Pregenerated sensors for OLFR1000 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000075215

Ensembl transcript IDs: ENSMUST00000099921.2, ENSMUST00000213837.2, ENSMUST00000216571.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	AACAAGGACTCCCTTGCAGCCTCTTGTTCTCACTCTAGTGGTCTTTaGCTTATATTTTGCTCTCACAACATAGATATGTCACAGAAAGAA	+
Preference number: 1 (lower is better) Translates to: NKDSLAASCSHSSGL*LIFCSHNIDMSQKE Trigger: TTCTTTCTGTGACATATCTATGTTGTGAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGAGGCTGCAAGGGAGTCCTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
3UTR-3UTR GCA 90 bp	GATCAGAACACTCATTACTCTTCCAGAGAACCTGGGTTCTTTTCCCAGCACACAGAACAAGGACTCCCTTaGAGCCTCTTGTTCTCACTC	+
Preference number: 2 (lower is better) Translates to: DQNTHYSSREPGFFSQHTEQGLP*SLLFSL Trigger: GAGTGAGAACAAGAGGCTGCAAGGGAGTCCTTGTTC...TGTGTGCTGGGAAAAGAACCCAGGTTCTCTGGAAGAGTAATGAGTGTTCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
3UTR-3UTR CCA 90 bp	ACACACACACACACACACACCACACCACACAAAAGAGACAGAGACATAGACAAACTCTTCCAGAGAACCTaGGTTCTTTTCCCAGCACAC	+
Preference number: 2 (lower is better) Translates to: THTHTHTTPHKRDRDIDKLFQRT*VLFPAH Trigger: GTGTGCTGGGAAAAGAACCCAGGTTCTCTGGAAGAG...TTTGTCTATGTCTCTGTCTCTTTTGTGTGGTGTGGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
3UTR-3UTR GCA 90 bp	AATTCTTCTACCAAAACCAATACTATAGGTGACTGGAGAGATAACCCATCAGATGAACAAGGACTCCCTTaGAGCCTCTTGTTCTCACTC	+
Preference number: 2 (lower is better) Translates to: NSSTKTNTIGDWRDNPSDEQGLP*SLLFSL Trigger: GAGTGAGAACAAGAGGCTGCAAGGGAGTCCTTGTTC...ATCTGATGGGTTATCTCTCCAGTCACCTATAGTATTGGTTTTGGTAGAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
3UTR-3UTR CCA 90 bp	AATTCTTCTACCAAAACCAATACTATAGGTGACTGGAGAGATAACCCATCAGATCTCTTCCAGAGAACCTaGGTTCTTTTCCCAGCACAC	+
Preference number: 2 (lower is better) Translates to: NSSTKTNTIGDWRDNPSDLFQRT*VLFPAH Trigger: GTGTGCTGGGAAAAGAACCCAGGTTCTCTGGAAGAG...ATCTGATGGGTTATCTCTCCAGTCACCTATAGTATTGGTTTTGGTAGAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
3UTR GCA 72 bp	TCTTGTTCTCACTCTAGTGGTCTTTGCCTTATATTTTaGTCTCACAACATAGATATGTCACAGAAAGAATTC	+
Preference number: 3 (lower is better) Translates to: SCSHSSGLCLIF*SHNIDMSQKEF Trigger: GAATTCTTTCTGTGACATATCTATGTTGTGAGAGCAAAATATAAGGCAAAGACCACTAGAGTGAGAACAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR TCA 90 bp	GATCAGAACACTCATTACTCTTCCAGAGAACCTGGGTTCTTTTCCCAGCACACAGCGACAGTCACCAAGTaGGAGGAACAAGTTGAGAAG	+
Preference number: 4 (lower is better) Translates to: DQNTHYSSREPGFFSQHTATVTK*EEQVEK Trigger: CTTCTCAACTTGTTCCTCTCACTTGGTGACTGTCGC...TGTGTGCTGGGAAAAGAACCCAGGTTCTCTGGAAGAGTAATGAGTGTTCTGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR TCA 90 bp	GTTGTGATCAGGCAGAACAAGGACTCCCTTGCAGCCTCTTGTTCTCACTCTAGTTGGGTCGAACATAGATaGAGAAAAGAGTCCCATACA	+
Preference number: 4 (lower is better) Translates to: VVIRQNKDSLAASCSHSSWVEHR*RKESHT Trigger: TGTATGGGACTCTTTTCTTCATCTATGTTCGACCCA...ACTAGAGTGAGAACAAGAGGCTGCAAGGGAGTCCTTGTTCTGCCTGATCACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR CCA 90 bp	CTGCCACAAGGTTGTGAAATAGGTTGTGATCAGGCAGAACAAGGACTCCCTTGCAGCCCACAAAAGAGATaGCTTTGTTCCTTGCAAAAA	+
