Pregenerated sensors for OLFM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044265Ensembl transcript IDs: ENSMUST00000051137.15, ENSMUST00000154555.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCAAGATTCTGCCTCCCTTCTCTGCAGAACCTTTCAAGAGTATaGAGATCTGAGAGGAAACTTCTGTACCTCACTCTCAATACTAAC | + |
|
Preference number: 1 (lower is better) Translates to: RPRFCLPSLQNLSRV*RSERKLLYLTLNTN Trigger: GTTAGTATTGAGAGTGAGGTACAGAAGTTTCCTCTCAGATCTCCATACTCTTGAAAGGTTCTGCAGAGAAGGGAGGCAGAATCTTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCATGGATTTTCTATGCTaGCTCCAGATGCACTCAACC | + |
|
Preference number: 2 (lower is better) Translates to: LRSVEVSEEFIFRPRFCLMDFLC*LQMHST Trigger: GGTTGAGTGCATCTGGAGTCAGCATAGAAAATCCAT...GAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTAAGAGTATGGAGATCTaGGAGGAAACTTCTGTACCT | + |
|
Preference number: 2 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSKSMEI*EETSVP Trigger: AGGTACAGAAGTTTCCTCTCAGATCTCCATACTCTT...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR-3UTR CCA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTAACCTTTCAAGAGTATaGAGATCTGAGAGGAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: GQLRSVKNLSSGQDSASLNLSRV*RSERKL Trigger: AAGTTTCCTCTCAGATCTCCATACTCTTGAAAGGTT...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR-3UTR TCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTTACATGCTAAACACGTaGTTCAGCATTCATCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSYMLNT*FSIHLS Trigger: AGATAGATGAATGCTGAATCACGTGTTTAGCATGTA...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR CCA 72 bp | TTCTGCCTCCCTTCTCTGCAGAACCTTTCAAGAGTATaGAGATCTGAGAGGAAACTTCTGTACCTCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FCLPSLQNLSRV*RSERKLLYLTL Trigger: GAGAGTGAGGTACAGAAGTTTCCTCTCAGATCTCCATACTCTTGAAAGGTTCTGCAGAGAAGGGAGGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR GCA 72 bp | GAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTaGCTCCCTTCTCTGCAGAACCTTTCAAGAGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: EVSEEFIFRPRF*LPSLQNLSRVW Trigger: CCATACTCTTGAAAGGTTCTGCAGAGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| 3UTR TCA 72 bp | TGCAATCACACCAAGAAGTCTTTATTGAGTATGTCTTaGGCCACAGTCCCATCCATATCCCATGCTACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CNHTKKSLLSMS*ATVPSISHATN Trigger: ATTTGTAGCATGGGATATGGATGGGACTGTGGCTCAAGACATACTCAATAAAGACTTCTTGGTGTGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTCAGCTGAGGCTGTCCTaGAAGCACCAGGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSQLRLS*KHQGQQ Trigger: CTGCTGCCCCTGGTGCTTCCAGGACAGCCTCAGCTG...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTTCCTCTCGGAGGGCATaGAAGCTTTGGCGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLRSVKNLSSGQDSASLSSRRA*KLWRAE Trigger: CTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGA...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTTTCTGCAGGCCTCCATaGGCACAGGAACCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSFCRPP*AQEPGA Trigger: GGCTCCTGGTTCCTGTGCTCATGGAGGCCTGCAGAA...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTGGGAAGAAGCTGGACTaGGTGCTGAGTCACGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSGKKLD*VLSHDP Trigger: GGGGTCGTGACTCAGCACCCAGTCCAGCTTCTTCCC...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTAGCGGTTGTTGTAGGTaGCACCAGGCAATGGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLRSVKNLSSGQDSASLSGCCR*HQAMGV Trigger: GACGCCCATTGCCTGGTGCCACCTACAACAACCGCT...