Pregenerated sensors for OLFML1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051041Ensembl transcript IDs: ENSMUST00000120990.2, ENSMUST00000239087.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGAAGAACAAATTGGGCAGATGCTCCTCCCTGACAGTGCCCAGTaGATCATAGACACAGGTGATTCGATGAGAGCCCTGGCCACCGGA | + |
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Preference number: 1 (lower is better) Translates to: REEQIGQMLLPDSAQ*IIDTGDSMRALATG Trigger: TCCGGTGGCCAGGGCTCTCATCGAATCACCTGTGTCTATGATCCACTGGGCACTGTCAGGGAGGAGCATCTGCCCAATTTGTTCTTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR TCA 90 bp | CCTATGTGCATCGAGAGGGCCAGATACTCCACTATAAAGGGGCTGTaGCCTCAGTGTCCCGGAAAACCACTGCCCAAGTCACACTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PMCIERARYSTIKGL*PQCPGKPLPKSHCS Trigger: AGAGCAGTGTGACTTGGGCAGTGGTTTTCCGGGACACTGAGGTCACAGCCCCTTTATAGTGGAGTATCTGGCCCTCTCGATGCACATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR GCA 90 bp | CACAGCAAGGTCAATGTACGTAGAGAGAGAGTGTTGATAGATGGGTaGTCGGCCTGCCCCTCCTGGGAGAAGCATTCGATCTTCCACAGT | + |
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Preference number: 1 (lower is better) Translates to: HSKVNVRRERVLIDG*SACPSWEKHSIFHS Trigger: ACTGTGGAAGATCGAATGCTTCTCCCAGGAGGGGCAGGCCGAGCACCCATCTATCAACACTCTCTCTCTACGTACATTGACCTTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR GCA 90 bp | GTGTCCCGGAAAACCACTGCCCAAGTCACACTGCTCTCCCTCCAATaGCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VSRKTTAQVTLLSLQ*QPLLQRQLFLCLEF Trigger: AAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGACTTGGGCAGTGGTTTTCCGGGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR CCA 90 bp | CGTAGAGAGAGAGTGTTGATAGATGGGTGCTCGGCCTGCCCCTCCTaGGAGAAGCATTCGATCTTCCACAGTCTTCTTCTGCAGATTATA | + |
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Preference number: 1 (lower is better) Translates to: RRERVLIDGCSACPS*EKHSIFHSLLLQII Trigger: TATAATCTGCAGAAGAAGACTGTGGAAGATCGAATGCTTCTCCCAGGAGGGGCAGGCCGAGCACCCATCTATCAACACTCTCTCTCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR CCA 90 bp | AAGCTGCTTATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTTaGCCGCCTAGGGAAGAACAAATTGGGCAGATGCTCCTCCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: KLLISGVVMDHGVTS*PPREEQIGQMLLPD Trigger: GTCAGGGAGGAGCATCTGCCCAATTTGTTCTTCCCTAGGCGGCCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATAAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR TCA 90 bp | GCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTAAATaGTCTGATTGCCTTCATTCCAGGCATAAAGCTGCTTATCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: AITPEAAFSLSGVCK*SDCLHSRHKAAYLW Trigger: CCAGAGATAAGCAGCTTTATGCCTGGAATGAAGGCAATCAGATCATTTACAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAAGTCACACTGCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTCGGCCTGCCCCTCCTaGGAGAAGCATTCGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPKSHCSPSNASHYSRGSSACPS*EKHSIF Trigger: GAAGATCGAATGCTTCTCCCAGGAGGGGCAGGCCGA...GCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGACTTGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCAAGTCACACTGCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCATACCTGGTCCTGAGTaGATGGCCCAGAGTCCGTGT | + |
