Pregenerated sensors for OLFM4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022026Ensembl transcript IDs: ENSMUST00000088735.4, ENSMUST00000228749.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATACACAGGTTTCAGGAGCCAGGAGGAAAACAAAGCTAAATATTTaGTCTCATGTCCACCTCCTGATGTTGATCTACCTAATTAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: YTQVSGARRKTKLNI*SHVHLLMLIYLIKP Trigger: GGGCTTAATTAGGTAGATCAACATCAGGAGGTGGACATGAGAGCAAATATTTAGCTTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTCCAAATTTACCTATCTaGTATACACAGGTTTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FKATRGSAPSMLSSGALIPNLPI*YTQVSG Trigger: TCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGG...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAATCATGCACAACTCAATaGTTCTATGTGGTGGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: AKFTYLLYTGFRSQEENKSCTTQ*FYVVGH Trigger: GTGACCCACCACATAGAACCATTGAGTTGTGCATGA...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR CAA 90 bp | AGGAAAACAAAGCTAAATATTTGCTCTCATGTCCACCTCCTGATGTaGATCTACCTAATTAAGCCCCAGCGTCCTTTCTGTCATGCACAA | + |
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Preference number: 2 (lower is better) Translates to: RKTKLNICSHVHLLM*IYLIKPQRPFCHAQ Trigger: TTGTGCATGACAGAAAGGACGCTGGGGCTTAATTAGGTAGATCAACATCAGGAGGTGGACATGAGAGCAAATATTTAGCTTTGTTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCTCAAGCGGTGCCCTGATTAAGCTGATACTACAAGGTGATTTCCTACATTCTCTACTAACATCATaGCTAAAGAAACACACTCCT | + |
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Preference number: 2 (lower is better) Translates to: MLSSGALIKLILQGDFLHSLLTS*LKKHTP Trigger: AGGAGTGTGTTTCTTTAGTCATGATGTTAGTAGAGA...ATGTAGGAAATCACCTTGTAGTATCAGCTTAATCAGGGCACCGCTTGAGAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAAGAAATGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATGGTTGCCCTGGACAAAGCTAAATATTTaGTCTCATGTCCACCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: VKKCDWLLSLFLILWLPWTKLNI*SHVHLL Trigger: CAGGAGGTGGACATGAGAGCAAATATTTAGCTTTGT...CCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACATTTCTTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR CCA 72 bp | TGGTTGTTAAGTCTGTTTCTAATCTTATGGTTGCCCTaGGACCTGAATTATGAGGTAAAGGGGTCTACTGAA | + |
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Preference number: 3 (lower is better) Translates to: WLLSLFLILWLP*DLNYEVKGSTE Trigger: TTCAGTAGACCCCTTTACCTCATAATTCAGGTCCCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR CCA 72 bp | AAATGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATaGTTGCCCTGGGACCTGAATTATGAGGTAAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: KCDWLLSLFLIL*LPWDLNYEVKG Trigger: CCCCTTTACCTCATAATTCAGGTCCCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR GCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTCACAGTCCCACCTTCTaGCCAAGAAGTGCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALIHSPTF*PRSASR Trigger: CCGGGAGGCACTTCTTGGGCAGAAGGTGGGACTGTG...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTGAGCCAAGGCAGAACTaGAGGGCCAGGAGAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALIEPRQN*RARRKR Trigger: TCTCTTTCTCCTGGCCCTTCAGTTCTGCCTTGGCTC...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTTGCTGTCCTTCTCCATaGCCTCTACTCGGACCGTCA | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALICCPSP*PLLGPS Trigger: TGACGGTCCGAGTAGAGGTCATGGAGAAGGACAGCA...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTAGTGAAATTGGAAAGTaGCTGAGACACAGTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALISEIGK*LRHSPT Trigger: GGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACT...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTCATACAGGTTGTTGTTaGATGCTACTGTACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALIHTGCC*MLLYHL Trigger: GAGGTGGTACAGTAGCATTCAACAACAACCTGTATG...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTGCACAAGGTCACTTTTaGAGGCCTCACATTCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALIAQGHF*RPHILS Trigger: TGAAAGAATGTGAGGCCTCCAAAAGTGACCTTGTGC...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTGGCATTCGAAACAGATaGCTTGTACTGCTTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: FKATRGSAPSMLSSGALIGIRNR*LVLLGN Trigger: GTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCC...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | ATGCTCTCAAGCGGTGCCCTGATTAAGCTGATACTACAAGGTGATTTCCTACATAGCTGTAGCCTGGGGTaGTGTTGGAGGTGTGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: MLSSGALIKLILQGDFLHSCSLG*CWRCGQ Trigger: TTGACCACACCTCCAACATCACCCCAGGCTACAGCT...ATGTAGGAAATCACCTTGTAGTATCAGCTTAATCAGGGCACCGCTTGAGAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | ATGCTCTCAAGCGGTGCCCTGATTAAGCTGATACTACAAGGTGATTTCCTACATAGGGAAACAGAACACTaGCAGGTCCCATGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: MLSSGALIKLILQGDFLHRETEH*QVPWLS Trigger: GGACAGCCATGGGACCTGCCAGTGTTCTGTTTCCCT...ATGTAGGAAATCACCTTGTAGTATCAGCTTAATCAGGGCACCGCTTGAGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAACAGGAGGAGGGGGTGTaGCAGGCACAAGGTCACTTT | + |
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Preference number: 4 (lower is better) Translates to: AKFTYLLYTGFRSQEENKQEEGV*QAQGHF Trigger: AAAGTGACCTTGTGCCTGCCACACCCCCTCCTCCTG...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | CCCAGAATTCATACTAAGTACCCCTTAAGTTCTTTATCTTCTAGACTTTACCTCCACTGGCAGGTCCCATaGCTGTCCACAGACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PRIHTKYPLSSLSSRLYLHWQVP*LSTDPV Trigger: CACTGGGTCTGTGGACAGCCATGGGACCTGCCAGTG...GAGGTAAAGTCTAGAAGATAAAGAACTTAAGGGGTACTTAGTATGAATTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAATGTCCACAGACCCAGTaGAATTGGAAAGTGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKCPQTQ*NWKVAE Trigger: CTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACA...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | ATGCTCTCAAGCGGTGCCCTGATTAAGCTGATACTACAAGGTGATTTCCTACATCCTTCACTTCCAGCTTaGTCAACTCAAAGTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: MLSSGALIKLILQGDFLHPSLPA*STQSPV Trigger: AACTGGACTTTGAGTTGATCAAGCTGGAAGTGAAGG...ATGTAGGAAATCACCTTGTAGTATCAGCTTAATCAGGGCACCGCTTGAGAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | GAGAGATATCATTTAAGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGCCCAGCCAGTTGAGCTaGATCACAGAAGGAGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ERYHLRCQIYLSAIHRFQPSQLS*ITEGAL Trigger: CAGCGCTCCTTCTGTGATTCAGCTCAACTGGCTGGG...CTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCTTAAATGATATCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAAGTACAGGGTTCTCTCTaGATGCTGAGGAGAGTAATC | + |
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Preference number: 4 (lower is better) Translates to: AKFTYLLYTGFRSQEENKVQGSL*MLRRVI Trigger: GATTACTCTCCTCAGCATCCAGAGAGAACCCTGTAC...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR CAA 72 bp | GGTTTCAGGAGCCAGGAGGAAAACAAAGCTAAATATTaGCTCTCATGTCCACCTCCTGATGTTGATCTACCT | + |
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Preference number: 4 (lower is better) Translates to: GFRSQEENKAKY*LSCPPPDVDLP Trigger: AGGTAGATCAACATCAGGAGGTGGACATGAGAGCAAATATTTAGCTTTGTTTTCCTCCTGGCTCCTGAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAAGAACTCCACATACCATaGAGGCATTCGAAACAGATG | + |
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Preference number: 4 (lower is better) Translates to: AKFTYLLYTGFRSQEENKELHIP*RHSKQM Trigger: CATCTGTTTCGAATGCCTTCATGGTATGTGGAGTTC...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | GTAAAGAAATGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATGGTTGCCCTGGGCATCTTTCTCATTGTaGTGCCTAGGTTGCCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: VKKCDWLLSLFLILWLPWASFSL*CLGCLP Trigger: GGGAAGGCAACCTAGGCATCACAATGAGAAAGATGC...CCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACATTTCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR GCA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAACTCAGTTGCATAAATTaGCCACAGTGCTTGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: AKFTYLLYTGFRSQEENKLSCIN*PQCLLI Trigger: GATGAGCAAGCACTGTGGGCAATTTATGCAACTGAG...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| 3UTR CAA 72 bp | TGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATGGTaGCCCTGGGACCTGAATTATGAGGTAAAGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CDWLLSLFLILW*PWDLNYEVKGS Trigger: AGACCCCTTTACCTCATAATTCAGGTCCCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | GTAAAGAAATGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATGGTTGCCCTGGAAATTGGAAAGTGGCTaGGACACAGTCCCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VKKCDWLLSLFLILWLPWKLESG*DTVPPS Trigger: AGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTT...CCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACATTTCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACACATTCTTTCAGCTTaGTCTTCAGAGCCAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKHILSA*SSEPRS Trigger: AGATCTTGGCTCTGAAGACCAAGCTGAAAGAATGTG...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CCA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACTATGTTACCAGTGCTaGCCTCAGTTGCATAAATTG | + |
