Pregenerated sensors for OLFR1023 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050128Ensembl transcript IDs: ENSMUST00000213441.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCTCTTCAGCTCCTTCAGCCTTCCACTAAGTCCTCCATTATTGTaGTCGCCATGCTCAGTCCAATGGTCGGCTTCGAGATTCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: NLFSSFSLPLSPPLL*SPCSVQWSASRFSL Trigger: GAGGGAGAATCTCGAAGCCGACCATTGGACTGAGCATGGCGACCACAATAATGGAGGACTTAGTGGAAGGCTGAAGGAGCTGAAGAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 90 bp | TGGTCGCCATGCTCAGTCCAATGGTCGGCTTCGAGATTCTCCCTCTaGATTTGTCAGGTTCTGGCAGAGCCTTTAAGGAGACAGCTATAT | + |
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Preference number: 1 (lower is better) Translates to: WSPCSVQWSASRFSL*ICQVLAEPLRRQLY Trigger: ATATAGCTGTCTCCTTAAAGGCTCTGCCAGAACCTGACAAATTCAGAGGGAGAATCTCGAAGCCGACCATTGGACTGAGCATGGCGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 90 bp | ACCCTCAGGACCTGCACAAGTCTAAGCATGATGGGGTCTCAGCACTaGGAGGGGAACAAGATACAATTCTATATGGATAACCCAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: TLRTCTSLSMMGSQH*EGNKIQFYMDNPEA Trigger: AGCTTCTGGGTTATCCATATAGAATTGTATCTTGTTCCCCTCTCAGTGCTGAGACCCCATCATGCTTAGACTTGTGCAGGTCCTGAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 90 bp | CATGGTTTGTGCTTTAATTTCTGGGAACTCTGGGGGTCTAGTTGGTaGTATTGTTGTTCTTCCTATGGGTTTGCAAACCTCTTCAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: HGLCFNFWELWGSSW*YCCSSYGFANLFSS Trigger: GGAGCTGAAGAGGTTTGCAAACCCATAGGAAGAACAACAATATCACCAACTAGACCCCCAGAGTTCCCAGAAATTAAAGCACAAACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CCA 90 bp | CCTGAGAACACAGAGACTAATAAAGACCAAATTCAGATCAATGGGTaGATCCTACCTCATCCTAACCTCCAGGATGAGGATTGTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: PENTETNKDQIQING*ILPHPNLQDEDCAV Trigger: AACAGCACAATCCTCATCCTGGAGGTTAGGATGAGGTAGGATCCACCCATTGATCTGAATTTGGTCTTTATTAGTCTCTGTGTTCTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CCA 90 bp | AAACTCTCTCAAAGGAAAAACTTGTTTTCTCCAATGGAGTGTCACTaGACATATAAACTACCCTTAGCAGCAGGCTTTATGGTCCAGATG | + |
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Preference number: 1 (lower is better) Translates to: KLSQRKNLFSPMECH*TYKLPLAAGFMVQM Trigger: CATCTGGACCATAAAGCCTGCTGCTAAGGGTAGTTTATATGTCCAGTGACACTCCATTGGAGAAAACAAGTTTTTCCTTTGAGAGAGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 90 bp | TGCACCACATTTCAAACAAGGTATCCTTGGGTATTCAGAAGTCAATaGATAGACCATATCTGTCCAAGTTATCAAATTCTAACTGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: CTTFQTRYPWVFRSQ*IDHICPSYQILTES Trigger: ACTTTCAGTTAGAATTTGATAACTTGGACAGATATGGTCTATTCATTGACTTCTGAATACCCAAGGATACCTTGTTTGAAATGTGGTGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTAGAACTCACAGAGACTaGGGCAGCACCCTCAGGACC | + |
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Preference number: 2 (lower is better) Translates to: LGVFSSPARPILSPTEALRTHRD*GSTLRT Trigger: GGTCCTGAGGGTGCTGCCTCAGTCTCTGTGAGTTCT...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CAA 90 bp | GCAAACCTCTTCAGCTCCTTCAGCCTTCCACTAAGTCCTCCATTATaGTGGTCGCCATGCTCAGTCCAATGGTCGGCTTCGAGATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ANLFSSFSLPLSPPL*WSPCSVQWSASRFS Trigger: GGAGAATCTCGAAGCCGACCATTGGACTGAGCATGGCGACCACAATAATGGAGGACTTAGTGGAAGGCTGAAGGAGCTGAAGAGGTTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTAAATTGGGGTGGGTTTaGGTGGGTGGGGAAATGGGG | + |
