Pregenerated sensors for OLFML2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046618Ensembl transcript IDs: ENSMUST00000057279.6
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ACCCACACCCAGGGCCAAGGGAAAGGCCGCGGCCTCCAAGTTCTCTaGAGAGGTTGGAAGAGGAGCCCGTGGTGGTCAGCTGGGTGGGGG | + |
Preference number: 1 (lower is better) Translates to: THTQGQGKGRGLQVL*RGWKRSPWWSAGWG Trigger: CCCCCACCCAGCTGACCACCACGGGCTCCTCTTCCAACCTCTTCAGAGAACTTGGAGGCCGCGGCCTTTCCCTTGGCCCTGGGTGTGGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | ACCAGCATTCGACCAGAAGAGAAGCCTGGAACTGCACAACAGCAGTaGGTAGGTCCCAAAGACCTTGCTTGCGGAGCCCTGGAAGGGGAC | + |
Preference number: 1 (lower is better) Translates to: TSIRPEEKPGTAQQQ*VGPKDLACGALEGD Trigger: GTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGGACCTACGCACTGCTGTTGTGCAGTTCCAGGCTTCTCTTCTGGTCGAATGCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 90 bp | GCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAGACCTaGCTGGGCTGGCTGTCACTGTCCCTCTTTATTTCAGGAGTGAGT | + |
Preference number: 1 (lower is better) Translates to: AGWGKLDVATTVSQT*LGWLSLSLFISGVS Trigger: ACTCACTCCTGAAATAAAGAGGGACAGTGACAGCCAGCCCAGCCAGGTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTaGATGGACCGAAGGCATGCGCCACCACATCCAACTATAGCCATG | + |
Preference number: 1 (lower is better) Translates to: SLAWNSEICLPLPPR*MDRRHAPPHPTIAM Trigger: CATGGCTATAGTTGGATGTGGTGGCGCATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 90 bp | GTCAAAAGGGAAAGCGCAGGGAAAGCTCCCGGCGCAGCGTTGCTGTaGAAGTGTCACCTACTGGGCACTGAGAAAGCACTCAAAGCCATC | + |
Preference number: 1 (lower is better) Translates to: VKRESAGKAPGAALL*KCHLLGTEKALKAI Trigger: GATGGCTTTGAGTGCTTTCTCAGTGCCCAGTAGGTGACACTTCCACAGCAACGCTGCGCCGGGAGCTTTCCCTGCGCTTTCCCTTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | AGAGAGTCAAAAGGGAAAGCGCAGGGAAAGCTCCCGGCGCAGCGTTaGTGTGGAAGTGTCACCTACTGGGCACTGAGAAAGCACTCAAAG | + |
Preference number: 1 (lower is better) Translates to: RESKGKAQGKLPAQR*CGSVTYWALRKHSK Trigger: CTTTGAGTGCTTTCTCAGTGCCCAGTAGGTGACACTTCCACAGCAACGCTGCGCCGGGAGCTTTCCCTGCGCTTTCCCTTTTGACTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | ATTTTTGGACCAGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTaGCTCCCAGGTGCATGGACCGAAGGCATGCGCCACCACATCCAA | + |
Preference number: 1 (lower is better) Translates to: IFGPVWPGTQKSVCL*LPGAWTEGMRHHIQ Trigger: TTGGATGTGGTGGCGCATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACTGGTCCAAAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | AACTTGATTTTTGGACCAGTCTGGCCTGGAACTCAGAAATCTGTCTaGCTCTGCCTCCCAGGTGCATGGACCGAAGGCATGCGCCACCAC | + |
Preference number: 1 (lower is better) Translates to: NLIFGPVWPGTQKSV*LCLPGAWTEGMRHH Trigger: GTGGTGGCGCATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACTGGTCCAAAAATCAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 90 bp | TGCCTCTGCCTCCGGGTTTTATCCTGGAAGCTGAGAAGTCTCTTCTaGACTCCTGTCCTGTCTCCCTCAGATTCTCAGGCTGCTGAATCA | + |
Preference number: 1 (lower is better) Translates to: CLCLRVLSWKLRSLF*TPVLSPSDSQAAES Trigger: TGATTCAGCAGCCTGAGAATCTGAGGGAGACAGGACAGGAGTTCAGAAGAGACTTCTCAGCTTCCAGGATAAAACCCGGAGGCAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | AAACCAGCCTTTCGGAGAGCTCTTGCCCTGGCCATCTTGAATGACTaGAACTACCAGTTCTTTTGGGGCTTGTTACCAGCACGGCACAAA | + |
Preference number: 1 (lower is better) Translates to: KPAFRRALALAILND*NYQFFWGLLPARHK Trigger: TTTGTGCCGTGCTGGTAACAAGCCCCAAAAGAACTGGTAGTTGCAGTCATTCAAGATGGCCAGGGCAAGAGCTCTCCGAAAGGCTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 90 bp | CTTTGTAGAAACCAGCCTTTCGGAGAGCTCTTGCCCTGGCCATCTTaGATGACTGCAACTACCAGTTCTTTTGGGGCTTGTTACCAGCAC | + |
Preference number: 1 (lower is better) Translates to: LCRNQPFGELLPWPS*MTATTSSFGACYQH Trigger: GTGCTGGTAACAAGCCCCAAAAGAACTGGTAGTTGCAGTCATTCAAGATGGCCAGGGCAAGAGCTCTCCGAAAGGCTGGTTTCTACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 90 bp | GCTCTTGCCCTGGCCATCTTGAATGACTGCAACTACCAGTTCTTTTaGGGCTTGTTACCAGCACGGCACAAAGATAGCAGGAAACATGCT | + |
Preference number: 1 (lower is better) Translates to: ALALAILNDCNYQFF*GLLPARHKDSRKHA Trigger: AGCATGTTTCCTGCTATCTTTGTGCCGTGCTGGTAACAAGCCCCAAAAGAACTGGTAGTTGCAGTCATTCAAGATGGCCAGGGCAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 90 bp | TCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCAACAATGCCTaGAAGAAAGGAAGTCTGCACGGAACCTGCATCTCCCTTCCCAGC | + |
Preference number: 1 (lower is better) Translates to: SGVSYSLSKTSPNNA*KKGSLHGTCISLPS Trigger: GCTGGGAAGGGAGATGCAGGTTCCGTGCAGACTTCCTTTCTTCCAGGCATTGTTGGGTGATGTTTTACTTAAGGAATAACTCACTCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | GGCTATCTGGGTCTGAAGGTCACAAGCGGTACCAGATCATCGAGCTaGCAATCCTATTTTAAGGTAGCTTATATATGTTCACTTGTGTGT | + |
Preference number: 1 (lower is better) Translates to: GYLGLKVTSGTRSSS*QSYFKVAYICSLVC Trigger: ACACACAAGTGAACATATATAAGCTACCTTAAAATAGGATTGGCAGCTCGATGATCTGGTACCGCTTGTGACCTTCAGACCCAGATAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 90 bp | TGGGCAAAAGAACTTCTCTCCAGCTTTAAAAAGAATGTCCAAAGCTaGCATAAGGCTGGCTTGAAAGGTCATGTTCTTAGGGCTATCTGG | + |
Preference number: 1 (lower is better) Translates to: WAKELLSSFKKNVQS*HKAGLKGHVLRAIW Trigger: CCAGATAGCCCTAAGAACATGACCTTTCAAGCCAGCCTTATGGCAGCTTTGGACATTCTTTTTAAAGCTGGAGAGAAGTTCTTTTGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | GTCAGCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAGACCTGGCTATAGCCTACTCCAGCTaGAATGCTGCTCCTTTGGGC | + |
Preference number: 2 (lower is better) Translates to: VSWVGEAGCGYHCESDLAIAYSS*NAAPLG Trigger: GCCCAAAGGAGCAGCATTCCAGCTGGAGTAGGCTAT...AGCCAGGTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTGCATGGACACAGAGGGAGGGCCATaGACCTGGCCAGCATTTGCT | + |
Preference number: 2 (lower is better) Translates to: SLAWNSEICLPLPPRCMDTEGGP*TWPAFA Trigger: AGCAAATGCTGGCCAGGTCCATGGCCCTCCCTCTGT...GTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 90 bp | GAGAGAGTCAAAAGGGAAAGCGCAGGGAAAGCTCCCGGCGCAGCGTaGCTGTGGAAGTGTCACCTACTGGGCACTGAGAAAGCACTCAAA | + |
Preference number: 2 (lower is better) Translates to: ERVKRESAGKAPGAA*LWKCHLLGTEKALK Trigger: TTTGAGTGCTTTCTCAGTGCCCAGTAGGTGACACTTCCACAGCAACGCTGCGCCGGGAGCTTTCCCTGCGCTTTCCCTTTTGACTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 90 bp | GCACCTCTCACATGGTTAGGCTATGACATCACAAAACACAGAGTCTaGAAAAGACCCACACCCAGGGCCAAGGGAAAGGCCGCGGCCTCC | + |
Preference number: 2 (lower is better) Translates to: APLTWLGYDITKHRV*KRPTPRAKGKAAAS Trigger: GGAGGCCGCGGCCTTTCCCTTGGCCCTGGGTGTGGGTCTTTTCAAGACTCTGTGTTTTGTGATGTCATAGCCTAACCATGTGAGAGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR GCA 90 bp | GTGACCTTCTGGAATGTGGTTAGACAGAAGAGCAGGAGAGCACAGGGGCTGCCCACTGCACAACAGCAGTaGGTAGGTCCCAAAGACCTT | + |
Preference number: 2 (lower is better) Translates to: VTFWNVVRQKSRRAQGLPTAQQQ*VGPKDL Trigger: AAGGTCTTTGGGACCTACGCACTGCTGTTGTGCAGT...GGGCAGCCCCTGTGCTCTCCTGCTCTTCTGTCTAACCACATTCCAGAAGGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | ATGAGAGAAAATACTGCCGATTTGGGGGTTCCAGGGTTGATTAGTGTGACTGCATGGTGGTCAGCTGGGTaGGGGAAGCTGGATGTGGCT | + |
Preference number: 2 (lower is better) Translates to: MRENTADLGVPGLISVTAWWSAG*GKLDVA Trigger: AGCCACATCCAGCTTCCCCCACCCAGCTGACCACCA...TGCAGTCACACTAATCAACCCTGGAACCCCCAAATCGGCAGTATTTTCTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 90 bp | CTAGCCCAGGACACCCCCAAACGATACTTATATCAATTGCAAGAGTaGCTAGGGATAGCCCTTTCTCCTCTGCTGCTCTCCCTTGTGAAC | + |
Preference number: 2 (lower is better) Translates to: LAQDTPKRYLYQLQE*LGIALSPLLLSLVN Trigger: GTTCACAAGGGAGAGCAGCAGAGGAGAAAGGGCTATCCCTAGCAACTCTTGCAATTGATATAAGTATCGTTTGGGGGTGTCCTGGGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 90 bp | AGCCAATACCTAGCCCAGGACACCCCCAAACGATACTTATATCAATaGCAAGAGTTGCTAGGGATAGCCCTTTCTCCTCTGCTGCTCTCC | + |
Preference number: 2 (lower is better) Translates to: SQYLAQDTPKRYLYQ*QELLGIALSPLLLS Trigger: GGAGAGCAGCAGAGGAGAAAGGGCTATCCCTAGCAACTCTTGCAATTGATATAAGTATCGTTTGGGGGTGTCCTGGGCTAGGTATTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 90 bp | GGGTCAGCAGTAGACACCTTCAAGGGTACTGGGGATCAGTTGCTTTaGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCAAAGGAGATC | + |
