Pregenerated sensors for OLFR1029 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059873Ensembl transcript IDs: ENSMUST00000082191.5, ENSMUST00000217244.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAAACTGTCAGGTGAAGATGACAGTAAATGTGATCTCCCAACCTaGGTCTTAATAGACGGCAGGCTTACAAAACATGGAATCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: SKLSGEDDSKCDLPT*VLIDGRLTKHGILD Trigger: GTCCAGGATTCCATGTTTTGTAAGCCTGCCGTCTATTAAGACTCAGGTTGGGAGATCACATTTACTGTCATCTTCACCTGACAGTTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 90 bp | CACACAGATCTGAGGAGGAATGAGATTCAGTGTTTTAATATGTGCTaGAGTGATATCTATGCTACTAGTTGGCATCAATTGCTGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTDLRRNEIQCFNMC*SDIYATSWHQLLCS Trigger: AGAGCACAGCAATTGATGCCAACTAGTAGCATAGATATCACTGCAGCACATATTAAAACACTGAATCTCATTCCTCCTCAGATCTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 90 bp | CAGTTTTACATATACAAAAGTATGACCGCTCAGTTTCATGCTACTTaGACAACTCCTTCTCCACAGAGGCACATCAGTGAGCAACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: QFYIYKSMTAQFHAT*TTPSPQRHISEQQK Trigger: TTTTTGTTGCTCACTGATGTGCCTCTGTGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTCATACTTTTGTATATGTAAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 90 bp | GCAGTGATATCTATGCTACTAGTTGGCATCAATTGCTGTGCTCTTTaGTATGAGAAAACATCTCACAAAAGTAACATAAGAGAAGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: AVISMLLVGINCCAL*YEKTSHKSNIREGG Trigger: TCCTCCTTCTCTTATGTTACTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAGTAGCATAGATATCACTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 90 bp | AATAGGGCTGTTGATATATTCAGCTCCCTAGGCAATAAAACATTCTaGGAGAAAGATCTGGATTGCTCGATTTATTCATCTGATCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: NRAVDIFSSLGNKTF*EKDLDCSIYSSDPE Trigger: TTCAGGATCAGATGAATAAATCGAGCAATCCAGATCTTTCTCTCAGAATGTTTTATTGCCTAGGGAGCTGAATATATCAACAGCCCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 90 bp | TTAATATGTGCTGCAGTGATATCTATGCTACTAGTTGGCATCAATTaGTGTGCTCTTTGCTATGAGAAAACATCTCACAAAAGTAACATA | + |
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Preference number: 1 (lower is better) Translates to: LICAAVISMLLVGIN*CALCYEKTSHKSNI Trigger: TATGTTACTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAGTAGCATAGATATCACTGCAGCACATATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGTTTCATGCTACTTGCACAACTCCTTCTCCACAGAGGCACATCAGTGAGCTGTGCTCTTTGCTATaGGAAAACATCTCACAAAAG | + |
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Preference number: 2 (lower is better) Translates to: AQFHATCTTPSPQRHISELCSLL*ENISQK Trigger: CTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAG...CTCACTGATGTGCCTCTGTGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGGTTTTAGCCATTACTCTCGGACCAACATCTTCTAAACTGTCAGGTGAAGACCGCTCAGTTTCATaGTACTTGCACAACTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FLVLAITLGPTSSKLSGEDRSVS*YLHNSF Trigger: GAAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTC...TTCACCTGACAGTTTAGAAGATGTTGGTCCGAGAGTAATGGCTAAAACCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGGTTTTAGCCATTACTCTCGGACCAACATCTTCTAAACTGTCAGGTGAATTTTCATGCAGTTCATaGCACCAGGTAAGGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: FLVLAITLGPTSSKLSGEFSCSS*HQVRRW Trigger: CCATCTCCTTACCTGGTGTCATGAACTGCATGAAAA...TTCACCTGACAGTTTAGAAGATGTTGGTCCGAGAGTAATGGCTAAAACCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR-3UTR GCA 90 bp | ATATACAAAAGTATGACCGCTCAGTTTCATGCTACTTGCACAACTCCTTCTCCACAGTGTTTTAATATGTaGTGCAGTGATATCTATGCT | + |
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Preference number: 2 (lower is better) Translates to: IYKSMTAQFHATCTTPSPQCFNM*CSDIYA Trigger: AGCATAGATATCACTGCAGCACATATTAAAACACTG...TGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTCATACTTTTGTATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGATTGCTCGATTTATTCATCTGATCCTGAAGCTTTGATATTTTGTACTGCCCAAAACATGGAATCCTaGACCCACAGTTTTACATAT | + |
