Pregenerated sensors for OLFML3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027848Ensembl transcript IDs: ENSMUST00000029440.10, ENSMUST00000169286.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCTCCACAGAGAATCCCCTCCTCCACAGCCCTCCGATATGCCCTaGGTTGCAGCCAGATGTTCCGTGGGCAGACCCCTCTATGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GLHRESPPPQPSDMP*VAARCSVGRPLYGL Trigger: CAGCCCATAGAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGATTCTCTGTGGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | GAGAAGTTCCCGAGGGAGCTAAAGGAGGCCAGCCCAGCCCAGCCGTaGCTAAGGAGCAGAGACTGGGGCAGGAGGAAGAAGGCAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: EKFPRELKEASPAQP*LRSRDWGRRKKAEP Trigger: TGGCTCTGCCTTCTTCCTCCTGCCCCAGTCTCTGCTCCTTAGCCACGGCTGGGCTGGGCTGGCCTCCTTTAGCTCCCTCGGGAACTTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR TCA 90 bp | GAAGCCCTGGCTCTGGCTGGGCTCCAGTGTCCAGCAGTCAGAGGCTaGGTGCCATTGCTGGTTCTCTGCGGCTGCTGTGGAGCACATGAG | + |
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Preference number: 1 (lower is better) Translates to: EALALAGLQCPAVRG*VPLLVLCGCCGAHE Trigger: CTCATGTGCTCCACAGCAGCCGCAGAGAACCAGCAATGGCACTCAGCCTCTGACTGCTGGACACTGGAGCCCAGCCAGAGCCAGGGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | ACGCTGTGGCAGCAGGAAAATCGGAGCGGCTCAGACCAAGGATTGTaGAACCCAGACCCAGGAAGCCCCAGTGCTGGAGGTGGGAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TLWQQENRSGSDQGL*NPDPGSPSAGGGSG Trigger: CCCACTCCCACCTCCAGCACTGGGGCTTCCTGGGTCTGGGTTGCACAATCCTTGGTCTGAGCCGCTCCGATTTTCCTGCTGCCACAGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | CCACAGAGAATCCCCTCCTCCACAGCCCTCCGATATGCCCTGCGTTaGAGCCAGATGTTCCGTGGGCAGACCCCTCTATGGGCTGACAGG | + |
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Preference number: 1 (lower is better) Translates to: PQRIPSSTALRYALR*SQMFRGQTPLWADR Trigger: CCTGTCAGCCCATAGAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGATTCTCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | CTCAAGGCCTCCACAGAGAATCCCCTCCTCCACAGCCCTCCGATATaGCCTGCGTTGCAGCCAGATGTTCCGTGGGCAGACCCCTCTATG | + |
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Preference number: 1 (lower is better) Translates to: LKASTENPLLHSPPI*PALQPDVPWADPSM Trigger: CATAGAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGATTCTCTGTGGAGGCCTTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | TGGGATGGTCACTGCCCCTCCTCCCTGCCCAAACCGCAGACGCTGTaGCAGCAGGAAAATCGGAGCGGCTCAGACCAAGGATTGTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: WDGHCPSSLPKPQTL*QQENRSGSDQGLCN Trigger: GTTGCACAATCCTTGGTCTGAGCCGCTCCGATTTTCCTGCTGCCACAGCGTCTGCGGTTTGGGCAGGGAGGAGGGGCAGTGACCATCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR TCA 90 bp | GAAAGTTTGGGGGCCTGGAGTGGGGTGAGAAGGTCCTCTCAACCCTaGCTTCTGCCGGCAGAGCACAGCTGGAGGACAGTATCTCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ESLGAWSGVRRSSQP*LLPAEHSWRTVSPE Trigger: CTCTGGAGATACTGTCCTCCAGCTGTGCTCTGCCGGCAGAAGTCAGGGTTGAGAGGACCTTCTCACCCCACTCCAGGCCCCCAAACTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | CAGCCGCACAGCCATGCAGAGAGATGTGCACACGCACATTACACATaGACACAGCGCCACAGCGCCACTCTACACCTTGTCATCCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: QPHSHAERCAHAHYT*TQRHSATLHLVIPW Trigger: CCAGGGGATGACAAGGTGTAGAGTGGCGCTGTGGCGCTGTGTGCATGTGTAATGTGCGTGTGCACATCTCTCTGCATGGCTGTGCGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | CCAGTCTCACACAGGTGCTCAGCCGCACAGCCATGCAGAGAGATGTaGACACGCACATTACACATGCACACAGCGCCACAGCGCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: PVSHRCSAAQPCREM*TRTLHMHTAPQRHS Trigger: AGAGTGGCGCTGTGGCGCTGTGTGCATGTGTAATGTGCGTGTGCACATCTCTCTGCATGGCTGTGCGGCTGAGCACCTGTGTGAGACTGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | TCCCTGGGTAGCCCAGTCTCACACAGGTGCTCAGCCGCACAGCCATaGAGAGAGATGTGCACACGCACATTACACATGCACACAGCGCCA | + |
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Preference number: 1 (lower is better) Translates to: SLGSPVSHRCSAAQP*REMCTRTLHMHTAP Trigger: TGGCGCTGTGTGCATGTGTAATGTGCGTGTGCACATCTCTCTGCATGGCTGTGCGGCTGAGCACCTGTGTGAGACTGGGCTACCCAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | AGTAGGGATGTGTTTGTTGGGGAGCTGGTGAGACAGACCAACATCTaGGATGGTCACTGCCCCTCCTCCCTGCCCAAACCGCAGACGCTG | + |
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Preference number: 1 (lower is better) Translates to: SRDVFVGELVRQTNI*DGHCPSSLPKPQTL Trigger: CAGCGTCTGCGGTTTGGGCAGGGAGGAGGGGCAGTGACCATCCCAGATGTTGGTCTGTCTCACCAGCTCCCCAACAAACACATCCCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR TCA 90 bp | CCTGCGTTGCAGCCAGATGTTCCGTGGGCAGACCCCTCTATGGGCTaGCAGGCGGTGATTACTGTTGCCAGCCCCACATTAGGAGAGAAT | + |
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Preference number: 1 (lower is better) Translates to: PALQPDVPWADPSMG*QAVITVASPTLGEN Trigger: ATTCTCTCCTAATGTGGGGCTGGCAACAGTAATCACCGCCTGTCAGCCCATAGAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | TCTGGTTCAAAATCCACCAAGAGGTGGAATGGGAAGCCCTGGCTCTaGCTGGGCTCCAGTGTCCAGCAGTCAGAGGCTGAGTGCCATTGC | + |
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Preference number: 1 (lower is better) Translates to: SGSKSTKRWNGKPWL*LGSSVQQSEAECHC Trigger: GCAATGGCACTCAGCCTCTGACTGCTGGACACTGGAGCCCAGCCAGAGCCAGGGCTTCCCATTCCACCTCTTGGTGGATTTTGAACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | CCCAGCACCCACATGACACTCACAACCATCTGTATTTGCAGTTCCTaGGGTCCAACACCCTCTTCTGGTCTCTGTGGGCACCAGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PSTHMTLTTICICSS*GPTPSSGLCGHQAC Trigger: GCAGGCCTGGTGCCCACAGAGACCAGAAGAGGGTGTTGGACCCCAGGAACTGCAAATACAGATGGTTGTGAGTGTCATGTGGGTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR TCA 90 bp | AGCAGAGACTGGGGCAGGAGGAAGAAGGCAGAGCCACGAGAACTCTaGTCAGAGGGCTACCCCAAACACACCAGAGAGGAATGGTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: SRDWGRRKKAEPREL*SEGYPKHTREEWWV Trigger: AACCCACCATTCCTCTCTGGTGTGTTTGGGGTAGCCCTCTGATCAGAGTTCTCGTGGCTCTGCCTTCTTCCTCCTGCCCCAGTCTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | AAAAGTGAACTCATGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTaGAGCAGCAAAGGACGTGGCATCCTCTCCCAGGCTGCTGGCACC | + |
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Preference number: 1 (lower is better) Translates to: KSELMCGRELTSLGS*SSKGRGILSQAAGT Trigger: GGTGCCAGCAGCCTGGGAGAGGATGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGTTCACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | TCACTTTCTGGTTCAAAATCCACCAAGAGGTGGAATGGGAAGCCCTaGCTCTGGCTGGGCTCCAGTGTCCAGCAGTCAGAGGCTGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: SLSGSKSTKRWNGKP*LWLGSSVQQSEAEC Trigger: GCACTCAGCCTCTGACTGCTGGACACTGGAGCCCAGCCAGAGCCAGGGCTTCCCATTCCACCTCTTGGTGGATTTTGAACCAGAAAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | CCAGGCTGCTGGCACCAAGAAGATTCCAACCAGATAAACAGGTCTTaGCCTCCAGCTGAAGAAAGGGCAGGCTTACGGAGAGCATGCCGT | + |
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Preference number: 1 (lower is better) Translates to: PGCWHQEDSNQINRS*PPAEERAGLRRACR Trigger: ACGGCATGCTCTCCGTAAGCCTGCCCTTTCTTCAGCTGGAGGGCAAGACCTGTTTATCTGGTTGGAATCTTCTTGGTGCCAGCAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | GACCTGGGAAGGGACATCGTGCAGAGACCAGCAGGTTCCCAGAGATaGAATCCAAAGCCTCTTGCTCTTCCAATCCTTCCTGGATTGCCC | + |
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Preference number: 1 (lower is better) Translates to: DLGRDIVQRPAGSQR*NPKPLALPILPGLP Trigger: GGGCAATCCAGGAAGGATTGGAAGAGCAAGAGGCTTTGGATTCCATCTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | TGTCTGGAAGTTGACCCTGGAGATGAGACCTGGGAAGGGACATCGTaGAGAGACCAGCAGGTTCCCAGAGATGGAATCCAAAGCCTCTTG | + |