Preference number: 2 (lower is better) Translates to: GSAVDTFKGTGDQLL*QAELSQYRALPKEI Trigger: GATCTCCTTTGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAGCAACTGATCCCCAGTACCCTTGAAGGTGTCTACTGCTGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR TCA 90 bp | TTGCTTTTGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCAAAGGAGATCAGCGAAGGGGACTGGAGGTaGGAAGATTGTGGCAAGGTC | + |
Preference number: 2 (lower is better) Translates to: LLLQAELSQYRALPKEISEGDWR*EDCGKV Trigger: GACCTTGCCACAATCTTCTCACCTCCAGTCCCCTTC...GCTGATCTCCTTTGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR TCA 90 bp | TATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGCCGATGGGGCCACCCACTCTaGGGACAAAGGCCTTACTCC | + |
Preference number: 2 (lower is better) Translates to: YMFTCVSTIPSQRKSWCRWGHPL*GQRPYS Trigger: GGAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCA...TCGGCACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 90 bp | GGCTATCGTGAGGACATAGCCTACTCCAGCTGGAATGCTGCTCCTTaGGGCTTTAGTCACTTCATCTACTCAACAGGCTTAAGGGAAGAA | + |
Preference number: 2 (lower is better) Translates to: GYREDIAYSSWNAAP*GFSHFIYSTGLREE Trigger: TTCTTCCCTTAAGCCTGTTGAGTAGATGAAGTGACTAAAGCCCAAAGGAGCAGCATTCCAGCTGGAGTAGGCTATGTCCTCACGATAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCGGAAGTGTCACCTACTaGGCACTGAGAAAGCACTCA | + |
Preference number: 2 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVGSVTY*ALRKHS Trigger: TGAGTGCTTTCTCAGTGCCCAGTAGGTGACACTTCC...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | TGTGTGGTAGTGGGAAGCCAGGTTTCCTTTAGAGCTCACCAATCAGCAGATTCCTCTCAAAGAAAATCCTaGTGCCGAGAGCCCAGTCTA | + |
Preference number: 2 (lower is better) Translates to: CVVVGSQVSFRAHQSADSSQRKS*CREPSL Trigger: TAGACTGGGCTCTCGGCACCAGGATTTTCTTTGAGA...GGAATCTGCTGATTGGTGAGCTCTAAAGGAAACCTGGCTTCCCACTACCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR TCA 90 bp | CTTTTGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCAAAGGAGATCAGCTGTGCCATAAGGCTGGCTTaGAAGGTCATGTTCTTAGGG | + |
Preference number: 2 (lower is better) Translates to: LLQAELSQYRALPKEISCAIRLA*KVMFLG Trigger: CCCTAAGAACATGACCTTTCAAGCCAGCCTTATGGC...ACAGCTGATCTCCTTTGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR GCA 90 bp | GCTTATATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTCCCAAAGACCTTGCTTaGGGAGCCCTGGAAGGGGAC | + |
Preference number: 2 (lower is better) Translates to: AYICSLVCPQSHLKENPGPKDLA*GALEGD Trigger: GTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGG...ACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | GCTTATATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTTTGCTTGCGGAGCCCTaGAAGGGGACTGGAGGTGAG | + |
Preference number: 2 (lower is better) Translates to: AYICSLVCPQSHLKENPGLLAEP*KGTGGE Trigger: CTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAA...ACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR TCA 90 bp | ATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCAACAATGCCTGGAAGCCACATTGCCAGAGCTaGGCTGCCTATACCTTCTCA | + |
Preference number: 2 (lower is better) Translates to: ISGVSYSLSKTSPNNAWKPHCQS*AAYTFS Trigger: TGAGAAGGTATAGGCAGCTCAGCTCTGGCAATGTGG...CTTCCAGGCATTGTTGGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR GCA 90 bp | TGTGTGGTAGTGGGAAGCCAGGTTTCCTTTAGAGCTCACCAATCAGCAGATTCCATTTGCTTCAGTTACTaGTTAGTGACTGTAATGGTG | + |
Preference number: 2 (lower is better) Translates to: CVVVGSQVSFRAHQSADSICFSY*LVTVMV Trigger: CACCATTACAGTCACTAAGCAGTAACTGAAGCAAAT...GGAATCTGCTGATTGGTGAGCTCTAAAGGAAACCTGGCTTCCCACTACCACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR TCA 90 bp | TATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGCCGATTTTATCCTGGAAGCTaGGAAGTCTCTTCTGAACTC | + |
Preference number: 2 (lower is better) Translates to: YMFTCVSTIPSQRKSWCRFYPGS*EVSSEL Trigger: GAGTTCAGAAGAGACTTCTCAGCTTCCAGGATAAAA...TCGGCACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR GCA 90 bp | TATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGCCGATACCTTCTCATCTGCTaGAAAATGTGCAAGGAACAT | + |
Preference number: 2 (lower is better) Translates to: YMFTCVSTIPSQRKSWCRYLLIC*KMCKEH Trigger: ATGTTCCTTGCACATTTTGCAGCAGATGAGAAGGTA...TCGGCACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | CCATTTAAAAATGAGGAAATGAACTATGTTTACCATACAGCACACAAAGGCCTGCTCCGGGTTTTATCCTaGAAGCTGAGAAGTCTCTTC | + |
Preference number: 2 (lower is better) Translates to: PFKNEEMNYVYHTAHKGLLRVLS*KLRSLF Trigger: GAAGAGACTTCTCAGCTTCCAGGATAAAACCCGGAG...CAGGCCTTTGTGTGCTGTATGGTAAACATAGTTCATTTCCTCATTTTTAAATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CCA 90 bp | ATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCAACAATGCCTGGAAGGTAATGGTGACCTTCTaGAATGTGGTTAGACAGAAG | + |
Preference number: 2 (lower is better) Translates to: ISGVSYSLSKTSPNNAWKVMVTF*NVVRQK Trigger: CTTCTGTCTAACCACATTCCAGAAGGTCACCATTAC...CTTCCAGGCATTGTTGGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 72 bp | CAGCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTaGGTCAGACCTGGCTGGGCTGGCTGTCACTGTCCC | + |
Preference number: 3 (lower is better) Translates to: QLGGGSWMWLPL*VRPGWAGCHCP Trigger: GGGACAGTGACAGCCAGCCCAGCCAGGTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 72 bp | CAGGGCCAAGGGAAAGGCCGCGGCCTCCAAGTTCTCTaGAGAGGTTGGAAGAGGAGCCCGTGGTGGTCAGCT | + |
Preference number: 3 (lower is better) Translates to: QGQGKGRGLQVL*RGWKRSPWWSA Trigger: AGCTGACCACCACGGGCTCCTCTTCCAACCTCTTCAGAGAACTTGGAGGCCGCGGCCTTTCCCTTGGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | CCAGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTaGCTCCCAGGTGCATGGACCGAAGGCATGCGCCAC | + |
Preference number: 3 (lower is better) Translates to: PVWPGTQKSVCL*LPGAWTEGMRH Trigger: GTGGCGCATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | AGAGGTTGGAAGAGGAGCCCGTGGTGGTCAGCTGGGTaGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAG | + |
Preference number: 3 (lower is better) Translates to: RGWKRSPWWSAG*GKLDVATTVSQ Trigger: CTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGACCACCACGGGCTCCTCTTCCAACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | CTGAAGAGGTTGGAAGAGGAGCCCGTGGTGGTCAGCTaGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAG | + |
Preference number: 3 (lower is better) Translates to: LKRLEEEPVVVS*VGEAGCGYHCE Trigger: CTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGACCACCACGGGCTCCTCTTCCAACCTCTTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | AACTGCACAACAGCAGTGCGTAGGTCCCAAAGACCTTaGTTGCGGAGCCCTGGAAGGGGACTGGAGGTGAGA | + |
Preference number: 3 (lower is better) Translates to: NCTTAVRRSQRP*LRSPGRGLEVR Trigger: TCTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGGACCTACGCACTGCTGTTGTGCAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | CGACCAGAAGAGAAGCCTGGAACTGCACAACAGCAGTaGGTAGGTCCCAAAGACCTTGCTTGCGGAGCCCTG | + |
Preference number: 3 (lower is better) Translates to: RPEEKPGTAQQQ*VGPKDLACGAL Trigger: CAGGGCTCCGCAAGCAAGGTCTTTGGGACCTACGCACTGCTGTTGTGCAGTTCCAGGCTTCTCTTCTGGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CAA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTGCATGGACAGTTCTCTGAAGAGGTaGGAAGAGGAGCCCGTGGTG | + |
Preference number: 3 (lower is better) Translates to: SLAWNSEICLPLPPRCMDSSLKR*EEEPVV Trigger: CACCACGGGCTCCTCTTCCAACCTCTTCAGAGAACT...GTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | TGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTaGATGGACCGAAGGCATGCGCCACCACATCCAACT | + |
Preference number: 3 (lower is better) Translates to: WNSEICLPLPPR*MDRRHAPPHPT Trigger: AGTTGGATGTGGTGGCGCATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | TTTGGACCAGTCTGGCCTGGAACTCAGAAATCTGTCTaGCTCTGCCTCCCAGGTGCATGGACCGAAGGCATG | + |
Preference number: 3 (lower is better) Translates to: FGPVWPGTQKSV*LCLPGAWTEGM Trigger: CATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACTGGTCCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | CTCCCGGCGCAGCGTTGCTGTGGAAGTGTCACCTACTaGGCACTGAGAAAGCACTCAAAGCCATCAAAGCCA | + |
