Pregenerated sensors for OLFR1009 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043226Ensembl transcript IDs: ENSMUST00000055517.3, ENSMUST00000216443.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTTGGTGCTTGCTTATGGGATGGGTTTCAAGTTGGGCCAGTTATTaGTTGGACTTTCCTGCAGTCTCTGCTCTATCTTTGTTCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: GWCLLMGWVSSWASY*LDFPAVSALSLFLH Trigger: ATGCAAGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAAGCAAGCACCAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 90 bp | GGTGCTTGCTTATGGGATGGGTTTCAAGTTGGGCCAGTTATTGGTTaGACTTTCCTGCAGTCTCTGCTCTATCTTTGTTCTTGCATTTCT | + |
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Preference number: 1 (lower is better) Translates to: GACLWDGFQVGPVIG*TFLQSLLYLCSCIS Trigger: AGAAATGCAAGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAAGCAAGCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 90 bp | TACTATTCAGCTCGCATTGCTCAGAATTCTGTATGGCATGTTAGCTaGCCTACAAAGTTCAAGTTCTCCTGCCTTCACCTGCCAAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: YYSARIAQNSVWHVS*PTKFKFSCLHLPKS Trigger: GCTTTTTGGCAGGTGAAGGCAGGAGAACTTGAACTTTGTAGGTCAGCTAACATGCCATACAGAATTCTGAGCAATGCGAGCTGAATAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 90 bp | CAGAGTATAATTAATAGTTTCAGGGGTTGGTGCTTGCTTATGGGATaGGTTTCAAGTTGGGCCAGTTATTGGTTGGACTTTCCTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: QSIINSFRGWCLLMG*VSSWASYWLDFPAV Trigger: GACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAAGCAAGCACCAACCCCTGAAACTATTAATTATACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 90 bp | ACAGATGAAAAATTCTACATTAGTTTTATGAGGGATCTAGGGACCTaGACTCAGGGACTGTACTCACTGAGCCATCTTCCCAGCTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: TDEKFYISFMRDLGT*TQGLYSLSHLPSSR Trigger: TCTAGAGCTGGGAAGATGGCTCAGTGAGTACAGTCCCTGAGTTCAGGTCCCTAGATCCCTCATAAAACTAATGTAGAATTTTTCATCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 90 bp | TGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTACATTGCTGATTaGATTGCAAACTGGTACAACCACTCTGGAAATCAATCTGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: CGEDVEKEEHSYIAD*IANWYNHSGNQSVG Trigger: ACCTACAGATTGATTTCCAGAGTGGTTGTACCAGTTTGCAATCCAATCAGCAATGTAAGAGTGCTCTTCTTTCTCCACATCCTCACCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR GCA 90 bp | GATGTCAATTACAAACTCTGCAAAATGTTTGTCATGTTGAGATGCTaGCTAGGGGGATCAGATCATGTCTGGAAGCTTTGCTCTGAATCT | + |
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Preference number: 1 (lower is better) Translates to: DVNYKLCKMFVMLRC*LGGSDHVWKLCSES Trigger: AGATTCAGAGCAAAGCTTCCAGACATGATCTGATCCCCCTAGGCAGCATCTCAACATGACAAACATTTTGCAGAGTTTGTAATTGACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR GCA 90 bp | GGTTTCAAGTTGGGCCAGTTATTGGTTGGACTTTCCTGCAGTCTCTaGTCTATCTTTGTTCTTGCATTTCTTTTAGGCAGGACAAATTTG | + |
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Preference number: 1 (lower is better) Translates to: GFKLGQLLVGLSCSL*SIFVLAFLLGRTNL Trigger: CAAATTTGTCCTGCCTAAAAGAAATGCAAGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 90 bp | GTGGAGAAAGAAGAGCACTCTTACATTGCTGATTGGATTGCAAACTaGTACAACCACTCTGGAAATCAATCTGTAGGTTCCTCAGAAAAT | + |