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Preference number: 1 (lower is better) Translates to: CLEVDPGDETWEGTS*RDQQVPRDGIQSLL Trigger: CAAGAGGCTTTGGATTCCATCTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAGGGTCAACTTCCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | AGACAGACAAAAGGAGGAGTGTTGACTGATCCACCCCATCCTGGGTaGAAGGAGGGAGGGTTCTACTTGGGAGAGAAGGCTGTGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: RQTKGGVLTDPPHPG*KEGGFYLGEKAVFL Trigger: CAGGAACACAGCCTTCTCTCCCAAGTAGAACCCTCCCTCCTTCCACCCAGGATGGGGTGGATCAGTCAACACTCCTCCTTTTGTCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | CCTGGAAAATCTGAGGCTGAAGGAGGAAGCCAGGGAAAGGGCTCTTaGTTCCTGACTAGCTCAGGTGTATCACAGAGGAAACCGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: PGKSEAEGGSQGKGS*FLTSSGVSQRKPGQ Trigger: CTGTCCCGGTTTCCTCTGTGATACACCTGAGCTAGTCAGGAACCAAGAGCCCTTTCCCTGGCTTCCTCCTTCAGCCTCAGATTTTCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR TCA 90 bp | AATCTGAGGCTGAAGGAGGAAGCCAGGGAAAGGGCTCTTGGTTCCTaGCTAGCTCAGGTGTATCACAGAGGAAACCGGGACAGAGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: NLRLKEEARERALGS*LAQVYHRGNRDRAD Trigger: ATCAGCTCTGTCCCGGTTTCCTCTGTGATACACCTGAGCTAGTCAGGAACCAAGAGCCCTTTCCCTGGCTTCCTCCTTCAGCCTCAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | TCAGCTAGCCTTATTTGTCTGGAAGTTGACCCTGGAGATGAGACCTaGGAAGGGACATCGTGCAGAGACCAGCAGGTTCCCAGAGATGGA | + |
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Preference number: 1 (lower is better) Translates to: SASLICLEVDPGDET*EGTSCRDQQVPRDG Trigger: TCCATCTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAGGGTCAACTTCCAGACAAATAAGGCTAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR TCA 90 bp | TCGGTCATACTGAGGGCAAGAATGCTGTCGCCTGCTGTCTGGGGTTaGCCCTCTCCAAAGGACAGGGCTCTGAGTTTGGAACTAAACTTT | + |
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Preference number: 1 (lower is better) Translates to: SVILRARMLSPAVWG*PSPKDRALSLELNF Trigger: AAAGTTTAGTTCCAAACTCAGAGCCCTGTCCTTTGGAGAGGGTCAACCCCAGACAGCAGGCGACAGCATTCTTGCCCTCAGTATGACCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CCA 90 bp | CTGTATTTGCAGTTCCTGGGGTCCAACACCCTCTTCTGGTCTCTGTaGGCACCAGGCCTGCACAGCATACATCTAGACAAAACCATCCAT | + |
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Preference number: 1 (lower is better) Translates to: LYLQFLGSNTLFWSL*APGLHSIHLDKTIH Trigger: ATGGATGGTTTTGTCTAGATGTATGCTGTGCAGGCCTGGTGCCCACAGAGACCAGAAGAGGGTGTTGGACCCCAGGAACTGCAAATACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR GCA 90 bp | CTGGCAAGCTGGGGCTGGGAGTCCTTCCCTGTTCCTTTCTCCCTCTaGTGCCCTTTAGTTGATACACACCGGAATCTATGTTTTCATTCT | + |
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Preference number: 1 (lower is better) Translates to: LASWGWESFPVPFSL*CPLVDTHRNLCFHS Trigger: AGAATGAAAACATAGATTCCGGTGTGTATCAACTAAAGGGCAGCAGAGGGAGAAAGGAACAGGGAAGGACTCCCAGCCCCAGCTTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029440.10 ENSMUST00000169286.2 |
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| 3UTR GCA 90 bp | GCAAGCTGGGGCTGGGAGTCCTTCCCTGTTCCTTTCTCCCTCTGCTaGCCTTTAGTTGATACACACCGGAATCTATGTTTTCATTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: ASWGWESFPVPFSLC*PLVDTHRNLCFHSS Trigger: AGAAGAATGAAAACATAGATTCCGGTGTGTATCAACTAAAGGGCAGCAGAGGGAGAAAGGAACAGGGAAGGACTCCCAGCCCCAGCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029440.10 ENSMUST00000169286.2 |
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| 3UTR GCA 90 bp | TGCCTTTCTTTCCTCTTCCTTACCAACCTACGTCAGGAGCAGCTCTaGCTGTGGAGAGAAGAAAGACAGACAAAAGGAGGAGTGTTGACT | + |
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Preference number: 1 (lower is better) Translates to: CLSFLFLTNLRQEQL*LWREERQTKGGVLT Trigger: AGTCAACACTCCTCCTTTTGTCTGTCTTTCTTCTCTCCACAGGCAGAGCTGCTCCTGACGTAGGTTGGTAAGGAAGAGGAAAGAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CAA 90 bp | CAGACGCTGTGGCAGCAGGAAAATCGGAGCGGCTCAGACCAAGGATaGTGCAACCCAGACCCAGGAAGCCCCAGTGCTGGAGGTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QTLWQQENRSGSDQG*CNPDPGSPSAGGGS Trigger: ACTCCCACCTCCAGCACTGGGGCTTCCTGGGTCTGGGTTGCACAATCCTTGGTCTGAGCCGCTCCGATTTTCCTGCTGCCACAGCGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGATGAGACCTGGGAAGGGACATCGTGCAGAGACCAGCAGGTTCCCAGAGTCCAGTTTCCAGGGCTaGGGTGGGAGGGTGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LEMRPGKGHRAETSRFPESSFQG*GGRVHS Trigger: GCTGTGCACCCTCCCACCCCAGCCCTGGAAACTGGA...CTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGTGGCATTTCCAGGGCTGGGGTaGGAGGGTGCACAGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: CVGESLPVLAAAAAKDVAFPGLG*EGAQLR Trigger: CCTCAGCTGTGCACCCTCCCACCCCAGCCCTGGAAA...TGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR GCA 90 bp | GACAGTGAGACAGAAAGTTTGGGGGCCTGGAGTGGGGTGAGAAGGTCCTCTCAATGGGAAGGGACATCGTaGAGAGACCAGCAGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: DSETESLGAWSGVRRSSQWEGTS*RDQQVP Trigger: GGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCA...TTGAGAGGACCTTCTCACCCCACTCCAGGCCCCCAAACTTTCTGTCTCACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGTGGCAACATTAGGAGAGAATTaGATGGGAGAGGGCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: CVGESLPVLAAAAAKDVATLGEN*MGEGPH Trigger: GTGGGGGCCCTCTCCCATTCAATTCTCTCCTAATGT...TGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGTGGCAGGCGGTGATTACTGTTaGCAGCCCCACATTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: CVGESLPVLAAAAAKDVAGGDYC*QPHIRR Trigger: TCTCCTAATGTGGGGCTGGCAACAGTAATCACCGCC...TGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGATGAGACCTGGGAAGGGACATCGTGCAGAGACCAGCAGGTTCCCAGAGGAATCCAAAGCCTCTTaGTCTTCCAATCCTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LEMRPGKGHRAETSRFPEESKAS*SSNPSW Trigger: CCAGGAAGGATTGGAAGAGCAAGAGGCTTTGGATTC...CTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR CCA 90 bp | ACTCATGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGGCACTTCATTTTCCCTaGCAGGCACCAAGGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: THVWERAYQSWQLQQQRTALHFP*QAPRRQ Trigger: TTGCCTCCTTGGTGCCTGCCAGGGAAAATGAAGTGC...CGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CAA 90 bp | ACAAAGAGAAAAGTGAACTCATGTGTGGGAGAGAGCTTACCAGTCTaGGCAGCTGCAGCAGCAAAGGACGTGGCATCCTCTCCCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TKRKVNSCVGESLPV*AAAAAKDVASSPRL Trigger: CAGCCTGGGAGAGGATGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGTTCACTTTTCTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCTAGGCACGCAGCCACACTGGGAAGGGGGCAAGCTACTGCCATGTGCTCATGACATAAGGCAGGAGTaGAGATTTAGGGTGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: PLGTQPHWEGGKLLPCAHDIRQE*RFRVFV Trigger: AACAAACACCCTAAATCTTCACTCCTGCCTTATGTC...ATGAGCACATGGCAGTAGCTTGCCCCCTTCCCAGTGTGGCTGCGTGCCTAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CAA 90 bp | CCCCCACTGACTTTTATCCATCAGCTAGCCTTATTTGTCTGGAAGTaGACCCTGGAGATGAGACCTGGGAAGGGACATCGTGCAGAGACC | + |