Preference number: 3 (lower is better) Translates to: LPAQRCCGSVTY*ALRKHSKPSKP Trigger: TGGCTTTGATGGCTTTGAGTGCTTTCTCAGTGCCCAGTAGGTGACACTTCCACAGCAACGCTGCGCCGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR GCA 72 bp | TCTGCCTCTGCCTCCCAGGTGCATGGACCGAAGGCATaGGCCACCACATCCAACTATAGCCATGGGTTTTAT | + |
Preference number: 3 (lower is better) Translates to: SASASQVHGPKA*ATTSNYSHGFY Trigger: ATAAAACCCATGGCTATAGTTGGATGTGGTGGCGCATGCCTTCGGTCCATGCACCTGGGAGGCAGAGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR-3UTR CAA 90 bp | CAGAGCCTGTTCCATCTTGGGGCCACCCACTCTGAGGACAAAGGCCTTACTCCTCTGGAGGTGAGAAGATaGTGGCAAGGTCATCTCATC | + |
Preference number: 3 (lower is better) Translates to: QSLFHLGATHSEDKGLTPLEVRR*WQGHLI Trigger: GATGAGATGACCTTGCCACAATCTTCTCACCTCCAG...AGGAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCAAGATGGAACAGGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | GGTTACCAGCATTCGACCAGAAGAGAAGCCTGGAACTaGACAACAGCAGTGCGTAGGTCCCAAAGACCTTGC | + |
Preference number: 3 (lower is better) Translates to: GYQHSTRREAWN*TTAVRRSQRPC Trigger: GCAAGGTCTTTGGGACCTACGCACTGCTGTTGTGCAGTTCCAGGCTTCTCTTCTGGTCGAATGCTGGTAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR TCA 72 bp | TGGCAAGGTCATCTCATCTGTAAAACGGGGCTATCGTaGGGACATAGCCTACTCCAGCTGGAATGCTGCTCC | + |
Preference number: 3 (lower is better) Translates to: WQGHLICKTGLS*GHSLLQLECCS Trigger: GGAGCAGCATTCCAGCTGGAGTAGGCTATGTCCTCACGATAGCCCCGTTTTACAGATGAGATGACCTTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR TCA 72 bp | GACCTTGCTTGCGGAGCCCTGGAAGGGGACTGGAGGTaGGAAGATTGTGGCAAGGTCATCTCATCTGTAAAA | + |
Preference number: 3 (lower is better) Translates to: DLACGALEGDWR*EDCGKVISSVK Trigger: TTTTACAGATGAGATGACCTTGCCACAATCTTCTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR GCA 72 bp | AAACATCACCCAACAATGCCTGGAAGAAAGGAAGTCTaGACGGAACCTGCATCTCCCTTCCCAGCACGGCAT | + |
Preference number: 3 (lower is better) Translates to: KHHPTMPGRKEV*TEPASPFPARH Trigger: ATGCCGTGCTGGGAAGGGAGATGCAGGTTCCGTGCAGACTTCCTTTCTTCCAGGCATTGTTGGGTGATGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | GCTCAAGGTTACCAGCATTCGACCAGAAGAGAAGCCTaGAACTGCACAACAGCAGTGCGTAGGTCCCAAAGA | + |
Preference number: 3 (lower is better) Translates to: AQGYQHSTRREA*NCTTAVRRSQR Trigger: TCTTTGGGACCTACGCACTGCTGTTGTGCAGTTCCAGGCTTCTCTTCTGGTCGAATGCTGGTAACCTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | AGGGCCATGGACCTGGCCAGCATTTGCTTCAGTTACTaGTTAGTGACTGTAATGGTGACCTTCTGGAATGTG | + |
Preference number: 3 (lower is better) Translates to: RAMDLASICFSY*LVTVMVTFWNV Trigger: CACATTCCAGAAGGTCACCATTACAGTCACTAAGCAGTAACTGAAGCAAATGCTGGCCAGGTCCATGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR GCA 72 bp | TTTCGGAGAGCTCTTGCCCTGGCCATCTTGAATGACTaGAACTACCAGTTCTTTTGGGGCTTGTTACCAGCA | + |
Preference number: 3 (lower is better) Translates to: FRRALALAILND*NYQFFWGLLPA Trigger: TGCTGGTAACAAGCCCCAAAAGAACTGGTAGTTGCAGTCATTCAAGATGGCCAGGGCAAGAGCTCTCCGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | ATACCTTCTCATCTGCTGCAAAATGTGCAAGGAACATaGGGACTAGAAGTAGCTACAGAGGGAGGGCCATGG | + |
Preference number: 3 (lower is better) Translates to: IPSHLLQNVQGT*GLEVATEGGPW Trigger: CCATGGCCCTCCCTCTGTAGCTACTTCTAGTCCCCATGTTCCTTGCACATTTTGCAGCAGATGAGAAGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | CTGGCCATCTTGAATGACTGCAACTACCAGTTCTTTTaGGGCTTGTTACCAGCACGGCACAAAGATAGCAGG | + |
Preference number: 3 (lower is better) Translates to: LAILNDCNYQFF*GLLPARHKDSR Trigger: CCTGCTATCTTTGTGCCGTGCTGGTAACAAGCCCCAAAAGAACTGGTAGTTGCAGTCATTCAAGATGGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR GCA 72 bp | GGTTTAAAGAGACCTAGTTCCGATCTCACCTCCATATaGCAGATACCCAACCCTGACCAAATCCCAAATCGC | + |
Preference number: 3 (lower is better) Translates to: GLKRPSSDLTSI*QIPNPDQIPNR Trigger: GCGATTTGGGATTTGGTCAGGGTTGGGTATCTGGCATATGGAGGTGAGATCGGAACTAGGTCTCTTTAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CAA 90 bp | TTCCTATCCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACATGCCATAAGGCTGGCTaGAAAGGTCATGTTCTTAGG | + |
Preference number: 3 (lower is better) Translates to: FLSLSSPVNGPLCSLLSTCHKAG*KGHVLR Trigger: CCTAAGAACATGACCTTTCAAGCCAGCCTTATGGCA...TGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGGATAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
||
3UTR-3UTR CAA 90 bp | TGTGTGGTAGTGGGAAGCCAGGTTTCCTTTAGAGCTCACCAATCAGCAGATTCCGGACCTGTATTTTCTTaGGTAAAACAAAGAGATGGG | + |
Preference number: 3 (lower is better) Translates to: CVVVGSQVSFRAHQSADSGPVFS*VKQRDG Trigger: CCCATCTCTTTGTTTTACCAAAGAAAATACAGGTCC...GGAATCTGCTGATTGGTGAGCTCTAAAGGAAACCTGGCTTCCCACTACCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 72 bp | TGTAGTTGCCTGAGCACCTCTCACATGGTTAGGCTATaGCATCACAAAACACAGAGTCTTGAAAAGACCCAC | + |
Preference number: 3 (lower is better) Translates to: CSCLSTSHMVRL*HHKTQSLEKTH Trigger: GTGGGTCTTTTCAAGACTCTGTGTTTTGTGATGTCATAGCCTAACCATGTGAGAGGTGCTCAGGCAACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 72 bp | TTCCGATCTCACCTCCATATGCCAGATACCCAACCCTaGCCAAATCCCAAATCGCTCAACTTCATAACCTAT | + |
Preference number: 3 (lower is better) Translates to: FRSHLHMPDTQP*PNPKSLNFITY Trigger: ATAGGTTATGAAGTTGAGCGATTTGGGATTTGGTCAGGGTTGGGTATCTGGCATATGGAGGTGAGATCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR TCA 72 bp | GATTTGGAAACCTGGCTCTTCCATTACCAGCCTATGTaGCAAGTAAGTTACCTGGGATTCAGTCTGACCATT | + |
Preference number: 3 (lower is better) Translates to: DLETWLFHYQPM*QVSYLGFSLTI Trigger: AATGGTCAGACTGAATCCCAGGTAACTTACTTGTCACATAGGCTGGTAATGGAAGAGCCAGGTTTCCAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | TCAGCAGATTCCATCTCCTTAGCACAGCCCCTTGCCTaGTTCTCATCACCAACAGGACAAAATCTAATTAAA | + |
Preference number: 3 (lower is better) Translates to: SADSISLAQPLA*FSSPTGQNLIK Trigger: TTTAATTAGATTTTGTCCTGTTGGTGATGAGAAGCAGGCAAGGGGCTGTGCTAAGGAGATGGAATCTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CCA 72 bp | AGTTATTCCTTAAGTAAAACATCACCCAACAATGCCTaGAAGAAAGGAAGTCTGCACGGAACCTGCATCTCC | + |
Preference number: 3 (lower is better) Translates to: SYSLSKTSPNNA*KKGSLHGTCIS Trigger: GGAGATGCAGGTTCCGTGCAGACTTCCTTTCTTCCAGGCATTGTTGGGTGATGTTTTACTTAAGGAATAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | GGTCTGAAGGTCACAAGCGGTACCAGATCATCGAGCTaGCAATCCTATTTTAAGGTAGCTTATATATGTTCA | + |
Preference number: 3 (lower is better) Translates to: GLKVTSGTRSSS*QSYFKVAYICS Trigger: TGAACATATATAAGCTACCTTAAAATAGGATTGGCAGCTCGATGATCTGGTACCGCTTGTGACCTTCAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR GCA 72 bp | GAACTTCTCTCCAGCTTTAAAAAGAATGTCCAAAGCTaGCATAAGGCTGGCTTGAAAGGTCATGTTCTTAGG | + |
Preference number: 3 (lower is better) Translates to: ELLSSFKKNVQS*HKAGLKGHVLR Trigger: CCTAAGAACATGACCTTTCAAGCCAGCCTTATGGCAGCTTTGGACATTCTTTTTAAAGCTGGAGAGAAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CAA 90 bp | ATGAGAGAAAATACTGCCGATTTGGGGGTTCCAGGGTTGATTAGTGTGACTGCACGTGTCAGAAATTCCTaGGCTCTGTTAATTTATACA | + |
Preference number: 3 (lower is better) Translates to: MRENTADLGVPGLISVTARVRNS*ALLIYT Trigger: TGTATAAATTAACAGAGCCAAGGAATTTCTGACACG...TGCAGTCACACTAATCAACCCTGGAACCCCCAAATCGGCAGTATTTTCTCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR-3UTR CAA 90 bp | TTCCTATCCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACACGATACTTATATCAATaGCAAGAGTTGCTAGGGATA | + |
Preference number: 3 (lower is better) Translates to: FLSLSSPVNGPLCSLLSTRYLYQ*QELLGI Trigger: TATCCCTAGCAACTCTTGCAATTGATATAAGTATCG...TGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGGATAGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | TCCCAAAGACCTTGCTTGCGGAGCCCTGGAAGGGGACTGGAGGTGAGAAGATTGCGGTGCAGGAGCACCTaGAGTCAGCCCCGGAGCTCA | + |
Preference number: 4 (lower is better) Translates to: SQRPCLRSPGRGLEVRRLRCRST*SQPRSS Trigger: TGAGCTCCGGGGCTGACTGCAGGTGCTCCTGCACCG...CAATCTTCTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | ACAATCCCATCTCAAAGAAAATCCTGGTGCCGAGAGCCCAGTCTACCCTCCCCTCTGAGCCAGCGCACGTaGCCTGGCTGTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: TIPSQRKSWCREPSLPSPLSQRT*PGCGLG Trigger: CCCCAGCCCACAGCCAGGCCACGTGCGCTGGCTCAG...AGGGGAGGGTAGACTGGGCTCTCGGCACCAGGATTTTCTTTGAGATGGGATTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | GTGGTGGTCAGCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAGACGCCGTGTCTTCCACGTaGTCTCCCGGTGCACAGAGA | + |