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Preference number: 1 (lower is better) Translates to: VEKEEHSYIADWIAN*YNHSGNQSVGSSEN Trigger: ATTTTCTGAGGAACCTACAGATTGATTTCCAGAGTGGTTGTACCAGTTTGCAATCCAATCAGCAATGTAAGAGTGCTCTTCTTTCTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR GCA 90 bp | CAACACAGATGTCCCTCAGACAATAAAATGCATACAATGAGTACGTaGTTCATTTACACAATGAAATACTATTCAGCTCGCATTGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: QHRCPSDNKMHTMST*FIYTMKYYSARIAQ Trigger: CTGAGCAATGCGAGCTGAATAGTATTTCATTGTGTAAATGAAGCACGTACTCATTGTATGCATTTTATTGTCTGAGGGACATCTGTGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 90 bp | ATCTGTGATAGCCAGAAGCTAAAAACAATTCAGATGTCCCACAAATaGAGAATGGATACAGAAAATGTGGTTCATTTACACAAAGGGATA | + |
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Preference number: 1 (lower is better) Translates to: ICDSQKLKTIQMSHK*RMDTENVVHLHKGI Trigger: TATCCCTTTGTGTAAATGAACCACATTTTCTGTATCCATTCTTCATTTGTGGGACATCTGAATTGTTTTTAGCTTCTGGCTATCACAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGGGGTGACAGCACATGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTGAGGGTGGACCTGGATaGGGCAAAGACTGGACTGTA | + |
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Preference number: 2 (lower is better) Translates to: KTGVTAHVVRMWRKKSTLEGGPG*GKDWTV Trigger: TACAGTCCAGTCTTTGCCCCATCCAGGTCCACCCTC...AAGAGTGCTCTTCTTTCTCCACATCCTCACCACATGTGCTGTCACCCCAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGGGGTGACAGCACATGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTGCAGAAGGGCCTAAGTaGGGATGCTTCAATCACACT | + |
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Preference number: 2 (lower is better) Translates to: KTGVTAHVVRMWRKKSTLAEGPK*GCFNHT Trigger: AGTGTGATTGAAGCATCCTCACTTAGGCCCTTCTGC...AAGAGTGCTCTTCTTTCTCCACATCCTCACCACATGTGCTGTCACCCCAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CAA 90 bp | GGGTTGGTGCTTGCTTATGGGATGGGTTTCAAGTTGGGCCAGTTATaGGTTGGACTTTCCTGCAGTCTCTGCTCTATCTTTGTTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: GLVLAYGMGFKLGQL*VGLSCSLCSIFVLA Trigger: TGCAAGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAAGCAAGCACCAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR TCA 90 bp | TATGAGGGATCTAGGGACCTGAACTCAGGGACTGTACTCACTGAGCCATCTTCCTTACACCAGGCAGAATaGCTAAGATCAAAAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: YEGSRDLNSGTVLTEPSSLHQAE*LRSKTG Trigger: CCCAGTTTTTGATCTTAGTCATTCTGCCTGGTGTAA...GGAAGATGGCTCAGTGAGTACAGTCCCTGAGTTCAGGTCCCTAGATCCCTCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CAA 90 bp | TGGTGCTTGCTTATGGGATGGGTTTCAAGTTGGGCCAGTTATTGGTaGGACTTTCCTGCAGTCTCTGCTCTATCTTTGTTCTTGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: WCLLMGWVSSWASYW*DFPAVSALSLFLHF Trigger: GAAATGCAAGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAAGCAAGCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR GCA 90 bp | TATGAGGGATCTAGGGACCTGAACTCAGGGACTGTACTCACTGAGCCATCTTCCCATGTCTGGAAGCTTTaGTCTGAATCTATTTTGTAC | + |
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Preference number: 2 (lower is better) Translates to: YEGSRDLNSGTVLTEPSSHVWKL*SESILY Trigger: GTACAAAATAGATTCAGAGCAAAGCTTCCAGACATG...GGAAGATGGCTCAGTGAGTACAGTCCCTGAGTTCAGGTCCCTAGATCCCTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGCATGTGGTGAGGATGTaGAGAAAGAAGAGCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: QLFNPSFNSSVRVPILHLHVVRM*RKKSTL Trigger: AAGAGTGCTCTTCTTTCTCCACATCCTCACCACATG...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CAA 90 bp | ACAGCACATGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTACATaGCTGATTGGATTGCAAACTGGTACAACCACTCTGGAAATCAAT | + |