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Preference number: 2 (lower is better) Translates to: LDCSIYSSDPEALIFCTAQNMES*THSFTY Trigger: ATATGTAAAACTGTGGGTCCAGGATTCCATGTTTTG...GGCAGTACAAAATATCAAAGCTTCAGGATCAGATGAATAAATCGAGCAATCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | CGATTTCTGAGTTCGAGGCCAGCCTGGTCTATAGAGTaGGTTCTAGGACAGTCAGGGCTACACAGAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: RFLSSRPAWSIE*VLGQSGLHRET Trigger: GGTTTCTCTGTGTAGCCCTGACTGTCCTAGAACTCACTCTATAGACCAGGCTGGCCTCGAACTCAGAAATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | ATATACAAAAGTATGACCGCTCAGTTTCATGCTACTTaGACAACTCCTTCTCCACAGAGGCACATCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: IYKSMTAQFHAT*TTPSPQRHISE Trigger: CTCACTGATGTGCCTCTGTGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTCATACTTTTGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | ATTCTAAGAGGAGTTAGTAAGGAAATGACCAGTCAATaGAATAGCCTCACTGTCTGCTACGGCTTACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: ILRGVSKEMTSQ*NSLTVCYGLLP Trigger: AGGCAGTAAGCCGTAGCAGACAGTGAGGCTATTGCATTGACTGGTCATTTCCTTACTAACTCCTCTTAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | GAATGTGCCTTCCTCTGTTCATTTTCATGCAGTTCATaGCACCAGGTAAGGAGATGGTTAGGTGTACTTTCA | + |
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Preference number: 3 (lower is better) Translates to: ECAFLCSFSCSS*HQVRRWLGVLS Trigger: TGAAAGTACACCTAACCATCTCCTTACCTGGTGTCATGAACTGCATGAAAATGAACAGAGGAAGGCACATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | TACTTGCACAACTCCTTCTCCACAGAGGCACATCAGTaGGCAACAAAAATCACTATCAGGATGCATTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: YLHNSFSTEAHQ*ATKITIRMHFL Trigger: GAGAAAATGCATCCTGATAGTGATTTTTGTTGCTCACTGATGTGCCTCTGTGGAGAAGGAGTTGTGCAAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | TCAGGTGAAGATGACAGTAAATGTGATCTCCCAACCTaGGTCTTAATAGACGGCAGGCTTACAAAACATGGA | + |
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Preference number: 3 (lower is better) Translates to: SGEDDSKCDLPT*VLIDGRLTKHG Trigger: TCCATGTTTTGTAAGCCTGCCGTCTATTAAGACTCAGGTTGGGAGATCACATTTACTGTCATCTTCACCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | GAATCCTGGACCCACAGTTTTACATATACAAAAGTATaGCCGCTCAGTTTCATGCTACTTGCACAACTCCTT | + |
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Preference number: 3 (lower is better) Translates to: ESWTHSFTYTKV*PLSFMLLAQLL Trigger: AAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTCATACTTTTGTATATGTAAAACTGTGGGTCCAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | GTTTTACATATACAAAAGTATGACCGCTCAGTTTCATaGTACTTGCACAACTCCTTCTCCACAGAGGCACAT | + |
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Preference number: 3 (lower is better) Translates to: VLHIQKYDRSVS*YLHNSFSTEAH Trigger: ATGTGCCTCTGTGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTCATACTTTTGTATATGTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | GGACCTGTCTACAACATGGATATGAACACACAGATCTaGGGAGGAATGAGATTCAGTGTTTTAATATGTGCT | + |
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Preference number: 3 (lower is better) Translates to: GPVYNMDMNTQI*GGMRFSVLICA Trigger: AGCACATATTAAAACACTGAATCTCATTCCTCCTCAGATCTGTGTGTTCATATCCATGTTGTAGACAGGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | GCTGCAGTGATATCTATGCTACTAGTTGGCATCAATTaGTGTGCTCTTTGCTATGAGAAAACATCTCACAAA | + |
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Preference number: 3 (lower is better) Translates to: AAVISMLLVGIN*CALCYEKTSHK Trigger: TTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAGTAGCATAGATATCACTGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | CTGAGGAGGAATGAGATTCAGTGTTTTAATATGTGCTaGAGTGATATCTATGCTACTAGTTGGCATCAATTG | + |