Preference number: 4 (lower is better) Translates to: VVVSWVGEAGCGYHCESDAVSST*SPGAQR Trigger: TCTCTGTGCACCGGGAGACCACGTGGAAGACACGGC...GTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGACCACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | CAGAGCCTGTTCCATCTTGGGGCCACCCACTCTGAGGACAAAGGCCTTACTCCTCACGTGGTCTCCCGGTaGACAGAGAGGTCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: QSLFHLGATHSEDKGLTPHVVSR*TERSAG Trigger: CCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTG...AGGAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCAAGATGGAACAGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | CAGAGCCTGTTCCATCTTGGGGCCACCCACTCTGAGGACAAAGGCCTTACTCCTTTGAGGCTGGGGCAGTaGCAGGGACAGCGGCTGCAT | + |
Preference number: 4 (lower is better) Translates to: QSLFHLGATHSEDKGLTPLRLGQ*QGQRLH Trigger: ATGCAGCCGCTGTCCCTGCCACTGCCCCAGCCTCAA...AGGAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCAAGATGGAACAGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | TCCCAAAGACCTTGCTTGCGGAGCCCTGGAAGGGGACTGGAGGTGAGAAGATTGTGGGTGCCTCCTGTCTaGCCTCCTGTCTGGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: SQRPCLRSPGRGLEVRRLWVPPV*PPVWPP Trigger: AGGAGGCCAGACAGGAGGCCAGACAGGAGGCACCCA...CAATCTTCTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTGCATGGACTGTCAGCGGCAGCCTTaGGTGCCTCCTGTCTGGCCT | + |
Preference number: 4 (lower is better) Translates to: SLAWNSEICLPLPPRCMDCQRQP*VPPVWP Trigger: AGGCCAGACAGGAGGCACCCAAGGCTGCCGCTGACA...GTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | GTGGTGGTCAGCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAGACGGGGTATTCTGCCCTTaGTGCTCTCCTTCCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: VVVSWVGEAGCGYHCESDGVFCP*CSPSSA Trigger: AGCTGAGGAAGGAGAGCATCAAGGGCAGAATACCCC...GTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGACCACCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | GTGACCTTCTGGAATGTGGTTAGACAGAAGAGCAGGAGAGCACAGGGGCTGCCCGGCTCAGGTTGGCCTTaGTGCTCTCCTCCAGCGTAT | + |
Preference number: 4 (lower is better) Translates to: VTFWNVVRQKSRRAQGLPGSGWP*CSPPAY Trigger: ATACGCTGGAGGAGAGCATCAAGGCCAACCTGAGCC...GGGCAGCCCCTGTGCTCTCCTGCTCTTCTGTCTAACCACATTCCAGAAGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | CAGAGCCTGTTCCATCTTGGGGCCACCCACTCTGAGGACAAAGGCCTTACTCCTGGCCTCCTGTCTGCCTaGCTTGTAGTAGGTGAAGCC | + |
Preference number: 4 (lower is better) Translates to: QSLFHLGATHSEDKGLTPGLLSA*LVVGEA Trigger: GGCTTCACCTACTACAAGGCAGGCAGACAGGAGGCC...AGGAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCAAGATGGAACAGGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | GTGGTGGTCAGCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAGACCCCTGGTACACAACATaGCCTGTGCCTATCCAGTTG | + |
Preference number: 4 (lower is better) Translates to: VVVSWVGEAGCGYHCESDPWYTT*PVPIQL Trigger: CAACTGGATAGGCACAGGCCATGTTGTGTACCAGGG...GTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGACCACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTGCATGGACAGTGGAGAGTGTAAGTaGGCTGGTGGCCATTGTCCC | + |
Preference number: 4 (lower is better) Translates to: SLAWNSEICLPLPPRCMDSGECK*AGGHCP Trigger: GGGACAATGGCCACCAGCTCACTTACACTCTCCACT...GTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | ACAATCCCATCTCAAAGAAAATCCTGGTGCCGAGAGCCCAGTCTACCCTCCCCTCACTTCGCACCCGGCTaGATGCATCCTTGCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: TIPSQRKSWCREPSLPSPHFAPG*MHPCSA Trigger: CGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTG...AGGGGAGGGTAGACTGGGCTCTCGGCACCAGGATTTTCTTTGAGATGGGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | TGTGTGGTAGTGGGAAGCCAGGTTTCCTTTAGAGCTCACCAATCAGCAGATTCCGCGGCTGCATCCCTCTaGAGCAACTGGAGGCCCAGG | + |
Preference number: 4 (lower is better) Translates to: CVVVGSQVSFRAHQSADSAAASL*SNWRPR Trigger: CCTGGGCCTCCAGTTGCTGCAGAGGGATGCAGCCGC...GGAATCTGCTGATTGGTGAGCTCTAAAGGAAACCTGGCTTCCCACTACCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTGCATGGACCTGGGGACTTCTGGATaGAAAGGTGGCTCAGTAGGC | + |
Preference number: 4 (lower is better) Translates to: SLAWNSEICLPLPPRCMDLGTSG*KGGSVG Trigger: GCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAG...GTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | GTGAACAGAATAGCGTTGAAGGCCCAGAAAATACCCCAGGCCCAAGGCTTTGAGGTGCACAGAGAGGTCTaGTGGGTCCAGGCGGCTCAA | + |
Preference number: 4 (lower is better) Translates to: VNRIALKAQKIPQAQGFEVHREV*WVQAAQ Trigger: TTGAGCCGCCTGGACCCAGCAGACCTCTCTGTGCAC...CTCAAAGCCTTGGGCCTGGGGTATTTTCTGGGCCTTCAACGCTATTCTGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | TTCCTATCCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACACTCACAGGGGTTGAGTaGGGAGGGCGGGGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: FLSLSSPVNGPLCSLLSTLTGVE*GGRGGA Trigger: TGCACCGCCCCGCCCTCCTCACTCAACCCCTGTGAG...TGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGGATAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | AGTCTGGCCTGGAACTCAGAAATCTGTCTGCCTCTGCCTCCCAGGTGCATGGACTGCTGCCATATTTGTTaGGATCTCTGCCTTGCCCTC | + |
Preference number: 4 (lower is better) Translates to: SLAWNSEICLPLPPRCMDCCHIC*DLCLAL Trigger: GAGGGCAAGGCAGAGATCTCAACAAATATGGCAGCA...GTCCATGCACCTGGGAGGCAGAGGCAGACAGATTTCTGAGTTCCAGGCCAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | GTGGTGGTCAGCTGGGTGGGGGAAGCTGGATGTGGCTACCACTGTGAGTCAGACTATAGGAATACTCATTaGGGAAGGGCAACTGTGGGT | + |
Preference number: 4 (lower is better) Translates to: VVVSWVGEAGCGYHCESDYRNTH*GRATVG Trigger: ACCCACAGTTGCCCTTCCTCAATGAGTATTCCTATA...GTCTGACTCACAGTGGTAGCCACATCCAGCTTCCCCCACCCAGCTGACCACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCGAAGCCTCGGATCACTaGCTGCTGCTGAGCCAGCGC | + |
Preference number: 4 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVEASDH*LLLSQR Trigger: GCGCTGGCTCAGCAGCAGGCAGTGATCCGAGGCTTC...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | CTTTTGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCAAAGGAGATCAGCTGTAGCGGCAGCCTTGGGTaGCTCCTGTCTGGCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LLQAELSQYRALPKEISCSGSLG*LLSGLL Trigger: CAGGAGGCCAGACAGGAGGCACCCAAGGCTGCCGCT...ACAGCTGATCTCCTTTGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | ATGAGAGAAAATACTGCCGATTTGGGGGTTCCAGGGTTGATTAGTGTGACTGCACCAGCGCACGTGGCCTaGCTGTGGGCTGGGGTATTC | + |
Preference number: 4 (lower is better) Translates to: MRENTADLGVPGLISVTAPAHVA*LWAGVF Trigger: GAATACCCCAGCCCACAGCCAGGCCACGTGCGCTGG...TGCAGTCACACTAATCAACCCTGGAACCCCCAAATCGGCAGTATTTTCTCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | ACAATCCCATCTCAAAGAAAATCCTGGTGCCGAGAGCCCAGTCTACCCTCCCCTTGCCAGGCCCTTGTCTaGGAAGCTCTTCTGTATGCT | + |
Preference number: 4 (lower is better) Translates to: TIPSQRKSWCREPSLPSPCQALV*EALLYA Trigger: AGCATACAGAAGAGCTTCTCAGACAAGGGCCTGGCA...AGGGGAGGGTAGACTGGGCTCTCGGCACCAGGATTTTCTTTGAGATGGGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCTCCCTCTGCAGCAACTaGAGGCCCAGGCTAGACAGC | + |
Preference number: 4 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVSLCSN*RPRLDS Trigger: GCTGTCTAGCCTGGGCCTCCAGTTGCTGCAGAGGGA...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | ATGAGAGAAAATACTGCCGATTTGGGGGTTCCAGGGTTGATTAGTGTGACTGCAGGCCTGGCTGTGGGCTaGGGTATTCTGCCCTTGATG | + |
Preference number: 4 (lower is better) Translates to: MRENTADLGVPGLISVTAGLAVG*GILPLM Trigger: CATCAAGGGCAGAATACCCCAGCCCACAGCCAGGCC...TGCAGTCACACTAATCAACCCTGGAACCCCCAAATCGGCAGTATTTTCTCTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | TATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGCCGACCTCCAGCTGTGTCCTaGGCCTTGCTGTCGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: YMFTCVSTIPSQRKSWCRPPAVS*ALLSGL Trigger: AAGCCCCGACAGCAAGGCTCAGGACACAGCTGGAGG...TCGGCACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCGAGGAAGGGCAACTGTaGGTGAGCATCAGTGCCAGT | + |
Preference number: 4 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVEEGQL*VSISAS Trigger: ACTGGCACTGATGCTCACCCACAGTTGCCCTTCCTC...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | TTGCTTTTGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCAAAGGAGATCAGCCTGCCTTGTAGTAGGTaGAGCCTCGGATCACTGCCT | + |
