Pregenerated sensors for OLFR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069823Ensembl transcript IDs: ENSMUST00000120303.9
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTCTTTCACCGAGGCCAGACTAGGTAGTATTCTGATGTGTATGTaGTGGGGGCCTCATCTCAGCTGGGGTATGCTGCCTTGTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PSFTEARLGSILMCM*WGPHLSWGMLPCWW Trigger: CCACCAACAAGGCAGCATACCCCAGCTGAGATGAGGCCCCCATCACATACACATCAGAATACTACCTAGTCTGGCCTCGGTGAAAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CCA 90 bp | GCTGGGGTATGCTGCCTTGTTGGTGGCTCAGTGTCTGAGATATCCTaGGGGTGCAGTTTAGTTGAGATTGCTAGTCTTCCGATGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: AGVCCLVGGSVSEIS*GCSLVEIASLPMRS Trigger: TGACCTCATCGGAAGACTAGCAATCTCAACTAAACTGCACCCCCAGGATATCTCAGACACTGAGCCACCAACAAGGCAGCATACCCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR GCA 90 bp | GTATGCTGCCTTGTTGGTGGCTCAGTGTCTGAGATATCCTGGGGGTaGAGTTTAGTTGAGATTGCTAGTCTTCCGATGAGGTCATCGTCC | + |
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Preference number: 1 (lower is better) Translates to: VCCLVGGSVSEISWG*SLVEIASLPMRSSS Trigger: GGACGATGACCTCATCGGAAGACTAGCAATCTCAACTAAACTGCACCCCCAGGATATCTCAGACACTGAGCCACCAACAAGGCAGCATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CCA 90 bp | CTGGTTGGGTGTAAATATCTGCATTTGACTCTTCCAGCTGCTTGTTaGGCCTTTTGGAGGGCAGTCATGACAGACCCTTTTCATAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LVGCKYLHLTLPAAC*AFWRAVMTDPFHKD Trigger: GTCCTTATGAAAAGGGTCTGTCATGACTGCCCTCCAAAAGGCCCAACAAGCAGCTGGAAGAGTCAAATGCAGATATTTACACCCAACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CCA 90 bp | TGTAAATATCTGCATTTGACTCTTCCAGCTGCTTGTTGGGCCTTTTaGAGGGCAGTCATGACAGACCCTTTTCATAAGGACACCATAGTA | + |
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Preference number: 1 (lower is better) Translates to: CKYLHLTLPAACWAF*RAVMTDPFHKDTIV Trigger: TACTATGGTGTCCTTATGAAAAGGGTCTGTCATGACTGCCCTCCAAAAGGCCCAACAAGCAGCTGGAAGAGTCAAATGCAGATATTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR TCA 90 bp | CACCAGACCTCCCCACTCTCTGGGGCCTCAAGTCTCTCGAGGGTTAGGTGCACCAACTTTATATCAGGATaGACAGGAGTCCAGCATAGA | + |
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Preference number: 2 (lower is better) Translates to: HQTSPLSGASSLSRVRCTNFISG*TGVQHR Trigger: TCTATGCTGGACTCCTGTTCATCCTGATATAAAGTT...GGTGCACCTAACCCTCGAGAGACTTGAGGCCCCAGAGAGTGGGGAGGTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTCAAGTCTCTCGAGGGTTAGGTGCACCTTCTTTCACCGAGGCCAGACTAAGTAGGCAATTAGTATaGCTGGTGGGCTTCCATGGT | + |
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Preference number: 2 (lower is better) Translates to: GPQVSRGLGAPSFTEARLSRQLV*LVGFHG Trigger: ACCATGGAAGCCCACCAGCCATACTAATTGCCTACT...TAGTCTGGCCTCGGTGAAAGAAGGTGCACCTAACCCTCGAGAGACTTGAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCAAGTCTCTCGAGGGTTAGGTGCACCTTCTTTCACCGAGGCCAGACTAATTTGGGCTTGTCACTaGACTTCTTTTCTCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: GPQVSRGLGAPSFTEARLIWACH*TSFLSC Trigger: GCAAGAGAGAAAAGAAGTTCAGTGACAAGCCCAAAT...TAGTCTGGCCTCGGTGAAAGAAGGTGCACCTAACCCTCGAGAGACTTGAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTCAAGTCTCTCGAGGGTTAGGTGCACCTTCTTTCACCGAGGCCAGACTAGTAAATATCTGCATTTaGCTCTTCCAGCTGCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: GPQVSRGLGAPSFTEARLVNICI*LFQLLV Trigger: AACAAGCAGCTGGAAGAGTCAAATGCAGATATTTAC...TAGTCTGGCCTCGGTGAAAGAAGGTGCACCTAACCCTCGAGAGACTTGAGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAATTTCTTTTTACAGAGAAGGCTTCACCGGCCTCCCAGTTTGTCCCCCACTTCCAGCTGCTTGTTaGGCCTTTTGGAGGGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: SLISFYREGFTGLPVCPPLPAAC*AFWRAV Trigger: GACTGCCCTCCAAAAGGCCCAACAAGCAGCTGGAAG...TGGGGGACAAACTGGGAGGCCGGTGAAGCCTTCTCTGTAAAAAGAAATTAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGCAGATAGGAAGTTCAAGAGTTTGGATATTGCTGCTATTGAGTAAATTAGCTCTTCTCCATTTTTaGCCTTGTAGTTCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: ARQIGSSRVWILLLLSKLALLHF*PCSSSR Trigger: TCTGGAGGAACTACAAGGGCAAAAATGGAGAAGAGC...TAATTTACTCAATAGCAGCAATATCCAAACTCTTGAACTTCCTATCTGCCTGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR GCA 90 bp | ATGACAGACCCTTTTCATAAGGACACCATAGTATTAGTAATAGTGTCAGGCCTTGAGCTACACAGTTACTaGAGAGATAGAACAAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: MTDPFHKDTIVLVIVSGLELHSY*RDRTKS Trigger: AGACTTTGTTCTATCTCTGCAGTAACTGTGTAGCTC...AAGGCCTGACACTATTACTAATACTATGGTGTCCTTATGAAAAGGGTCTGTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR CAA 90 bp | GGGCCTCAAGTCTCTCGAGGGTTAGGTGCACCTTCTTTCACCGAGGCCAGACTAGACTCTTCCAGCTGCTaGTTGGGCCTTTTGGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GPQVSRGLGAPSFTEARLDSSSC*LGLLEG Trigger: GCCCTCCAAAAGGCCCAACAAGCAGCTGGAAGAGTC...TAGTCTGGCCTCGGTGAAAGAAGGTGCACCTAACCCTCGAGAGACTTGAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR GCA 72 bp | GTATGTGATGGGGGCCTCATCTCAGCTGGGGTATGCTaGCTTGTTGGTGGCTCAGTGTCTGAGATATCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VCDGGLISAGVC*LVGGSVSEISW Trigger: CCAGGATATCTCAGACACTGAGCCACCAACAAGGCAGCATACCCCAGCTGAGATGAGGCCCCCATCACATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR GCA 72 bp | TGTGTATGTGATGGGGGCCTCATCTCAGCTGGGGTATaGTGCCTTGTTGGTGGCTCAGTGTCTGAGATATCC | + |
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Preference number: 3 (lower is better) Translates to: CVCDGGLISAGV*CLVGGSVSEIS Trigger: GGATATCTCAGACACTGAGCCACCAACAAGGCAGCATACCCCAGCTGAGATGAGGCCCCCATCACATACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR-3UTR CAA 90 bp | CAAACCTCTCCCCTTCCCATATATCCTCCCCTCCCGTCTTCAAATAGAATGTCCCCTTGGGTCTTCCCCTaGAGCTGGATCCCAATTTGG | + |
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Preference number: 3 (lower is better) Translates to: QTSPLPIYPPLPSSNRMSPWVFP*SWIPIW Trigger: CCAAATTGGGATCCAGCTCAAGGGGAAGACCCAAGG...GGACATTCTATTTGAAGACGGGAGGGGAGGATATATGGGAAGGGGAGAGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CCA 72 bp | TGCTGCCTTGTTGGTGGCTCAGTGTCTGAGATATCCTaGGGGTGCAGTTTAGTTGAGATTGCTAGTCTTCCG | + |
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Preference number: 3 (lower is better) Translates to: CCLVGGSVSEIS*GCSLVEIASLP Trigger: CGGAAGACTAGCAATCTCAACTAAACTGCACCCCCAGGATATCTCAGACACTGAGCCACCAACAAGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR TCA 72 bp | GTTTCTGTCCCCTGGTTGGGTGTAAATATCTGCATTTaGCTCTTCCAGCTGCTTGTTGGGCCTTTTGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: VSVPWLGVNICI*LFQLLVGPFGG Trigger: CCCTCCAAAAGGCCCAACAAGCAGCTGGAAGAGTCAAATGCAGATATTTACACCCAACCAGGGGACAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR GCA 72 bp | CTTGTTGGTGGCTCAGTGTCTGAGATATCCTGGGGGTaGAGTTTAGTTGAGATTGCTAGTCTTCCGATGAGG | + |