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCTGTCCAACAGGATGCTaGGGTGGTGTTCCTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSVEVSEEFIFRPRFCLCPTGC*GGVPAQ Trigger: CTGGGCAGGAACACCACCTCAGCATCCTGTTGGACA...GAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | TTAAGGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCAGGGCATGGAAGCTTTaGCGGGCAGAGTCGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRSVEVSEEFIFRPRFCLRAWKL*RAESTR Trigger: TCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCT...GAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | TTAAGGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCACATTTCTCACCAGCTaGGGCTGTCCTGGAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LRSVEVSEEFIFRPRFCLTFLTS*GCPGST Trigger: GGTGCTTCCAGGACAGCCTCAGCTGGTGAGAAATGT...GAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGTCTTTATTGAGTATGTCTTGAGCCACAGTCCCATCCATATCCCATGCGACCATGAAGGCCCCTaGAAGAGCAGGCTTATACTG | + |
|
Preference number: 4 (lower is better) Translates to: QEVFIEYVLSHSPIHIPCDHEGP*KSRLIL Trigger: CAGTATAAGCCTGCTCTTTCAGGGGCCTTCATGGTC...GCATGGGATATGGATGGGACTGTGGCTCAAGACATACTCAATAAAGACTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTCCCAAGGGCAGTAATTaGTGCCGTGCAGAGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSPKGSN*CRAEFP Trigger: TGGAAACTCTGCACGGCATCAATTACTGCCCTTGGG...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGTCTTTATTGAGTATGTCTTGAGCCACAGTCCCATCCATATCCCATGCGGGTCAGACTGGCGTTaGTCACCTGGTTCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QEVFIEYVLSHSPIHIPCGSDWR*SPGSEV Trigger: AACTTCAGAACCAGGTGACCAACGCCAGTCTGACCC...GCATGGGATATGGATGGGACTGTGGCTCAAGACATACTCAATAAAGACTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGTCTTTATTGAGTATGTCTTGAGCCACAGTCCCATCCATATCCCATGCAATGTACTCTGTAGCTaGTCCAGCTGCTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEVFIEYVLSHSPIHIPCNVLCS*SSCCRK Trigger: CTTCCTGCAGCAGCTGGATCAGCTACAGAGTACATT...GCATGGGATATGGATGGGACTGTGGCTCAAGACATACTCAATAAAGACTTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCGCACCCCACAGACCATaGAGGCCCCTGAAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHSSISQTLTNTVFCFLIAPHRP*RPLKEQ Trigger: CTGCTCTTTCAGGGGCCTTCATGGTCTGTGGGGTGC...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTAGATGGACCACACACTaGAAAGTGCCATTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GQLRSVKNLSSGQDSASLRWTTH*KVPFSS Trigger: GGATGAGAATGGCACTTTCCAGTGTGTGGTCCATCT...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCCAGGCGTAGCAGATTaGAGGATGGATTGTCATATT | + |
|
Preference number: 4 (lower is better) Translates to: GQLRSVKNLSSGQDSASLPGVAD*RMDCHI Trigger: AATATGACAATCCATCCTTCAATCTGCTACGCCTGG...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR GCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTGACTTACAACCAGATTaGCTTTGCTCTCCTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSDLQPD*LCSPLW Trigger: CCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTC...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTCTTTGCTCTCCTCTGTaGCATATAACACCCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSLCSPL*HITPTV Trigger: GACTGTGGGTGTTATATGCCACAGAGGAGAGCAAAG...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR GCA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCGGCTTTAAGCTGAGCTaGCAGCTCCTGTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHSSISQTLTNTVFCFLIGFKLS*QLLCSF Trigger: GAAGGAGCACAGGAGCTGGCAGCTCAGCTTAAAGCC...