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Preference number: 2 (lower is better) Translates to: TAHVVRMWRKKSTLT*LIGLQTGTTTLEIN Trigger: ATTGATTTCCAGAGTGGTTGTACCAGTTTGCAATCCAATCAGCAATGTAAGAGTGCTCTTCTTTCTCCACATCCTCACCACATGTGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGGGACTTCATGAGTTTTaGAGTCAAATGGATGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: QLFNPSFNSSVRVPILHLGLHEF*SQMDGA Trigger: AGCTCCATCCATTTGACTGCAAAACTCATGAAGTCC...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | AACAAGCAGAAGGGCCTAAGTGAGGATGCTTCAATCACACTTGGAAGGAAGAAGATTGTGAAACCCTTCTaGACTGGGCTTGAGATAAAT | + |
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Preference number: 2 (lower is better) Translates to: NKQKGLSEDASITLGRKKIVKPF*TGLEIN Trigger: ATTTATCTCAAGCCCAGTCCAGAAGGGTTTCACAAT...CTTCTTCCTTCCAAGTGTGATTGAAGCATCCTCACTTAGGCCCTTCTGCTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGTTCTTGGAGACAGGTTaGAGGAAGAATAGGATAAGG | + |
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Preference number: 2 (lower is better) Translates to: QLFNPSFNSSVRVPILHLFLETG*RKNRIR Trigger: CCTTATCCTATTCTTCCTCCAACCTGTCTCCAAGAA...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGCTGGTACAACCACTCTaGAAATCAATCTGTAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: QLFNPSFNSSVRVPILHLLVQPL*KSICRF Trigger: GAACCTACAGATTGATTTCCAGAGTGGTTGTACCAG...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR TCA 90 bp | GCTGACCTACAAAGTTCAAGTTCTCCTGCCTTCACCTGCCAAAAAGCTAGAATCCCCCTATCCCATTTTTaGACTCTTAAATGGTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: ADLQSSSSPAFTCQKARIPLSHF*TLKWFQ Trigger: TTGAAACCATTTAAGAGTTCAAAAATGGGATAGGGG...GATTCTAGCTTTTTGGCAGGTGAAGGCAGGAGAACTTGAACTTTGTAGGTCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGGCTTCATTTACACAATaGAATACTATTCAGCTCGCA | + |
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Preference number: 2 (lower is better) Translates to: QLFNPSFNSSVRVPILHLASFTQ*NTIQLA Trigger: TGCGAGCTGAATAGTATTTCATTGTGTAAATGAAGC...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR GCA 90 bp | CATGTAGGTTCTATCCTCTATAGGCATTCTCTTGTTAATGGGAATTACTGTCAACAAAGCATGTCCAGGTaGCCTGTAGAGAAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HVGSILYRHSLVNGNYCQQSMSR*PVEKKE Trigger: TTCTTTCTTCTCTACAGGGCACCTGGACATGCTTTG...TTGACAGTAATTCCCATTAACAAGAGAATGCCTATAGAGGATAGAACCTACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CACTATGTTCATAGCAGCCTTATCTGTGATAGCCAGAAGCTAAAAACAATTCAGACTGAAACATCTTCTTaGAGACAGGTTGGAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: HYVHSSLICDSQKLKTIQTETSS*RQVGGR Trigger: TCTTCCTCCAACCTGTCTCCAAGAAGATGTTTCAGT...CTGAATTGTTTTTAGCTTCTGGCTATCACAGATAAGGCTGCTATGAACATAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR TCA 90 bp | CACTATGTTCATAGCAGCCTTATCTGTGATAGCCAGAAGCTAAAAACAATTCAGCTGGAAGCTTTGCTCTaGATCTATTTTGTACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HYVHSSLICDSQKLKTIQLEALL*IYFVLQ Trigger: TTGGAGTACAAAATAGATTCAGAGCAAAGCTTCCAG...CTGAATTGTTTTTAGCTTCTGGCTATCACAGATAAGGCTGCTATGAACATAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTAGGTTCTATCCTCTATAGGCATTCTCTTGTTAATGGGAATTACTGTCAAGGATCAGATCATGTCTaGAAGCTTTGCTCTGAATCT | + |
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Preference number: 2 (lower is better) Translates to: HVGSILYRHSLVNGNYCQGSDHV*KLCSES Trigger: AGATTCAGAGCAAAGCTTCCAGACATGATCTGATCC...TTGACAGTAATTCCCATTAACAAGAGAATGCCTATAGAGGATAGAACCTACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR TCA 90 bp | CACTATGTTCATAGCAGCCTTATCTGTGATAGCCAGAAGCTAAAAACAATTCAGTCACACGTACATCTGTaGCATTTTGATCAAATCCAT | + |
