Pregenerated sensors for OLFR1028 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057207Ensembl transcript IDs: ENSMUST00000080698.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAACAATCACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTaGGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: ETITHGRSYRDKVWS*DKRMDHLETAISRD Trigger: ATCCCTGGATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CCA 90 bp | AGTGTGGACACTTTGCCCCTTCTTAGAATTGGAAACAATCACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SVDTLPLLRIGNNHP*KELQRQSLELRQKD Trigger: ATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR TCA 90 bp | GAAGTAGGAAGGAGAGAGGTACCCTGTGTTCATACTCAGGAAGCATaGGTTGAATGTGCCTTCTTTTGTTCATTTTATGCAGTTCATGAC | + |
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Preference number: 1 (lower is better) Translates to: EVGRREVPCVHTQEA*VECAFFCSFYAVHD Trigger: GTCATGAACTGCATAAAATGAACAAAAGAAGGCACATTCAACTCATGCTTCCTGAGTATGAACACAGGGTACCTCTCTCCTTCCTACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | CACAGCAGGTGGCCCAGCCTCAGTGGAGTACAGTCTGAACCAGCCTGCTTAGGCATATGTGGGGAAATGTaGAAGGTGAAAATGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: HSRWPSLSGVQSEPACLGICGEM*KVKMVD Trigger: ATCCACCATTTTCACCTTTCACATTTCCCCACATAT...GCCTAAGCAGGCTGGTTCAGACTGTACTCCACTGAGGCTGGGCCACCTGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR CCA 90 bp | CACAGCAGGTGGCCCAGCCTCAGTGGAGTACAGTCTGAACCAGCCTGCTTAGGCAATAGACACAATTCTTaGTGCATATGTGTGCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HSRWPSLSGVQSEPACLGNRHNS*CICVRV Trigger: CACACGCACACATATGCACCAAGAATTGTGTCTATT...GCCTAAGCAGGCTGGTTCAGACTGTACTCCACTGAGGCTGGGCCACCTGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR CCA 90 bp | ACCAGCACAGCAGGTGGCCCAGCCTCAGTGGAGTACAGTCTGAACCAGCCTGCTAAGAGAGAGGTGGTTTaGACATTTTGTGTACACACT | + |
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Preference number: 2 (lower is better) Translates to: TSTAGGPASVEYSLNQPAKREVV*TFCVHT Trigger: AGTGTGTACACAAAATGTCCAAACCACCTCTCTCTT...AGCAGGCTGGTTCAGACTGTACTCCACTGAGGCTGGGCCACCTGCTGTGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCACAGCAGGTGGCCCAGCCTCAGTGGAGTACAGTCTGAACCAGCCTGCTTATTTGAAAAGGACATaGGGAATATGTGGGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: TSTAGGPASVEYSLNQPAYLKRT*GICGEM Trigger: CATTTCCCCACATATTCCTCATGTCCTTTTCAAATA...AGCAGGCTGGTTCAGACTGTACTCCACTGAGGCTGGGCCACCTGCTGTGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 90 bp | AGAATTGGAAACAATCACCCATGGAAGGAGTTACAGAGACAAAGTTaGGAGCTGAGACAAAAGGATGGACCATCTAGAGACTGCCATATC | + |
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Preference number: 2 (lower is better) Translates to: RIGNNHPWKELQRQS*ELRQKDGPSRDCHI Trigger: GATATGGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 90 bp | AGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGAAACAATCACCCATGGAAGGAGTTACAGAGACAAAGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: RRTKTKVWTLCPFLE*ETITHGRSYRDKVW Trigger: CCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAGAAACTTGCCAAACTCACAGTTTGAGGTTAACTCCAGAAAATCTTGAACCAGCCTGCTTAGGCTaGAGGAGGTTACATTCACTA | + |