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Preference number: 4 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKLCYQC*PQLHKL Trigger: CAATTTATGCAACTGAGGCCAGCACTGGTAACATAG...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAAGGGATGGTAATTaGTGCTCTGAATTCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKQRDGN*CSEFFP Trigger: AGGAAAGAATTCAGAGCATCAATTACCATCCCTTTG...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR GCA 90 bp | GAGAGATATCATTTAAGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGATTGCCCACAGTGCTTaGTCATCCACAGCAAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ERYHLRCQIYLSAIHRFQIAHSA*SSTARS Trigger: TGACCTTGCTGTGGATGAGCAAGCACTGTGGGCAAT...CTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCTTAAATGATATCTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR TCA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAAATTCACATTAGCATATaGGAAGCGATTATTGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKIHISI*EAIIVG Trigger: GCCTACAATAATCGCTTCTCATATGCTAATGTGAAT...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR GCA 90 bp | CCCAGAATTCATACTAAGTACCCCTTAAGTTCTTTATCTTCTAGACTTTACCTCATCTGTATTCAAAGGTaGCACCCAGTACAGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PRIHTKYPLSSLSSRLYLICIQR*HPVQGS Trigger: AGAACCCTGTACTGGGTGGCACCTTTGAATACAGAT...GAGGTAAAGTCTAGAAGATAAAGAACTTAAGGGGTACTTAGTATGAATTCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR GCA 90 bp | GAGAGATATCATTTAAGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGTCACTATGTTACCAGTaGTGGCCTCAGTTGCATAAA | + |
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Preference number: 4 (lower is better) Translates to: ERYHLRCQIYLSAIHRFQSLCYQ*WPQLHK Trigger: TTTATGCAACTGAGGCCAGCACTGGTAACATAGTGA...CTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCTTAAATGATATCTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS TCA 90 bp | CAGGTCCCATGGCTGTCCACAGACCCAGTGAAATTGGAAAGTGGCTaGGACACAGTCCCACCTTCTGCCCAAGAAGTGCCTCCCGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: QVPWLSTDPVKLESG*DTVPPSAQEVPPGG Trigger: GCCTCCGGGAGGCACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACAGCCATGGGACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 90 bp | CTGGCAGGTCCCATGGCTGTCCACAGACCCAGTGAAATTGGAAAGTaGCTGAGACACAGTCCCACCTTCTGCCCAAGAAGTGCCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LAGPMAVHRPSEIGK*LRHSPTFCPRSASR Trigger: CCGGGAGGCACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACAGCCATGGGACCTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS GCA 90 bp | AGACCCAGTGAAATTGGAAAGTGGCTGAGACACAGTCCCACCTTCTaGCCAAGAAGTGCCTCCCGGAGGCAACCAGGCAGCTGTAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: RPSEIGKWLRHSPTF*PRSASRRQPGSCSL Trigger: CAGGCTACAGCTGCCTGGTTGCCTCCGGGAGGCACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 90 bp | CCACGCCACCATGACTACAGCTTCCAGGAGCAGGAGGAGGGGGTGTaGCAGGCACAAGGTCACTTTTGGAGGCCTCACATTCTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PRHHDYSFQEQEEGV*QAQGHFWRPHILSA Trigger: AGCTGAAAGAATGTGAGGCCTCCAAAAGTGACCTTGTGCCTGCCACACCCCCTCCTCCTGCTCCTGGAAGCTGTAGTCATGGTGGCGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTGTGCAGAGGTCAGAGTaGTCCGGGAGGCAGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: FKATRGSAPSMLSSGALIVQRSE*SGRQSQ Trigger: TTGGCTCTGCCTCCCGGACAACTCTGACCTCTGCAC...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS TCA 90 bp | GGGAAACAGAACACTGGCAGGTCCCATGGCTGTCCACAGACCCAGTaGAATTGGAAAGTGGCTGAGACACAGTCCCACCTTCTGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GKQNTGRSHGCPQTQ*NWKVAETQSHLLPK Trigger: CTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACAGCCATGGGACCTGCCAGTGTTCTGTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 90 bp | ACTCTGTCAGCGGGAAAGGCGGTATCCGGCAGGGAAACAGAACACTaGCAGGTCCCATGGCTGTCCACAGACCCAGTGAAATTGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TLSAGKAVSGRETEH*QVPWLSTDPVKLES Trigger: ACTTTCCAATTTCACTGGGTCTGTGGACAGCCATGGGACCTGCCAGTGTTCTGTTTCCCTGCCGGATACCGCCTTTCCCGCTGACAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 90 bp | TTCCAGCTGCTCCTAACAGCTTTCCAGGAGCAGGAGGAGGGGGTGTaGCAGGCACAAGGTCACTTTTGGAGGCCTCACATTCTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: FQLLLTAFQEQEEGV*QAQGHFWRPHILSA Trigger: AGCTGAAAGAATGTGAGGCCTCCAAAAGTGACCTTGTGCCTGCCACACCCCCTCCTCCTGCTCCTGGAAAGCTGTTAGGAGCAGCTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088735.4 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTGATGGCTTGTACTGCTaGGTAACCCAAGTGCTTATC | + |