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Preference number: 2 (lower is better) Translates to: HYVHSSLICDSQKLKTIQSHVHL*HFDQIH Trigger: ATGGATTTGATCAAAATGTCACAGATGTACGTGTGA...CTGAATTGTTTTTAGCTTCTGGCTATCACAGATAAGGCTGCTATGAACATAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTAGGTTCTATCCTCTATAGGCATTCTCTTGTTAATGGGAATTACTGTCAATTGATCTGCAGTTCCTaGGAGATCATGATCAATCAA | + |
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Preference number: 2 (lower is better) Translates to: HVGSILYRHSLVNGNYCQLICSS*EIMINQ Trigger: TTGATTGATCATGATCTCCCAGGAACTGCAGATCAA...TTGACAGTAATTCCCATTAACAAGAGAATGCCTATAGAGGATAGAACCTACATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CCA 90 bp | CATGTAGGTTCTATCCTCTATAGGCATTCTCTTGTTAATGGGAATTACTGTCAACCCACAAATGAAGAATaGATACAGAAAATGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: HVGSILYRHSLVNGNYCQPTNEE*IQKMWF Trigger: GAACCACATTTTCTGTATCCATTCTTCATTTGTGGG...TTGACAGTAATTCCCATTAACAAGAGAATGCCTATAGAGGATAGAACCTACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGTTCAGGGGTTGGTGCTaGCTTATGGGATGGGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: QLFNPSFNSSVRVPILHLFRGWC*LMGWVS Trigger: TGAAACCCATCCCATAAGCAAGCACCAACCCCTGAA...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | GCTCGCATTGCTCAGAATTCTGTATGGCATGTTAGCTaGCCTACAAAGTTCAAGTTCTCCTGCCTTCACCTG | + |
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Preference number: 3 (lower is better) Translates to: ARIAQNSVWHVS*PTKFKFSCLHL Trigger: CAGGTGAAGGCAGGAGAACTTGAACTTTGTAGGTCAGCTAACATGCCATACAGAATTCTGAGCAATGCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | TCAAGTCTCTACCAGATTAGACACATCTTCTCCTACTaGGGTCAGACCAAGCAGTCCTGTTGGGTAACAGGT | + |
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Preference number: 3 (lower is better) Translates to: SSLYQIRHIFSY*GQTKQSCWVTG Trigger: ACCTGTTACCCAACAGGACTGCTTGGTCTGACCTCAGTAGGAGAAGATGTGTCTAATCTGGTAGAGACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 72 bp | CACCTTACACCAGGCAGAATGACTAAGATCAAAAACTaGGGTGACAGCACATGTGGTGAGGATGTGGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: HLTPGRMTKIKN*GDSTCGEDVEK Trigger: TTTCTCCACATCCTCACCACATGTGCTGTCACCCCAGTTTTTGATCTTAGTCATTCTGCCTGGTGTAAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CAA 90 bp | AACAAGCAGAAGGGCCTAAGTGAGGATGCTTCAATCACACTTGGAAGGAAGAAGAAAATGTTTGTCATGTaGAGATGCTGCCTAGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: NKQKGLSEDASITLGRKKKMFVM*RCCLGG Trigger: TCCCCCTAGGCAGCATCTCAACATGACAAACATTTT...CTTCTTCCTTCCAAGTGTGATTGAAGCATCCTCACTTAGGCCCTTCTGCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGACCTACAAAGTTCAAGTTCTCCTGCCTTCACCTGCCAAAAAGCTAGAATCAGGTTCCTCAGAAAATaGGAAATAGGTCTACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: ADLQSSSSPAFTCQKARIRFLRK*EIGLPS Trigger: GCTGGGTAGACCTATTTCCAATTTTCTGAGGAACCT...GATTCTAGCTTTTTGGCAGGTGAAGGCAGGAGAACTTGAACTTTGTAGGTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | AGAGCTCATGAAGGTAAACAAGCAGAAGGGCCTAAGTaGGGATGCTTCAATCACACTTGGAAGGAAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: RAHEGKQAEGPK*GCFNHTWKEEE Trigger: TTCTTCTTCCTTCCAAGTGTGATTGAAGCATCCTCACTTAGGCCCTTCTGCTTGTTTACCTTCATGAGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | AAAAACCCAAGAGAGGCTCTACCATACCACAAGGACTaGAGTTCCACTATATTCATAGCAGCTGTAGTAGCC | + |