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Preference number: 2 (lower is better) Translates to: LAETCQTHSLRLTPENLEPACLG*RRLHSL Trigger: TAGTGAATGTAACCTCCTTCAGCCTAAGCAGGCTGG...TTCAAGATTTTCTGGAGTTAACCTCAAACTGTGAGTTTGGCAAGTTTCTGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 90 bp | AGTTGTCAGAACAGCCTTTTAGCAGAAACTTGCCAAACTCACAGTTaGAGGTTAACTCCAGAAAATCTTGAAGAACCAGTTAGGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SCQNSLLAETCQTHS*RLTPENLEEPVRPH Trigger: ATGAGGCCTAACTGGTTCTTCAAGATTTTCTGGAGTTAACCTCAAACTGTGAGTTTGGCAAGTTTCTGCTAAAAGGCTGTTCTGACAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR GCA 90 bp | TGTAGAGATGTGAAGTTGTCAGAACAGCCTTTTAGCAGAAACTTGCCAAACTCAAGACACAATTCTTGGTaGATATGTGTGCGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: CRDVKLSEQPFSRNLPNSRHNSW*ICVRVC Trigger: ACACACACGCACACATATGCACCAAGAATTGTGTCT...TGAGTTTGGCAAGTTTCTGCTAAAAGGCTGTTCTGACAACTTCACATCTCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGAAACAATCACCCATGGACTAGACATGCTTTCTTaGCTAAGCTTAATCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: TKVWTLCPFLELETITHGLDMLS*LSLISM Trigger: CATAGAGATTAAGCTTAGGCAAGAAAGCATGTCTAG...TCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAGATGTGAAGTTGTCAGAACAGCCTTTTAGCAGAAACTTGCCAAACTCAACAGAGAAAGAGATATaGCTCCTAGGTGGTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: CRDVKLSEQPFSRNLPNSTEKEI*LLGGFQ Trigger: TTGAAAACCACCTAGGAGTCATATCTCTTTCTCTGT...TGAGTTTGGCAAGTTTCTGCTAAAAGGCTGTTCTGACAACTTCACATCTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAGAGATGTGAAGTTGTCAGAACAGCCTTTTAGCAGAAACTTGCCAAACTCAATTTTATGCAGTTCATaGCACCAAGTAAGGGGATGT | + |
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Preference number: 2 (lower is better) Translates to: CRDVKLSEQPFSRNLPNSILCSS*HQVRGC Trigger: ACATCCCCTTACTTGGTGTCATGAACTGCATAAAAT...TGAGTTTGGCAAGTTTCTGCTAAAAGGCTGTTCTGACAACTTCACATCTCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAGAAACTTGCCAAACTCACAGTTTGAGGTTAACTCCAGAAAATCTTGAATCAGGAAGCATGAGTTaGATGTGCCTTCTTTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LAETCQTHSLRLTPENLESGSMS*MCLLLF Trigger: GAACAAAAGAAGGCACATTCAACTCATGCTTCCTGA...TTCAAGATTTTCTGGAGTTAACCTCAAACTGTGAGTTTGGCAAGTTTCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAGAAACTTGCCAAACTCACAGTTTGAGGTTAACTCCAGAAAATCTTGAACATACTCAGGAAGCATaGGTTGAATGTGCCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LAETCQTHSLRLTPENLEHTQEA*VECAFF Trigger: AAAGAAGGCACATTCAACTCATGCTTCCTGAGTATG...TTCAAGATTTTCTGGAGTTAACCTCAAACTGTGAGTTTGGCAAGTTTCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTTATGCAATAATATCTCTGTTACTAGTTTGCATCAACAGTTGTGCTCATCTCAAGCCATTTGTATaGTGCAACCCCTTTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: TAYAIISLLLVCINSCAHLKPFV*CNPFPR Trigger: TCTAGGAAAGGGGTTGCAGCATACAAATGGCTTGAG...ATGAGCACAACTGTTGATGCAAACTAGTAACAGAGATATTATTGCATAAGCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR GCA 90 bp | ACATTCACTAAGACTAGTCTTTCTCCAAATATGACATACCTATCAATCTCCTTGATGTGTGCGTGTGTGTaGATGAATGTCTTGTATATG | + |