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Preference number: 2 (lower is better) Translates to: PPLTFIHQLALFVWK*TLEMRPGKGHRAET Trigger: GGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAGGGTCAACTTCCAGACAAATAAGGCTAGCTGATGGATAAAAGTCAGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR CAA 90 bp | GTGGATGTCCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTaGTGGGCTTTCAACTCACTCTCCTCCAGTAGGGTCTGGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VDVLWPAIGGKCGIS*WAFNSLSSSRVWVS Trigger: GGAAACCCAGACCCTACTGGAGGAGAGTGAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGGACATCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTGGGCTTTCAACTCTTGTTGGGGAGCTGGTaGGACAGACCAACATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLACNWGKMWNFFVGFQLLLGSW*DRPTSG Trigger: CCCAGATGTTGGTCTGTCTCACCAGCTCCCCAACAA...GAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR GCA 90 bp | TTAATGATGGGATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCACAATCCTTCCTGGATTaGCCCCCTGAAGTCGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LMMGFSCQDCLLEQQIVSQSFLD*PPEVGC Trigger: GCACCCGACTTCAGGGGGGCAATCCAGGAAGGATTG...TGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATCCCATCATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTGGGCTTTCAACTCAAACCGCAGACGCTGTaGCAGCAGGAAAATCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PLACNWGKMWNFFVGFQLKPQTL*QQENRS Trigger: GCTCCGATTTTCCTGCTGCCACAGCGTCTGCGGTTT...GAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR CCA 90 bp | TTAATGATGGGATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCAGTCCCCCTTCCTCCCTaGGTGATAATCCAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LMMGFSCQDCLLEQQIVSVPLPP*VIIQKG Trigger: GCCCTTCTGGATTATCACCCAGGGAGGAAGGGGGAC...TGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATCCCATCATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| 3UTR-3UTR GCA 90 bp | TTAATGATGGGATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCAAAGAATGCTGTCGCCTaGTGTCTGGGGTTGACCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LMMGFSCQDCLLEQQIVSKNAVA*CLGLTL Trigger: GAGGGTCAACCCCAGACAGCAGGCGACAGCATTCTT...TGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATCCCATCATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGTGGCACCAGGCTGTAGACAATaGAGCCATTTATTAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: CVGESLPVLAAAAAKDVAPGCRQ*SHLLKT Trigger: TGTCTTTAATAAATGGCTGCATTGTCTACAGCCTGG...TGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR CCA 90 bp | TTAATGATGGGATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCAAAATCCACCAAGAGGTaGAATGGGAAGCCCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LMMGFSCQDCLLEQQIVSKSTKR*NGKPWL Trigger: GAGCCAGGGCTTCCCATTCCACCTCTTGGTGGATTT...TGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATCCCATCATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR CCA 90 bp | CTATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTAATTGGGGGAAAATGTaGAATTTCTTTGTGGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LFSERQMFKGVDPRGPGTNWGKM*NFFVGF Trigger: AAAGCCCACAAAGAAATTCCACATTTTCCCCCAATT...AGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 90 bp | GATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCATTaGATGAATTTGGACAGTTCACGACATCTACCCACACAGCACCTC | + |
|
Preference number: 2 (lower is better) Translates to: DSAAKTVSLSSRSFH*MNLDSSRHLPTQHL Trigger: GAGGTGCTGTGTGGGTAGATGTCGTGAACTGTCCAAATTCATCAAATGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR TCA 90 bp | TTAATGATGGGATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCACTTCGTTTTGAAGGATaGACTGCAGGAGAGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LMMGFSCQDCLLEQQIVSLRFEG*TAGELT Trigger: TGTGAGCTCTCCTGCAGTTCATCCTTCAAAACGAAG...TGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATCCCATCATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTTGTTCAGTTCTAAAATaGTACCCAGGATCTGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KENLTCPFLSITAVVRKSCSVLK*YPGSGV Trigger: AACTCCAGATCCTGGGTAGCATTTTAGAACTGAACA...AGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 90 bp | CCTTTAGAAATTAGGGTATATGAGCTACCACCACTGGCCTTCGTTTaGAAGGATGAACTGCAGGAGAGCTCACAGGAATATAAATGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PLEIRVYELPPLAFV*KDELQESSQEYKCL Trigger: CAGACATTTATATTCCTGTGAGCTCTCCTGCAGTTCATCCTTCAAAACGAAGGCCAGTGGTGGTAGCTCATATACCCTAATTTCTAAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTTTTAGGGTGTTTGTTTaGTGTTCAGTTCTAAAATGC | + |
|
Preference number: 2 (lower is better) Translates to: KENLTCPFLSITAVVRKSFRVFV*CSVLKC Trigger: GCATTTTAGAACTGAACAGCAAACAAACACCCTAAA...AGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | GCCAGCCCAGCCCAGCCGTGGCTAAGGAGCAGAGACTaGGGCAGGAGGAAGAAGGCAGAGCCACGAGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ASPAQPWLRSRD*GRRKKAEPREL Trigger: GAGTTCTCGTGGCTCTGCCTTCTTCCTCCTGCCCCAGTCTCTGCTCCTTAGCCACGGCTGGGCTGGGCTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | GGGGCCTGGAGTGGGGTGAGAAGGTCCTCTCAACCCTaGCTTCTGCCGGCAGAGCACAGCTGGAGGACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GAWSGVRRSSQP*LLPAEHSWRTV Trigger: TACTGTCCTCCAGCTGTGCTCTGCCGGCAGAAGTCAGGGTTGAGAGGACCTTCTCACCCCACTCCAGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | ATCCCCTCCTCCACAGCCCTCCGATATGCCCTGCGTTaGAGCCAGATGTTCCGTGGGCAGACCCCTCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: IPSSTALRYALR*SQMFRGQTPLW Trigger: CCATAGAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | AGAGAATCCCCTCCTCCACAGCCCTCCGATATGCCCTaGGTTGCAGCCAGATGTTCCGTGGGCAGACCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RESPPPQPSDMP*VAARCSVGRPL Trigger: GAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGATTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | TCCACAGAGAATCCCCTCCTCCACAGCCCTCCGATATaGCCTGCGTTGCAGCCAGATGTTCCGTGGGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: STENPLLHSPPI*PALQPDVPWAD Trigger: GTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGATTCTCTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | CGTGCAGTCTCCCTGGGTAGCCCAGTCTCACACAGGTaGTCAGCCGCACAGCCATGCAGAGAGATGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: RAVSLGSPVSHR*SAAQPCREMCT Trigger: TGTGCACATCTCTCTGCATGGCTGTGCGGCTGAGCACCTGTGTGAGACTGGGCTACCCAGGGAGACTGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | GTGATTACTGTTGCCAGCCCCACATTAGGAGAGAATTaGATGGGAGAGGGCCCCCACCCGCCTCAGGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VITVASPTLGEN*MGEGPHPPQAP Trigger: GGGAGCCTGAGGCGGGTGGGGGCCCTCTCCCATTCAATTCTCTCCTAATGTGGGGCTGGCAACAGTAATCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | CAGCAGGAAAATCGGAGCGGCTCAGACCAAGGATTGTaGAACCCAGACCCAGGAAGCCCCAGTGCTGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QQENRSGSDQGL*NPDPGSPSAGG Trigger: ACCTCCAGCACTGGGGCTTCCTGGGTCTGGGTTGCACAATCCTTGGTCTGAGCCGCTCCGATTTTCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | AAATCCACCAAGAGGTGGAATGGGAAGCCCTGGCTCTaGCTGGGCTCCAGTGTCCAGCAGTCAGAGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KSTKRWNGKPWL*LGSSVQQSEAE Trigger: CTCAGCCTCTGACTGCTGGACACTGGAGCCCAGCCAGAGCCAGGGCTTCCCATTCCACCTCTTGGTGGATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | CAGCGCCACAGCGCCACTCTACACCTTGTCATCCCCTaGACCTGTTCTCCTCAAGGCCTCCACAGAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: QRHSATLHLVIP*TCSPQGLHRES Trigger: GGATTCTCTGTGGAGGCCTTGAGGAGAACAGGTCCAGGGGATGACAAGGTGTAGAGTGGCGCTGTGGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | CAGCCAGATGTTCCGTGGGCAGACCCCTCTATGGGCTaGCAGGCGGTGATTACTGTTGCCAGCCCCACATTA | + |
|