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGTCTTTATTGAGTATGTCTTGAGCCACAGTCCCATCCATATCCCATGCGGTGTTCCTGCCCAGTaGTTGTGTCATAAGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QEVFIEYVLSHSPIHIPCGVPAQ*LCHKHK Trigger: TTTATGCTTATGACACAACCACTGGGCAGGAACACC...GCATGGGATATGGATGGGACTGTGGCTCAAGACATACTCAATAAAGACTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCAGGAAAGGTCCACCTTaGCCATGTCTCTTGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QHSSISQTLTNTVFCFLIRKGPP*PCLLCH Trigger: ATGGCACAAGAGACATGGCCAAGGTGGACCTTTCCT...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CCA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCGAGTTGTTGGGTAGATaGACCACACACTGGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHSSISQTLTNTVFCFLIELLGR*TTHWKV Trigger: CACTTTCCAGTGTGTGGTCCATCTACCCAACAACTC...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR GCA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCCTGGTATACCACGTTTaGTCAACTTCTAGGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QHSSISQTLTNTVFCFLILVYHV*STSRVL Trigger: TAGCACCCTAGAAGTTGAGCAAACGTGGTATACCAG...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR TCA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCTGTCTTGATCCTCAATaGCATGTACATATTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QHSSISQTLTNTVFCFLICLDPQ*HVHIPW Trigger: CCAAGGAATATGTACATGTCATTGAGGATCAAGACA...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS TCA 90 bp | TGGAGGAGGTCTGTGGCTCCACTGACACCTCCATTGGCTTTAAGCTaGGCTGCCAGCTCCTGTGCTCCTTCTAGCTCCAGGCGTAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: WRRSVAPLTPPLALS*AASSCAPSSSRRSR Trigger: TCTGCTACGCCTGGAGCTAGAAGGAGCACAGGAGCTGGCAGCTCAGCTTAAAGCCAATGGAGGTGTCAGTGGAGCCACAGACCTCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CCA 90 bp | TGGCCCTCAAGAATATCCACTTCCTCTCGGAGGGCATGGAAGCTTTaGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAGACTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WPSRISTSSRRAWKL*RAESTRSFRVRLAL Trigger: CAACGCCAGTCTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTTGAGGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 90 bp | TCACTTAGTTGGCCCTCAAGAATATCCACTTCCTCTCGGAGGGCATaGAAGCTTTGGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSWPSRISTSSRRA*KLWRAESTRSFRVR Trigger: TCTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTTGAGGGCCAACTAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 90 bp | CTCCATGAGCACAGGAACCAGGAGCCAGGGGTAGACCAGGGTGTCTaGAGGACTGTTCCTGTTCCTTTTCCCTCTCACACTCACTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHEHRNQEPGVDQGV*RTVPVPFPSHTHLV Trigger: AACTAAGTGAGTGTGAGAGGGAAAAGGAACAGGAACAGTCCTCCAGACACCCTGGTCTACCCCTGGCTCCTGGTTCCTGTGCTCATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS TCA 90 bp | GACGAGTGCTTAGTGAACGCAAAGCATAGAGCACCCCACAGACCATaGAGGCCCCTGAAAGAGCAGGCTTATACTGGCTGGTATACCACG | + |
|
Preference number: 5 (lower is better) Translates to: DECLVNAKHRAPHRP*RPLKEQAYTGWYTT Trigger: CGTGGTATACCAGCCAGTATAAGCCTGCTCTTTCAGGGGCCTTCATGGTCTGTGGGGTGCTCTATGCTTTGCGTTCACTAAGCACTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CCA 90 bp | CTGGAGGACTGTTCCTGTTCCTTTTCCCTCTCACACTCACTTAGTTaGCCCTCAAGAATATCCACTTCCTCTCGGAGGGCATGGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LEDCSCSFSLSHSLS*PSRISTSSRRAWKL Trigger: AAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTTGAGGGCCAACTAAGTGAGTGTGAGAGGGAAAAGGAACAGGAACAGTCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTAGAGTTTCCAGCATCTaGTCCAACAGGATGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLRSVKNLSSGQDSASLRVSSI*SNRMLR Trigger: CCTCAGCATCCTGTTGGACAAGATGCTGGAAACTCT...