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Preference number: 3 (lower is better) Translates to: LVGGSVSEISWG*SLVEIASLPMR Trigger: CCTCATCGGAAGACTAGCAATCTCAACTAAACTGCACCCCCAGGATATCTCAGACACTGAGCCACCAACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CCA 72 bp | CTGCATTTGACTCTTCCAGCTGCTTGTTGGGCCTTTTaGAGGGCAGTCATGACAGACCCTTTTCATAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LHLTLPAACWAF*RAVMTDPFHKD Trigger: GTCCTTATGAAAAGGGTCTGTCATGACTGCCCTCCAAAAGGCCCAACAAGCAGCTGGAAGAGTCAAATGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CCA 72 bp | ACAACAAAAGCCAGGCAGATAGGAAGTTCAAGAGTTTaGATATTGCTGCTATTGAGTAAATTACAAGTACAA | + |
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Preference number: 3 (lower is better) Translates to: TTKARQIGSSRV*ILLLLSKLQVQ Trigger: TTGTACTTGTAATTTACTCAATAGCAGCAATATCCAAACTCTTGAACTTCCTATCTGCCTGGCTTTTGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR TCA 72 bp | AGATCATTTATAATAGGATTGCTATTAAGTCCTTTCTaGTGTCAAAACTGCAATGAAAACTCTGCCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: RSFIIGLLLSPF*CQNCNENSASP Trigger: AGGACTGGCAGAGTTTTCATTGCAGTTTTGACATCAGAAAGGACTTAATAGCAATCCTATTATAAATGATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR TCA 90 bp | CAAACCTCTCCCCTTCCCATATATCCTCCCCTCCCGTCTTCAAATAGAATGTCCAGAGCCTGGGGCTCATaGTGGTGGTGTAATGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: QTSPLPIYPPLPSSNRMSRAWGS*WWCNEG Trigger: CCCTTCATTACACCACCATCATGAGCCCCAGGCTCT...GGACATTCTATTTGAAGACGGGAGGGGAGGATATATGGGAAGGGGAGAGGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CAA 72 bp | CAGGCCTTGGGTCTTCCCCTTGAGCTGGATCCCAATTaGGGCTTGTCACTGAACTTCTTTTCTCTCTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QALGLPLELDPN*GLSLNFFSLLL Trigger: GAGCAAGAGAGAAAAGAAGTTCAGTGACAAGCCCAAATTGGGATCCAGCTCAAGGGGAAGACCCAAGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR TCA 90 bp | CAAACCTCTCCCCTTCCCATATATCCTCCCCTCCCGTCTTCAAATAGAATGTCCGGAGGAACTGGGAGATaGCAGTTTTGTTCCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QTSPLPIYPPLPSSNRMSGGTGR*QFCSFL Trigger: CAGAAAGGAACAAAACTGTCATCTCCCAGTTCCTCC...GGACATTCTATTTGAAGACGGGAGGGGAGGATATATGGGAAGGGGAGAGGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR CCA 90 bp | AAAGTGCCCTCTTTTCCTGTGACTTCAACTAGCAGGCTGGGAGTTAGAGCTACACCCAGGAGGAGGAACTaGGAGATGACAGTTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KVPSFPVTSTSRLGVRATPRRRN*EMTVLF Trigger: GAACAAAACTGTCATCTCCCAGTTCCTCCTCCTGGG...TGTAGCTCTAACTCCCAGCCTGCTAGTTGAAGTCACAGGAAAAGAGGGCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CAA 72 bp | TTGGGTCTTCCCCTTGAGCTGGATCCCAATTTGGGCTaGTCACTGAACTTCTTTTCTCTCTTGCTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LGLPLELDPNLG*SLNFFSLLLFS Trigger: GGAGAAGAGCAAGAGAGAAAAGAAGTTCAGTGACAAGCCCAAATTGGGATCCAGCTCAAGGGGAAGACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CAA 72 bp | AGTTTCTGTCCCCTGGTTGGGTGTAAATATCTGCATTaGACTCTTCCAGCTGCTTGTTGGGCCTTTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SFCPLVGCKYLH*TLPAACWAFWR Trigger: CCTCCAAAAGGCCCAACAAGCAGCTGGAAGAGTCAAATGCAGATATTTACACCCAACCAGGGGACAGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR TCA 90 bp | TCTTTAATTTCTTTTTACAGAGAAGGCTTCACCGGCCTCCCAGTTTGTCCCCCAGCAACTTGGGCATTGTaGCAGAGGAGAAACAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLISFYREGFTGLPVCPPATWAL*QRRNKG Trigger: ACCTTTGTTTCTCCTCTGTCACAATGCCCAAGTTGC...TGGGGGACAAACTGGGAGGCCGGTGAAGCCTTCTCTGTAAAAAGAAATTAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR CCA 90 bp | AAAGTGCCCTCTTTTCCTGTGACTTCAACTAGCAGGCTGGGAGTTAGAGCTACATGCATAGGGAATCGATaGAACTTGGCTCTGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: KVPSFPVTSTSRLGVRATCIGNR*NLALHV Trigger: AACATGCAGAGCCAAGTTCCATCGATTCCCTATGCA...TGTAGCTCTAACTCCCAGCCTGCTAGTTGAAGTCACAGGAAAAGAGGGCACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR TCA 90 bp | TCTTTAATTTCTTTTTACAGAGAAGGCTTCACCGGCCTCCCAGTTTGTCCCCCAATTGTCCTCACAGAATaGCAATCTGGCCATAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLISFYREGFTGLPVCPPIVLTE*QSGHKQ Trigger: CTGCTTATGGCCAGATTGTCATTCTGTGAGGACAAT...TGGGGGACAAACTGGGAGGCCGGTGAAGCCTTCTCTGTAAAAAGAAATTAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR GCA 90 bp | ACTACAGTTTTCTCATCACAGAGGAACTCCAACAAGCAGGTCAGCTACCACAGCGGACATGGTAATGAGTaGAAATGGAAGGACAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TTVFSSQRNSNKQVSYHSGHGNE*KWKDKK Trigger: TTTCTTGTCCTTCCATTTGCACTCATTACCATGTCC...GCTGTGGTAGCTGACCTGCTTGTTGGAGTTCCTCTGTGATGAGAAAACTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR CCA 90 bp | CTTGTTGGTGGCTCAGTGTCTGAGATATCCTGGGGGTGCAGTTTAGTTGAGATTGGTAATGAGTGCAAATaGAAGGACAAGAAAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: LVGGSVSEISWGCSLVEIGNECK*KDKKDA Trigger: AGCATCTTTCTTGTCCTTCCATTTGCACTCATTACC...AATCTCAACTAAACTGCACCCCCAGGATATCTCAGACACTGAGCCACCAACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR GCA 90 bp | TTTTACTACGAGGTGCTAAACACCAGAGACTACAGTTTTCTCATCACAGAGGAAAAAGAAGTATATTTGTaGCAGGCAACCTGCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: FYYEVLNTRDYSFLITEEKEVYL*QATCIG Trigger: CCCTATGCAGGTTGCCTGGCACAAATATACTTCTTT...TTCCTCTGTGATGAGAAAACTGTAGTCTCTGGTGTTTAGCACCTCGTAGTAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| 3UTR CAA 72 bp | AAAGCCAGGCAGATAGGAAGTTCAAGAGTTTGGATATaGCTGCTATTGAGTAAATTACAAGTACAACTTAGA | + |
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Preference number: 4 (lower is better) Translates to: KARQIGSSRVWI*LLLSKLQVQLR Trigger: TCTAAGTTGTACTTGTAATTTACTCAATAGCAGCAATATCCAAACTCTTGAACTTCCTATCTGCCTGGCTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS-3UTR CAA 90 bp | CAGCTGGGGTATGCTGCCTTGTTGGTGGCTCAGTGTCTGAGATATCCTGGGGGTCAGAAAGAAGTATATTaGTGCCAGGCAACCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: QLGYAALLVAQCLRYPGGQKEVY*CQATCI Trigger: TATGCAGGTTGCCTGGCACAAATATACTTCTTTCTG...ACCCCCAGGATATCTCAGACACTGAGCCACCAACAAGGCAGCATACCCCAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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| CDS CCA 72 bp | CACAATTCTTACATAGGACATGGTAATGAGTGCAAATaGAAGGACAAGAAAGATGCTGGCCACAATAAATAT | + |
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Preference number: 6 (lower is better) Translates to: HNSYIGHGNECK*KDKKDAGHNKY Trigger: ATATTTATTGTGGCCAGCATCTTTCTTGTCCTTCCATTTGCACTCATTACCATGTCCTATGTAAGAATTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120303.9 |
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