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Preference number: 3 (lower is better) Translates to: KNPREALPYHKD*SSTIFIAAVVA Trigger: GGCTACTACAGCTGCTATGAATATAGTGGAACTTCAGTCCTTGTGGTATGGTAGAGCCTCTCTTGGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR GCA 72 bp | TACAAACTCTGCAAAATGTTTGTCATGTTGAGATGCTaGCTAGGGGGATCAGATCATGTCTGGAAGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: YKLCKMFVMLRC*LGGSDHVWKLC Trigger: GCAAAGCTTCCAGACATGATCTGATCCCCCTAGGCAGCATCTCAACATGACAAACATTTTGCAGAGTTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 72 bp | TTATGGGATGGGTTTCAAGTTGGGCCAGTTATTGGTTaGACTTTCCTGCAGTCTCTGCTCTATCTTTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: LWDGFQVGPVIG*TFLQSLLYLCS Trigger: AGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 72 bp | ATGTTGAGATGCTGCCTAGGGGGATCAGATCATGTCTaGAAGCTTTGCTCTGAATCTATTTTGTACTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: MLRCCLGGSDHV*KLCSESILYSK Trigger: TTTGGAGTACAAAATAGATTCAGAGCAAAGCTTCCAGACATGATCTGATCCCCCTAGGCAGCATCTCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 72 bp | AAAGTTTTGTGGGTAGGTTGGTATCCTTATTGGAAATaGTTTTACCTGAAGACCCAGCTATACTGCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: KVLWVGWYPYWK*FYLKTQLYCSW Trigger: CCAGGAGCAGTATAGCTGGGTCTTCAGGTAAAACCATTTCCAATAAGGATACCAACCTACCCACAAAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CCA 72 bp | ATTAATAGTTTCAGGGGTTGGTGCTTGCTTATGGGATaGGTTTCAAGTTGGGCCAGTTATTGGTTGGACTTT | + |
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Preference number: 3 (lower is better) Translates to: INSFRGWCLLMG*VSSWASYWLDF Trigger: AAAGTCCAACCAATAACTGGCCCAACTTGAAACCCATCCCATAAGCAAGCACCAACCCCTGAAACTATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR GCA 72 bp | TGGACTTTCCTGCAGTCTCTGCTCTATCTTTGTTCTTaGATTTCTTTTAGGCAGGACAAATTTGGGGTCAAA | + |
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Preference number: 3 (lower is better) Translates to: WTFLQSLLYLCS*ISFRQDKFGVK Trigger: TTTGACCCCAAATTTGTCCTGCCTAAAAGAAATGCAAGAACAAAGATAGAGCAGAGACTGCAGGAAAGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGTACATCTGTGACATTTaGATCAAATCCATCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: QLFNPSFNSSVRVPILHLYICDI*IKSIPY Trigger: ATAGGGGATGGATTTGATCAAAATGTCACAGATGTA...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGTCTATAGGCATTCTCTaGTTAATGGGAATTACTGTC | + |
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Preference number: 3 (lower is better) Translates to: QLFNPSFNSSVRVPILHLSIGIL*LMGITV Trigger: GACAGTAATTCCCATTAACAAGAGAATGCCTATAGA...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | TCCACTATATTCATAGCAGCTGTAGTAGCCAAACCCTaGAAACAACACAGATGTCCCTCAGACAATAAAATG | + |
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Preference number: 3 (lower is better) Translates to: STIFIAAVVAKP*KQHRCPSDNKM Trigger: CATTTTATTGTCTGAGGGACATCTGTGTTGTTTTCAGGGTTTGGCTACTACAGCTGCTATGAATATAGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | TTCTCAATCGTAGTAAAGTGCTGTATTTATAGTGATTaGAAACTCAAAGTCCTTTCCACCTTACACCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FSIVVKCCIYSD*KLKVLSTLHQA Trigger: TGCCTGGTGTAAGGTGGAAAGGACTTTGAGTTTTCAATCACTATAAATACAGCACTTTACTACGATTGAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR GCA 72 bp | TGTCCCTCAGACAATAAAATGCATACAATGAGTACGTaGTTCATTTACACAATGAAATACTATTCAGCTCGC | + |
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Preference number: 3 (lower is better) Translates to: CPSDNKMHTMST*FIYTMKYYSAR Trigger: GCGAGCTGAATAGTATTTCATTGTGTAAATGAAGCACGTACTCATTGTATGCATTTTATTGTCTGAGGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR TCA 72 bp | AGCCAGAAGCTAAAAACAATTCAGATGTCCCACAAATaGAGAATGGATACAGAAAATGTGGTTCATTTACAC | + |
