Pregenerated sensors for OLFR1013 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053287Ensembl transcript IDs: ENSMUST00000216397.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATAGCTGGTCAGGAAGGAAGAGGGTGAAACTTCCATGCAGAGGATaGAGGGAAATGAAAGCAGACATGGGAAAATTGGGAGTAGACACC | + |
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Preference number: 1 (lower is better) Translates to: NSWSGRKRVKLPCRG*REMKADMGKLGVDT Trigger: GGTGTCTACTCCCAATTTTCCCATGTCTGCTTTCATTTCCCTCCATCCTCTGCATGGAAGTTTCACCCTCTTCCTTCCTGACCAGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CCA 90 bp | GAGGGAAATGAAAGCAGACATGGGAAAATTGGGAGTAGACACCAATaGGAACAGACATGGACCAAAGCAGAGCAGAGAAGTACAGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: EGNESRHGKIGSRHQ*EQTWTKAEQRSTEL Trigger: TAGCTCTGTACTTCTCTGCTCTGCTTTGGTCCATGTCTGTTCCCATTGGTGTCTACTCCCAATTTTCCCATGTCTGCTTTCATTTCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR TCA 90 bp | AAACTTGAACACTTCAGCCAAGGCATATGCCACTCACATGGTCAGTaGTGTAACAGCATGAAATCCAAATGGAATCAAGGGCAAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: KLEHFSQGICHSHGQ*CNSMKSKWNQGQRV Trigger: GACTCTTTGCCCTTGATTCCATTTGGATTTCATGCTGTTACATCACTGACCATGTGAGTGGCATATGCCTTGGCTGAAGTGTTCAAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CCA 90 bp | ACACTCTCTCGGTCTCACCCTAAGATGGTACAATTCTCTAAGAAGTaGTTTTATGGAAGCTCCTCACATTCTACTAGCTTGAGACATTCT | + |
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Preference number: 1 (lower is better) Translates to: TLSRSHPKMVQFSKK*FYGSSSHSTSLRHS Trigger: AGAATGTCTCAAGCTAGTAGAATGTGAGGAGCTTCCATAAAACCACTTCTTAGAGAATTGTACCATCTTAGGGTGAGACCGAGAGAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR GCA 90 bp | ACTCTGTATTTTCAATTGTTAATTCTGTACAGGCAAAGAACAAAGTaGTGGCAAGATTCTGATATTATCCAGTCTTTTGGCTCATTACTG | + |
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Preference number: 1 (lower is better) Translates to: TLYFQLLILYRQRTK*WQDSDIIQSFGSLL Trigger: CAGTAATGAGCCAAAAGACTGGATAATATCAGAATCTTGCCAGCACTTTGTTCTTTGCCTGTACAGAATTAACAATTGAAAATACAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 90 bp | CTTCCATGCAGAGGATGGAGGGAAATGAAAGCAGACATGGGAAAATaGGGAGTAGACACCAATGGGAACAGACATGGACCAAAGCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LPCRGWREMKADMGK*GVDTNGNRHGPKQS Trigger: GCTCTGCTTTGGTCCATGTCTGTTCCCATTGGTGTCTACTCCCAATTTTCCCATGTCTGCTTTCATTTCCCTCCATCCTCTGCATGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR TCA 90 bp | ATGTGGGAAGTAATGGACAGAGGTGAGTGTTCTTATCCACAGGGCCTCAGACAGGGGGAACCTAAAACTTaGACACTTCAGCCAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: MWEVMDRGECSYPQGLRQGEPKT*TLQPRH Trigger: ATGCCTTGGCTGAAGTGTTCAAGTTTTAGGTTCCCC...CTGTCTGAGGCCCTGTGGATAAGAACACTCACCTCTGTCCATTACTTCCCACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGAGGTGAGTGTTCTTATCCACAGGGCCTCAGACAGAGTCATTGGAAGAAGCATGAAATCCAAATaGAATCAAGGGCAAAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: WTEVSVLIHRASDRVIGRSMKSK*NQGQRV Trigger: GACTCTTTGCCCTTGATTCCATTTGGATTTCATGCT...TCTTCCAATGACTCTGTCTGAGGCCCTGTGGATAAGAACACTCACCTCTGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR TCA 90 bp | GACCAAAGCAGAGCAGAGAAGTACAGAGCTAGCCTTGTGGCAAGTCAAAGTCTAGTAGGGATGAATAAATaGCCAGTTATACATTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DQSRAEKYRASLVASQSLVGMNK*PVIHCL Trigger: CAGGCAATGTATAACTGGTCATTTATTCATCCCTAC...TAGACTTTGACTTGCCACAAGGCTAGCTCTGTACTTCTCTGCTCTGCTTTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTATCCACAGGGCCTCAGACAGAGTCATTGGAAGATCACATTTTTCACTGGTTGTAATAAAAATCTaGTGGCCAATAGCTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VLIHRASDRVIGRSHFSLVVIKI*WPIAGQ Trigger: CTGACCAGCTATTGGCCATCAGATTTTTATTACAAC...CAGTGAAAAATGTGATCTTCCAATGACTCTGTCTGAGGCCCTGTGGATAAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CCA 90 bp | AATTACTCAACCCTATTATATTCTCCAATCACCATGCTCTCTTCGTGTATTAGGGGGAGTAGACACCAATaGGAACAGACATGGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: NYSTLLYSPITMLSSCIRGSRHQ*EQTWTK Trigger: TTTGGTCCATGTCTGTTCCCATTGGTGTCTACTCCC...CCTAATACACGAAGAGAGCATGGTGATTGGAGAATATAATAGGGTTGAGTAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR GCA 90 bp | GTTCTTATCCACAGGGCCTCAGACAGAGTCATTGGAAGATCACATTTTTCACTGTCATCATTCCTCACATaGCTAAAATCCATCCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: VLIHRASDRVIGRSHFSLSSFLT*LKSIQN Trigger: ATTTTGGATGGATTTTAGGCATGTGAGGAATGATGA...CAGTGAAAAATGTGATCTTCCAATGACTCTGTCTGAGGCCCTGTGGATAAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAATCATTCATGTCTTCTTGCTTTCTGGGAACAAGAACAAATTGAAAGGACTCAATGGGAACAGACATaGACCAAAGCAGAGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: QNHSCLLAFWEQEQIERTQWEQT*TKAEQR Trigger: TCTCTGCTCTGCTTTGGTCCATGTCTGTTCCCATTG...AGTCCTTTCAATTTGTTCTTGTTCCCAGAAAGCAAGAAGACATGAATGATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAATCATTCATGTCTTCTTGCTTTCTGGGAACAAGAACAAATTGAAAGGACTCTTCCATGCAGAGGATaGAGGGAAATGAAAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: QNHSCLLAFWEQEQIERTLPCRG*REMKAD Trigger: GTCTGCTTTCATTTCCCTCCATCCTCTGCATGGAAG...AGTCCTTTCAATTTGTTCTTGTTCCCAGAAAGCAAGAAGACATGAATGATTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 90 bp | TCTACTAGCTTGAGACATTCTGATGAAAACATACTCTACACAACATaGAAGGAACATGGTGGAATTTTCCACTACTATAGGGAAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: STSLRHSDENILYTT*KEHGGIFHYYREGR Trigger: TCTGCCTTCCCTATAGTAGTGGAAAATTCCACCATGTTCCTTCAATGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAAGCTAGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR TCA 90 bp | TATGACAACCCTGACAGAGTTATCTGTTCTCTAGCATTCTTTCAAAATCATTCAGAGGATGGAGGGAAATaGAAGCAGACATGGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: YDNPDRVICSLAFFQNHSEDGGK*KQTWEN Trigger: ATTTTCCCATGTCTGCTTTCATTTCCCTCCATCCTC...TGAATGATTTTGAAAGAATGCTAGAGAACAGATAACTCTGTCAGGGTTGTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR TCA 90 bp | TATGACAACCCTGACAGAGTTATCTGTTCTCTAGCATTCTTTCAAAATCATTCACACTCACATGGTCAGTaGTGTAACAGCATGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: YDNPDRVICSLAFFQNHSHSHGQ*CNSMKS Trigger: GGATTTCATGCTGTTACATCACTGACCATGTGAGTG...TGAATGATTTTGAAAGAATGCTAGAGAACAGATAACTCTGTCAGGGTTGTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 90 bp | TTCTCTAAGAAGTGGTTTTATGGAAGCTCCTCACATTCTACTAGCTaGAGACATTCTGATGAAAACATACTCTACACAACATTGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FSKKWFYGSSSHSTS*RHSDENILYTTLKE Trigger: TTCCTTCAATGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAAGCTAGTAGAATGTGAGGAGCTTCCATAAAACCACTTCTTAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR GCA 90 bp | AATTACTCAACCCTATTATATTCTCCAATCACCATGCTCTCTTCGTGTATTAGGAGGCAAAGAACAAAGTaGTGGCAAGATTCTGATATT | + |