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Preference number: 2 (lower is better) Translates to: LGVFSSPARPILSPTEALKLGWV*VGGEMG Trigger: CCCCATTTCCCCACCCACCCAAACCCACCCCAATTT...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCACCCCTTTAGCTCCTTaGGTGTTTTCTCTAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: ALAFPCTGECDISKTKGLTPLAP*VFSLAL Trigger: CAGGGCTAGAGAAAACACCCAAGGAGCTAAAGGGGT...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR TCA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCTTTTGCAGGGTTTTGTaGCTCACAGTGCTTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: ALAFPCTGECDISKTKGLFCRVL*LTVLCL Trigger: CAGACAAAGCACTGTGAGTCACAAAACCCTGCAAAA...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGATGAATAAATTGGGGTaGGTTTGGGTGGGTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SWPWHSPVLGNVILARPKMNKLG*VWVGGE Trigger: TTCCCCACCCACCCAAACCCACCCCAATTTATTCAT...CTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCCCAAATTCAGATCAATaGGTGGATCCTACCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: ALAFPCTGECDISKTKGLPNSDQ*VDPTSS Trigger: GGATGAGGTAGGATCCACCCATTGATCTGAATTTGG...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTAAAACGACCAGGCAGTaGTGGCACATGCCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: LGVFSSPARPILSPTEALKTTRQ*WHMPLI Trigger: GATTAAAGGCATGTGCCATCACTGCCTGGTCGTTTT...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCTTCTTCCTATGGGTTTaGAAACCTCTTCAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: ALAFPCTGECDISKTKGLFFLWV*KPLQLL Trigger: AAGGAGCTGAAGAGGTTTGCAAACCCATAGGAAGAA...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CCA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCTTTCAAAGCTGGAAATaGAAGCAACACTGGAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: ALAFPCTGECDISKTKGLFQSWK*KQHWKV Trigger: AACTTTCCAGTGTTGCTTCCATTTCCAGCTTTGAAA...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGATGATATTCACATTCTaGTTCCTGAGAACACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SWPWHSPVLGNVILARPKMIFTF*FLRTQR Trigger: TCTCTGTGTTCTCAGGAATCAGAATGTGAATATCAT...CTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTTTCCCTATTCTTCTTTaGTTGTACTCCATGGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LGVFSSPARPILSPTEALFPILL*LYSMVC Trigger: ACAAACCATGGAGTACAAGCAAAGAAGAATAGGGAA...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTCATGATGAATCCAGTTaGATTTTTGCAGGGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LGVFSSPARPILSPTEALHDESS*IFAGFC Trigger: ACAAAACCCTGCAAAAATGCAACTGGATTCATCATG...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGACCCAAGTCTCCAAAATGGTCCAACTTTACAAAAATCTACAGATAATTATGGGGTCTCAGCACTaGGAGGGGAACAAGATACAA | + |
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Preference number: 2 (lower is better) Translates to: SVTQVSKMVQLYKNLQIIMGSQH*EGNKIQ Trigger: TTGTATCTTGTTCCCCTCTCAGTGCTGAGACCCCAT...AATTATCTGTAGATTTTTGTAAAGTTGGACCATTTTGGAGACTTGGGTCACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGACCCAAGTCTCCAAAATGGTCCAACTTTACAAAAATCTACAGATAATTTCGAGATTCTCCCTCTaGATTTGTCAGGTTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: SVTQVSKMVQLYKNLQIISRFSL*ICQVLA Trigger: TGCCAGAACCTGACAAATTCAGAGGGAGAATCTCGA...AATTATCTGTAGATTTTTGTAAAGTTGGACCATTTTGGAGACTTGGGTCACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CAA 90 bp | ACCCAGAAGCTTTCTTCAGCTGATAAACTCTCTCAAAGGAAAAACTaGTTTTCTCCAATGGAGTGTCACTGGACATATAAACTACCCTTA | + |
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Preference number: 2 (lower is better) Translates to: TQKLSSADKLSQRKN*FSPMECHWTYKLPL Trigger: TAAGGGTAGTTTATATGTCCAGTGACACTCCATTGGAGAAAACAAGTTTTTCCTTTGAGAGAGTTTATCAGCTGAAGAAAGCTTCTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGATTCTCCCTCTGAATTaGTCAGGTTCTGGCAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: SWPWHSPVLGNVILARPKILPLN*SGSGRA Trigger: GGCTCTGCCAGAACCTGACAAATTCAGAGGGAGAAT...CTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCAGAATATTTCCAAGCTaGGTGAAGACCCTCAGCATC | + |