Preference number: 3 (lower is better) Translates to: QPDVPWADPSMG*QAVITVASPTL Trigger: TAATGTGGGGCTGGCAACAGTAATCACCGCCTGTCAGCCCATAGAGGGGTCTGCCCACGGAACATCTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | CTCATGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTaGAGCAGCAAAGGACGTGGCATCCTCTCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LMCGRELTSLGS*SSKGRGILSQA Trigger: AGCCTGGGAGAGGATGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | GGTTCAAAATCCACCAAGAGGTGGAATGGGAAGCCCTaGCTCTGGCTGGGCTCCAGTGTCCAGCAGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSKSTKRWNGKP*LWLGSSVQQSE Trigger: CTCTGACTGCTGGACACTGGAGCCCAGCCAGAGCCAGGGCTTCCCATTCCACCTCTTGGTGGATTTTGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | CTGAGGGCAAGAATGCTGTCGCCTGCTGTCTGGGGTTaGCCCTCTCCAAAGGACAGGGCTCTGAGTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRARMLSPAVWG*PSPKDRALSLE Trigger: TTCCAAACTCAGAGCCCTGTCCTTTGGAGAGGGTCAACCCCAGACAGCAGGCGACAGCATTCTTGCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | AGCCCAGTCTCACACAGGTGCTCAGCCGCACAGCCATaGAGAGAGATGTGCACACGCACATTACACATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SPVSHRCSAAQP*REMCTRTLHMH Trigger: GTGCATGTGTAATGTGCGTGTGCACATCTCTCTGCATGGCTGTGCGGCTGAGCACCTGTGTGAGACTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | GCAGCCACACTGGGAAGGGGGCAAGCTACTGCCATGTaGTCATACACGTGCAGTTGCAGTCACACAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: AATLGRGQATAM*SYTCSCSHTTH Trigger: GTGTGTTGTGTGACTGCAACTGCACGTGTATGAGCACATGGCAGTAGCTTGCCCCCTTCCCAGTGTGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | GGGAGAGAAGGCTGTGTTCCTGTCCCCCTTCCTCCCTaGGTGATAATCCAGAAGGGCTGCCTGAGGTTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GREGCVPVPLPP*VIIQKGCLRLN Trigger: GTTTAACCTCAGGCAGCCCTTCTGGATTATCACCCAGGGAGGAAGGGGGACAGGAACACAGCCTTCTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | GTTGACCCTGGAGATGAGACCTGGGAAGGGACATCGTaGAGAGACCAGCAGGTTCCCAGAGATGGAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VDPGDETWEGTS*RDQQVPRDGIQ Trigger: TTGGATTCCATCTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAGGGTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | AGCCATGCAGAGAGATGTGCACACGCACATTACACATaGACACAGCGCCACAGCGCCACTCTACACCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SHAERCAHAHYT*TQRHSATLHLV Trigger: GACAAGGTGTAGAGTGGCGCTGTGGCGCTGTGTGCATGTGTAATGTGCGTGTGCACATCTCTCTGCATGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | CTGCAGCAGCAAAGGACGTGGCATCCTCTCCCAGGCTaGTGGCACCAAGAAGATTCCAACCAGATAAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQQQRTWHPLPG*WHQEDSNQINR Trigger: CCTGTTTATCTGGTTGGAATCTTCTTGGTGCCAGCAGCCTGGGAGAGGATGCCACGTCCTTTGCTGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | GTCACTTTCTGGTTCAAAATCCACCAAGAGGTGGAATaGGAAGCCCTGGCTCTGGCTGGGCTCCAGTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VTFWFKIHQEVE*EALALAGLQCP Trigger: TGGACACTGGAGCCCAGCCAGAGCCAGGGCTTCCCATTCCACCTCTTGGTGGATTTTGAACCAGAAAGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | AAAGGAGGAGTGTTGACTGATCCACCCCATCCTGGGTaGAAGGAGGGAGGGTTCTACTTGGGAGAGAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KGGVLTDPPHPG*KEGGFYLGEKA Trigger: AGCCTTCTCTCCCAAGTAGAACCCTCCCTCCTTCCACCCAGGATGGGGTGGATCAGTCAACACTCCTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | GAAGTCTATTCTCAGAGAGGCAAATGTTCAAGGGGGTaGACCCCAGAGGCCCGGGAACTGTTCTGGCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: EVYSQRGKCSRG*TPEARELFWQA Trigger: AGCTTGCCAGAACAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATAGACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029440.10 ENSMUST00000169286.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCATGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGCACATTAGGAGAGAATaGAATGGGAGAGGGCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: THVWERAYQSWQLQQQRTHIRRE*NGRGPP Trigger: TGGGGGCCCTCTCCCATTCAATTCTCTCCTAATGTG...CGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | CTTATTTGTCTGGAAGTTGACCCTGGAGATGAGACCTaGGAAGGGACATCGTGCAGAGACCAGCAGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LICLEVDPGDET*EGTSCRDQQVP Trigger: GGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAGGGTCAACTTCCAGACAAATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTGGTCAGGAAGTCTATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCCACTGGCCTTCGTTTaGAAGGATGAACTGCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: AVVRKSILREANVQGGGPPLAFV*KDELQE Trigger: CTCCTGCAGTTCATCCTTCAAAACGAAGGCCAGTGG...GGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATAGACTTCCTGACCACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | ATCCAAAGCCTCTTGCTCTTCCAATCCTTCCTGGATTaGCCCCCTGAAGTCGGGTGCACATTAGACCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: IQSLLLFQSFLD*PPEVGCTLDQQ Trigger: CTGTTGGTCTAATGTGCACCCGACTTCAGGGGGGCAATCCAGGAAGGATTGGAAGAGCAAGAGGCTTTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | TGGGGCTGGGAGTCCTTCCCTGTTCCTTTCTCCCTCTaGTGCCCTTTAGTTGATACACACCGGAATCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: WGWESFPVPFSL*CPLVDTHRNLC Trigger: ACATAGATTCCGGTGTGTATCAACTAAAGGGCAGCAGAGGGAGAAAGGAACAGGGAAGGACTCCCAGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029440.10 ENSMUST00000169286.2 |
||
| 3UTR CCA 72 bp | AGGGACATCGTGCAGAGACCAGCAGGTTCCCAGAGATaGAATCCAAAGCCTCTTGCTCTTCCAATCCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RDIVQRPAGSQR*NPKPLALPILP Trigger: AGGAAGGATTGGAAGAGCAAGAGGCTTTGGATTCCATCTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | TCTGAGGCTGAAGGAGGAAGCCAGGGAAAGGGCTCTTaGTTCCTGACTAGCTCAGGTGTATCACAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SEAEGGSQGKGS*FLTSSGVSQRK Trigger: TTTCCTCTGTGATACACCTGAGCTAGTCAGGAACCAAGAGCCCTTTCCCTGGCTTCCTCCTTCAGCCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | CACATGACACTCACAACCATCTGTATTTGCAGTTCCTaGGGTCCAACACCCTCTTCTGGTCTCTGTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HMTLTTICICSS*GPTPSSGLCGH Trigger: GTGCCCACAGAGACCAGAAGAGGGTGTTGGACCCCAGGAACTGCAAATACAGATGGTTGTGAGTGTCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | CACATGAGTGTGGAGGGGGAGGCCTTTGTCCAACAGTaGCCCACAGTAAAATGTGTAACTAGAGAAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: HMSVEGEAFVQQ*PTVKCVTREVP Trigger: GGGAACTTCTCTAGTTACACATTTTACTGTGGGGCACTGTTGGACAAAGGCCTCCCCCTCCACACTCATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | TGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTaGGCTTTCAACTCACTCTCCTCCAGTAGGGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WPAIGGKCGISL*AFNSLSSSRVW Trigger: CCAGACCCTACTGGAGGAGAGTGAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | GGTGGATGTCCTCTGGCCTGCAATTGGGGGAAAATGTaGAATTTCTTTGTGGGCTTTCAACTCACTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGCPLACNWGKM*NFFVGFQLTLL Trigger: GAGGAGAGTGAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGGACATCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CCA 72 bp | CCACTGACTTTTATCCATCAGCTAGCCTTATTTGTCTaGAAGTTGACCCTGGAGATGAGACCTGGGAAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLTFIHQLALFV*KLTLEMRPGKG Trigger: TCCCTTCCCAGGTCTCATCTCCAGGGTCAACTTCCAGACAAATAAGGCTAGCTGATGGATAAAAGTCAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | TCTGGCAAACGAAGATGTCACAAGCACACACCTGTTTaGAGGACCCAGGCTGTAGACAATGCAGCCATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SGKRRCHKHTPV*RTQAVDNAAIY Trigger: ATAAATGGCTGCATTGTCTACAGCCTGGGTCCTTCAAACAGGTGTGTGCTTGTGACATCTTCGTTTGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | TTAGGGTATATGAGCTACCACCACTGGCCTTCGTTTTaGAGGATGAACTGCAGGAGAGCTCACAGGAATATA | + |