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Preference number: 2 (lower is better) Translates to: LPKSHCSPSNASHYSRGSIPGPE*MAQSPC Trigger: ACACGGACTCTGGGCCATTCACTCAGGACCAGGTAT...GCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGACTTGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCCAGTGGATCATAGACACAGGTGATTCGATGAGAGCCCTGGCCACCGGACTGGTCCTGAGTGAATaGCCCAGAGTCCGTGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: SAQWIIDTGDSMRALATGLVLSE*PRVRVH Trigger: ATGAACACGGACTCTGGGCCATTCACTCAGGACCAG...TCCGGTGGCCAGGGCTCTCATCGAATCACCTGTGTCTATGATCCACTGGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGTGACCTCAGTGTCCCGGAAAACCACTGCCCAAGTCACACTGCTCTCCCTCCCTGACAGTGCCCAGTaGATCATAGACACAGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: AVTSVSRKTTAQVTLLSLPDSAQ*IIDTGD Trigger: ATCACCTGTGTCTATGATCCACTGGGCACTGTCAGG...GAGGGAGAGCAGTGTGACTTGGGCAGTGGTTTTCCGGGACACTGAGGTCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGGCCGCCTAGGGAAGAACAAATTGGGCAGATGCTCCTCCCTGACAGTGCAGGCTCAATTTTTGTaGGAACCAAATGGCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LLGRLGKNKLGRCSSLTVQAQFL*EPNGLG Trigger: TCCAAGGCCATTTGGTTCTCACAAAAATTGAGCCTG...CACTGTCAGGGAGGAGCATCTGCCCAATTTGTTCTTCCCTAGGCGGCCAAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGATTTGTGAGAACCAAATaGCCTTGGATACCTGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ALPPMPAITPEAAFSLSGFVRTK*PWIPGP Trigger: AGGACCAGGTATCCAAGGCCATTTGGTTCTCACAAA...TCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR GCA 72 bp | CCTCAGTGTCCCGGAAAACCACTGCCCAAGTCACACTaGTCTCCCTCCAATGCCAGCCATTACTCCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: PQCPGKPLPKSH*SPSNASHYSRG Trigger: GCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGACTTGGGCAGTGGTTTTCCGGGACACTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR CCA 72 bp | CAAATTGGGCAGATGCTCCTCCCTGACAGTGCCCAGTaGATCATAGACACAGGTGATTCGATGAGAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: QIGQMLLPDSAQ*IIDTGDSMRAL Trigger: CAGGGCTCTCATCGAATCACCTGTGTCTATGATCCACTGGGCACTGTCAGGGAGGAGCATCTGCCCAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR CCA 72 bp | AGGACCCCACACAGTAGGAATGAAGCTTCCGCATCCTaGCTTCTACACGGTGTATCCCATGAATGTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: RTPHSRNEASAS*LLHGVSHECST Trigger: AGTAGAACATTCATGGGATACACCGTGTAGAAGCCAGGATGCGGAAGCTTCATTCCTACTGTGTGGGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR CCA 72 bp | ATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTTaGCCGCCTAGGGAAGAACAAATTGGGCAGATGCTC | + |
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Preference number: 3 (lower is better) Translates to: ISGVVMDHGVTS*PPREEQIGQML Trigger: GAGCATCTGCCCAATTTGTTCTTCCCTAGGCGGCCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR TCA 72 bp | AGCTTCCGCATCCTGGCTTCTACACGGTGTATCCCATaGATGTTCTACTCCCAAAGTGTCAGGCTCAATTTT | + |
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Preference number: 3 (lower is better) Translates to: SFRILASTRCIP*MFYSQSVRLNF Trigger: AAAATTGAGCCTGACACTTTGGGAGTAGAACATTCATGGGATACACCGTGTAGAAGCCAGGATGCGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR CCA 72 bp | GATTGCCTTCATTCCAGGCATAAAGCTGCTTATCTCTaGGGTTGTAATGGATCATGGAGTGACTTCTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: DCLHSRHKAAYL*GCNGSWSDFLA Trigger: GGCCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATAAGCAGCTTTATGCCTGGAATGAAGGCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR TCA 72 bp | CCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTAAATaGTCTGATTGCCTTCATTCCAGGCATAAAGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: PEAAFSLSGVCK*SDCLHSRHKAA Trigger: AGCAGCTTTATGCCTGGAATGAAGGCAATCAGATCATTTACAAACTCCAGACAAAGAAAAAGCTGCCTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| 3UTR GCA 72 bp | GAATATGTATTTCAACTTTTAGAACCTATTCCTATGTaGATCGAGAGGGCCAGATACTCCACTATAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: EYVFQLLEPIPM*IERARYSTIKG Trigger: CCCCTTTATAGTGGAGTATCTGGCCCTCTCGATGCACATAGGAATAGGTTCTAAAAGTTGAAATACATATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CCA 90 bp | TGCCCAAGTCACACTGCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTACCATGGCTGGGTCCTaGGCATGTTGTGGTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: CPSHTALPPMPAITPEAATMAGS*ACCGGG Trigger: GCCCCCACCACAACATGCCCAGGACCCAGCCATGGT...AGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGACTTGGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CCA 90 bp | GCTGTGACCTCAGTGTCCCGGAAAACCACTGCCCAAGTCACACTGCTCTCCCTCCATCCAAGAGCCATCTaGGTCCACGGTCTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: AVTSVSRKTTAQVTLLSLHPRAI*VHGLLH Trigger: GTGAAGAAGACCGTGGACCCAGATGGCTCTTGGATG...GAGGGAGAGCAGTGTGACTTGGGCAGTGGTTTTCCGGGACACTGAGGTCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTGGGGGCAGAAATGCTaGAAGGAAGAGAACCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PSNASHYSRGSFFFVWSLWGQKC*KEENQG Trigger: TCCCTGGTTCTCTTCCTTGCAGCATTTCTGCCCCCA...CAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR GCA 90 bp | CCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTGGTGGGGGCAGAAATaGTGCAAGGAAGAGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: PSNASHYSRGSFFFVWSLWWGQK*CKEENQ Trigger: CTGGTTCTCTTCCTTGCAGCATTTCTGCCCCCACCA...CAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR TCA 90 bp | CTGCCCAAGTCACACTGCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCAATTCCTGGAAGTCTTaGATATATGCCCTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPKSHCSPSNASHYSRGSNSWKS*IYALVV Trigger: AACAACAAGGGCATATATTCAAGACTTCCAGGAATT...GCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGACTTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CCA 90 bp | CCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTATGCCCTTGTTGTTTaGGCACATTTTTCCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PSNASHYSRGSFFFVWSLYALVV*AHFSSP Trigger: AGGGCTGGAAAAATGTGCCCAAACAACAAGGGCATA...CAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR GCA 90 bp | CTTATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTTGGCCGCCTAGGGAAGAATGCCCGCAAGTTTaGAAATTCCCAAACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LISGVVMDHGVTSWPPREECPQV*KFPNCV Trigger: AACACAGTTTGGGAATTTGCAAACTTGCGGGCATTC...TTCCCTAGGCGGCCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CCA 90 bp | AGAATATGTATTTCAACTTTTAGAACCTATTCCTATGTGCATCGAGAGGGCCAGGTCCTGGGCATGTTGTaGTGGGGGCAGAAATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RICISTFRTYSYVHREGQVLGML*WGQKCC Trigger: GCAGCATTTCTGCCCCCACCACAACATGCCCAGGAC...CTGGCCCTCTCGATGCACATAGGAATAGGTTCTAAAAGTTGAAATACATATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR TCA 90 bp | TGGCTTCTACACGGTGTATCCCATGAATGTTCTACTCCCAAAGTGTCAGGCTCATCTTCTGCTTCTTCTTaGAGCAACTTTTCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: WLLHGVSHECSTPKVSGSSSASS*SNFSAS Trigger: ACTGGCTGAAAAGTTGCTTCAAGAAGAAGCAGAAGA...TGAGCCTGACACTTTGGGAGTAGAACATTCATGGGATACACCGTGTAGAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR GCA 90 bp | CTTATCTCTGGGGTTGTAATGGATCATGGAGTGACTTCTTGGCCGCCTAGGGAAGGCAAGGTTTTCCACTaGACTCTTATATTCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LISGVVMDHGVTSWPPREGKVFH*TLIFTC Trigger: ACAAGTGAATATAAGAGTGCAGTGGAAAACCTTGCC...TTCCCTAGGCGGCCAAGAAGTCACTCCATGATCCATTACAACCCCAGAGATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CCA 90 bp | AGAATATGTATTTCAACTTTTAGAACCTATTCCTATGTGCATCGAGAGGGCCAGGTAGTGTACCATGGCTaGGTCCTGGGCATGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RICISTFRTYSYVHREGQVVYHG*VLGMLW Trigger: CCACAACATGCCCAGGACCCAGCCATGGTACACTAC...CTGGCCCTCTCGATGCACATAGGAATAGGTTCTAAAAGTTGAAATACATATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR GCA 90 bp | GTCACACTGCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTGATCTTCTTTTCTTCTaGTTCTTCTTGAAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: VTLLSLQCQPLLQRQLFLDLLFF*FFLKQL Trigger: AAGTTGCTTCAAGAAGAAGCAGAAGAAAAGAAGATC...AAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGCAGTGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR GCA 90 bp | ACTCCCAAAGTGTCAGGCTCAATTTTTGTGAGAACCAAATGGCCTTGGATACCTGCTATCTTCCATGAATaGCCGCAAGTTTGCAAATTC | + |
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Preference number: 4 (lower is better) Translates to: TPKVSGSIFVRTKWPWIPAIFHE*PQVCKF Trigger: GAATTTGCAAACTTGCGGGCATTCATGGAAGATAGC...AGGTATCCAAGGCCATTTGGTTCTCACAAAAATTGAGCCTGACACTTTGGGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS CCA 90 bp | GCCCTTGCTCGAGGACTTGGAAGCGCTGGTAGATGTAGTGTACCATaGCTGGGTCCTGGGCATGTTGTGGTGGGGGCAGAAATGCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: ALARGLGSAGRCSVP*LGPGHVVVGAEMLQ Trigger: TTGCAGCATTTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATCTACCAGCGCTTCCAAGTCCTCGAGCAAGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CCA 90 bp | GCGCTGGTAGATGTAGTGTACCATGGCTGGGTCCTGGGCATGTTGTaGTGGGGGCAGAAATGCTGCAAGGAAGAGAACCAGGGAAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: ALVDVVYHGWVLGML*WGQKCCKEENQGSR Trigger: TCTGCTTCCCTGGTTCTCTTCCTTGCAGCATTTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATCTACCAGCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CCA 90 bp | TTGCTCGAGGACTTGGAAGCGCTGGTAGATGTAGTGTACCATGGCTaGGTCCTGGGCATGTTGTGGTGGGGGCAGAAATGCTGCAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LLEDLEALVDVVYHG*VLGMLWWGQKCCKE Trigger: TTCCTTGCAGCATTTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATCTACCAGCGCTTCCAAGTCCTCGAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS-3UTR CAA 90 bp | TTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTAAATGATCTGATTGCCTGGGTCCTGGGCATGTaGTGGTGGGGGCAGAAATGC | + |
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Preference number: 5 (lower is better) Translates to: LLQRQLFLCLEFVNDLIAWVLGM*WWGQKC Trigger: GCATTTCTGCCCCCACCACAACATGCCCAGGACCCA...GGCAATCAGATCATTTACAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CAA 90 bp | CTGCCCCTCCTGGGAGAAGCATTCGATCTTCCACAGTCTTCTTCTGCAGATTATATATGCCCTTGTTGTTaGGGCACATTTTTCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPLLGEAFDLPQSSSADYICPCC*GTFFQP Trigger: GGGCTGGAAAAATGTGCCCAAACAACAAGGGCATAT...ATAATCTGCAGAAGAAGACTGTGGAAGATCGAATGCTTCTCCCAGGAGGGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS GCA 90 bp | CTTCTTGAAGCAACTTTTCAGCCAGTGTCTTCTCCTCAGATTCAATaGAGAAGTCAGCTTCTCGCAGGTACTGCAGGTAGTCGATCTCCT | + |