Preference number: 4 (lower is better) Translates to: LLLQAELSQYRALPKEISLPCSR*SLGSLP Trigger: AGGCAGTGATCCGAGGCTTCACCTACTACAAGGCAG...GCTGATCTCCTTTGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | TATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGCCGACCACAGCTGGGTAGATaGCCCACAGGCCGCTCTCAT | + |
Preference number: 4 (lower is better) Translates to: YMFTCVSTIPSQRKSWCRPQLGR*PTGRSH Trigger: ATGAGAGCGGCCTGTGGGTCATCTACCCAGCTGTGG...TCGGCACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | TTCCTATCCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAAAGGGCAACTGTGGGTaGGCATCAGTGCCAGTGTGG | + |
Preference number: 4 (lower is better) Translates to: FLSLSSPVNGPLCSLLSTKGNCG*ASVPVW Trigger: CCACACTGGCACTGATGCTCACCCACAGTTGCCCTT...TGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGGATAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | TTATATCAATTGCAAGAGTTGCTAGGGATAGCCCTTTCTCCTCTGCTGCTCTCCCCTCCTTCTGAAGCCTaGAGCCGGACGTCATCATGT | + |
Preference number: 4 (lower is better) Translates to: LYQLQELLGIALSPLLLSPPSEA*SRTSSC Trigger: ACATGATGACGTCCGGCTGCAGGCTTCAGAAGGAGG...GGAGAGCAGCAGAGGAGAAAGGGCTATCCCTAGCAACTCTTGCAATTGATATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | TTCCTATCCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGTGGGTGAGCATCAGTaGCAGTGTGGGTGTCGAACG | + |
Preference number: 4 (lower is better) Translates to: FLSLSSPVNGPLCSLLSTVGEHQ*QCGCRT Trigger: CGTTCGACACCCACACTGGCACTGATGCTCACCCAC...TGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGGATAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | ATTAAGATCAACAAAGGAGACAGAGCCTGTTCCATCTaGGGGCCACCCACTCTGAGGACAAAGGCCTTACTC | + |
Preference number: 4 (lower is better) Translates to: IKINKGDRACSI*GPPTLRTKALL Trigger: GAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCAAGATGGAACAGGCTCTGTCTCCTTTGTTGATCTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | TCAGCAGTAGACACCTTCAAGGGTACTGGGGATCAGTaGCTTTTGCAGGCAGAACTGTCTCAGTATAGGGCT | + |
Preference number: 4 (lower is better) Translates to: SAVDTFKGTGDQ*LLQAELSQYRA Trigger: AGCCCTATACTGAGACAGTTCTGCCTGCAAAAGCAACTGATCCCCAGTACCCTTGAAGGTGTCTACTGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | GCCAGAGCTGAGCTGCCTATACCTTCTCATCTGCTGCAAAATGTGCAAGGAACAACACAACATGGCCTGTaGCTATCCAGTTGTAGGGTA | + |
Preference number: 4 (lower is better) Translates to: ARAELPIPSHLLQNVQGTTQHGL*LSSCRV Trigger: TACCCTACAACTGGATAGGCACAGGCCATGTTGTGT...TGTTCCTTGCACATTTTGCAGCAGATGAGAAGGTATAGGCAGCTCAGCTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | GACACCCCCAAACGATACTTATATCAATTGCAAGAGTaGCTAGGGATAGCCCTTTCTCCTCTGCTGCTCTCC | + |
Preference number: 4 (lower is better) Translates to: DTPKRYLYQLQE*LGIALSPLLLS Trigger: GGAGAGCAGCAGAGGAGAAAGGGCTATCCCTAGCAACTCTTGCAATTGATATAAGTATCGTTTGGGGGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | CTAGCCCAGGACACCCCCAAACGATACTTATATCAATaGCAAGAGTTGCTAGGGATAGCCCTTTCTCCTCTG | + |
Preference number: 4 (lower is better) Translates to: LAQDTPKRYLYQ*QELLGIALSPL Trigger: CAGAGGAGAAAGGGCTATCCCTAGCAACTCTTGCAATTGATATAAGTATCGTTTGGGGGTGTCCTGGGCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | GAGGACATAGCCTACTCCAGCTGGAATGCTGCTCCTTaGGGCTTTAGTCACTTCATCTACTCAACAGGCTTA | + |
Preference number: 4 (lower is better) Translates to: EDIAYSSWNAAP*GFSHFIYSTGL Trigger: TAAGCCTGTTGAGTAGATGAAGTGACTAAAGCCCAAAGGAGCAGCATTCCAGCTGGAGTAGGCTATGTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | GTAGACACCTTCAAGGGTACTGGGGATCAGTTGCTTTaGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCA | + |
Preference number: 4 (lower is better) Translates to: VDTFKGTGDQLL*QAELSQYRALP Trigger: TGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAGCAACTGATCCCCAGTACCCTTGAAGGTGTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | TTCCTATCCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACATCCAGCGTATTCATCTaGGAGGCCACCTTCTGGATG | + |
Preference number: 4 (lower is better) Translates to: FLSLSSPVNGPLCSLLSTSSVFI*EATFWM Trigger: CATCCAGAAGGTGGCCTCCCAGATGAATACGCTGGA...TGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGGATAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | ATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCAACAATGCCTGGAAGCCTCCCGACCTTGGCTaGGGACTTCTGGATGCAAAG | + |
Preference number: 4 (lower is better) Translates to: ISGVSYSLSKTSPNNAWKPPDLG*GLLDAK Trigger: CTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGG...CTTCCAGGCATTGTTGGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCCGTAGTAGTAGTTGGTaGCATAGATCCTGTCATCAA | + |
Preference number: 4 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVRSSSW*HRSCHQ Trigger: TTGATGACAGGATCTATGTCACCAACTACTACTACG...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | ATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCAACAATGCCTGGAAGCCTGTCATCAAGAGCTaGAGGGTCCTTCATCCAGGC | + |
Preference number: 4 (lower is better) Translates to: ISGVSYSLSKTSPNNAWKPVIKS*RVLHPG Trigger: GCCTGGATGAAGGACCCTGCAGCTCTTGATGACAGG...CTTCCAGGCATTGTTGGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR GCA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCAACACAATCACCTCATaGTGTGTTTCGTCATGCTCA | + |
Preference number: 4 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVNTITS*CVSSCS Trigger: TGAGCATGACGAAACACAGCATGAGGTGATTGTGTT...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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3UTR CAA 72 bp | ATCTTGAATGACTGCAACTACCAGTTCTTTTGGGGCTaGTTACCAGCACGGCACAAAGATAGCAGGAAACAT | + |
Preference number: 4 (lower is better) Translates to: ILNDCNYQFFWG*LPARHKDSRKH Trigger: ATGTTTCCTGCTATCTTTGTGCCGTGCTGGTAACAAGCCCCAAAAGAACTGGTAGTTGCAGTCATTCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | TCACTGTCCCTCTTTATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCAGTTGCTCACTGAGGTaGTGTACGCTGTCTTTCACC | + |
Preference number: 4 (lower is better) Translates to: SLSLFISGVSYSLSKTSPSCSLR*CTLSFT Trigger: GGTGAAAGACAGCGTACACCACCTCAGTGAGCAACT...GGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAATAAAGAGGGACAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | CCATTTAAAAATGAGGAAATGAACTATGTTTACCATACAGCACACAAAGGCCTGGCCACTTCCAGGGTGTaGTGTCCTCATAGACCACAT | + |
Preference number: 4 (lower is better) Translates to: PFKNEEMNYVYHTAHKGLATSRV*CPHRPH Trigger: ATGTGGTCTATGAGGACACCACACCCTGGAAGTGGC...CAGGCCTTTGTGTGCTGTATGGTAAACATAGTTCATTTCCTCATTTTTAAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CCA 90 bp | CCATTTAAAAATGAGGAAATGAACTATGTTTACCATACAGCACACAAAGGCCTGAAATCAATGTCCGAGTaGCCACGCCACTTCCAGGGT | + |
Preference number: 4 (lower is better) Translates to: PFKNEEMNYVYHTAHKGLKSMSE*PRHFQG Trigger: ACCCTGGAAGTGGCGTGGCCACTCGGACATTGATTT...CAGGCCTTTGTGTGCTGTATGGTAAACATAGTTCATTTCCTCATTTTTAAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR TCA 90 bp | TCACTGTCCCTCTTTATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCTCCATCGGCCTTGTTTaGAATTTTCCAGGTTTCGAA | + |
Preference number: 4 (lower is better) Translates to: SLSLFISGVSYSLSKTSPSIGLV*NFPGFE Trigger: TTCGAAACCTGGAAAATTTCAAACAAGGCCGATGGA...GGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAATAAAGAGGGACAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | GGCCTCCTGTCTGCCTGCCTTGTAGTAGGTGAAGCCTCGGATCACTaGCTGCTGCTGAGCCAGCGCACGTGGCCTGGCTGTGGGCTGGGG | + |
Preference number: 5 (lower is better) Translates to: GLLSACLVVGEASDH*LLLSQRTWPGCGLG Trigger: CCCCAGCCCACAGCCAGGCCACGTGCGCTGGCTCAGCAGCAGGCAGTGATCCGAGGCTTCACCTACTACAAGGCAGGCAGACAGGAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | CAGCTGTGTCCTGAGCCTTGCTGTCGGGGCTTGAGGCTGGGGCAGTaGCAGGGACAGCGGCTGCATCCCTCTGCAGCAACTGGAGGCCCA | + |
Preference number: 5 (lower is better) Translates to: QLCPEPCCRGLRLGQ*QGQRLHPSAATGGP Trigger: TGGGCCTCCAGTTGCTGCAGAGGGATGCAGCCGCTGTCCCTGCCACTGCCCCAGCCTCAAGCCCCGACAGCAAGGCTCAGGACACAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | GGGCTTGAGGCTGGGGCAGTGGCAGGGACAGCGGCTGCATCCCTCTaGAGCAACTGGAGGCCCAGGCTAGACAGCTCCTTCTTGATGCTC | + |