|
Preference number: 3 (lower is better) Translates to: LGYMSYHHWPSF*RMNCRRAHRNI Trigger: TATATTCCTGTGAGCTCTCCTGCAGTTCATCCTTCAAAACGAAGGCCAGTGGTGGTAGCTCATATACCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR GCA 72 bp | GCACACACCTGTTTGAAGGACCCAGGCTGTAGACAATaGAGCCATTTATTAAAGACACAGCCCATATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: AHTCLKDPGCRQ*SHLLKTQPIYL Trigger: CAAGTATATGGGCTGTGTCTTTAATAAATGGCTGCATTGTCTACAGCCTGGGTCCTTCAAACAGGTGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | TACTTGCCTTTACTGATATTGCTTACATACATCACCTaGGCCAGCCTCATTAGGGGCATCAAAAAGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: YLPLLILLTYIT*ASLIRGIKKAQ Trigger: CTGTGCCTTTTTGATGCCCCTAATGAGGCTGGCTCAGGTGATGTATGTAAGCAATATCAGTAAAGGCAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR TCA 72 bp | AGTTTGGAACTAAACTTTGTGGACATAAGGCAGGAGTaGAGATTTAGGGTGTTTGTTTGCTGTTCAGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLELNFVDIRQE*RFRVFVCCSVL Trigger: TAGAACTGAACAGCAAACAAACACCCTAAATCTTCACTCCTGCCTTATGTCCACAAAGTTTAGTTCCAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGTGGAGCACATGAGTGTGGAGGGGGAGGCCTTTGTCCAACAGTGCCCCTGGTGCTGCTGTCCCTaGAGGGGTCCCGTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAVEHMSVEGEAFVQQCPWCCCP*RGPVHD Trigger: GTCATGGACGGGACCCCTTCAGGGACAGCAGCACCA...GGGGCACTGTTGGACAAAGGCCTCCCCCTCCACACTCATGTGCTCCACAGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTAGGCACGCAGCCACACTGGGAAGGGGGCAAGCTACTGCCATGTGCTCATACACCAGCTGCCCCGTaGCTACCCAGGGGAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGTQPHWEGGKLLPCAHTPAAP*LPRGRA Trigger: TGCCCTTCCCCTGGGTAGGCACGGGGCAGCTGGTGT...ATGAGCACATGGCAGTAGCTTGCCCCCTTCCCAGTGTGGCTGCGTGCCTAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | GTGGACCCCAGAGGCCCGGGAACTGTTCTGGCAAGCTGGGGCTGGGAGTCCTTCGTTCTCTCTGGGACATaGTGTGTCCCACTGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VDPRGPGTVLASWGWESFVLSGT*CVPLLL Trigger: GAGCAGCAGTGGGACACACCATGTCCCAGAGAGAAC...GAAGGACTCCCAGCCCCAGCTTGCCAGAACAGTTCCCGGGCCTCTGGGGTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | ACTCATGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGCCACCGTACACCAGCTaGCCCGTGCCTACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: THVWERAYQSWQLQQQRTPPYTS*PVPTQG Trigger: CCCCTGGGTAGGCACGGGGCAGCTGGTGTACGGTGG...CGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | AATCCCCTCCTCCACAGCCCTCCGATATGCCCTGCGTaGCAGCCAGATGTTCCGTGGGCAGACCCCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: NPLLHSPPICPA*QPDVPWADPSM Trigger: CATAGAGGGGTCTGCCCACGGAACATCTGGCTGCAACGCAGGGCATATCGGAGGGCTGTGGAGGAGGGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTGTTCCTCCCGCTCCTTCTCTaGCACCTCCAGGAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQRGKCSRGWTPEARELFLPLLL*HLQERQ Trigger: TTGCCTCTCCTGGAGGTGGCAGAGAAGGAGCGGGAG...GAACAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | GGTGATTACTGTTGCCAGCCCCACATTAGGAGAGAATaGAATGGGAGAGGGCCCCCACCCGCCTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDYCCQPHIRRE*NGRGPPPASGS Trigger: GGAGCCTGAGGCGGGTGGGGGCCCTCTCCCATTCAATTCTCTCCTAATGTGGGGCTGGCAACAGTAATCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTGTTGCATGCCGACTACTCTaGTCCTGGCATTGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSERQMFKGVDPRGPGTVACRLL*SWHWAS Trigger: GCTGGCCCAATGCCAGGATCAGAGTAGTCGGCATGC...AACAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | CTGGAGATGAGACCTGGGAAGGGACATCGTGCAGAGACCAGCAGGTTCCCAGAGCCTCTGCGTTCTCTCTaGGACATGGTGTGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LEMRPGKGHRAETSRFPEPLRSL*DMVCPT Trigger: AGTGGGACACACCATGTCCCAGAGAGAACGCAGAGG...CTCTGGGAACCTGCTGGTCTCTGCACGATGTCCCTTCCCAGGTCTCATCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTAGGCACGCAGCCACACTGGGAAGGGGGCAAGCTACTGCCATGTGCTCATGGCACCATATCGGCGTaGAAAATAGGAGAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLGTQPHWEGGKLLPCAHGTISA*KIGECC Trigger: GCAGCACTCTCCTATTTTCCACGCCGATATGGTGCC...ATGAGCACATGGCAGTAGCTTGCCCCCTTCCCAGTGTGGCTGCGTGCCTAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | TATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTGTCCAACACCCTCTTCTaGTCTCTGTGGGCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSQRGKCSRGWTPEARELSNTLF*SLWAPG Trigger: GCCTGGTGCCCACAGAGACCAGAAGAGGGTGTTGGA...CAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169286.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTGTTTGTTGGGGAGCTGGTGAGACAGACCAACATCTGGGATGGTCACTGCAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GCVCWGAGETDQHLGWSLQPWQG*SHAALG Trigger: TCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTG...CAGTGACCATCCCAGATGTTGGTCTGTCTCACCAGCTCCCCAACAAACACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | ACTCATGTGTGGGAGAGAGCTTACCAGTCTTGGCAGCTGCAGCAGCAAAGGACGAGTCTGCTTCAGTTCTaGGGGTCTCCCGCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THVWERAYQSWQLQQQRTSLLQF*GSPAPS Trigger: AGAAGGAGCGGGAGACCCTCAGAACTGAAGCAGACT...CGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | TCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTGTTCTTCCCAGCACCCACATaGCACTCACAACCATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQRGKCSRGWTPEARELFFPAPT*HSQPSV Trigger: TACAGATGGTTGTGAGTGTCATGTGGGTGCTGGGAA...GAACAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169286.2 |
||
| CDS-3UTR TCA 90 bp | GACAGTGAGACAGAAAGTTTGGGGGCCTGGAGTGGGGTGAGAAGGTCCTCTCAAAAGGGGTCCCGTCCATaGCAAAAAGAAGAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSETESLGAWSGVRRSSQKGSRP*QKEEEQ Trigger: CTGCTCCTCTTCTTTTTGTCATGGACGGGACCCCTT...TTGAGAGGACCTTCTCACCCCACTCCAGGCCCCCAAACTTTCTGTCTCACTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | GCTGTGGTCAGGAAGTCTATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCACGTAGATCTTCTCTaGTGGCCCCAGCGGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVVRKSILREANVQGGGPHVDLL*WPQRIL Trigger: AAGGATCCGCTGGGGCCAGCAGAGAAGATCTACGTG...GGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATAGACTTCCTGACCACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | GGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATACAGGGTCCCACAGATaGCAAACGCAGCCTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GESDLSLPEHHSCGQEVYTGSHR*QTQPLR Trigger: ACGCAGAGGCTGCGTTTGTCATCTGTGGGACCCTGT...ATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | GGATGTGTTTGTTGGGGAGCTGGTGAGACAGACCAACATCTGGGATGGTCACTGGCATCGAAGGAACACTaGATACGAGCCCTACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCVCWGAGETDQHLGWSLASKEH*IRALLA Trigger: TGCCAGTAGGGCTCGTATTCAGTGTTCCTTCGATGC...CAGTGACCATCCCAGATGTTGGTCTGTCTCACCAGCTCCCCAACAAACACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | GTCAGGAAGTCTATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGGGTGTGTCCCACTGCTaGTCTGTGTCAAGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VRKSILREANVQGGGPQRGVSHC*SVSSVC Trigger: ACAGACACTTGACACAGAGCAGCAGTGGGACACACC...CCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATAGACTTCCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | GGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATTTCGGCCCTTGCCTTTaGCTCCAGGACCTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GESDLSLPEHHSCGQEVYFGPCL*LQDLQS Trigger: TGACTGGAGGTCCTGGAGCCAAAGGCAAGGGCCGAA...ATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | AAAGTGAACTCATGTGTGGGAGAGAGCTTACCAGTCTaGGCAGCTGCAGCAGCAAAGGACGTGGCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KVNSCVGESLPV*AAAAAKDVASS