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Preference number: 3 (lower is better) Translates to: LRRNEIQCFNMC*SDIYATSWHQL Trigger: CAATTGATGCCAACTAGTAGCATAGATATCACTGCAGCACATATTAAAACACTGAATCTCATTCCTCCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | GATCTGAGGAGGAATGAGATTCAGTGTTTTAATATGTaGTGCAGTGATATCTATGCTACTAGTTGGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: DLRRNEIQCFNM*CSDIYATSWHQ Trigger: TTGATGCCAACTAGTAGCATAGATATCACTGCAGCACATATTAAAACACTGAATCTCATTCCTCCTCAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | GTTGATATATTCAGCTCCCTAGGCAATAAAACATTCTaGGAGAAAGATCTGGATTGCTCGATTTATTCATCT | + |
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Preference number: 3 (lower is better) Translates to: VDIFSSLGNKTF*EKDLDCSIYSS Trigger: AGATGAATAAATCGAGCAATCCAGATCTTTCTCTCAGAATGTTTTATTGCCTAGGGAGCTGAATATATCAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR TCA 72 bp | TACATGAAGACCATATGGTTTATCTTATTTTTATGGTaGAATAGGGCTGTTGATATATTCAGCTCCCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: YMKTIWFILFLW*NRAVDIFSSLG Trigger: GCCTAGGGAGCTGAATATATCAACAGCCCTATTTCACCATAAAAATAAGATAAACCATATGGTCTTCATGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR GCA 72 bp | TCTATGCTACTAGTTGGCATCAATTGCTGTGCTCTTTaGTATGAGAAAACATCTCACAAAAGTAACATAAGA | + |
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Preference number: 3 (lower is better) Translates to: SMLLVGINCCAL*YEKTSHKSNIR Trigger: TCTTATGTTACTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAGTAGCATAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS-3UTR GCA 90 bp | GCTCAGTTTCATGCTACTTGCACAACTCCTTCTCCACAGAGGCACATCAGTGAGACATGGCCAAGCAGATaGAGACTCGCCTGGACATTT | + |
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Preference number: 4 (lower is better) Translates to: AQFHATCTTPSPQRHISETWPSR*RLAWTF Trigger: AAATGTCCAGGCGAGTCTGCATCTGCTTGGCCATGT...CTCACTGATGTGCCTCTGTGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS-3UTR CCA 90 bp | CTAGTTGGCATCAATTGCTGTGCTCTTTGCTATGAGAAAACATCTCACAAAAGTGAGAGGCTGGAGTTCTaGGCGATCTGTGAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LVGINCCALCYEKTSHKSERLEF*AICEPQ Trigger: CTGGGGCTCACAGATCGCCCAGAACTCCAGCCTCTC...ACTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS-3UTR GCA 90 bp | CTAGTTGGCATCAATTGCTGTGCTCTTTGCTATGAGAAAACATCTCACAAAAGTCTCTGTAAGGAGAAGTaGAATGAAAAGGTAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LVGINCCALCYEKTSHKSLCKEK*NEKVAL Trigger: CAGTGCTACCTTTTCATTGCACTTCTCCTTACAGAG...ACTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS-3UTR GCA 90 bp | ATATACAAAAGTATGACCGCTCAGTTTCATGCTACTTGCACAACTCCTTCTCCAGTGGTCTTACATACATaGAGAAGAGTGTCCCATAAA | + |
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Preference number: 4 (lower is better) Translates to: IYKSMTAQFHATCTTPSPVVLHT*RRVSHK Trigger: TTTATGGGACACTCTTCTGCATGTATGTAAGACCAC...TGGAGAAGGAGTTGTGCAAGTAGCATGAAACTGAGCGGTCATACTTTTGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR CAA 72 bp | ATTTGTCACCGTATGATCACACTCAGGAAGCATAAGTaGAATGTGCCTTCCTCTGTTCATTTTCATGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ICHRMITLRKHK*NVPSSVHFHAV Trigger: AACTGCATGAAAATGAACAGAGGAAGGCACATTCAACTTATGCTTCCTGAGTGTGATCATACGGTGACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS-3UTR GCA 90 bp | CTGGATTGCTCGATTTATTCATCTGATCCTGAAGCTTTGATATTTTGTACTGCCGTCCTGATGACGTTTTaGCTGAGTATTGTTTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LDCSIYSSDPEALIFCTAVLMTF*LSIVFK Trigger: CTTGAAAACAATACTCAGGCAAAACGTCATCAGGAC...GGCAGTACAAAATATCAAAGCTTCAGGATCAGATGAATAAATCGAGCAATCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| 3UTR CAA 72 bp | ACTGAATGGTATTTCTCAGAGAACCAATATATCCTGTaGACTCCTTTAAACAAGTTCACAGCAGGGATACAG | + |