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Preference number: 3 (lower is better) Translates to: SQKLKTIQMSHK*RMDTENVVHLH Trigger: GTGTAAATGAACCACATTTTCTGTATCCATTCTTCATTTGTGGGACATCTGAATTGTTTTTAGCTTCTGGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR TCA 90 bp | TATGAGGGATCTAGGGACCTGAACTCAGGGACTGTACTCACTGAGCCATCTTCCCTGGGACATGGCTACTaGATACAACAGGGGGTTACA | + |
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Preference number: 4 (lower is better) Translates to: YEGSRDLNSGTVLTEPSSLGHGY*IQQGVT Trigger: TGTAACCCCCTGTTGTATTCAGTAGCCATGTCCCAG...GGAAGATGGCTCAGTGAGTACAGTCCCTGAGTTCAGGTCCCTAGATCCCTCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR TCA 90 bp | AACAAGCAGAAGGGCCTAAGTGAGGATGCTTCAATCACACTTGGAAGGAAGAAGCAGACACCACCTTATTaGGGTCCAGAGAAGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: NKQKGLSEDASITLGRKKQTPPY*GPEKKW Trigger: CCATTTCTTCTCTGGACCTCAATAAGGTGGTGTCTG...CTTCTTCCTTCCAAGTGTGATTGAAGCATCCTCACTTAGGCCCTTCTGCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR CCA 90 bp | AACAAGCAGAAGGGCCTAAGTGAGGATGCTTCAATCACACTTGGAAGGAAGAAGAGAGTCTCTGGGACATaGCTACTGAATACAACAGGG | + |
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Preference number: 4 (lower is better) Translates to: NKQKGLSEDASITLGRKKRVSGT*LLNTTG Trigger: CCCTGTTGTATTCAGTAGCCATGTCCCAGAGACTCT...CTTCTTCCTTCCAAGTGTGATTGAAGCATCCTCACTTAGGCCCTTCTGCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR CCA 90 bp | AAAACTGGGGTGACAGCACATGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTGAAACTGCTGTAACATaGGAAGAGCAGGTAGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KTGVTAHVVRMWRKKSTLETAVT*EEQVEK Trigger: CTTCTCTACCTGCTCTTCCCATGTTACAGCAGTTTC...AAGAGTGCTCTTCTTTCTCCACATCCTCACCACATGTGCTGTCACCCCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR CCA 90 bp | GCTGACCTACAAAGTTCAAGTTCTCCTGCCTTCACCTGCCAAAAAGCTAGAATCTGTATGCAGAGTCTCTaGGACATGGCTACTGAATAC | + |
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Preference number: 4 (lower is better) Translates to: ADLQSSSSPAFTCQKARICMQSL*DMATEY Trigger: GTATTCAGTAGCCATGTCCCAGAGACTCTGCATACA...GATTCTAGCTTTTTGGCAGGTGAAGGCAGGAGAACTTGAACTTTGTAGGTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CAA 72 bp | GTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTACATaGCTGATTGGATTGCAAACTGGTACAACCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: VVRMWRKKSTLT*LIGLQTGTTTL Trigger: CAGAGTGGTTGTACCAGTTTGCAATCCAATCAGCAATGTAAGAGTGCTCTTCTTTCTCCACATCCTCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR GCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGAATCAATACAGCGCCTaGCACGATGAAAACCAACAG | + |
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Preference number: 4 (lower is better) Translates to: QLFNPSFNSSVRVPILHLNQYSA*HDENQQ Trigger: CTGTTGGTTTTCATCGTGGCAGGCGCTGTATTGATT...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR CCA 90 bp | CAGTTGTTCAATCCTTCCTTCAACTCTTCCGTAAGAGTCCCCATACTACATCTGAGAGAAGACACTCAATaGCCACAAAGAACCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QLFNPSFNSSVRVPILHLREDTQ*PQRTQR Trigger: TCTTTGGGTTCTTTGTGGCCATTGAGTGTCTTCTCT...CAGATGTAGTATGGGGACTCTTACGGAAGAGTTGAAGGAAGGATTGAACAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| 3UTR CAA 72 bp | CCACTCTGGAAATCAATCTGTAGGTTCCTCAGAAAATaGGAAATAGGTCTACCCAGCTATACTACTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: PLWKSICRFLRK*EIGLPSYTTLK