Trigger: AGAGGATGCCACGTCCTTTGCTGCTGCAGCTGCCAAGACTGGTAAGCTCTCTCCCACACATGAGTTCACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | TCCCAGCACCCACATGACACTCACAACCATCTGTATTaGCAGTTCCTGGGGTCCAACACCCTCTTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQHPHDTHNHLY*QFLGSNTLFWS Trigger: AGACCAGAAGAGGGTGTTGGACCCCAGGAACTGCAAATACAGATGGTTGTGAGTGTCATGTGGGTGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | AATCGGAGCGGCTCAGACCAAGGATTGTGCAACCCAGACCCAGGAAGCCCCAGTTTGCCAAGTGAAATTTaGTCAGCTGCAGAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRSGSDQGLCNPDPGSPSLPSEI*SAAECS Trigger: AGAACACTCTGCAGCTGATCAAATTTCACTTGGCAA...ACTGGGGCTTCCTGGGTCTGGGTTGCACAATCCTTGGTCTGAGCCGCTCCGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | TCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATTCTCAGCTCTGCAGGGAACACTaGGCTATCCACCACTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SDLSLPEHHSCGQEVYSQLCREH*AIHHCS Trigger: CGAACAGTGGTGGATAGCTCAGTGTTCCCTGCAGAG...CTGAGAATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | TGTGGTCAGGAAGTCTATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCACCGTGTCGTTCTGGGTaGCGTCTAACACGTAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: CGQEVYSQRGKCSRGWTPPCRSG*RLTRRS Trigger: AGATCTACGTGTTAGACGGCACCCAGAACGACACGG...TGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAATAGACTTCCTGACCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | TCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATTCTCAGGTAGATCTTCTCTGCTaGCCCCAGCGGATCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLSLPEHHSCGQEVYSQVDLLC*PQRILG Trigger: ACCAAGGATCCGCTGGGGCCAGCAGAGAAGATCTAC...CTGAGAATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | AAGGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTACGGTCCACTCTTCCTaGGATGGAGTCTGCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KENLTCPFLSITAVVRKSTVHSS*DGVCFS Trigger: ACTGAAGCAGACTCCATCTCAGGAAGAGTGGACCGT...AGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | CCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTGGGCTTTCAACTCGACAAACGCAGCCTCTaGGTTCTCTCTGGGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: PLACNWGKMWNFFVGFQLDKRSL*VLSGTW Trigger: CCATGTCCCAGAGAGAACGCAGAGGCTGCGTTTGTC...GAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTGTGGTCAGGAAGTCTATTCTCAGAGAGGCAAATGTTCAAGGGGGTGGAAGTCACGCAGCCTTaGGAAGACAAAAGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQLWSGSLFSERQMFKGVEVTQP*EDKSRV Trigger: GACACGGCTTTTGTCTTCCCAAGGCTGCGTGACTTC...CACCCCCTTGAACATTTGCCTCTCTGAGAATAGACTTCCTGACCACAGCTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | GGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATTGTCATCATCTCGAGTaGCATAGACAGCCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GESDLSLPEHHSCGQEVYCHHLE*HRQPTG Trigger: GCCTGTGGGCTGTCTATGCCACTCGAGATGATGACA...ATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTGGGCTTTCAACTCGGTTATAGCGAAGGCTaGCATGGGCACCATATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLACNWGKMWNFFVGFQLGYSEG*HGHHIG Trigger: GCCGATATGGTGCCCATGCCAGCCTTCGCTATAACC...GAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | GGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATCTTCAGGATCTTCATTaGCCTCACCTGAGCGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GESDLSLPEHHSCGQEVYLQDLH*PHLSDC Trigger: ACAGTCGCTCAGGTGAGGTCAATGAAGATCCTGAAG...ATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | GGATGTGTTTGTTGGGGAGCTGGTGAGACAGACCAACATCTGGGATGGTCACTGGTTCGGTTTGCCAAGTaGAATTTGATCAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCVCWGAGETDQHLGWSLVRFAK*NLISCR Trigger: TCTGCAGCTGATCAAATTTCACTTGGCAAACCGAAC...CAGTGACCATCCCAGATGTTGGTCTGTCTCACCAGCTCCCCAACAAACACATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | TCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTATTCTCAGAAAATAGGAGAGTGCTaGCCTTTCAGGGGCGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLSLPEHHSCGQEVYSQKIGEC*PFRGES Trigger: ACTCTCGCCCCTGAAAGGGCAGCACTCTCCTATTTT...CTGAGAATAGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | CTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTaGTGGGCTTTCAACTCACTCTCCTCCAGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWPAIGGKCGIS*WAFNSLSSSRV Trigger: GACCCTACTGGAGGAGAGTGAGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTGGGCTTTCAACTGAATACGAGCCCTACTaGCAGGGCGGGTGTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGLQLGENVEFLCGLSTEYEPY*QGGCYR Trigger: TCTATAACACCCGCCCTGCCAGTAGGGCTCGTATTC...AGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTTGTATTTGCAGTTCCTaGGGTCCAACACCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KENLTCPFLSITAVVRKSCICSS*GPTPSS Trigger: AGAAGAGGGTGTTGGACCCCAGGAACTGCAAATACA...AGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169286.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCAGGAAGTCTTCTGTGGGTCTAACTTaGCTAGACACAAATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KENLTCPFLSITAVVRKSSVGLT*LDTNAC Trigger: ACAGGCATTTGTGTCTAGCCAAGTTAGACCCACAGA...AGACTTCCTGACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGCCTGCAATTGGGGGAAAATGTGGAATTTCTTTGTGGGCTTTCAACTTACACAGGGCAAAGCTaGGTTCTGTGTCTCCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSGLQLGENVEFLCGLSTYTGQS*VLCLQI Trigger: TATCTGGAGACACAGAACCCAGCTTTGCCCTGTGTA...AGTTGAAAGCCCACAAAGAAATTCCACATTTTCCCCCAATTGCAGGCCAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | TTCTGGCAAACGAAGATGTCACAAGCACACACCTGTTaGAAGGACCCAGGCTGTAGACAATGCAGCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: FWQTKMSQAHTC*KDPGCRQCSHL Trigger: TAAATGGCTGCATTGTCTACAGCCTGGGTCCTTCAAACAGGTGTGTGCTTGTGACATCTTCGTTTGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR TCA 90 bp | AGTGCCCTTGGATCTAAGTTCTCTGATCCATCATTTCTAAAATGCCCAGAAAGGGCAACATCTTGTTTTTaGAGTCCCGAAGCTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SALGSKFSDPSFLKCPERATSCF*SPEARQ Trigger: CTGCCGAGCTTCGGGACTTCAAAAACAAGATGTTGC...CCTTTCTGGGCATTTTAGAAATGATGGATCAGAGAACTTAGATCCAAGGGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | ATCATTTCTAAAATGCCCAGAAAGGAGAATCTGACTTGTCCCTTCCTGAGCATCGCCCTCCTCATCAGCTaGCAGGTCGATATATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: IISKMPRKENLTCPFLSIALLIS*QVDICI Trigger: GATACATATATCGACCTGGCAGCTGATGAGGAGGGC...GATGCTCAGGAAGGGACAAGTCAGATTCTCCTTTCTGGGCATTTTAGAAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | ATTAGGGTATATGAGCTACCACCACTGGCCTTCGTTTaGAAGGATGAACTGCAGGAGAGCTCACAGGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: IRVYELPPLAFV*KDELQESSQEY Trigger: ATATTCCTGTGAGCTCTCCTGCAGTTCATCCTTCAAAACGAAGGCCAGTGGTGGTAGCTCATATACCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| 3UTR CAA 72 bp | GCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCATTaGATGAATTTGGACAGTTCACGACATCTACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AKTVSLSSRSFH*MNLDSSRHLPT Trigger: TGTGGGTAGATGTCGTGAACTGTCCAAATTCATCAAATGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS-3UTR GCA 90 bp | AGTGCCCTTGGATCTAAGTTCTCTGATCCATCATTTCTAAAATGCCCAGAAAGGCACCACTGTTCGGTTTaGCAAGTGAAATTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SALGSKFSDPSFLKCPERHHCSV*QVKFDQ Trigger: CTGATCAAATTTCACTTGGCAAACCGAACAGTGGTG...CCTTTCTGGGCATTTTAGAAATGATGGATCAGAGAACTTAGATCCAAGGGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS GCA 90 bp | GCCTTCGAGCATAATAAAGGAAGCCACCGTACACCAGCTGCCCCGTaGCTACCCAGGGGAAGGGCACCCGAATTCGGGAAGCTTTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AFEHNKGSHRTPAAP*LPRGRAPEFGKLSG Trigger: CCCGGAAAGCTTCCCGAATTCGGGTGCCCTTCCCCTGGGTAGGCACGGGGCAGCTGGTGTACGGTGGCTTCCTTTATTATGCTCGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS TCA 90 bp | AGGGCACCCGAATTCGGGAAGCTTTCCGGGCAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGAAGACAAAAGCCGTGTCGTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPEFGKLSGQPWQG*SHAALGRQKPCRSG Trigger: CCCAGAACGACACGGCTTTTGTCTTCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTGCCCGGAAAGCTTCCCGAATTCGGGTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS CCA 90 bp | CATCCCAGGCATACAGCTGGCGCTCACGGGGGTTATAGCGAAGGCTaGCATGGGCACCATATCGGCGTGGAAAATAGGAGAGTGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HPRHTAGAHGGYSEG*HGHHIGVENRRVLP Trigger: GGGCAGCACTCTCCTATTTTCCACGCCGATATGGTGCCCATGCCAGCCTTCGCTATAACCCCCGTGAGCGCCAGCTGTATGCCTGGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