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Preference number: 4 (lower is better) Translates to: TEWYFSENQYIL*TPLNKFTAGIQ Trigger: CTGTATCCCTGCTGTGAACTTGTTTAAAGGAGTCAACAGGATATATTGGTTCTCTGAGAAATACCATTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS GCA 90 bp | AGTTTGTTGGAAGGTGGACGCATCAATGCTGTCCTGATGACGTTTTaGCTGAGTATTGTTTTCAAGGCCTGCTTTACATCTTTATTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLLEGGRINAVLMTF*LSIVFKACFTSLFL Trigger: GAGGAATAAAGATGTAAAGCAGGCCTTGAAAACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTCCAACAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS-3UTR CAA 90 bp | CTAGTTGGCATCAATTGCTGTGCTCTTTGCTATGAGAAAACATCTCACAAAAGTCAAGTAGAGAATGCCTaGCGTCTTCCTTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: LVGINCCALCYEKTSHKSQVENA*RLPSAD Trigger: ATCAGCTGAAGGAAGACGCAAGGCATTCTCTACTTG...ACTTTTGTGAGATGTTTTCTCATAGCAAAGAGCACAGCAATTGATGCCAACTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS CCA 90 bp | GATTCAGCAGAGGACTTACAAAGGTGTAGAAGACAGCTATTATTTTaGATTCTTCAACAGTCTTGTCAGTGGGTGGTCTTACATACATGC | + |
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Preference number: 5 (lower is better) Translates to: DSAEDLQRCRRQLLF*ILQQSCQWVVLHTC Trigger: GCATGTATGTAAGACCACCCACTGACAAGACTGTTGAAGAATCCAAAATAATAGCTGTCTTCTACACCTTTGTAAGTCCTCTGCTGAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS-3UTR CAA 90 bp | CTGGATTGCTCGATTTATTCATCTGATCCTGAAGCTTTGATATTTTGTACTGCCTATTGGTGCAGTTTGTaGGAAGGTGGACGCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: LDCSIYSSDPEALIFCTAYWCSL*EGGRIN Trigger: ATTGATGCGTCCACCTTCCAACAAACTGCACCAATA...GGCAGTACAAAATATCAAAGCTTCAGGATCAGATGAATAAATCGAGCAATCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS-3UTR CAA 90 bp | ACAAGTACACGTTTCCTCAGGTTAACATCTCTAGATGTATCTATACAACAGAGAGATTCTTCAACAGTCTaGTCAGTGGGTGGTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: TSTRFLRLTSLDVSIQQRDSSTV*SVGGLT Trigger: TGTAAGACCACCCACTGACAAGACTGTTGAAGAATC...TCTCTGTTGTATAGATACATCTAGAGATGTTAACCTGAGGAAACGTGTACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217244.2 |
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| CDS GCA 72 bp | AGAAGCCATAGATATAAGGACACATGGCCAAGCAGATaGAGACTCGCCTGGACATTTTCACACTGTAACGCA | + |
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Preference number: 6 (lower is better) Translates to: RSHRYKDTWPSR*RLAWTFSHCNA Trigger: TGCGTTACAGTGTGAAAATGTCCAGGCGAGTCTGCATCTGCTTGGCCATGTGTCCTTATATCTATGGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS CAA 72 bp | GGAAGGTGGACGCATCAATGCTGTCCTGATGACGTTTaGCCTGAGTATTGTTTTCAAGGCCTGCTTTACATC | + |
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Preference number: 6 (lower is better) Translates to: GRWTHQCCPDDV*PEYCFQGLLYI Trigger: GATGTAAAGCAGGCCTTGAAAACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS GCA 72 bp | GAAGGTGGACGCATCAATGCTGTCCTGATGACGTTTTaGCTGAGTATTGTTTTCAAGGCCTGCTTTACATCT | + |
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Preference number: 6 (lower is better) Translates to: EGGRINAVLMTF*LSIVFKACFTS Trigger: AGATGTAAAGCAGGCCTTGAAAACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS CAA 90 bp | CAGTTTGTTGGAAGGTGGACGCATCAATGCTGTCCTGATGACGTTTaGCCTGAGTATTGTTTTCAAGGCCTGCTTTACATCTTTATTCCT | + |
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Preference number: 6 (lower is better) Translates to: QFVGRWTHQCCPDDV*PEYCFQGLLYIFIP Trigger: AGGAATAAAGATGTAAAGCAGGCCTTGAAAACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTCCAACAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS GCA 72 bp | TTATTGGTGCAGTTTGTTGGAAGGTGGACGCATCAATaGTGTCCTGATGACGTTTTGCCTGAGTATTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LLVQFVGRWTHQ*CPDDVLPEYCF Trigger: AAAACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTCCAACAAACTGCACCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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| CDS CCA 72 bp | GAGGACTTACAAAGGTGTAGAAGACAGCTATTATTTTaGATTCTTCAACAGTCTTGTCAGTGGGTGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: EDLQRCRRQLLF*ILQQSCQWVVL Trigger: TAAGACCACCCACTGACAAGACTGTTGAAGAATCCAAAATAATAGCTGTCTTCTACACCTTTGTAAGTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082191.5 ENSMUST00000217244.2 |
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