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Preference number: 3 (lower is better) Translates to: ALAFPCTGECDISKTKGLRIFPS*VKTLSI Trigger: GATGCTGAGGGTCTTCACCAAGCTTGGAAATATTCT...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 72 bp | TGCTCAGTCCAATGGTCGGCTTCGAGATTCTCCCTCTaGATTTGTCAGGTTCTGGCAGAGCCTTTAAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CSVQWSASRFSL*ICQVLAEPLRR Trigger: TCTCCTTAAAGGCTCTGCCAGAACCTGACAAATTCAGAGGGAGAATCTCGAAGCCGACCATTGGACTGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGCCTATTCTTCTTTGCTaGTACTCCATGGTTTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SWPWHSPVLGNVILARPKPILLC*YSMVCA Trigger: AGCACAAACCATGGAGTACAAGCAAAGAAGAATAGG...CTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTAATCCAGTTGCATTTTaGCAGGGTTTTGTGACTCAC | + |
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Preference number: 3 (lower is better) Translates to: LGVFSSPARPILSPTEALNPVAF*QGFVTH Trigger: GTGAGTCACAAAACCCTGCAAAAATGCAACTGGATT...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 72 bp | ACTGGCTCAGGGAACCCAATGGAAAAGGAGGTGGAATaGAAGCACCAATTGGAATGGAAGACACTGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: TGSGNPMEKEVE*KHQLEWKTLRK Trigger: TTTCCTCAGTGTCTTCCATTCCAATTGGTGCTTTCATTCCACCTCCTTTTCCATTGGGTTCCCTGAGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | TTGGGTGTTTTCTCTAGCCCTGCAAGGCCAATTCTTTCCCCCACAGAAGCTCTTACTTTTCTGATAGTGTaGCATCTCAAAGAGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LGVFSSPARPILSPTEALTFLIV*HLKEKS Trigger: AGACTTCTCTTTGAGATGCAACACTATCAGAAAAGT...AAGAGCTTCTGTGGGGGAAAGAATTGGCCTTGCAGGGCTAGAGAAAACACCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 72 bp | ACCTGCACAAGTCTAAGCATGATGGGGTCTCAGCACTaGGAGGGGAACAAGATACAATTCTATATGGATAAC | + |
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Preference number: 3 (lower is better) Translates to: TCTSLSMMGSQH*EGNKIQFYMDN Trigger: GTTATCCATATAGAATTGTATCTTGTTCCCCTCTCAGTGCTGAGACCCCATCATGCTTAGACTTGTGCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 72 bp | AGGTGGAATGAAAGCACCAATTGGAATGGAAGACACTaGGGAAACAAGGTCTTCAAGACACAAGAGGACCAA | + |
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Preference number: 3 (lower is better) Translates to: RWNESTNWNGRH*GNKVFKTQEDQ Trigger: TTGGTCCTCTTGTGTCTTGAAGACCTTGTTTCCTCAGTGTCTTCCATTCCAATTGGTGCTTTCATTCCACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | GCTTTATGGTCCAGATGGCCAACACATGATGAATCCAGTTGCATTTTTGCAGGGTTTCCCTATTCTTCTTaGCTTGTACTCCATGGTTTG | + |
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Preference number: 3 (lower is better) Translates to: ALWSRWPTHDESSCIFAGFPYSS*LVLHGL Trigger: CAAACCATGGAGTACAAGCAAAGAAGAATAGGGAAA...CCCTGCAAAAATGCAACTGGATTCATCATGTGTTGGCCATCTGGACCATAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR TCA 72 bp | TGCTTTAATTTCTGGGAACTCTGGGGGTCTAGTTGGTaGTATTGTTGTTCTTCCTATGGGTTTGCAAACCTC | + |
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Preference number: 3 (lower is better) Translates to: CFNFWELWGSSW*YCCSSYGFANL Trigger: GAGGTTTGCAAACCCATAGGAAGAACAACAATATCACCAACTAGACCCCCAGAGTTCCCAGAAATTAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CCA 72 bp | CTCAGCACTGAGAGGGGAACAAGATACAATTCTATATaGATAACCCAGAAGCTTTCTTCAGCTGATAAACTC | + |
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Preference number: 3 (lower is better) Translates to: LSTERGTRYNSI*ITQKLSSADKL Trigger: GAGTTTATCAGCTGAAGAAAGCTTCTGGGTTATCCATATAGAATTGTATCTTGTTCCCCTCTCAGTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGACCCAAGTCTCCAAAATGGTCCAACTTTACAAAAATCTACAGATAATTTCTCAAAGGAAAAACTaGTTTTCTCCAATGGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SVTQVSKMVQLYKNLQIISQRKN*FSPMEC Trigger: ACACTCCATTGGAGAAAACAAGTTTTTCCTTTGAGA...AATTATCTGTAGATTTTTGTAAAGTTGGACCATTTTGGAGACTTGGGTCACTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR CCA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCGATTCTCCCCAGCACTaGGCTGTCTGTGAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALAFPCTGECDISKTKGLDSPQH*AVCESH Trigger: GTGGGACTCACAGACAGCCCAGTGCTGGGGAGAATC...