||
| CDS TCA 90 bp | CCCGCTCCTTCTCTGCCACCTCCAGGAGAGGCAACATCTTGTTTTTaGAGTCCCGAAGCTCGGCAGCATGCCGACTACTCTGATCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAPSLPPPGEATSCF*SPEARQHADYSDPG Trigger: GCCAGGATCAGAGTAGTCGGCATGCTGCCGAGCTTCGGGACTTCAAAAACAAGATGTTGCCTCTCCTGGAGGTGGCAGAGAAGGAGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 90 bp | GCGAAGGCTGGCATGGGCACCATATCGGCGTGGAAAATAGGAGAGTaGTGCCCTTTCAGGGGCGAGAGTACCACTGGCATCGAAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: AKAGMGTISAWKIGE*CPFRGESTTGIEGT Trigger: TGTTCCTTCGATGCCAGTGGTACTCTCGCCCCTGAAAGGGCAGCACTCTCCTATTTTCCACGCCGATATGGTGCCCATGCCAGCCTTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 90 bp | GTGGAAAATAGGAGAGTGCTGCCCTTTCAGGGGCGAGAGTACCACTaGCATCGAAGGAACACTGAATACGAGCCCTACTGGCAGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: VENRRVLPFQGREYH*HRRNTEYEPYWQGG Trigger: CCCGCCCTGCCAGTAGGGCTCGTATTCAGTGTTCCTTCGATGCCAGTGGTACTCTCGCCCCTGAAAGGGCAGCACTCTCCTATTTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS-3UTR CAA 90 bp | TCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTGTTCTCATTTCTTCGGCCCTaGCCTTTGGCTCCAGGACCT | + |
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Preference number: 5 (lower is better) Translates to: SQRGKCSRGWTPEARELFSFLRP*PLAPGP Trigger: AGGTCCTGGAGCCAAAGGCAAGGGCCGAAGAAATGA...GAACAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS TCA 90 bp | TACTGGCAGGGCGGGTGTTATAGACAACGTACAGGGTCCCACAGATaGCAAACGCAGCCTCTGCGTTCTCTCTGGGACATGGTGTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: YWQGGCYRQRTGSHR*QTQPLRSLWDMVCP Trigger: GGGACACACCATGTCCCAGAGAGAACGCAGAGGCTGCGTTTGTCATCTGTGGGACCCTGTACGTTGTCTATAACACCCGCCCTGCCAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 90 bp | AAGGCTGGCATGGGCACCATATCGGCGTGGAAAATAGGAGAGTGCTaGCCTTTCAGGGGCGAGAGTACCACTGGCATCGAAGGAACACTG | + |
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Preference number: 5 (lower is better) Translates to: KAGMGTISAWKIGEC*PFRGESTTGIEGTL Trigger: CAGTGTTCCTTCGATGCCAGTGGTACTCTCGCCCCTGAAAGGGCAGCACTCTCCTATTTTCCACGCCGATATGGTGCCCATGCCAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS TCA 90 bp | TTTCAAGACGGTCCACTCTTCCTGAGATGGAGTCTGCTTCAGTTCTaGGGGTCTCCCGCTCCTTCTCTGCCACCTCCAGGAGAGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: FQDGPLFLRWSLLQF*GSPAPSLPPPGEAT Trigger: TGTTGCCTCTCCTGGAGGTGGCAGAGAAGGAGCGGGAGACCCTCAGAACTGAAGCAGACTCCATCTCAGGAAGAGTGGACCGTCTTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 90 bp | GTGGGTCTAACTTGGCTAGACACAAATGCCTGTCATCATCTCGAGTaGCATAGACAGCCCACAGGCCCTCCTCATCAGCTGCCAGGTCGA | + |
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Preference number: 5 (lower is better) Translates to: VGLTWLDTNACHHLE*HRQPTGPPHQLPGR Trigger: TCGACCTGGCAGCTGATGAGGAGGGCCTGTGGGCTGTCTATGCCACTCGAGATGATGACAGGCATTTGTGTCTAGCCAAGTTAGACCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 90 bp | GTTATAGACAACGTACAGGGTCCCACAGATGACAAACGCAGCCTCTaGGTTCTCTCTGGGACATGGTGTGTCCCACTGCTGCTCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: VIDNVQGPTDDKRSL*VLSGTWCVPLLLCV Trigger: GACACAGAGCAGCAGTGGGACACACCATGTCCCAGAGAGAACGCAGAGGCTGCGTTTGTCATCTGTGGGACCCTGTACGTTGTCTATAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 90 bp | TGCCGTCTAACACGTAGATCTTCTCTGCTGGCCCCAGCGGATCCTTaGTCCATAGGCCAACTGAACCACCAAACCGCTTCAGGATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: CRLTRRSSLLAPADP*SIGQLNHQTASGSS Trigger: TGAAGATCCTGAAGCGGTTTGGTGGTTCAGTTGGCCTATGGACCAAGGATCCGCTGGGGCCAGCAGAGAAGATCTACGTGTTAGACGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 90 bp | AACGCAGCCTCTGCGTTCTCTCTGGGACATGGTGTGTCCCACTGCTaGTCTGTGTCAAGTGTCTGTGGGTCTAACTTGGCTAGACACAAA | + |
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Preference number: 5 (lower is better) Translates to: NAASAFSLGHGVSHC*SVSSVCGSNLARHK Trigger: TTTGTGTCTAGCCAAGTTAGACCCACAGACACTTGACACAGAGCAGCAGTGGGACACACCATGTCCCAGAGAGAACGCAGAGGCTGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 90 bp | AGGACCTCCAGTCACCTTCTCATCCAGCTCTACACAGGGCAAAGCTaGGTTCTGTGTCTCCAGATAGTCTACCTCCCTTTCAAGACGGTC | + |
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Preference number: 5 (lower is better) Translates to: RTSSHLLIQLYTGQS*VLCLQIVYLPFKTV Trigger: GACCGTCTTGAAAGGGAGGTAGACTATCTGGAGACACAGAACCCAGCTTTGCCCTGTGTAGAGCTGGATGAGAAGGTGACTGGAGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS-3UTR CAA 90 bp | TTCTCAGAGAGGCAAATGTTCAAGGGGGTGGACCCCAGAGGCCCGGGAACTGTTAGGAGAGGCAACATCTaGTTTTTGAAGTCCCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: FSERQMFKGVDPRGPGTVRRGNI*FLKSRS Trigger: GCTTCGGGACTTCAAAAACAAGATGTTGCCTCTCCT...AACAGTTCCCGGGCCTCTGGGGTCCACCCCCTTGAACATTTGCCTCTCTGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS-3UTR CAA 90 bp | TTAATGATGGGATTCAGCTGCCAAGACTGTCTCCTTGAGCAGCAGATCGTTTCACTTCGGCCCTTGCCTTaGGCTCCAGGACCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: LMMGFSCQDCLLEQQIVSLRPLP*APGPPV Trigger: GACTGGAGGTCCTGGAGCCAAAGGCAAGGGCCGAAG...TGAAACGATCTGCTGCTCAAGGAGACAGTCTTGGCAGCTGAATCCCATCATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 90 bp | AGTCCGTCACCATATCGTATTTCTCATTTCTTCGGCCCTTGCCTTTaGCTCCAGGACCTCCAGTCACCTTCTCATCCAGCTCTACACAGG | + |
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Preference number: 5 (lower is better) Translates to: SPSPYRISHFFGPCL*LQDLQSPSHPALHR Trigger: CCTGTGTAGAGCTGGATGAGAAGGTGACTGGAGGTCCTGGAGCCAAAGGCAAGGGCCGAAGAAATGAGAAATACGATATGGTGACGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS-3UTR CAA 90 bp | TCTCTGAAGCTCTGCCTTGTGAGTCTAGGCATTAAAGAGGGGGAGGAGAGATGCGCTTCAGGATCTTCATaGACCTCACCTGAGCGACTG | + |
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Preference number: 5 (lower is better) Translates to: SLKLCLVSLGIKEGEERCASGSS*TSPERL Trigger: CAGTCGCTCAGGTGAGGTCAATGAAGATCCTGAAGC...GCATCTCTCCTCCCCCTCTTTAATGCCTAGACTCACAAGGCAGAGCTTCAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 90 bp | GTGTGTCCCACTGCTGCTCTGTGTCAAGTGTCTGTGGGTCTAACTTaGCTAGACACAAATGCCTGTCATCATCTCGAGTGGCATAGACAG | + |
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Preference number: 5 (lower is better) Translates to: VCPTAALCQVSVGLT*LDTNACHHLEWHRQ Trigger: CTGTCTATGCCACTCGAGATGATGACAGGCATTTGTGTCTAGCCAAGTTAGACCCACAGACACTTGACACAGAGCAGCAGTGGGACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGAAAGGAGAATCTGACTTGTCCCTTCCTGAGCATCACAGCTGTGGTCCACAACCATCTGTATTaGCAGTTCCTGGGGTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: MPRKENLTCPFLSITAVVHNHLY*QFLGSN Trigger: GTTGGACCCCAGGAACTGCAAATACAGATGGTTGTG...GACCACAGCTGTGATGCTCAGGAAGGGACAAGTCAGATTCTCCTTTCTGGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169286.2 |