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Preference number: 5 (lower is better) Translates to: LLEATFQPVSSPQIQ*RSQLLAGTAGSRSP Trigger: AGGAGATCGACTACCTGCAGTACCTGCGAGAAGCTGACTTCTGCATTGAATCTGAGGAGAAGACACTGGCTGAAAAGTTGCTTCAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS-3UTR CAA 90 bp | CCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGATAGCCATCAGCATGTaGTCACAGCTTGTGTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: PSNASHYSRGSFFFVWSLIAISM*SQLVFN Trigger: GTTGAACACAAGCTGTGACAACATGCTGATGGCTAT...CAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CAA 90 bp | TTACTCCAGAGGCAGCTTTTTCTTTGTCTGGAGTTTGTAAATGATCTGATTGCCCCCTTGCTCGAGGACTaGGAAGCGCTGGTAGATGTA | + |
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Preference number: 5 (lower is better) Translates to: LLQRQLFLCLEFVNDLIAPLLED*EALVDV Trigger: TACATCTACCAGCGCTTCCAAGTCCTCGAGCAAGGG...GGCAATCAGATCATTTACAAACTCCAGACAAAGAAAAAGCTGCCTCTGGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CAA 90 bp | GCTCTCCCTCCAATGCCAGCCATTACTCCAGAGGCAGCTTTTTCTTTGTCTGGACTTGAATATATGCCCTaGTTGTTTGGGCACATTTTT | + |
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Preference number: 5 (lower is better) Translates to: ALPPMPAITPEAAFSLSGLEYMP*LFGHIF Trigger: AAAAATGTGCCCAAACAACAAGGGCATATATTCAAG...TCCAGACAAAGAAAAAGCTGCCTCTGGAGTAATGGCTGGCATTGGAGGGAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS GCA 90 bp | GTTGTCACAGCTTGTGTTCAACAGGGTTCGGATCTTCTTTTCTTCTaGTTCTTCTTGAAGCAACTTTTCAGCCAGTGTCTTCTCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VVTACVQQGSDLLFF*FFLKQLFSQCLLLR Trigger: TCTGAGGAGAAGACACTGGCTGAAAAGTTGCTTCAAGAAGAAGCAGAAGAAAAGAAGATCCGAACCCTGTTGAACACAAGCTGTGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CCA 90 bp | CACTTTTGCAGAGTTACTGCCAGCATCTTTCATCCAAGAGCCATCTaGGTCCACGGTCTTCTTCACTATTTTCAGAGACTTTATAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: HFCRVTASIFHPRAI*VHGLLHYFQRLYSH Trigger: ATGGCTATAAAGTCTCTGAAAATAGTGAAGAAGACCGTGGACCCAGATGGCTCTTGGATGAAAGATGCTGGCAGTAACTCTGCAAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS TCA 90 bp | CTTGTGTTCAACAGGGTTCGGATCTTCTTTTCTTCTGCTTCTTCTTaGAGCAACTTTTCAGCCAGTGTCTTCTCCTCAGATTCAATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LVFNRVRIFFSSASS*SNFSASVFSSDSMQ Trigger: CTGCATTGAATCTGAGGAGAAGACACTGGCTGAAAAGTTGCTTCAAGAAGAAGCAGAAGAAAAGAAGATCCGAACCCTGTTGAACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS-3UTR CAA 90 bp | CTGGAGTTTGTAAATGATCTGATTGCCTTCATTCCAGGCATAAAGCTGCTTATCCTAATAGATACACTTTaGCAGAGTTACTGCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: LEFVNDLIAFIPGIKLLILIDTL*QSYCQH Trigger: ATGCTGGCAGTAACTCTGCAAAAGTGTATCTATTAG...GATAAGCAGCTTTATGCCTGGAATGAAGGCAATCAGATCATTTACAAACTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGCATTCGATCTTCCACAGTCTTCTTCTGCAGATTATATTTAATTATCTCAATTCCCAAACTGTGTaGTTTCTGGATCCAGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: EKHSIFHSLLLQIIFNYLNSQTV*FLDPAN Trigger: ATTAGCTGGATCCAGAAACAACACAGTTTGGGAATT...GAGATAATTAAATATAATCTGCAGAAGAAGACTGTGGAAGATCGAATGCTTCTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS CCA 72 bp | CGAGGACTTGGAAGCGCTGGTAGATGTAGTGTACCATaGCTGGGTCCTGGGCATGTTGTGGTGGGGGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RGLGSAGRCSVP*LGPGHVVVGAE Trigger: TTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATCTACCAGCGCTTCCAAGTCCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 90 bp | GAAGCGCTGGTAGATGTAGTGTACCATGGCTGGGTCCTGGGCATGTaGTGGTGGGGGCAGAAATGCTGCAAGGAAGAGAACCAGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: EALVDVVYHGWVLGM*WWGQKCCKEENQGS