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Preference number: 2 (lower is better) Translates to: NYSTLLYSPITMLSSCIRRQRTK*WQDSDI Trigger: AATATCAGAATCTTGCCAGCACTTTGTTCTTTGCCT...CCTAATACACGAAGAGAGCATGGTGATTGGAGAATATAATAGGGTTGAGTAATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CCA 90 bp | TATGACAACCCTGACAGAGTTATCTGTTCTCTAGCATTCTTTCAAAATCATTCATACCCTGAAATCTTGTaGATAAAGCACATGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: YDNPDRVICSLAFFQNHSYPEIL*IKHMDF Trigger: AAAGTCCATGTGCTTTATCCACAAGATTTCAGGGTA...TGAATGATTTTGAAAGAATGCTAGAGAACAGATAACTCTGTCAGGGTTGTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CAA 90 bp | ATGTGGGAAGTAATGGACAGAGGTGAGTGTTCTTATCCACAGGGCCTCAGACAGGCAGACATGGGAAAATaGGGAGTAGACACCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: MWEVMDRGECSYPQGLRQADMGK*GVDTNG Trigger: CCCATTGGTGTCTACTCCCAATTTTCCCATGTCTGC...CTGTCTGAGGCCCTGTGGATAAGAACACTCACCTCTGTCCATTACTTCCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CCA 72 bp | ATATTGACAGCTGAGACTGGCACATGCCTACAATCCTaGCACCTGGAGTGGGAAAATAAGAAGGCAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ILTAETGTCLQS*HLEWENKKAGG Trigger: TCCTCCTGCCTTCTTATTTTCCCACTCCAGGTGCCAGGATTGTAGGCATGTGCCAGTCTCAGCTGTCAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CAA 90 bp | GACCAAAGCAGAGCAGAGAAGTACAGAGCTAGCCTTGTGGCAAGTCAAAGTCTAATGACCAGTTATACATaGCCTGTTCTACCACTACCC | + |
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Preference number: 3 (lower is better) Translates to: DQSRAEKYRASLVASQSLMTSYT*PVLPLP Trigger: GGGTAGTGGTAGAACAGGCAATGTATAACTGGTCAT...TAGACTTTGACTTGCCACAAGGCTAGCTCTGTACTTCTCTGCTCTGCTTTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CCA 72 bp | GAAAGCAGACATGGGAAAATTGGGAGTAGACACCAATaGGAACAGACATGGACCAAAGCAGAGCAGAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: ESRHGKIGSRHQ*EQTWTKAEQRS Trigger: ACTTCTCTGCTCTGCTTTGGTCCATGTCTGTTCCCATTGGTGTCTACTCCCAATTTTCCCATGTCTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR TCA 72 bp | CACTTCAGCCAAGGCATATGCCACTCACATGGTCAGTaGTGTAACAGCATGAAATCCAAATGGAATCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: HFSQGICHSHGQ*CNSMKSKWNQG Trigger: CCCTTGATTCCATTTGGATTTCATGCTGTTACATCACTGACCATGTGAGTGGCATATGCCTTGGCTGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CCA 72 bp | CTGATCGGTTGTAATAAAAATCTGATGGCCAATAGCTaGTCAGGAAGGAAGAGGGTGAAACTTCCATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LIGCNKNLMANS*SGRKRVKLPCR Trigger: TCTGCATGGAAGTTTCACCCTCTTCCTTCCTGACCAGCTATTGGCCATCAGATTTTTATTACAACCGATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR TCA 72 bp | GCATATGCCACTCACATGGTCAGTGATGTAACAGCATaGAATCCAAATGGAATCAAGGGCAAAGAGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: AYATHMVSDVTA*NPNGIKGKESM Trigger: CATTGACTCTTTGCCCTTGATTCCATTTGGATTTCATGCTGTTACATCACTGACCATGTGAGTGGCATATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR TCA 72 bp | GATACAATAGTAAGTAGCAAAGGGGAACCTAAAACTTaGACACTTCAGCCAAGGCATATGCCACTCACATGG | + |
