTGTTCTGTTCTATGCTCCTGTTCTCTTCACCTATATCCGTCCCACCTCAGGCAGCTCTTTAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058826.5 ENSMUST00000173472.3 |
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| CDS TCA 72 bp | AGACCACAGAAGCTCAAACGAGATGTCATTACAGAATaGAGCAAGGCATGGAGAAAAGCAATGGTCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RPQKLKRDVITE*SKAWRKAMVQM Trigger: CATCTGGACCATTGCTTTTCTCCATGCCTTGCTTCATTCTGTAATGACATCTCGTTTGAGCTTCTGTGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058826.5 ENSMUST00000173472.3 |
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| CDS CAA 72 bp | GGTGAAGAAAATAGCAAAGAGAAAGGGCTGTGGTTCTaGTATGTCTCTCACTCCCAAAAGGATAAATTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GEENSKEKGLWF*YVSHSQKDKFC Trigger: ACAGAATTTATCCTTTTGGGAGTGAGAGACATACAAGAACCACAGCCCTTTCTCTTTGCTATTTTCTTCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058826.5 ENSMUST00000173472.3 |
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