Preference number: 5 (lower is better) Translates to: GLEAGAVAGTAAASL*SNWRPRLDSSFLML Trigger: GAGCATCAAGAAGGAGCTGTCTAGCCTGGGCCTCCAGTTGCTGCAGAGGGATGCAGCCGCTGTCCCTGCCACTGCCCCAGCCTCAAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | AGCCCCGGAGCTCACTGTCTCCACAGTGTAGAAGTCCTCTACTCGTaGTCGCCCACTTCGCACCCGGCTGCATGCATCCTTGCTCAGCGG | + |
Preference number: 5 (lower is better) Translates to: SPGAHCLHSVEVLYS*SPTSHPAACILAQR Trigger: CCGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTGGGCGAGCACGAGTAGAGGACTTCTACACTGTGGAGACAGTGAGCTCCGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | GTGCCCTCACAGCTGTCCTCCCGACCTTGGCTGGGGACTTCTGGATaGAAAGGTGGCTCAGTAGGCCAGGGAGTGGTGATAGGGCTTGGG | + |
Preference number: 5 (lower is better) Translates to: VPSQLSSRPWLGTSG*KGGSVGQGVVIGLG Trigger: CCCAAGCCCTATCACCACTCCCTGGCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTGTGAGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | GTAGGTGAAGCCTCGGATCACTGCCTGCTGCTGAGCCAGCGCACGTaGCCTGGCTGTGGGCTGGGGTATTCTGCCCTTGATGCTCTCCTT | + |
Preference number: 5 (lower is better) Translates to: VGEASDHCLLLSQRT*PGCGLGYSALDALL Trigger: AAGGAGAGCATCAAGGGCAGAATACCCCAGCCCACAGCCAGGCCACGTGCGCTGGCTCAGCAGCAGGCAGTGATCCGAGGCTTCACCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | TCCCAAAGACCTTGCTTGCGGAGCCCTGGAAGGGGACTGGAGGTGAGAAGATTGCCTTGCTGTCGGGGCTaGAGGCTGGGGCAGTGGCAG | + |
Preference number: 5 (lower is better) Translates to: SQRPCLRSPGRGLEVRRLPCCRG*RLGQWQ Trigger: CTGCCACTGCCCCAGCCTCAAGCCCCGACAGCAAGG...CAATCTTCTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | GCCCACTTCGCACCCGGCTGCATGCATCCTTGCTCAGCGGTCGCATaGTGCATTTGCAGCGGCAGTCAGAGCCCTCTGAGGTCATCCGAA | + |
Preference number: 5 (lower is better) Translates to: AHFAPGCMHPCSAVA*CICSGSQSPLRSSE Trigger: TTCGGATGACCTCAGAGGGCTCTGACTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | CCTGCTTCTTCAGTTTCTCCATCTTCCACTCGTTCTCACAGGGGTTaGGTGAGGAGGGCGGGGCGGTGCAGGAGCACCTGCAGTCAGCCC | + |
Preference number: 5 (lower is better) Translates to: PASSVSPSSTRSHRG*VRRAGRCRSTCSQP Trigger: GGGCTGACTGCAGGTGCTCCTGCACCGCCCCGCCCTCCTCACTCAACCCCTGTGAGAACGAGTGGAAGATGGAGAAACTGAAGAAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | GCTGGGGCAGTGGCAGGGACAGCGGCTGCATCCCTCTGCAGCAACTaGAGGCCCAGGCTAGACAGCTCCTTCTTGATGCTCATCATGATG | + |
Preference number: 5 (lower is better) Translates to: AGAVAGTAAASLCSN*RPRLDSSFLMLIMM Trigger: CATCATGATGAGCATCAAGAAGGAGCTGTCTAGCCTGGGCCTCCAGTTGCTGCAGAGGGATGCAGCCGCTGTCCCTGCCACTGCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | ACAGCTGTCCTCCCGACCTTGGCTGGGGACTTCTGGATGCAAAGGTaGCTCAGTAGGCCAGGGAGTGGTGATAGGGCTTGGGGTGGTGGT | + |
Preference number: 5 (lower is better) Translates to: TAVLPTLAGDFWMQR*LSRPGSGDRAWGGG Trigger: ACCACCACCCCAAGCCCTATCACCACTCCCTGGCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | GGATCCACAGCTCTGAGTGTGCCCTCACAGCTGTCCTCCCGACCTTaGCTGGGGACTTCTGGATGCAAAGGTGGCTCAGTAGGCCAGGGA | + |
Preference number: 5 (lower is better) Translates to: GSTALSVPSQLSSRP*LGTSGCKGGSVGQG Trigger: TCCCTGGCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTGTGAGGGCACACTCAGAGCTGTGGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | GAAAGCAGTTCCCATAGGAGTTCCTCCTCAGCCGTGTCTTCCACGTaGTCTCCCGGTGCACAGAGAGGTCTGCTGGGTCCAGGCGGCTCA | + |
Preference number: 5 (lower is better) Translates to: ESSSHRSSSSAVSST*SPGAQRGLLGPGGS Trigger: TGAGCCGCCTGGACCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTGGAAGACACGGCTGAGGAGGAACTCCTATGGGAACTGCTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | CTGCCATATTTGTTGAGATCTCTGCCTTGCCCTCCAGCTGTGTCCTaGGCCTTGCTGTCGGGGCTTGAGGCTGGGGCAGTGGCAGGGACA | + |
Preference number: 5 (lower is better) Translates to: LPYLLRSLPCPPAVS*ALLSGLEAGAVAGT Trigger: TGTCCCTGCCACTGCCCCAGCCTCAAGCCCCGACAGCAAGGCTCAGGACACAGCTGGAGGGCAAGGCAGAGATCTCAACAAATATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | GAGCCAGCGCACGTGGCCTGGCTGTGGGCTGGGGTATTCTGCCCTTaGTGCTCTCCTTCCTCAGCTTCTCCACTTTCAGCAGCTTCTCCT | + |
Preference number: 5 (lower is better) Translates to: EPAHVAWLWAGVFCP*CSPSSASPLSAASP Trigger: AGGAGAAGCTGCTGAAAGTGGAGAAGCTGAGGAAGGAGAGCATCAAGGGCAGAATACCCCAGCCCACAGCCAGGCCACGTGCGCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | TGGCCTCTATCTTGGGTGGTAGCTTCTCCAGCCAGGAAGTTCCTTTaGGGGTGCTGTCAGCGGCAGCCTTGGGTGCCTCCTGTCTGGCCT | + |
Preference number: 5 (lower is better) Translates to: WPLSWVVASPARKFL*GCCQRQPWVPPVWP Trigger: AGGCCAGACAGGAGGCACCCAAGGCTGCCGCTGACAGCACCCTCAAAGGAACTTCCTGGCTGGAGAAGCTACCACCCAAGATAGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | CATGGCGCCCATAACTGTGGTGTTTCACAGGGGGATCCACAGCTCTaGGTGTGCCCTCACAGCTGTCCTCCCGACCTTGGCTGGGGACTT | + |
Preference number: 5 (lower is better) Translates to: HGAHNCGVSQGDPQL*VCPHSCPPDLGWGL Trigger: AAGTCCCCAGCCAAGGTCGGGAGGACAGCTGTGAGGGCACACTCAGAGCTGTGGATCCCCCTGTGAAACACCACAGTTATGGGCGCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | GTAGAAGTCCTCTACTCGTGCTCGCCCACTTCGCACCCGGCTGCATaGATCCTTGCTCAGCGGTCGCATGATGCATTTGCAGCGGCAGTC | + |
Preference number: 5 (lower is better) Translates to: VEVLYSCSPTSHPAA*ILAQRSHDAFAAAV Trigger: GACTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTGGGCGAGCACGAGTAGAGGACTTCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | CCTCAGCCGTGTCTTCCACGTGGTCTCCCGGTGCACAGAGAGGTCTaGTGGGTCCAGGCGGCTCAACACAATCACCTCATGCTGTGTTTC | + |
Preference number: 5 (lower is better) Translates to: PQPCLPRGLPVHREV*WVQAAQHNHLMLCF Trigger: GAAACACAGCATGAGGTGATTGTGTTGAGCCGCCTGGACCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTGGAAGACACGGCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | CAGCCGTGTCTTCCACGTGGTCTCCCGGTGCACAGAGAGGTCTGCTaGGTCCAGGCGGCTCAACACAATCACCTCATGCTGTGTTTCGTC | + |
Preference number: 5 (lower is better) Translates to: QPCLPRGLPVHREVC*VQAAQHNHLMLCFV Trigger: GACGAAACACAGCATGAGGTGATTGTGTTGAGCCGCCTGGACCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTGGAAGACACGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | CAGAGCCTGTTCCATCTTGGGGCCACCCACTCTGAGGACAAAGGCCTTACTCCTGCTGTCCTCCCGACCTaGGCTGGGGACTTCTGGATG | + |
Preference number: 5 (lower is better) Translates to: QSLFHLGATHSEDKGLTPAVLPT*AGDFWM Trigger: CATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGC...AGGAGTAAGGCCTTTGTCCTCAGAGTGGGTGGCCCCAAGATGGAACAGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | GGCAGTCAGAGCCCTCTGAGGTCATCCGAACCTGGTCCAGGTCACTaGATACCTTACTGTCGGGCCACACAGGACCAGCCCGAAGCAAAA | + |
Preference number: 5 (lower is better) Translates to: GSQSPLRSSEPGPGH*IPYCRATQDQPEAK Trigger: TTTTGCTTCGGGCTGGTCCTGTGTGGCCCGACAGTAAGGTATTCAGTGACCTGGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | GTGACCTTCTGGAATGTGGTTAGACAGAAGAGCAGGAGAGCACAGGGGCTGCCCTTCTCCAGGCTCAGGTaGGCCTTGATGCTCTCCTCC | + |
Preference number: 5 (lower is better) Translates to: VTFWNVVRQKSRRAQGLPFSRLR*ALMLSS Trigger: GGAGGAGAGCATCAAGGCCAACCTGAGCCTGGAGAA...GGGCAGCCCCTGTGCTCTCCTGCTCTTCTGTCTAACCACATTCCAGAAGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | GCTCAGCGGTCGCATGATGCATTTGCAGCGGCAGTCAGAGCCCTCTaGGGTCATCCGAACCTGGTCCAGGTCACTGAATACCTTACTGTC | + |
Preference number: 5 (lower is better) Translates to: AQRSHDAFAAAVRAL*GHPNLVQVTEYLTV Trigger: GACAGTAAGGTATTCAGTGACCTGGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCCGCTGCAAATGCATCATGCGACCGCTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 90 bp | CCACCTGGCCTTCATGCTGGTTGTAAGTGTCCACGGTGTAGAGGATaGCGCACACCAGAAAGCAGTTCCCATAGGAGTTCCTCCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: PPGLHAGCKCPRCRG*RTPESSSHRSSSSA Trigger: GGCTGAGGAGGAACTCCTATGGGAACTGCTTTCTGGTGTGCGGCATCCTCTACACCGTGGACACTTACAACCAGCATGAAGGCCAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | TTATATCAATTGCAAGAGTTGCTAGGGATAGCCCTTTCTCCTCTGCTGCTCTCCCTGTCAGCGGCAGCCTaGGGTGCCTCCTGTCTGGCC | + |
Preference number: 5 (lower is better) Translates to: LYQLQELLGIALSPLLLSLSAAA*GASCLA Trigger: GGCCAGACAGGAGGCACCCAAGGCTGCCGCTGACAG...GGAGAGCAGCAGAGGAGAAAGGGCTATCCCTAGCAACTCTTGCAATTGATATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 90 bp | GTCAACCTGGGTGGTATAGGAATACTCATTGAGGAAGGGCAACTGTaGGTGAGCATCAGTGCCAGTGTGGGTGTCGAACGCATAGGCCAC | + |