Trigger: GCTTCCCTGGTTCTCTTCCTTGCAGCATTTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATCTACCAGCGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CCA 72 bp | GACTTGGAAGCGCTGGTAGATGTAGTGTACCATGGCTaGGTCCTGGGCATGTTGTGGTGGGGGCAGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: DLEALVDVVYHG*VLGMLWWGQKC Trigger: GCATTTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATCTACCAGCGCTTCCAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CCA 72 bp | GATGTAGTGTACCATGGCTGGGTCCTGGGCATGTTGTaGTGGGGGCAGAAATGCTGCAAGGAAGAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: DVVYHGWVLGML*WGQKCCKEENQ Trigger: CTGGTTCTCTTCCTTGCAGCATTTCTGCCCCCACCACAACATGCCCAGGACCCAGCCATGGTACACTACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | GCATTCGATCTTCCACAGTCTTCTTGGGGACCAGGCTaGATGCTATCTTCCATGAATGCCCGCAAGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: AFDLPQSSWGPG*MLSSMNARKFA Trigger: TGCAAACTTGCGGGCATTCATGGAAGATAGCATCAAGCCTGGTCCCCAAGAAGACTGTGGAAGATCGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239087.2 |
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| CDS CAA 90 bp | GATCCCTGCCAGGAAAGTGGTAAGATTAACTTACGGGGACCAGGCTaGATGCTATCTTCCATGAATGCCCGCAAGTTTGCAAATTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: DPCQESGKINLRGPG*MLSSMNARKFANSQ Trigger: TTGGGAATTTGCAAACTTGCGGGCATTCATGGAAGATAGCATCAAGCCTGGTCCCCGTAAGTTAATCTTACCACTTTCCTGGCAGGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS GCA 72 bp | CTTACGGGGACCAGGCTTGATGCTATCTTCCATGAATaGCCGCAAGTTTGCAAATTCCCAAACTGTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LTGTRLDAIFHE*PQVCKFPNCVV Trigger: AACAACACAGTTTGGGAATTTGCAAACTTGCGGGCATTCATGGAAGATAGCATCAAGCCTGGTCCCCGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS CAA 72 bp | CAGGAAAGTGGTAAGATTAACTTACGGGGACCAGGCTaGATGCTATCTTCCATGAATGCCCGCAAGTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QESGKINLRGPG*MLSSMNARKFA Trigger: TGCAAACTTGCGGGCATTCATGGAAGATAGCATCAAGCCTGGTCCCCGTAAGTTAATCTTACCACTTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120990.2 |
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| CDS GCA 72 bp | TGGATCCAGCTAATAGATACACTTTTGCAGAGTTACTaGCAGCATCTTTCATCCAAGAGCCATCTGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WIQLIDTLLQSY*QHLSSKSHLGP Trigger: TGGACCCAGATGGCTCTTGGATGAAAGATGCTGGCAGTAACTCTGCAAAAGTGTATCTATTAGCTGGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS GCA 72 bp | TTCTTGGGGACCAGGCTTGATGCTATCTTCCATGAATaGCCGCAAGTTTGCAAATTCCCAAACTGTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FLGTRLDAIFHE*PQVCKFPNCVV Trigger: AACAACACAGTTTGGGAATTTGCAAACTTGCGGGCATTCATGGAAGATAGCATCAAGCCTGGTCCCCAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239087.2 |
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| CDS CCA 72 bp | AGAGTTACTGCCAGCATCTTTCATCCAAGAGCCATCTaGGTCCACGGTCTTCTTCACTATTTTCAGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RVTASIFHPRAI*VHGLLHYFQRL Trigger: AAGTCTCTGAAAATAGTGAAGAAGACCGTGGACCCAGATGGCTCTTGGATGAAAGATGCTGGCAGTAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | GAATTCCTGGAAGTCTTGAATATATGCCCTTGTTGTTaGGGCACATTTTTCCAGCCCTTGCTCGAGGACTTG | + |