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS TCA 90 bp | ACTGGCTGGTATACCACGTTTGCTCAACTTCTAGGGTGCTATCATTaGGAAGACTTACAACCAGATTGCCTTTGCTCTCCTCTGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGWYTTFAQLLGCYH*EDLQPDCLCSPLWH Trigger: ATGCCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCTTCTCAATGATAGCACCCTAGAAGTTGAGCAAACGTGGTATACCAGCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS GCA 90 bp | AAGGCCCCTGAAAGAGCAGGCTTATACTGGCTGGTATACCACGTTTaGTCAACTTCTAGGGTGCTATCATTGAGAAGACTTACAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KAPERAGLYWLVYHV*STSRVLSLRRLTTR Trigger: TCTGGTTGTAAGTCTTCTCAATGATAGCACCCTAGAAGTTGAGCAAACGTGGTATACCAGCCAGTATAAGCCTGCTCTTTCAGGGGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CAA 90 bp | TCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTCTGGATGGATTGTCATATaGGGACACAGTGACACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVEVSEEFIFRPRFCLPSGWIVI*GHSDTQ Trigger: CTGGGTGTCACTGTGTCCCAATATGACAATCCATCC...AGAAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CAA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTACAACCAGATTGCCTTaGCTCTCCTCTGTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: GQLRSVKNLSSGQDSASLTTRLP*LSSVAY Trigger: ATATGCCACAGAGGAGAGCAAAGGCAATCTGGTTGT...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CAA 90 bp | GGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCCCTTGGCCCTGGACAGTTCTaGTTCATATTTGCTAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GQLRSVKNLSSGQDSASLGPGQF*FIFANE Trigger: CTCATTAGCAAATATGAACAAGAACTGTCCAGGGCC...AAGGGAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS TCA 90 bp | TCTTGTTCATATTTGCTAATGAGCTCCTGTAATGTACTCTGTAGCTaGTCCAGCTGCTGCAGGAAGATAGAGTTGTTGGGTAGATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SCSYLLMSSCNVLCS*SSCCRKIELLGRWT Trigger: GGTCCATCTACCCAACAACTCTATCTTCCTGCAGCAGCTGGATCAGCTACAGAGTACATTACAGGAGCTCATTAGCAAATATGAACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 90 bp | AGCTGCTGCAGGAAGATAGAGTTGTTGGGTAGATGGACCACACACTaGAAAGTGCCATTCTCATCCATAGAGTTTAATACATTTCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SCCRKIELLGRWTTH*KVPFSSIEFNTFLT Trigger: GGTGAGAAATGTATTAAACTCTATGGATGAGAATGGCACTTTCCAGTGTGTGGTCCATCTACCCAACAACTCTATCTTCCTGCAGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS-3UTR CAA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCGAGGAAAGGTCCACCTaGGCCATGTCTCTTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QHSSISQTLTNTVFCFLIEERST*AMSLVP Trigger: TGGCACAAGAGACATGGCCAAGGTGGACCTTTCCTC...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CAA 90 bp | TTAAGGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCAGACTTACAACCAGATaGCCTTTGCTCTCCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSVEVSEEFIFRPRFCLRLTTR*PLLSSV Trigger: CACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCT...GAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CAA 90 bp | TTAAGGTCAGTTGAGGTCAGTGAAGAATTTATCTTCAGGCCAAGATTCTGCCTCTCCAGGCGTAGCAGATaGAAGGATGGATTGTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LRSVEVSEEFIFRPRFCLSRRSR*KDGLSY Trigger: ATATGACAATCCATCCTTCAATCTGCTACGCCTGGA...GAGGCAGAATCTTGGCCTGAAGATAAATTCTTCACTGACCTCAACTGACCTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS-3UTR CAA 90 bp | CAGCATTCATCTATCTCCCAAACCCTAACTAACACTGTGTTTTGTTTCTTAATCTCTAGGGTGCTATCATaGAGAAGACTTACAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QHSSISQTLTNTVFCFLISRVLS*RRLTTR Trigger: TCTGGTTGTAAGTCTTCTCAATGATAGCACCCTAGA...GATTAAGAAACAAAACACAGTGTTAGTTAGGGTTTGGGAGATAGATGAATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS TCA 90 bp | TTTTCATGGGAGAGCTCGGTACCTTTTGCTTTAGTGTCAGGAAGGTaGGGTCATAATTTATTAAGAATCCATCATTATAAACATAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSWESSVPFALVSGR*GHNLLRIHHYKHRA