Preference number: 5 (lower is better) Translates to: VNLGGIGILIEEGQL*VSISASVGVERIGH Trigger: GTGGCCTATGCGTTCGACACCCACACTGGCACTGATGCTCACCCACAGTTGCCCTTCCTCAATGAGTATTCCTATACCACCCAGGTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | TCACCTCATGCTGTGTTTCGTCATGCTCATCCACAGCTGGGTAGATaGCCCACAGGCCGCTCTCATCCACGGCAAAATCAATGTCCGAGT | + |
Preference number: 5 (lower is better) Translates to: SPHAVFRHAHPQLGR*PTGRSHPRQNQCPS Trigger: ACTCGGACATTGATTTTGCCGTGGATGAGAGCGGCCTGTGGGTCATCTACCCAGCTGTGGATGAGCATGACGAAACACAGCATGAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 90 bp | GAGGCCCAGGCTAGACAGCTCCTTCTTGATGCTCATCATGATGGCTaGCTGGTTCTCATAGCTCTTCAGTTGCTCACTGAGGTGGTGTAC | + |
Preference number: 5 (lower is better) Translates to: EAQARQLLLDAHHDG*LVLIALQLLTEVVY Trigger: GTACACCACCTCAGTGAGCAACTGAAGAGCTATGAGAACCAGTCAGCCATCATGATGAGCATCAAGAAGGAGCTGTCTAGCCTGGGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCAGGCTCAGGTTGGCCTaGATGCTCTCCTCCAGCGTA | + |
Preference number: 5 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVRLRLA*MLSSSV Trigger: TACGCTGGAGGAGAGCATCAAGGCCAACCTGAGCCT...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | TCCCAAAGACCTTGCTTGCGGAGCCCTGGAAGGGGACTGGAGGTGAGAAGATTGTGTATGCTGCCATATTaGTTGAGATCTCTGCCTTGC | + |
Preference number: 5 (lower is better) Translates to: SQRPCLRSPGRGLEVRRLCMLPY*LRSLPC Trigger: GCAAGGCAGAGATCTCAACAAATATGGCAGCATACA...CAATCTTCTCACCTCCAGTCCCCTTCCAGGGCTCCGCAAGCAAGGTCTTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | CCTTGTCCTCACCTGTCAATGGGCCTCTTTGTAGTTTACTTTCCACAGCATGTCAGCCAGGAAGTTCCTTaGAGGGTGCTGTCAGCGGCA | + |
Preference number: 5 (lower is better) Translates to: PCPHLSMGLFVVYFPQHVSQEVP*RVLSAA Trigger: TGCCGCTGACAGCACCCTCAAAGGAACTTCCTGGCT...GACATGCTGTGGAAAGTAAACTACAAAGAGGCCCATTGACAGGTGAGGACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | TTGCTTTTGCAGGCAGAACTGTCTCAGTATAGGGCTTTACCAAAGGAGATCAGCAGTTTGGCCTCTATCTaGGGTGGTAGCTTCTCCAGC | + |
Preference number: 5 (lower is better) Translates to: LLLQAELSQYRALPKEISSLASI*GGSFSS Trigger: GCTGGAGAAGCTACCACCCAAGATAGAGGCCAAACT...GCTGATCTCCTTTGGTAAAGCCCTATACTGAGACAGTTCTGCCTGCAAAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | GCTTATATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGGTCGCATGATGCATTaGCAGCGGCAGTCAGAGCCC | + |
Preference number: 5 (lower is better) Translates to: AYICSLVCPQSHLKENPGGRMMH*QRQSEP Trigger: GGGCTCTGACTGCCGCTGCAAATGCATCATGCGACC...ACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATATAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | GCTTATATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTACCATAGACTGCAGCTaGAGGAGCTCAGGTGCCTGC | + |
Preference number: 5 (lower is better) Translates to: AYICSLVCPQSHLKENPGTIDCS*RSSGAC Trigger: GCAGGCACCTGAGCTCCTCAAGCTGCAGTCTATGGT...ACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | GCTTATATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTGTTGAGATCTCTGCCTaGCCCTCCAGCTGTGTCCTG | + |
Preference number: 5 (lower is better) Translates to: AYICSLVCPQSHLKENPGVEISA*PSSCVL Trigger: CAGGACACAGCTGGAGGGCAAGGCAGAGATCTCAAC...ACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | ATGAGAGAAAATACTGCCGATTTGGGGGTTCCAGGGTTGATTAGTGTGACTGCAATGCTGCCATATTTGTaGAGATCTCTGCCTTGCCCT | + |
Preference number: 5 (lower is better) Translates to: MRENTADLGVPGLISVTAMLPYL*RSLPCP Trigger: AGGGCAAGGCAGAGATCTCAACAAATATGGCAGCAT...TGCAGTCACACTAATCAACCCTGGAACCCCCAAATCGGCAGTATTTTCTCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | GCCAGAGCTGAGCTGCCTATACCTTCTCATCTGCTGCAAAATGTGCAAGGAACATGGCGCAGGTCATATTaGATGATATTCTTGGTGAAG | + |
Preference number: 5 (lower is better) Translates to: ARAELPIPSHLLQNVQGTWRRSY*MIFLVK Trigger: CTTCACCAAGAATATCATCAAATATGACCTGCGCCA...TGTTCCTTGCACATTTTGCAGCAGATGAGAAGGTATAGGCAGCTCAGCTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | TCACTGTCCCTCTTTATTTCAGGAGTGAGTTATTCCTTAAGTAAAACATCACCCCTAGACAGCTCCTTCTaGATGCTCATCATGATGGCT | + |
Preference number: 5 (lower is better) Translates to: SLSLFISGVSYSLSKTSPLDSSF*MLIMMA Trigger: AGCCATCATGATGAGCATCAAGAAGGAGCTGTCTAG...GGGTGATGTTTTACTTAAGGAATAACTCACTCCTGAAATAAAGAGGGACAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS-3UTR CAA 90 bp | GCTTATATATGTTCACTTGTGTGTCCACAATCCCATCTCAAAGAAAATCCTGGTCTCCATCGGCCTTGTTaGAAATTTTCCAGGTTTCGA | + |
Preference number: 5 (lower is better) Translates to: AYICSLVCPQSHLKENPGLHRPC*KFSRFR Trigger: TCGAAACCTGGAAAATTTCAAACAAGGCCGATGGAG...ACCAGGATTTTCTTTGAGATGGGATTGTGGACACACAAGTGAACATATATAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | CCTGAGCCTTGCTGTCGGGGCTTGAGGCTGGGGCAGTaGCAGGGACAGCGGCTGCATCCCTCTGCAGCAACT | + |
Preference number: 6 (lower is better) Translates to: PEPCCRGLRLGQ*QGQRLHPSAAT Trigger: AGTTGCTGCAGAGGGATGCAGCCGCTGTCCCTGCCACTGCCCCAGCCTCAAGCCCCGACAGCAAGGCTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | GCCTCGGATCACTGCCTGCTGCTGAGCCAGCGCACGTaGCCTGGCTGTGGGCTGGGGTATTCTGCCCTTGAT | + |
Preference number: 6 (lower is better) Translates to: ASDHCLLLSQRT*PGCGLGYSALD Trigger: ATCAAGGGCAGAATACCCCAGCCCACAGCCAGGCCACGTGCGCTGGCTCAGCAGCAGGCAGTGATCCGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | CGTGCTCGCCCACTTCGCACCCGGCTGCATGCATCCTaGCTCAGCGGTCGCATGATGCATTTGCAGCGGCAG | + |
Preference number: 6 (lower is better) Translates to: RARPLRTRLHAS*LSGRMMHLQRQ Trigger: CTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTGGGCGAGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | CAGGAAGTTCCTTTGAGGGTGCTGTCAGCGGCAGCCTaGGGTGCCTCCTGTCTGGCCTCCTGTCTGGCCTCC | + |
Preference number: 6 (lower is better) Translates to: QEVPLRVLSAAA*GASCLASCLAS Trigger: GGAGGCCAGACAGGAGGCCAGACAGGAGGCACCCAAGGCTGCCGCTGACAGCACCCTCAAAGGAACTTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 90 bp | CGCACCCGGCTGCATGCATCCTTGCTCAGCGGTCGCATGATGCATTaGCAGCGGCAGTCAGAGCCCTCTGAGGTCATCCGAACCTGGTCC | + |
Preference number: 6 (lower is better) Translates to: RTRLHASLLSGRMMH*QRQSEPSEVIRTWS Trigger: GGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 90 bp | TCCTCTACTCGTGCTCGCCCACTTCGCACCCGGCTGCATGCATCCTaGCTCAGCGGTCGCATGATGCATTTGCAGCGGCAGTCAGAGCCC | + |
Preference number: 6 (lower is better) Translates to: SSTRARPLRTRLHAS*LSGRMMHLQRQSEP Trigger: GGGCTCTGACTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTGGGCGAGCACGAGTAGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | GCACCCGGCTGCATGCATCCTTGCTCAGCGGTCGCATaGTGCATTTGCAGCGGCAGTCAGAGCCCTCTGAGG | + |
Preference number: 6 (lower is better) Translates to: APGCMHPCSAVA*CICSGSQSPLR Trigger: CCTCAGAGGGCTCTGACTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | CCTGTCTGGCCTCCTGTCTGCCTGCCTTGTAGTAGGTaGAGCCTCGGATCACTGCCTGCTGCTGAGCCAGCG | + |
Preference number: 6 (lower is better) Translates to: PVWPPVCLPCSR*SLGSLPAAEPA Trigger: CGCTGGCTCAGCAGCAGGCAGTGATCCGAGGCTTCACCTACTACAAGGCAGGCAGACAGGAGGCCAGACAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | TCTGCCTGCCTTGTAGTAGGTGAAGCCTCGGATCACTaGCTGCTGCTGAGCCAGCGCACGTGGCCTGGCTGT | + |
Preference number: 6 (lower is better) Translates to: SACLVVGEASDH*LLLSQRTWPGC Trigger: ACAGCCAGGCCACGTGCGCTGGCTCAGCAGCAGGCAGTGATCCGAGGCTTCACCTACTACAAGGCAGGCAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | GTGGCAGGGACAGCGGCTGCATCCCTCTGCAGCAACTaGAGGCCCAGGCTAGACAGCTCCTTCTTGATGCTC | + |
Preference number: 6 (lower is better) Translates to: VAGTAAASLCSN*RPRLDSSFLML Trigger: GAGCATCAAGAAGGAGCTGTCTAGCCTGGGCCTCCAGTTGCTGCAGAGGGATGCAGCCGCTGTCCCTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | TTGTTGAGATCTCTGCCTTGCCCTCCAGCTGTGTCCTaGGCCTTGCTGTCGGGGCTTGAGGCTGGGGCAGTG | + |
Preference number: 6 (lower is better) Translates to: LLRSLPCPPAVS*ALLSGLEAGAV Trigger: CACTGCCCCAGCCTCAAGCCCCGACAGCAAGGCTCAGGACACAGCTGGAGGGCAAGGCAGAGATCTCAACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | CTCCCGACCTTGGCTGGGGACTTCTGGATGCAAAGGTaGCTCAGTAGGCCAGGGAGTGGTGATAGGGCTTGG | + |
Preference number: 6 (lower is better) Translates to: LPTLAGDFWMQR*LSRPGSGDRAW Trigger: CCAAGCCCTATCACCACTCCCTGGCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | CTCACAGCTGTCCTCCCGACCTTGGCTGGGGACTTCTaGATGCAAAGGTGGCTCAGTAGGCCAGGGAGTGGT | + |