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Preference number: 3 (lower is better) Translates to: DTIVSSKGEPKT*TLQPRHMPLTW Trigger: CCATGTGAGTGGCATATGCCTTGGCTGAAGTGTTCAAGTTTTAGGTTCCCCTTTGCTACTTACTATTGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR GCA 72 bp | TTAAGTAAAAAGATATTGACAGCTGAGACTGGCACATaGCTACAATCCTGGCACCTGGAGTGGGAAAATAAG | + |
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Preference number: 3 (lower is better) Translates to: LSKKILTAETGT*LQSWHLEWENK Trigger: CTTATTTTCCCACTCCAGGTGCCAGGATTGTAGGCATGTGCCAGTCTCAGCTGTCAATATCTTTTTACTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR TCA 72 bp | TCTGTACAGGCAAAGAACAAAGTGCTGGCAAGATTCTaGTATTATCCAGTCTTTTGGCTCATTACTGGATTA | + |
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Preference number: 3 (lower is better) Translates to: SVQAKNKVLARF*YYPVFWLITGL Trigger: TAATCCAGTAATGAGCCAAAAGACTGGATAATATCAGAATCTTGCCAGCACTTTGTTCTTTGCCTGTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR TCA 72 bp | AGTGGTTTTATGGAAGCTCCTCACATTCTACTAGCTTaGGACATTCTGATGAAAACATACTCTACACAACAT | + |
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Preference number: 3 (lower is better) Translates to: SGFMEAPHILLA*DILMKTYSTQH Trigger: ATGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAAGCTAGTAGAATGTGAGGAGCTTCCATAAAACCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CAA 90 bp | TCTACTAGCTTGAGACATTCTGATGAAAACATACTCTACACAACATTGAAGGAATGCTTAGTGAAGCACTaGAGACAGTCTAAGTTTCAT | + |
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Preference number: 3 (lower is better) Translates to: STSLRHSDENILYTTLKECLVKH*RQSKFH Trigger: ATGAAACTTAGACTGTCTCAAGTGCTTCACTAAGCA...TTCCTTCAATGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAAGCTAGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR-3UTR CAA 90 bp | TCTACTAGCTTGAGACATTCTGATGAAAACATACTCTACACAACATTGAAGGAATTACTGATGTACAGTTaGCTCACCATTGGAAACCTA | + |
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Preference number: 3 (lower is better) Translates to: STSLRHSDENILYTTLKELLMYS*LTIGNL Trigger: TAGGTTTCCAATGGTGAGCAAACTGTACATCAGTAA...TTCCTTCAATGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAAGCTAGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| CDS-3UTR TCA 90 bp | TGGACAGAGGTGAGTGTTCTTATCCACAGGGCCTCAGACAGAGTCATTGGAAGAATAGTCCAGTGCAGCTaGGAAGAAGAACTGAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: WTEVSVLIHRASDRVIGRIVQCS*EEELSY Trigger: GTAGCTCAGTTCTTCTTCTCAGCTGCACTGGACTAT...TCTTCCAATGACTCTGTCTGAGGCCCTGTGGATAAGAACACTCACCTCTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| CDS-3UTR GCA 90 bp | ATGTGGGAAGTAATGGACAGAGGTGAGTGTTCTTATCCACAGGGCCTCAGACAGAACCGGCGAAGGAAATaGTCTTGTCTTCTGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: MWEVMDRGECSYPQGLRQNRRRK*SCLLRC Trigger: GCATCTCAGAAGACAAGAGCATTTCCTTCGCCGGTT...CTGTCTGAGGCCCTGTGGATAAGAACACTCACCTCTGTCCATTACTTCCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 72 bp | AGAGGATGGAGGGAAATGAAAGCAGACATGGGAAAATaGGGAGTAGACACCAATGGGAACAGACATGGACCA | + |