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Preference number: 2 (lower is better) Translates to: TFTKTSLSPNMTYLSISLMCACV*MNVLYM Trigger: CATATACAAGACATTCATGCACACACACGCACACAT...CAAGGAGATTGATAGGTATGTCATATTTGGAGAAAGACTAGTCTTAGTGAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR TCA 72 bp | GCACAGCAGGTGGCCCAGCCTCAGTGGAGTACAGTCTaGACCAGCCTGCTTAGGCTGAAGGAGGTTACATTC | + |
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Preference number: 3 (lower is better) Translates to: AQQVAQPQWSTV*TSLLRLKEVTF Trigger: GAATGTAACCTCCTTCAGCCTAAGCAGGCTGGTTCAGACTGTACTCCACTGAGGCTGGGCCACCTGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CCA 72 bp | GAAAATCTTGAAGAACCAGTTAGGCCTCATGGCAGGTaGCAGGCAGTGTCACATCAAAGGAGAGTGATGAGA | + |
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Preference number: 3 (lower is better) Translates to: ENLEEPVRPHGR*QAVSHQRRVMR Trigger: TCTCATCACTCTCCTTTGATGTGACACTGCCTGCCACCTGCCATGAGGCCTAACTGGTTCTTCAAGATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR TCA 72 bp | CTCAGTGGAGTACAGTCTGAACCAGCCTGCTTAGGCTaGAGGAGGTTACATTCACTAAGACTAGTCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LSGVQSEPACLG*RRLHSLRLVFL Trigger: GAGAAAGACTAGTCTTAGTGAATGTAACCTCCTTCAGCCTAAGCAGGCTGGTTCAGACTGTACTCCACTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CCA 72 bp | ACTTTGCCCCTTCTTAGAATTGGAAACAATCACCCATaGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: TLPLLRIGNNHP*KELQRQSLELR Trigger: TCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR TCA 72 bp | AGGAGAGAGGTACCCTGTGTTCATACTCAGGAAGCATaGGTTGAATGTGCCTTCTTTTGTTCATTTTATGCA | + |
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Preference number: 3 (lower is better) Translates to: RREVPCVHTQEA*VECAFFCSFYA Trigger: TGCATAAAATGAACAAAAGAAGGCACATTCAACTCATGCTTCCTGAGTATGAACACAGGGTACCTCTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR TCA 72 bp | TTTGCTGAAAGGGCCAAGTTTCTTGATGTAGAGATGTaGAGTTGTCAGAACAGCCTTTTAGCAGAAACTTGC | + |
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Preference number: 3 (lower is better) Translates to: FAERAKFLDVEM*SCQNSLLAETC Trigger: GCAAGTTTCTGCTAAAAGGCTGTTCTGACAACTTCACATCTCTACATCAAGAAACTTGGCCCTTTCAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR CAA 90 bp | CTAGGTTATTCTCACTCTAGTCAAATGAACCATATACACTGGCTACCACTATTCTTCATGGCTACTAGTTaGCATCAATTGCTGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGYSHSSQMNHIHWLPLFFMATS*HQLLCS Trigger: AGAGCACAGCAATTGATGCAAACTAGTAGCCATGAA...GAATAGTGGTAGCCAGTGTATATGGTTCATTTGACTAGAGTGAGAATAACCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR CAA 90 bp | ACATTCACTAAGACTAGTCTTTCTCCAAATATGACATACCTATCAATCTCCTTGCAAGAGAGAGGTGGTTaGGACATTTTGTGTACACAC | + |
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Preference number: 3 (lower is better) Translates to: TFTKTSLSPNMTYLSISLQERGG*DILCTH Trigger: GTGTGTACACAAAATGTCCAAACCACCTCTCTCTTG...CAAGGAGATTGATAGGTATGTCATATTTGGAGAAAGACTAGTCTTAGTGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR CAA 90 bp | GTGCATATGTGTGTGATATTATTTGAAAAGGACATGAGGAATATGTGGGGAAATCTCAGGAAGCATGAGTaGAATGTGCCTTCTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: VHMCVILFEKDMRNMWGNLRKHE*NVPSFV Trigger: AACAAAAGAAGGCACATTCAACTCATGCTTCCTGAG...ATTTCCCCACATATTCCTCATGTCCTTTTCAAATAATATCACACACATATGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTTATGCAATAATATCTCTGTTACTAGTTTGCATCAACAGTTGTGCTCATTCAATTGCTGTGCTCTaGGCTATGAGAAAACATCTC | + |