Trigger: GGCTCTATGTTTATAATGATGGATTCTTAATAAATTATGACCTCACCTTCCTGACACTAAAGCAAAAGGTACCGAGCTCTCCCATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS TCA 72 bp | ACCACAAGGGGTCTGCTCACTTTCTGCAGGCCTCCATaGGCACAGGAACCAGGAGCCAGGGGTAGACCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TTRGLLTFCRPP*AQEPGARGRPG Trigger: CCCTGGTCTACCCCTGGCTCCTGGTTCCTGTGCTCATGGAGGCCTGCAGAAAGTGAGCAGACCCCTTGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 72 bp | GGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAGACTaGCGTTGGTCACCTGGTTCTGAAGTTGATGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GGQSRPEASGSD*RWSPGSEVDGG Trigger: TCCTCCATCAACTTCAGAACCAGGTGACCAACGCCAGTCTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CAA 90 bp | TTGGCCCTCAAGAATATCCACTTCCTCTCGGAGGGCATGGAAGCTTaGGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAGACTGGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LALKNIHFLSEGMEA*AGRVDQKLQGQTGV Trigger: AACGCCAGTCTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTTGAGGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS TCA 72 bp | TCTGTGGCTCCACTGACACCTCCATTGGCTTTAAGCTaGGCTGCCAGCTCCTGTGCTCCTTCTAGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVAPLTPPLALS*AASSCAPSSSR Trigger: CCTGGAGCTAGAAGGAGCACAGGAGCTGGCAGCTCAGCTTAAAGCCAATGGAGGTGTCAGTGGAGCCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CCA 72 bp | TGGCCCTCAAGAATATCCACTTCCTCTCGGAGGGCATaGAAGCTTTGGCGGGCAGAGTCGACCAGAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WPSRISTSSRRA*KLWRAESTRSF Trigger: GAAGCTTCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTTGAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 72 bp | CACAGGAACCAGGAGCCAGGGGTAGACCAGGGTGTCTaGAGGACTGTTCCTGTTCCTTTTCCCTCTCACACT | + |
|
Preference number: 6 (lower is better) Translates to: HRNQEPGVDQGV*RTVPVPFPSHT Trigger: AGTGTGAGAGGGAAAAGGAACAGGAACAGTCCTCCAGACACCCTGGTCTACCCCTGGCTCCTGGTTCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 72 bp | AAGGCGCAAAAGCATAGGAGAAGCGGTTGTTGTAGGTaGCACCAGGCAATGGGCGTCGCAGCACTAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: KAQKHRRSGCCR*HQAMGVAALGC Trigger: ACACCCTAGTGCTGCGACGCCCATTGCCTGGTGCCACCTACAACAACCGCTTCTCCTATGCTTTTGCGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 72 bp | AGAATATCCACTTCCTCTCGGAGGGCATGGAAGCTTTaGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RISTSSRRAWKL*RAESTRSFRVR Trigger: TCTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CAA 72 bp | AAGAATATCCACTTCCTCTCGGAGGGCATGGAAGCTTaGGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KNIHFLSEGMEA*AGRVDQKLQGQ Trigger: CTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCCAAAGCTTCCATGCCCTCCGAGAGGAAGTGGATATTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CAA 90 bp | CTTTGGCGGGCAGAGTCGACCAGAAGCTTCAGGGTCAGACTGGCGTaGGTCACCCTGGACAGTTCTTGTTCATATTTGCTAATGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LWRAESTRSFRVRLA*VTLDSSCSYLLMSS Trigger: GGAGCTCATTAGCAAATATGAACAAGAACTGTCCAGGGTGACCAACGCCAGTCTGACCCTGAAGCTTCTGGTCGACTCTGCCCGCCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154555.2 |
||