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Preference number: 4 (lower is better) Translates to: RGWREMKADMGK*GVDTNGNRHGP Trigger: TGGTCCATGTCTGTTCCCATTGGTGTCTACTCCCAATTTTCCCATGTCTGCTTTCATTTCCCTCCATCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 72 bp | TGGACCAAAGCAGAGCAGAGAAGTACAGAGCTAGCCTaGTGGCAAGTCAAAGTCTATATGGTTAGGTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: WTKAEQRSTELA*WQVKVYMVRLS Trigger: ACTTAACCTAACCATATAGACTTTGACTTGCCACAAGGCTAGCTCTGTACTTCTCTGCTCTGCTTTGGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| CDS-3UTR GCA 90 bp | AATTACTCAACCCTATTATATTCTCCAATCACCATGCTCTCTTCGTGTATTAGGCACAACAAGAAACACTaGAAACAGGACCTTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: NYSTLLYSPITMLSSCIRHNKKH*KQDLLY Trigger: ATACAGAAGGTCCTGTTTGCAGTGTTTCTTGTTGTG...CCTAATACACGAAGAGAGCATGGTGATTGGAGAATATAATAGGGTTGAGTAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| CDS-3UTR CCA 90 bp | AATTACTCAACCCTATTATATTCTCCAATCACCATGCTCTCTTCGTGTATTAGGACAGCTTTAAGGACATaGCTTGTGAATAAAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: NYSTLLYSPITMLSSCIRTALRT*LVNKAV Trigger: CACTGCTTTATTCACAAGCCATGTCCTTAAAGCTGT...CCTAATACACGAAGAGAGCATGGTGATTGGAGAATATAATAGGGTTGAGTAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 72 bp | AAGTGGTTTTATGGAAGCTCCTCACATTCTACTAGCTaGAGACATTCTGATGAAAACATACTCTACACAACA | + |
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Preference number: 4 (lower is better) Translates to: KWFYGSSSHSTS*RHSDENILYTT Trigger: TGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAAGCTAGTAGAATGTGAGGAGCTTCCATAAAACCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| CDS-3UTR TCA 90 bp | CAAAATCATTCATGTCTTCTTGCTTTCTGGGAACAAGAACAAATTGAAAGGACTAAGAATAACACAGACTaGAAGCTCTTCTTCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QNHSCLLAFWEQEQIERTKNNTD*KLFFLP Trigger: TGGCAAGAAGAAGAGCTTTCAGTCTGTGTTATTCTT...AGTCCTTTCAATTTGTTCTTGTTCCCAGAAAGCAAGAAGACATGAATGATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 72 bp | TTGAGACATTCTGATGAAAACATACTCTACACAACATaGAAGGAACATGGTGGAATTTTCCACTACTATAGG | + |
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Preference number: 4 (lower is better) Translates to: LRHSDENILYTT*KEHGGIFHYYR Trigger: CCTATAGTAGTGGAAAATTCCACCATGTTCCTTCAATGTTGTGTAGAGTATGTTTTCATCAGAATGTCTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 72 bp | ATCATGTTCTGTGAAGATAAGACTCTGTATTTTCAATaGTTAATTCTGTACAGGCAAAGAACAAAGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IMFCEDKTLYFQ*LILYRQRTKCW Trigger: CCAGCACTTTGTTCTTTGCCTGTACAGAATTAACAATTGAAAATACAGAGTCTTATCTTCACAGAACATGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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| 3UTR CAA 72 bp | ATTCCTCTCATGTATTCGACTGGTTTATACATAAAATaGCAAACTATGATAGGGGGCAATGACTTTGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: IPLMYSTGLYIK*QTMIGGNDFEN Trigger: ATTCTCAAAGTCATTGCCCCCTATCATAGTTTGCAATTTTATGTATAAACCAGTCGAATACATGAGAGGAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216397.3 |
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