Pregenerated sensors for OLFR1016 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075209Ensembl transcript IDs: ENSMUST00000099915.2, ENSMUST00000216425.3, ENSMUST00000217410.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | AAAGCTCATGAGGCCTTAACTCTACACAAAGAACAATaGGCAACTGAGAAGTGGGGTGAGCAAAAGAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: KAHEALTLHKEQ*ATEKWGEQKKS Trigger: TGACTTCTTTTGCTCACCCCACTTCTCAGTTGCCCATTGTTCTTTGTGTAGAGTTAAGGCCTCATGAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| 3UTR TCA 72 bp | TGTGCTTATCTTTCAATTTTCTTAGCTTGTGGTAGATaGTCCTGGAGCCAATACTACCTTTCCATGAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: CAYLSIFLACGR*SWSQYYLSMKE Trigger: TTCCTTCATGGAAAGGTAGTATTGGCTCCAGGATCATCTACCACAAGCTAAGAAAATTGAAAGATAAGCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| 3UTR TCA 72 bp | CTAATCAACCAGATTTTCTGCTACAATAGTGAGCTGTaGCTCATCATAGCTAGACAATCAATTGTCGATTTG | + |
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Preference number: 3 (lower is better) Translates to: LINQIFCYNSEL*LIIARQSIVDL Trigger: CAAATCGACAATTGATTGTCTAGCTATGATGAGTCACAGCTCACTATTGTAGCAGAAAATCTGGTTGATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| 3UTR TCA 72 bp | ACACCAATTATTTATACAATATCAAATGGTCAACTCTaGAAACACACACACACACACACACAGATAGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: TPIIYTISNGQL*KHTHTHTQIGR Trigger: CCTACCTATCTGTGTGTGTGTGTGTGTGTGTTTTCAGAGTTGACCATTTGATATTGTATAAATAATTGGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| 3UTR CCA 72 bp | GTATACGAGCACACCAATTATTTATACAATATCAAATaGTCAACTCTGAAAACACACACACACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: VYEHTNYLYNIK*STLKTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTTTTCAGAGTTGACCATTTGATATTGTATAAATAATTGGTGTGCTCGTATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| CDS-3UTR CCA 90 bp | ACATACATTAACCGACTTACTATAGTAGATCTCCTGAAGTGTCATGTGGTGTGGTGGGTATCATTACATTaGAGGTCAGTAGGAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: TYINRLTIVDLLKCHVVWWVSLH*RSVGST Trigger: TGTACTTCCTACTGACCTCCAATGTAATGATACCCA...CCACACCACATGACACTTCAGGAGATCTACTATAGTAAGTCGGTTAATGTATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| CDS-3UTR CCA 90 bp | ACATACATTAACCGACTTACTATAGTAGATCTCCTGAAGTGTCATGTGGTGTGGCTAGGATTAGAGCAATaGGTATCATTACATTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TYINRLTIVDLLKCHVVWLGLEQ*VSLHWR Trigger: CCTCCAATGTAATGATACCCATTGCTCTAATCCTAG...CCACACCACATGACACTTCAGGAGATCTACTATAGTAAGTCGGTTAATGTATGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| CDS-3UTR CCA 90 bp | ACATACATTAACCGACTTACTATAGTAGATCTCCTGAAGTGTCATGTGGTGTGGAATCTAAAGAATATCTaGTACGGGGACGAGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TYINRLTIVDLLKCHVVWNLKNI*YGDESR Trigger: TCTACTCTCGTCCCCGTACCAGATATTCTTTAGATT...CCACACCACATGACACTTCAGGAGATCTACTATAGTAAGTCGGTTAATGTATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| CDS-3UTR CAA 90 bp | ACATACATTAACCGACTTACTATAGTAGATCTCCTGAAGTGTCATGTGGTGTGGGTCTGGTATCCTTCCTaGCCACCACAAGCCAGATTC | + |
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Preference number: 5 (lower is better) Translates to: TYINRLTIVDLLKCHVVWVWYPS*PPQARF Trigger: GAATCTGGCTTGTGGTGGCAAGGAAGGATACCAGAC...CCACACCACATGACACTTCAGGAGATCTACTATAGTAAGTCGGTTAATGTATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| CDS-3UTR CAA 90 bp | ACATACATTAACCGACTTACTATAGTAGATCTCCTGAAGTGTCATGTGGTGTGGTGGAGCCTGGAGTCATaGCAGATCAACACAATAAGA | + |
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Preference number: 5 (lower is better) Translates to: TYINRLTIVDLLKCHVVWWSLES*QINTIR Trigger: TCTTATTGTGTTGATCTGCAATGACTCCAGGCTCCA...CCACACCACATGACACTTCAGGAGATCTACTATAGTAAGTCGGTTAATGTATGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000216425.3 ENSMUST00000217410.3 |
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| CDS CAA 72 bp | TGTGTACATAATGAGAAACATCACAAACAGGACCAATaGTGTGGTAGGGTCAGAGGTGAATCCCAAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: CVHNEKHHKQDQ*CGRVRGESQED Trigger: ATCCTCTTGGGATTCACCTCTGACCCTACCACACAATTGGTCCTGTTTGTGATGTTTCTCATTATGTACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099915.2 ENSMUST00000216425.3 ENSMUST00000217410.3 |
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