Preference number: 4 (lower is better) Translates to: LPQGCEIGCDQAEQGLPCSPQKR*LCSLQK Trigger: TTTTTGCAAGGAACAAAGCCATCTCTTTTGTGGGCT...GCAAGGGAGTCCTTGTTCTGCCTGATCACAACCTATTTCACAACCTTGTGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR CCA 90 bp	GTTGTGATCAGGCAGAACAAGGACTCCCTTGCAGCCTCTTGTTCTCACTCTAGTAGCCCACAAAAGAGATaGCTTTGTTCCTTGCAAAAA	+
Preference number: 4 (lower is better) Translates to: VVIRQNKDSLAASCSHSSSPQKR*LCSLQK Trigger: TTTTTGCAAGGAACAAAGCCATCTCTTTTGTGGGCT...ACTAGAGTGAGAACAAGAGGCTGCAAGGGAGTCCTTGTTCTGCCTGATCACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR GCA 90 bp	CTGCCACAAGGTTGTGAAATAGGTTGTGATCAGGCAGAACAAGGACTCCCTTGCACACCTATTAGGAAGTaGTTCTTCTTCAAAGTTCTC	+
Preference number: 4 (lower is better) Translates to: LPQGCEIGCDQAEQGLPCTPIRK*FFFKVL Trigger: GAGAACTTTGAAGAAGAAGCACTTCCTAATAGGTGT...GCAAGGGAGTCCTTGTTCTGCCTGATCACAACCTATTTCACAACCTTGTGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR TCA 90 bp	AATTCTTCTACCAAAACCAATACTATAGGTGACTGGAGAGATAACCCATCAGATGCGACAGTCACCAAGTaGGAGGAACAAGTTGAGAAG	+
Preference number: 4 (lower is better) Translates to: NSSTKTNTIGDWRDNPSDATVTK*EEQVEK Trigger: CTTCTCAACTTGTTCCTCTCACTTGGTGACTGTCGC...ATCTGATGGGTTATCTCTCCAGTCACCTATAGTATTGGTTTTGGTAGAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR GCA 90 bp	ACACACACACACACACACACCACACCACACAAAAGAGACAGAGACATAGACAAAACACCTATTAGGAAGTaGTTCTTCTTCAAAGTTCTC	+
Preference number: 4 (lower is better) Translates to: THTHTHTTPHKRDRDIDKTPIRK*FFFKVL Trigger: GAGAACTTTGAAGAAGAAGCACTTCCTAATAGGTGT...TTTGTCTATGTCTCTGTCTCTTTTGTGTGGTGTGGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR CCA 90 bp	GATCAGAACACTCATTACTCTTCCAGAGAACCTGGGTTCTTTTCCCAGCACACACAACATACAGAGATGTaGAGACATAATAAGTGTGTA	+
Preference number: 4 (lower is better) Translates to: DQNTHYSSREPGFFSQHTQHTEM*RHNKCV Trigger: TACACACTTATTATGTCTCCACATCTCTGTATGTTG...TGTGTGCTGGGAAAAGAACCCAGGTTCTCTGGAAGAGTAATGAGTGTTCTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR TCA 90 bp	AACCTGGGTTCTTTTCCCAGCACACAAATGTTAGCTTACAACTGTCTATTTAAATGGGTCGAACATAGATaGAGAAAAGAGTCCCATACA	+
Preference number: 4 (lower is better) Translates to: NLGSFPSTQMLAYNCLFKWVEHR*RKESHT Trigger: TGTATGGGACTCTTTTCTTCATCTATGTTCGACCCA...TTTAAATAGACAGTTGTAAGCTAACATTTGTGTGCTGGGAAAAGAACCCAGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS-3UTR CCA 90 bp	AACCTGGGTTCTTTTCCCAGCACACAAATGTTAGCTTACAACTGTCTATTTAAACAACATACAGAGATGTaGAGACATAATAAGTGTGTA	+
Preference number: 4 (lower is better) Translates to: NLGSFPSTQMLAYNCLFKQHTEM*RHNKCV Trigger: TACACACTTATTATGTCTCCACATCTCTGTATGTTG...TTTAAATAGACAGTTGTAAGCTAACATTTGTGTGCTGGGAAAAGAACCCAGGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213837.2 ENSMUST00000216571.2
CDS CCA 72 bp	GAAATAAATCCCAACAACCAACAACATACAGAGATGTaGAGACATAATAAGTGTGTACAGCAAGGGCTTACA	+
Preference number: 6 (lower is better) Translates to: EINPNNQQHTEM*RHNKCVQQGLT Trigger: TGTAAGCCCTTGCTGTACACACTTATTATGTCTCCACATCTCTGTATGTTGTTGGTTGTTGGGATTTATTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099921.2 ENSMUST00000213837.2 ENSMUST00000216571.2