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Preference number: 3 (lower is better) Translates to: TAYAIISLLLVCINSCAHSIAVL*AMRKHL Trigger: GAGATGTTTTCTCATAGCCAAGAGCACAGCAATTGA...ATGAGCACAACTGTTGATGCAAACTAGTAACAGAGATATTATTGCATAAGCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR TCA 72 bp | CTCTCTAGATGTATCTATACAACAGAGAAAGAGATATaGCTCCTAGGTGGTTTTCAATCTAATCAAACTGAC | + |
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Preference number: 3 (lower is better) Translates to: LSRCIYTTEKEI*LLGGFQSNQTD Trigger: GTCAGTTTGATTAGATTGAAAACCACCTAGGAGTCATATCTCTTTCTCTGTTGTATAGATACATCTAGAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CCA 90 bp | CAGAAAATCTTGAAGAACCAGTTAGGCCTCATGGCAGGTGGCAGGCAGTGTCACAGATGCAGACTCGCCTaGACATTTTCACACTGTAAC | + |
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Preference number: 4 (lower is better) Translates to: QKILKNQLGLMAGGRQCHRCRLA*TFSHCN Trigger: GTTACAGTGTGAAAATGTCCAGGCGAGTCTGCATCT...GTGACACTGCCTGCCACCTGCCATGAGGCCTAACTGGTTCTTCAAGATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CCA 90 bp | CAGAAAATCTTGAAGAACCAGTTAGGCCTCATGGCAGGTGGCAGGCAGTGTCACAGATATAAGGACACATaGCCAAGCAGATGCAGACTC | + |
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Preference number: 4 (lower is better) Translates to: QKILKNQLGLMAGGRQCHRYKDT*PSRCRL Trigger: GAGTCTGCATCTGCTTGGCCATGTGTCCTTATATCT...GTGACACTGCCTGCCACCTGCCATGAGGCCTAACTGGTTCTTCAAGATTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR TCA 90 bp | CAGAAAATCTTGAAGAACCAGTTAGGCCTCATGGCAGGTGGCAGGCAGTGTCACTTCCTTCAGCTGATTTaGTCCTTAAGATGGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: QKILKNQLGLMAGGRQCHFLQLI*SLRWQQ Trigger: TTGCTGCCATCTTAAGGATCAAATCAGCTGAAGGAA...GTGACACTGCCTGCCACCTGCCATGAGGCCTAACTGGTTCTTCAAGATTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR GCA 90 bp | AGCCATTTGTATGCTGCAACCCCTTTCCTAGACATGCTTTCTTGCCTAAGCTTAACCACAAGTAGAGAATaGCTTGTGCCTTCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SHLYAATPFLDMLSCLSLTTSRE*LVPSFS Trigger: GCTGAAGGAAGGCACAAGGCATTCTCTACTTGTGGT...TAAGCTTAGGCAAGAAAGCATGTCTAGGAAAGGGGTTGCAGCATACAAATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGAAACAATCACCCATGGAGTGACAGCCATCATGTaGGAACCACAAGTAGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TKVWTLCPFLELETITHGVTAIM*EPQVEN Trigger: ATTCTCTACTTGTGGTTCCCACATGATGGCTGTCAC...TCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 72 bp | AAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATaGGAAACAATCACCCATGGAAGGAGTTACAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: KTKVWTLCPFLE*ETITHGRSYRD Trigger: GTCTCTGTAACTCCTTCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 72 bp | AAACTGAAGAAGAACGAAGACCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGAAACAATCACCCATGG | + |
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Preference number: 4 (lower is better) Translates to: KLKKNEDQSVDT*PLLRIGNNHPW Trigger: CCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CCA 90 bp | GTGCATATGTGTGTGATATTATTTGAAAAGGACATGAGGAATATGTGGGGAAATACAAAGAGGAGAGGCTaGAGTTCTGGGCGATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VHMCVILFEKDMRNMWGNTKRRG*SSGRSV Trigger: CACAGATCGCCCAGAACTCCAGCCTCTCCTCTTTGT...ATTTCCCCACATATTCCTCATGTCCTTTTCAAATAATATCACACACATATGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR TCA 90 bp | AGCCATTTGTATGCTGCAACCCCTTTCCTAGACATGCTTTCTTGCCTAAGCTTATGTTGCCTAAGACGGTaGCAATATAAACAAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SHLYAATPFLDMLSCLSLCCLRR*QYKQTE Trigger: TTCTGTTTGTTTATATTGTCACCGTCTTAGGCAACA...TAAGCTTAGGCAAGAAAGCATGTCTAGGAAAGGGGTTGCAGCATACAAATGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR GCA 90 bp | TTAGCAGAAACTTGCCAAACTCACAGTTTGAGGTTAACTCCAGAAAATCTTGAAGTCCTGATGACGTTTTaGCTGAGTATTGTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: LAETCQTHSLRLTPENLEVLMTF*LSIVFK Trigger: CTTGAAGACAATACTCAGGCAAAACGTCATCAGGAC...TTCAAGATTTTCTGGAGTTAACCTCAAACTGTGAGTTTGGCAAGTTTCTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CCA 90 bp | TCCCTCATGTTAACCTCTCTAGATGTATCTATACAACAGAGAAAGAGATATGACAAGGTCAAGATGGCTTaGAATAGTCCATCTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SLMLTSLDVSIQQRKRYDKVKMA*NSPSEK Trigger: CTTCTCAGATGGACTATTCCAAGCCATCTTGACCTT...GTCATATCTCTTTCTCTGTTGTATAGATACATCTAGAGAGGTTAACATGAGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 72 bp | AACAGCCTTTTAGCAGAAACTTGCCAAACTCACAGTTaGAGGTTAACTCCAGAAAATCTTGAAGAACCAGTT | + |
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Preference number: 4 (lower is better) Translates to: NSLLAETCQTHS*RLTPENLEEPV Trigger: AACTGGTTCTTCAAGATTTTCTGGAGTTAACCTCAAACTGTGAGTTTGGCAAGTTTCTGCTAAAAGGCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTTATGCAATAATATCTCTGTTACTAGTTTGCATCAACAGTTGTGCTCATTTTCTGATAAGAAATTaGTCAACATCTGTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TAYAIISLLLVCINSCAHFLIRN*STSVGW Trigger: CCACCCCACAGATGTTGACCAATTTCTTATCAGAAA...ATGAGCACAACTGTTGATGCAAACTAGTAACAGAGATATTATTGCATAAGCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| 3UTR CAA 72 bp | TTTGTATGCTGCAACCCCTTTCCTAGACATGCTTTCTaGCCTAAGCTTAATCTCTATGTTAATTCTTATATT | + |
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Preference number: 4 (lower is better) Translates to: FVCCNPFPRHAF*PKLNLYVNSYI Trigger: AATATAAGAATTAACATAGAGATTAAGCTTAGGCAAGAAAGCATGTCTAGGAAAGGGGTTGCAGCATACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CAA 90 bp | CAGAAAATCTTGAAGAACCAGTTAGGCCTCATGGCAGGTGGCAGGCAGTGTCACGCCACCATGCCCATGTaGCCTAAGACGGTGACAATA | + |
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Preference number: 5 (lower is better) Translates to: QKILKNQLGLMAGGRQCHATMPM*PKTVTI Trigger: TATTGTCACCGTCTTAGGCAACATGGGCATGGTGGC...GTGACACTGCCTGCCACCTGCCATGAGGCCTAACTGGTTCTTCAAGATTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS GCA 90 bp | GTCCATCTGAGAAGCCATAGATATAAGGACACATGGCCAAGCAGATaGAGACTCGCCTGGACATTTTCACACTGTAACGCAGAGGGTTGC | + |