Trigger: CTTAAGAGTAGTATAGCTGGGTAGACCTATTTCCAATTTTCTGAGGAACCTACAGATTGATTTCCAGAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR CAA 90 bp | TATGAGGGATCTAGGGACCTGAACTCAGGGACTGTACTCACTGAGCCATCTTCCATGAAAACCAACAGTTaGTTGATCCGTATGTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: YEGSRDLNSGTVLTEPSSMKTNS*LIRMSA Trigger: TGCTGACATACGGATCAACAAACTGTTGGTTTTCAT...GGAAGATGGCTCAGTGAGTACAGTCCCTGAGTTCAGGTCCCTAGATCCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGGGGTGACAGCACATGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTACAGACACCACCTTATaGAGGTCCAGAGAAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: KTGVTAHVVRMWRKKSTLTDTTL*RSREEM Trigger: CATTTCTTCTCTGGACCTCAATAAGGTGGTGTCTGT...AAGAGTGCTCTTCTTTCTCCACATCCTCACCACATGTGCTGTCACCCCAGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS GCA 90 bp | GTAGGAGACTATGATGGTGGTACTACTGACAATCAATACAGCGCCTaGCACGATGAAAACCAACAGTTTGTTGATCCGTATGTCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: VGDYDGGTTDNQYSA*HDENQQFVDPYVST Trigger: TGTGCTGACATACGGATCAACAAACTGTTGGTTTTCATCGTGGCAGGCGCTGTATTGATTGTCAGTAGTACCACCATCATAGTCTCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055517.3 ENSMUST00000216443.3 |
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| CDS-3UTR CAA 90 bp | AAAACTGGGGTGACAGCACATGTGGTGAGGATGTGGAGAAAGAAGAGCACTCTTTTTTTGAGGAAAACTTaGGCTTTAGCAACTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: KTGVTAHVVRMWRKKSTLFLRKT*ALATVL Trigger: CAGGACAGTTGCTAAAGCCAAAGTTTTCCTCAAAAA...AAGAGTGCTCTTCTTTCTCCACATCCTCACCACATGTGCTGTCACCCCAGTTTT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000216443.3 |
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| CDS CAA 90 bp | CTGACAATCAATACAGCGCCTGCCACGATGAAAACCAACAGTTTGTaGATCCGTATGTCAGCACATATGAGGGAAAGGATAGGAGACATG | + |
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Preference number: 6 (lower is better) Translates to: LTINTAPATMKTNSL*IRMSAHMRERIGDM Trigger: CATGTCTCCTATCCTTTCCCTCATATGTGCTGACATACGGATCAACAAACTGTTGGTTTTCATCGTGGCAGGCGCTGTATTGATTGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055517.3 ENSMUST00000216443.3 |
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| CDS CAA 90 bp | CTACTGACAATCAATACAGCGCCTGCCACGATGAAAACCAACAGTTaGTTGATCCGTATGTCAGCACATATGAGGGAAAGGATAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LLTINTAPATMKTNS*LIRMSAHMRERIGD Trigger: GTCTCCTATCCTTTCCCTCATATGTGCTGACATACGGATCAACAAACTGTTGGTTTTCATCGTGGCAGGCGCTGTATTGATTGTCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055517.3 ENSMUST00000216443.3 |
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| CDS CAA 72 bp | ATCAATACAGCGCCTGCCACGATGAAAACCAACAGTTaGTTGATCCGTATGTCAGCACATATGAGGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: INTAPATMKTNS*LIRMSAHMRER Trigger: CCTTTCCCTCATATGTGCTGACATACGGATCAACAAACTGTTGGTTTTCATCGTGGCAGGCGCTGTATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055517.3 ENSMUST00000216443.3 |
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| CDS CAA 72 bp | AATACAGCGCCTGCCACGATGAAAACCAACAGTTTGTaGATCCGTATGTCAGCACATATGAGGGAAAGGATA | + |
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Preference number: 6 (lower is better) Translates to: NTAPATMKTNSL*IRMSAHMRERI Trigger: TATCCTTTCCCTCATATGTGCTGACATACGGATCAACAAACTGTTGGTTTTCATCGTGGCAGGCGCTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055517.3 ENSMUST00000216443.3 |
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