Preference number: 6 (lower is better) Translates to: LTAVLPTLAGDF*MQRWLSRPGSG Trigger: ACCACTCCCTGGCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | CTTCCACGTGGTCTCCCGGTGCACAGAGAGGTCTGCTaGGTCCAGGCGGCTCAACACAATCACCTCATGCTG | + |
Preference number: 6 (lower is better) Translates to: LPRGLPVHREVC*VQAAQHNHLML Trigger: CAGCATGAGGTGATTGTGTTGAGCCGCCTGGACCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | TCCCATAGGAGTTCCTCCTCAGCCGTGTCTTCCACGTaGTCTCCCGGTGCACAGAGAGGTCTGCTGGGTCCA | + |
Preference number: 6 (lower is better) Translates to: SHRSSSSAVSST*SPGAQRGLLGP Trigger: TGGACCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTGGAAGACACGGCTGAGGAGGAACTCCTATGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 90 bp | TTGGCCTCTATCTTGGGTGGTAGCTTCTCCAGCCAGGAAGTTCCTTaGAGGGTGCTGTCAGCGGCAGCCTTGGGTGCCTCCTGTCTGGCC | + |
Preference number: 6 (lower is better) Translates to: LASILGGSFSSQEVP*RVLSAAALGASCLA Trigger: GGCCAGACAGGAGGCACCCAAGGCTGCCGCTGACAGCACCCTCAAAGGAACTTCCTGGCTGGAGAAGCTACCACCCAAGATAGAGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | TCTTGGGTGGTAGCTTCTCCAGCCAGGAAGTTCCTTTaGGGGTGCTGTCAGCGGCAGCCTTGGGTGCCTCCT | + |
Preference number: 6 (lower is better) Translates to: SWVVASPARKFL*GCCQRQPWVPP Trigger: AGGAGGCACCCAAGGCTGCCGCTGACAGCACCCTCAAAGGAACTTCCTGGCTGGAGAAGCTACCACCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | CTCTACTCGTGCTCGCCCACTTCGCACCCGGCTGCATaGATCCTTGCTCAGCGGTCGCATGATGCATTTGCA | + |
Preference number: 6 (lower is better) Translates to: LYSCSPTSHPAA*ILAQRSHDAFA Trigger: TGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAGCCGGGTGCGAAGTGGGCGAGCACGAGTAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | CAGCTGTCCTCCCGACCTTGGCTGGGGACTTCTGGATaGAAAGGTGGCTCAGTAGGCCAGGGAGTGGTGATA | + |
Preference number: 6 (lower is better) Translates to: QLSSRPWLGTSG*KGGSVGQGVVI Trigger: TATCACCACTCCCTGGCCTACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | TGTCTTCCACGTGGTCTCCCGGTGCACAGAGAGGTCTaGTGGGTCCAGGCGGCTCAACACAATCACCTCATG | + |
Preference number: 6 (lower is better) Translates to: CLPRGLPVHREV*WVQAAQHNHLM Trigger: CATGAGGTGATTGTGTTGAGCCGCCTGGACCCAGCAGACCTCTCTGTGCACCGGGAGACCACGTGGAAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | CAGCGGCAGTCAGAGCCCTCTGAGGTCATCCGAACCTaGTCCAGGTCACTGAATACCTTACTGTCGGGCCAC | + |
Preference number: 6 (lower is better) Translates to: QRQSEPSEVIRT*SRSLNTLLSGH Trigger: GTGGCCCGACAGTAAGGTATTCAGTGACCTGGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CCA 72 bp | GCTCTGAGTGTGCCCTCACAGCTGTCCTCCCGACCTTaGCTGGGGACTTCTGGATGCAAAGGTGGCTCAGTA | + |
Preference number: 6 (lower is better) Translates to: ALSVPSQLSSRP*LGTSGCKGGSV Trigger: TACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTGTGAGGGCACACTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | ATCTTGGGTGGTAGCTTCTCCAGCCAGGAAGTTCCTTaGAGGGTGCTGTCAGCGGCAGCCTTGGGTGCCTCC | + |
Preference number: 6 (lower is better) Translates to: ILGGSFSSQEVP*RVLSAAALGAS Trigger: GGAGGCACCCAAGGCTGCCGCTGACAGCACCCTCAAAGGAACTTCCTGGCTGGAGAAGCTACCACCCAAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | AGCTCTGAGTGTGCCCTCACAGCTGTCCTCCCGACCTaGGCTGGGGACTTCTGGATGCAAAGGTGGCTCAGT | + |
Preference number: 6 (lower is better) Translates to: SSECALTAVLPT*AGDFWMQRWLS Trigger: ACTGAGCCACCTTTGCATCCAGAAGTCCCCAGCCAAGGTCGGGAGGACAGCTGTGAGGGCACACTCAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | GCTCACTGTCTCCACAGTGTAGAAGTCCTCTACTCGTaGTCGCCCACTTCGCACCCGGCTGCATGCATCCTT | + |
Preference number: 6 (lower is better) Translates to: AHCLHSVEVLYS*SPTSHPAACIL Trigger: AAGGATGCATGCAGCCGGGTGCGAAGTGGGCGAGCACGAGTAGAGGACTTCTACACTGTGGAGACAGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | CTGCATGCATCCTTGCTCAGCGGTCGCATGATGCATTaGCAGCGGCAGTCAGAGCCCTCTGAGGTCATCCGA | + |
Preference number: 6 (lower is better) Translates to: LHASLLSGRMMH*QRQSEPSEVIR Trigger: TCGGATGACCTCAGAGGGCTCTGACTGCCGCTGCAAATGCATCATGCGACCGCTGAGCAAGGATGCATGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | AGGGCACCCTCCAGGAGATCCACCATAGACTGCAGCTaGAGGAGCTCAGGTGCCTGCTTCTTCAGTTTCTCC | + |
Preference number: 6 (lower is better) Translates to: RAPSRRSTIDCS*RSSGACFFSFS Trigger: GGAGAAACTGAAGAAGCAGGCACCTGAGCTCCTCAAGCTGCAGTCTATGGTGGATCTCCTGGAGGGTGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | TCGCATGATGCATTTGCAGCGGCAGTCAGAGCCCTCTaGGGTCATCCGAACCTGGTCCAGGTCACTGAATAC | + |
Preference number: 6 (lower is better) Translates to: SHDAFAAAVRAL*GHPNLVQVTEY Trigger: GTATTCAGTGACCTGGACCAGGTTCGGATGACCTCAGAGGGCTCTGACTGCCGCTGCAAATGCATCATGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | GCTGTGTTTCGTCATGCTCATCCACAGCTGGGTAGATaGCCCACAGGCCGCTCTCATCCACGGCAAAATCAA | + |
Preference number: 6 (lower is better) Translates to: AVFRHAHPQLGR*PTGRSHPRQNQ Trigger: TTGATTTTGCCGTGGATGAGAGCGGCCTGTGGGTCATCTACCCAGCTGTGGATGAGCATGACGAAACACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | ACGCTGTCTTTCACCACCTTGTTCTCCAGGCTCAGGTaGGCCTTGATGCTCTCCTCCAGCGTATTCATCTGG | + |
Preference number: 6 (lower is better) Translates to: TLSFTTLFSRLR*ALMLSSSVFIW Trigger: CCAGATGAATACGCTGGAGGAGAGCATCAAGGCCAACCTGAGCCTGGAGAACAAGGTGGTGAAAGACAGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | CTTCTGTATGCTGCCATATTTGTTGAGATCTCTGCCTaGCCCTCCAGCTGTGTCCTGAGCCTTGCTGTCGGG | + |
Preference number: 6 (lower is better) Translates to: LLYAAIFVEISA*PSSCVLSLAVG Trigger: CCCGACAGCAAGGCTCAGGACACAGCTGGAGGGCAAGGCAGAGATCTCAACAAATATGGCAGCATACAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 90 bp | TGCAGCCGGACGTCATCATGTTTGGCAGAGTTAGGTTCCGGAAGTTaGGCCTCTATCTTGGGTGGTAGCTTCTCCAGCCAGGAAGTTCCT | + |
Preference number: 6 (lower is better) Translates to: CSRTSSCLAELGSGS*ASILGGSFSSQEVP Trigger: AGGAACTTCCTGGCTGGAGAAGCTACCACCCAAGATAGAGGCCAAACTTCCGGAACCTAACTCTGCCAAACATGATGACGTCCGGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 90 bp | CTCATAGACCACATCAGGCAGCAGGGCCCAGGAGGCCACAAAGCGTaGGCGCAGGTCATATTTGATGATATTCTTGGTGAAGGCACGGTT | + |
Preference number: 6 (lower is better) Translates to: LIDHIRQQGPGGHKA*AQVIFDDILGEGTV Trigger: AACCGTGCCTTCACCAAGAATATCATCAAATATGACCTGCGCCAACGCTTTGTGGCCTCCTGGGCCCTGCTGCCTGATGTGGTCTATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | GTAATGTCAGGGGTCAAGTTGCCTCCTTCTGAAGCCTaGAGCCGGACGTCATCATGTTTGGCAGAGTTAGGT | + |
Preference number: 6 (lower is better) Translates to: VMSGVKLPPSEA*SRTSSCLAELG Trigger: ACCTAACTCTGCCAAACATGATGACGTCCGGCTGCAGGCTTCAGAAGGAGGCAACTTGACCCCTGACATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS GCA 72 bp | CTTCATGCTGGTTGTAAGTGTCCACGGTGTAGAGGATaGCGCACACCAGAAAGCAGTTCCCATAGGAGTTCC | + |
Preference number: 6 (lower is better) Translates to: LHAGCKCPRCRG*RTPESSSHRSS Trigger: GGAACTCCTATGGGAACTGCTTTCTGGTGTGCGGCATCCTCTACACCGTGGACACTTACAACCAGCATGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | GGTTGTAGTCAACCTGGGTGGTATAGGAATACTCATTaGGGAAGGGCAACTGTGGGTGAGCATCAGTGCCAG | + |
Preference number: 6 (lower is better) Translates to: GCSQPGWYRNTH*GRATVGEHQCQ Trigger: CTGGCACTGATGCTCACCCACAGTTGCCCTTCCTCAATGAGTATTCCTATACCACCCAGGTTGACTACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS CAA 72 bp | TTGGCAGAGTTAGGTTCCGGAAGTTTGGCCTCTATCTaGGGTGGTAGCTTCTCCAGCCAGGAAGTTCCTTTG | + |
Preference number: 6 (lower is better) Translates to: LAELGSGSLASI*GGSFSSQEVPL Trigger: CAAAGGAACTTCCTGGCTGGAGAAGCTACCACCCAAGATAGAGGCCAAACTTCCGGAACCTAACTCTGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | GAAACTCCACCAGGCTGTTTCCGTAGTAGTAGTTGGTaGCATAGATCCTGTCATCAAGAGCTGCAGGGTCCT | + |
Preference number: 6 (lower is better) Translates to: ETPPGCFRSSSW*HRSCHQELQGP Trigger: AGGACCCTGCAGCTCTTGATGACAGGATCTATGTCACCAACTACTACTACGGAAACAGCCTGGTGGAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |
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CDS TCA 72 bp | AGGGTAGTTTATACATATTACTCCATCGGCCTTGTTTaGAATTTTCCAGGTTTCGAAACTCCACCAGGCTGT | + |
Preference number: 6 (lower is better) Translates to: RVVYTYYSIGLV*NFPGFETPPGC Trigger: ACAGCCTGGTGGAGTTTCGAAACCTGGAAAATTTCAAACAAGGCCGATGGAGTAATATGTATAAACTACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057279.6 |