| CDS TCA 72 bp | TTAGTGAACGCAAAGCATAGAGCACCCCACAGACCATaGAGGCCCCTGAAAGAGCAGGCTTATACTGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LVNAKHRAPHRP*RPLKEQAYTGW Trigger: CCAGCCAGTATAAGCCTGCTCTTTCAGGGGCCTTCATGGTCTGTGGGGTGCTCTATGCTTTGCGTTCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CCA 72 bp | TCCAGGCGTAGCAGATTGAAGGATGGATTGTCATATTaGGACACAGTGACACCCAGATTCCTGGACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSRLKDGLSY*DTVTPRFLDSS Trigger: GCTGGAGTCCAGGAATCTGGGTGTCACTGTGTCCCAATATGACAATCCATCCTTCAATCTGCTACGCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CCA 72 bp | CAGACCATGAAGGCCCCTGAAAGAGCAGGCTTATACTaGCTGGTATACCACGTTTGCTCAACTTCTAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QTMKAPERAGLY*LVYHVCSTSRV Trigger: CACCCTAGAAGTTGAGCAAACGTGGTATACCAGCCAGTATAAGCCTGCTCTTTCAGGGGCCTTCATGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CAA 72 bp | CCTTCTAGCTCCAGGCGTAGCAGATTGAAGGATGGATaGTCATATTGGGACACAGTGACACCCAGATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSSSRRSRLKDG*SYWDTVTPRFL Trigger: CAGGAATCTGGGTGTCACTGTGTCCCAATATGACAATCCATCCTTCAATCTGCTACGCCTGGAGCTAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CCA 72 bp | TCCAGCTGCTGCAGGAAGATAGAGTTGTTGGGTAGATaGACCACACACTGGAAAGTGCCATTCTCATCCATA | + |
|
Preference number: 6 (lower is better) Translates to: SSCCRKIELLGR*TTHWKVPFSSI Trigger: TATGGATGAGAATGGCACTTTCCAGTGTGTGGTCCATCTACCCAACAACTCTATCTTCCTGCAGCAGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CCA 72 bp | GAAGACTTACAACCAGATTGCCTTTGCTCTCCTCTGTaGCATATAACACCCACAGTCCCTTCTCATCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: EDLQPDCLCSPL*HITPTVPSHHQ Trigger: CTGGTGATGAGAAGGGACTGTGGGTGTTATATGCCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CAA 90 bp | TACTGGCTGGTATACCACGTTTGCTCAACTTCTAGGGTGCTATCATaGAGAAGACTTACAACCAGATTGCCTTTGCTCTCCTCTGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: YWLVYHVCSTSRVLS*RRLTTRLPLLSSVA Trigger: TGCCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCTTCTCAATGATAGCACCCTAGAAGTTGAGCAAACGTGGTATACCAGCCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CAA 72 bp | GTGCTATCATTGAGAAGACTTACAACCAGATTGCCTTaGCTCTCCTCTGTGGCATATAACACCCACAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VLSLRRLTTRLP*LSSVAYNTHSP Trigger: GGGACTGTGGGTGTTATATGCCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCTTCTCAATGATAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS CAA 90 bp | ACTTCTAGGGTGCTATCATTGAGAAGACTTACAACCAGATTGCCTTaGCTCTCCTCTGTGGCATATAACACCCACAGTCCCTTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: TSRVLSLRRLTTRLP*LSSVAYNTHSPFSS Trigger: TGATGAGAAGGGACTGTGGGTGTTATATGCCACAGAGGAGAGCAAAGGCAATCTGGTTGTAAGTCTTCTCAATGATAGCACCCTAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051137.15 ENSMUST00000154555.2 |
||
| CDS TCA 72 bp | GACTCAGTTCTAGAGTCTGACTGTCTTGATCCTCAATaGCATGTACATATTCCTTGGCCCTGGACAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DSVLESDCLDPQ*HVHIPWPWTVL Trigger: AAGAACTGTCCAGGGCCAAGGAATATGTACATGTCATTGAGGATCAAGACAGTCAGACTCTAGAACTGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS GCA 72 bp | GAAAGAGCAGGCTTATACTGGCTGGTATACCACGTTTaGTCAACTTCTAGGGTGCTATCATTGAGAAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: ERAGLYWLVYHV*STSRVLSLRRL Trigger: AAGTCTTCTCAATGATAGCACCCTAGAAGTTGAGCAAACGTGGTATACCAGCCAGTATAAGCCTGCTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS CAA 72 bp | GTATACCACGTTTGCTCAACTTCTAGGGTGCTATCATaGAGAAGACTTACAACCAGATTGCCTTTGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VYHVCSTSRVLS*RRLTTRLPLLS Trigger: GGAGAGCAAAGGCAATCTGGTTGTAAGTCTTCTCAATGATAGCACCCTAGAAGTTGAGCAAACGTGGTATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||
| CDS GCA 72 bp | TTGTGTCATAAGCATAAAATATTTCTTCTTGACGAGTaGTTAGTGAACGCAAAGCATAGAGCACCCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LCHKHKIFLLDE*LVNAKHRAPHR Trigger: TCTGTGGGGTGCTCTATGCTTTGCGTTCACTAAGCACTCGTCAAGAAGAAATATTTTATGCTTATGACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051137.15 |
||