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR TCA 90 bp | GGGTTTGCAAACCTCTTCAGCTCCTTCAGCCTTCCACTAAGTCCTCCATTATTGAATGGTCTTCTGGTCTaGGATGAAACCATGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GFANLFSSFSLPLSPPLLNGLLV*DETMQH Trigger: ATGCTGCATGGTTTCATCTCAGACCAGAAGACCATT...CAATAATGGAGGACTTAGTGGAAGGCTGAAGGAGCTGAAGAGGTTTGCAAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CAA 72 bp | CCAGATGGCCAACACATGATGAATCCAGTTGCATTTTaGCAGGGTTTTGTGACTCACAGTGCTTTGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PDGQHMMNPVAF*QGFVTHSALSG Trigger: CCCAGACAAAGCACTGTGAGTCACAAAACCCTGCAAAAATGCAACTGGATTCATCATGTGTTGGCCATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR GCA 90 bp | TCCTGGCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGCATGAACAAGTTTCCTaGCAGTGTGATAACAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SWPWHSPVLGNVILARPKHEQVS*QCDNKN Trigger: ATTTTTGTTATCACACTGGCAGGAAACTTGTTCATG...CTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGCCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR TCA 90 bp | TCTAAGCATGATGGGGTCTCAGCACTGAGAGGGGAACAAGATACAATTCTATATTCTTCTGGTCTGAGATaGAACCATGCAGCATGTTTG | + |
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Preference number: 4 (lower is better) Translates to: SKHDGVSALRGEQDTILYSSGLR*NHAACL Trigger: CAAACATGCTGCATGGTTTCATCTCAGACCAGAAGA...ATATAGAATTGTATCTTGTTCCCCTCTCAGTGCTGAGACCCCATCATGCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR TCA 90 bp | TCAGTGACCCAAGTCTCCAAAATGGTCCAACTTTACAAAAATCTACAGATAATTGATAGCAAGGGAACTTaGGAGAGTAAAGCCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SVTQVSKMVQLYKNLQIIDSKGT*ESKASY Trigger: GTAGCTGGCTTTACTCTCTCAAGTTCCCTTGCTATC...AATTATCTGTAGATTTTTGTAAAGTTGGACCATTTTGGAGACTTGGGTCACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CAA 72 bp | TGTAATGACCAAAATCTCCTCACTTTTCTGATAGTGTaGCATCTCAAAGAGAAGTCTGACAGAACTTTAGGC | + |
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Preference number: 4 (lower is better) Translates to: CNDQNLLTFLIV*HLKEKSDRTLG Trigger: GCCTAAAGTTCTGTCAGACTTCTCTTTGAGATGCAACACTATCAGAAAAGTGAGGAGATTTTGGTCATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR TCA 90 bp | TCAGTGACCCAAGTCTCCAAAATGGTCCAACTTTACAAAAATCTACAGATAATTTTCCATAAAATATGGTaGCTGTTGTCATGTGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SVTQVSKMVQLYKNLQIIFHKIW*LLSCGN Trigger: GTTCCCACATGACAACAGTCACCATATTTTATGGAA...AATTATCTGTAGATTTTTGTAAAGTTGGACCATTTTGGAGACTTGGGTCACTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| 3UTR CAA 72 bp | TATTCACTTTTGCACCACATTTCAAACAAGGTATCCTaGGGTATTCAGAAGTCAATGAATAGACCATATCTG | + |
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Preference number: 4 (lower is better) Translates to: YSLLHHISNKVS*GIQKSMNRPYL Trigger: CAGATATGGTCTATTCATTGACTTCTGAATACCCAAGGATACCTTGTTTGAAATGTGGTGCAAAAGTGAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR CAA 90 bp | GCCCTGGCATTCCCCTGTACTGGGGAATGTGATATTAGCAAGACCAAAGGCCTCAACGGTCTAGTGCCATaGAAGCAAGGAGATAAAACT | + |
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Preference number: 5 (lower is better) Translates to: ALAFPCTGECDISKTKGLNGLVP*KQGDKT Trigger: AGTTTTATCTCCTTGCTTCAATGGCACTAGACCGTT...GAGGCCTTTGGTCTTGCTAATATCACATTCCCCAGTACAGGGGAATGCCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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| CDS-3UTR CAA 90 bp | GCTTTATGGTCCAGATGGCCAACACATGATGAATCCAGTTGCATTTTTGCAGGGACCTGTTTCATGGCATaGATGACATCTTTGTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: ALWSRWPTHDESSCIFAGTCFMA*MTSLFL Trigger: AAGGAACAAAGATGTCATCAATGCCATGAAACAGGT...CCCTGCAAAAATGCAACTGGATTCATCATGTGTTGGCCATCTGGACCATAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213441.3 |
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