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Preference number: 5 (lower is better) Translates to: VHLRSHRYKDTWPSR*RLAWTFSHCNAEGC Trigger: GCAACCCTCTGCGTTACAGTGTGAAAATGTCCAGGCGAGTCTGCATCTGCTTGGCCATGTGTCCTTATATCTATGGCTTCTCAGATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGAAACAATCACCCATGGAGATTCTTCAACAGTCTaGTCAGTAGGTGGTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: TKVWTLCPFLELETITHGDSSTV*SVGGLT Trigger: TGTAAGACCACCTACTGACAAGACTGTTGAAGAATC...TCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATTGGAAACAATCACCCATGGATATTGTTGCAGTTTGTaGGAAGGTGGACGCATCAAT | + |
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Preference number: 5 (lower is better) Translates to: TKVWTLCPFLELETITHGYCCSL*EGGRIN Trigger: ATTGATGCGTCCACCTTCCAACAAACTGCAACAATA...TCCATGGGTGATTGTTTCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CAA 90 bp | CTAGGTTATTCTCACTCTAGTCAAATGAACCATATACACTGGCTACCACTATTCCTTCCTTCAGCTGATTaGATCCTTAAGATGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LGYSHSSQMNHIHWLPLFLPSAD*ILKMAA Trigger: TGCTGCCATCTTAAGGATCAAATCAGCTGAAGGAAG...GAATAGTGGTAGCCAGTGTATATGGTTCATTTGACTAGAGTGAGAATAACCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS-3UTR CAA 90 bp | TCCCTCATGTTAACCTCTCTAGATGTATCTATACAACAGAGAAAGAGATATGACCAAGTAGAGAATGCCTaGTGCCTTCCTTCAGCTGAT | + |
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Preference number: 5 (lower is better) Translates to: SLMLTSLDVSIQQRKRYDQVENA*CLPSAD Trigger: ATCAGCTGAAGGAAGGCACAAGGCATTCTCTACTTG...GTCATATCTCTTTCTCTGTTGTATAGATACATCTAGAGAGGTTAACATGAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS CCA 72 bp | TATAAGGACACATGGCCAAGCAGATGCAGACTCGCCTaGACATTTTCACACTGTAACGCAGAGGGTTGCATA | + |
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Preference number: 6 (lower is better) Translates to: YKDTWPSRCRLA*TFSHCNAEGCI Trigger: TATGCAACCCTCTGCGTTACAGTGTGAAAATGTCCAGGCGAGTCTGCATCTGCTTGGCCATGTGTCCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS GCA 72 bp | GAAGGTGGACGCATCAATGCTGTCCTGATGACGTTTTaGCTGAGTATTGTCTTCAAGGCCTGCTTTACATCT | + |
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Preference number: 6 (lower is better) Translates to: EGGRINAVLMTF*LSIVFKACFTS Trigger: AGATGTAAAGCAGGCCTTGAAGACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS GCA 72 bp | TTATTGTTGCAGTTTGTTGGAAGGTGGACGCATCAATaGTGTCCTGATGACGTTTTGCCTGAGTATTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLLQFVGRWTHQ*CPDDVLPEYCL Trigger: AAGACAATACTCAGGCAAAACGTCATCAGGACAGCATTGATGCGTCCACCTTCCAACAAACTGCAACAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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| CDS CAA 72 bp | CTGATAAGAAATTGGTCAACATCTGTGGGGTGGCTGTaGAGGTATAACACAGATCCACAAATGCCAAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: LIRNWSTSVGWL*RYNTDPQMPSY Trigger: GTAACTTGGCATTTGTGGATCTGTGTTATACCTCAACAGCCACCCCACAGATGTTGACCAATTTCTTATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080698.3 |
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