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Preference number: 6 (lower is better) Translates to: EFLEVLNICPCC*GTFFQPLLEDL Trigger: CAAGTCCTCGAGCAAGGGCTGGAAAAATGTGCCCAAACAACAAGGGCATATATTCAAGACTTCCAGGAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | TTGAGAATTCCTGGAAGTCTTGAATATATGCCCTTGTaGTTTGGGCACATTTTTCCAGCCCTTGCTCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRIPGSLEYMPL*FGHIFPALARG Trigger: TCCTCGAGCAAGGGCTGGAAAAATGTGCCCAAACAACAAGGGCATATATTCAAGACTTCCAGGAATTCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 90 bp | GCTTGTGTTCAACAGGGTTCGGATCTTCTTTTCTTCTGCTTCTTCTaGAAGCAACTTTTCAGCCAGTGTCTTCTCCTCAGATTCAATGCA | + |
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Preference number: 6 (lower is better) Translates to: ACVQQGSDLLFFCFF*KQLFSQCLLLRFNA Trigger: TGCATTGAATCTGAGGAGAAGACACTGGCTGAAAAGTTGCTTCAAGAAGAAGCAGAAGAAAAGAAGATCCGAACCCTGTTGAACACAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 90 bp | ATTCCCAAACTGTGTTGTTTCTGGATCCAGCTAATAGATACACTTTaGCAGAGTTACTGCCAGCATCTTTCATCCAAGAGCCATCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: IPKLCCFWIQLIDTL*QSYCQHLSSKSHLG Trigger: ACCCAGATGGCTCTTGGATGAAAGATGCTGGCAGTAACTCTGCAAAAGTGTATCTATTAGCTGGATCCAGAAACAACACAGTTTGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | CTGTGTTGTTTCTGGATCCAGCTAATAGATACACTTTaGCAGAGTTACTGCCAGCATCTTTCATCCAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: LCCFWIQLIDTL*QSYCQHLSSKS Trigger: GCTCTTGGATGAAAGATGCTGGCAGTAACTCTGCAAAAGTGTATCTATTAGCTGGATCCAGAAACAACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CCA 72 bp | CCCGCAAGTTTGCAAATTCCCAAACTGTGTTGTTTCTaGATCCAGCTAATAGATACACTTTTGCAGAGTTAC | + |
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Preference number: 6 (lower is better) Translates to: PASLQIPKLCCF*IQLIDTLLQSY Trigger: GTAACTCTGCAAAAGTGTATCTATTAGCTGGATCCAGAAACAACACAGTTTGGGAATTTGCAAACTTGCGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | TTTTTGAGAATTCCTGGAAGTCTTGAATATATGCCCTaGTTGTTTGGGCACATTTTTCCAGCCCTTGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: FLRIPGSLEYMP*LFGHIFPALAR Trigger: TCGAGCAAGGGCTGGAAAAATGTGCCCAAACAACAAGGGCATATATTCAAGACTTCCAGGAATTCTCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | TTCACTATTTTCAGAGACTTTATAGCCATCAGCATGTaGTCACAGCTTGTGTTCAACAGGGTTCGGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FTIFRDFIAISM*SQLVFNRVRIF Trigger: GAAGATCCGAACCCTGTTGAACACAAGCTGTGACAACATGCTGATGGCTATAAAGTCTCTGAAAATAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 90 bp | ACGGTCTTCTTCACTATTTTCAGAGACTTTATAGCCATCAGCATGTaGTCACAGCTTGTGTTCAACAGGGTTCGGATCTTCTTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TVFFTIFRDFIAISM*SQLVFNRVRIFFSS Trigger: AGAAGAAAAGAAGATCCGAACCCTGTTGAACACAAGCTGTGACAACATGCTGATGGCTATAAAGTCTCTGAAAATAGTGAAGAAGACCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 90 bp | CTATCTTCCATGAATGCCCGCAAGTTTGCAAATTCCCAAACTGTGTaGTTTCTGGATCCAGCTAATAGATACACTTTTGCAGAGTTACTG | + |
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Preference number: 6 (lower is better) Translates to: LSSMNARKFANSQTV*FLDPANRYTFAELL Trigger: CAGTAACTCTGCAAAAGTGTATCTATTAGCTGGATCCAGAAACAACACAGTTTGGGAATTTGCAAACTTGCGGGCATTCATGGAAGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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| CDS CAA 72 bp | ATGAATGCCCGCAAGTTTGCAAATTCCCAAACTGTGTaGTTTCTGGATCCAGCTAATAGATACACTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: MNARKFANSQTV*FLDPANRYTFA Trigger: TGCAAAAGTGTATCTATTAGCTGGATCCAGAAACAACACAGTTTGGGAATTTGCAAACTTGCGGGCATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120990.2 ENSMUST00000239087.2 |
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