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| CDS-3UTR CAA 90 bp | TCTCTGAAGCTCTGCCTTGTGAGTCTAGGCATTAAAGAGGGGGAGGAGAGATGCAATATCGGCTGCTCTTaGAGAGGGGACCTGGATTCA | + |
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Preference number: 5 (lower is better) Translates to: SLKLCLVSLGIKEGEERCNIGCS*RGDLDS Trigger: TGAATCCAGGTCCCCTCTCAAAGAGCAGCCGATATT...GCATCTCTCCTCCCCCTCTTTAATGCCTAGACTCACAAGGCAGAGCTTCAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169286.2 |
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| CDS TCA 90 bp | TCTGCAGGGAACACTGAGCTATCCACCACTGTTCGGTTTGCCAAGTaGAATTTGATCAGCTGCAGAGTGTTCTCCAATTCACCACCCCCT | + |
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Preference number: 5 (lower is better) Translates to: SAGNTELSTTVRFAK*NLISCRVFSNSPPP Trigger: AGGGGGTGGTGAATTGGAGAACACTCTGCAGCTGATCAAATTTCACTTGGCAAACCGAACAGTGGTGGATAGCTCAGTGTTCCCTGCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 72 bp | GGCATGGGCACCATATCGGCGTGGAAAATAGGAGAGTaGTGCCCTTTCAGGGGCGAGAGTACCACTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: GMGTISAWKIGE*CPFRGESTTGI Trigger: GATGCCAGTGGTACTCTCGCCCCTGAAAGGGCAGCACTCTCCTATTTTCCACGCCGATATGGTGCCCATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS TCA 72 bp | GAATTCGGGAAGCTTTCCGGGCAGCCATGGCAAGGGTaGAGTCACGCAGCCTTGGGAAGACAAAAGCCGTGT | + |
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Preference number: 6 (lower is better) Translates to: EFGKLSGQPWQG*SHAALGRQKPC Trigger: ACACGGCTTTTGTCTTCCCAAGGCTGCGTGACTTCACCCTTGCCATGGCTGCCCGGAAAGCTTCCCGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 72 bp | GCAGCCTTGGGAAGACAAAAGCCGTGTCGTTCTGGGTaGCGTCTAACACGTAGATCTTCTCTGCTGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: AALGRQKPCRSG*RLTRRSSLLAP Trigger: TGGGGCCAGCAGAGAAGATCTACGTGTTAGACGGCACCCAGAACGACACGGCTTTTGTCTTCCCAAGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | AGGAGAGTGCTGCCCTTTCAGGGGCGAGAGTACCACTaGCATCGAAGGAACACTGAATACGAGCCCTACTGG | + |
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Preference number: 6 (lower is better) Translates to: RRVLPFQGREYH*HRRNTEYEPYW Trigger: CCAGTAGGGCTCGTATTCAGTGTTCCTTCGATGCCAGTGGTACTCTCGCCCCTGAAAGGGCAGCACTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | GTTATAGCGAAGGCTGGCATGGGCACCATATCGGCGTaGAAAATAGGAGAGTGCTGCCCTTTCAGGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: VIAKAGMGTISA*KIGECCPFRGE Trigger: CTCGCCCCTGAAAGGGCAGCACTCTCCTATTTTCCACGCCGATATGGTGCCCATGCCAGCCTTCGCTATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | CATACAGCTGGCGCTCACGGGGGTTATAGCGAAGGCTaGCATGGGCACCATATCGGCGTGGAAAATAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HTAGAHGGYSEG*HGHHIGVENRR Trigger: TCTCCTATTTTCCACGCCGATATGGTGCCCATGCCAGCCTTCGCTATAACCCCCGTGAGCGCCAGCTGTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS TCA 72 bp | GGCGGGTGTTATAGACAACGTACAGGGTCCCACAGATaGCAAACGCAGCCTCTGCGTTCTCTCTGGGACATG | + |
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Preference number: 6 (lower is better) Translates to: GGCYRQRTGSHR*QTQPLRSLWDM Trigger: CATGTCCCAGAGAGAACGCAGAGGCTGCGTTTGTCATCTGTGGGACCCTGTACGTTGTCTATAACACCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 72 bp | ATGGGCACCATATCGGCGTGGAAAATAGGAGAGTGCTaGCCTTTCAGGGGCGAGAGTACCACTGGCATCGAA | + |
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Preference number: 6 (lower is better) Translates to: MGTISAWKIGEC*PFRGESTTGIE Trigger: TTCGATGCCAGTGGTACTCTCGCCCCTGAAAGGGCAGCACTCTCCTATTTTCCACGCCGATATGGTGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | CACTGGCATCGAAGGAACACTGAATACGAGCCCTACTaGCAGGGCGGGTGTTATAGACAACGTACAGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: HWHRRNTEYEPY*QGGCYRQRTGS Trigger: GGACCCTGTACGTTGTCTATAACACCCGCCCTGCCAGTAGGGCTCGTATTCAGTGTTCCTTCGATGCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS TCA 72 bp | TCTCTGCCACCTCCAGGAGAGGCAACATCTTGTTTTTaGAGTCCCGAAGCTCGGCAGCATGCCGACTACTCT | + |
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Preference number: 6 (lower is better) Translates to: SLPPPGEATSCF*SPEARQHADYS Trigger: AGAGTAGTCGGCATGCTGCCGAGCTTCGGGACTTCAAAAACAAGATGTTGCCTCTCCTGGAGGTGGCAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 72 bp | TCTGCGTTCTCTCTGGGACATGGTGTGTCCCACTGCTaGTCTGTGTCAAGTGTCTGTGGGTCTAACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SAFSLGHGVSHC*SVSSVCGSNLA Trigger: AGCCAAGTTAGACCCACAGACACTTGACACAGAGCAGCAGTGGGACACACCATGTCCCAGAGAGAACGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | ACTTGGCTAGACACAAATGCCTGTCATCATCTCGAGTaGCATAGACAGCCCACAGGCCCTCCTCATCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TWLDTNACHHLE*HRQPTGPPHQL Trigger: CAGCTGATGAGGAGGGCCTGTGGGCTGTCTATGCCACTCGAGATGATGACAGGCATTTGTGTCTAGCCAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CAA 72 bp | TTCTCTGCCACCTCCAGGAGAGGCAACATCTTGTTTTaGAAGTCCCGAAGCTCGGCAGCATGCCGACTACTC | + |
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Preference number: 6 (lower is better) Translates to: FSATSRRGNILF*KSRSSAACRLL Trigger: GAGTAGTCGGCATGCTGCCGAGCTTCGGGACTTCAAAAACAAGATGTTGCCTCTCCTGGAGGTGGCAGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS GCA 72 bp | GTCTGCTTCAGTTCTGAGGGTCTCCCGCTCCTTCTCTaGCACCTCCAGGAGAGGCAACATCTTGTTTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VCFSSEGLPLLL*HLQERQHLVFE Trigger: TTCAAAAACAAGATGTTGCCTCTCCTGGAGGTGGCAGAGAAGGAGCGGGAGACCCTCAGAACTGAAGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | AGTCACCTTCTCATCCAGCTCTACACAGGGCAAAGCTaGGTTCTGTGTCTCCAGATAGTCTACCTCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SHLLIQLYTGQS*VLCLQIVYLPF Trigger: GAAAGGGAGGTAGACTATCTGGAGACACAGAACCCAGCTTTGCCCTGTGTAGAGCTGGATGAGAAGGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | CCATATCGTATTTCTCATTTCTTCGGCCCTTGCCTTTaGCTCCAGGACCTCCAGTCACCTTCTCATCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PYRISHFFGPCL*LQDLQSPSHPA Trigger: AGCTGGATGAGAAGGTGACTGGAGGTCCTGGAGCCAAAGGCAAGGGCCGAAGAAATGAGAAATACGATATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CCA 72 bp | ACTGCTGCTCTGTGTCAAGTGTCTGTGGGTCTAACTTaGCTAGACACAAATGCCTGTCATCATCTCGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TAALCQVSVGLT*LDTNACHHLEW Trigger: CCACTCGAGATGATGACAGGCATTTGTGTCTAGCCAAGTTAGACCCACAGACACTTGACACAGAGCAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS CAA 72 bp | CACTGCTGCTCTGTGTCAAGTGTCTGTGGGTCTAACTaGGCTAGACACAAATGCCTGTCATCATCTCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: HCCSVSSVCGSN*ARHKCLSSSRV Trigger: CACTCGAGATGATGACAGGCATTTGTGTCTAGCCAAGTTAGACCCACAGACACTTGACACAGAGCAGCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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| CDS TCA 72 bp | AACACTGAGCTATCCACCACTGTTCGGTTTGCCAAGTaGAATTTGATCAGCTGCAGAGTGTTCTCCAATTCA | + |
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Preference number: 6 (lower is better) Translates to: NTELSTTVRFAK*NLISCRVFSNS Trigger: TGAATTGGAGAACACTCTGCAGCTGATCAAATTTCACTTGGCAAACCGAACAGTGGTGGATAGCTCAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029440.10 |
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