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Preference number: 5 (lower is better) Translates to: FKATRGSAPSMLSSGALIDGLYC*VTQVLI Trigger: GATAAGCACTTGGGTTACCAAGCAGTACAAGCCATC...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS TCA 90 bp | TCAACTCAAAGTCCAGTTCTGTGTAAGAGATGCTGTCCTTCTCCATaGCCTCTACTCGGACCGTCAGGTTCAGGAGCCTCTTCTCATACA | + |
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Preference number: 5 (lower is better) Translates to: STQSPVLCKRCCPSP*PLLGPSGSGASSHT Trigger: TGTATGAGAAGAGGCTCCTGAACCTGACGGTCCGAGTAGAGGTCATGGAGAAGGACAGCATCTCTTACACAGAACTGGACTTTGAGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 90 bp | GTCTTCAGAGCCAAGATCTGGCGGCGAATGCTAAGGACATTGTTTTaGTCTAGAGACTCCAGCTTCTCTACCAAGAGGGTCATATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFRAKIWRRMLRTLF*SRDSSFSTKRVIFL Trigger: AAGGAATATGACCCTCTTGGTAGAGAAGCTGGAGTCTCTAGACCAAAACAATGTCCTTAGCATTCGCCGCCAGATCTTGGCTCTGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | TTCAAAGCCACCAGAGGATCTGCACCTAGCATGCTCTCAAGCGGTGCCCTGATTTTCACATACAGGTTGTaGTTGAATGCTACTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: FKATRGSAPSMLSSGALIFTYRL*LNATVP Trigger: TGGTACAGTAGCATTCAACAACAACCTGTATGTGAA...AATCAGGGCACCGCTTGAGAGCATGCTAGGTGCAGATCCTCTGGTGGCTTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAAAATTGCCCACAGTGCTaGCTCATCCACAGCAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKNCPQC*LIHSKV Trigger: GACCTTGCTGTGGATGAGCAAGCACTGTGGGCAATT...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS GCA 90 bp | AGAACTCCACATACCATGAAGGCATTCGAAACAGATGGCTTGTACTaGTTGGTAACCCAAGTGCTTATCACCTCAAGAGTGGTGTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: RTPHTMKAFETDGLY*LVTQVLITSRVVSL Trigger: CAATGACACCACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGTATGTGGAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACCTCAGTTGCATAAATaGCCCACAGTGCTTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKPQLHK*PTVLAH Trigger: ATGAGCAAGCACTGTGGGCAATTTATGCAACTGAGG...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS TCA 90 bp | TCTTCAGCTGTAAGACCAGTTTTTGCATCTCCTTCACTTCCAGCTTaGTCAACTCAAAGTCCAGTTCTGTGTAAGAGATGCTGTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSAVRPVFASPSLPA*STQSPVLCKRCCPS Trigger: AGAAGGACAGCATCTCTTACACAGAACTGGACTTTGAGTTGATCAAGCTGGAAGTGAAGGAGATGCAAAAACTGGTCTTACAGCTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 90 bp | AGTAGCATAAAGAACTCCACATACCATGAAGGCATTCGAAACAGATaGCTTGTACTGCTTGGTAACCCAAGTGCTTATCACCTCAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSIKNSTYHEGIRNR*LVLLGNPSAYHLKS Trigger: ACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGTATGTGGAGTTCTTTATGCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | AGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAATCCTTCACTTCCAGCTaGATCAACTCAAAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCQIYLSAIHRFQEPGGKSFTSS*INSKSS Trigger: ACTGGACTTTGAGTTGATCAAGCTGGAAGTGAAGGA...TTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAATTCGAAACAGATGGCTaGTACTGCTTGGTAACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: AKFTYLLYTGFRSQEENKFETDG*YCLVTQ Trigger: TTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAA...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | CCCAGAATTCATACTAAGTACCCCTTAAGTTCTTTATCTTCTAGACTTTACCTCGGCACAAGGTCACTTTaGGAGGCCTCACATTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRIHTKYPLSSLSSRLYLGTRSL*EASHSF Trigger: GAAAGAATGTGAGGCCTCCAAAAGTGACCTTGTGCC...GAGGTAAAGTCTAGAAGATAAAGAACTTAAGGGGTACTTAGTATGAATTCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | GTAAAGAAATGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATGGTTGCCCTGGCGAATGCTAAGGACATaGTTTTGGTCTAGAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKKCDWLLSLFLILWLPWRMLRT*FWSRDS Trigger: GGAGTCTCTAGACCAAAACAATGTCCTTAGCATTCG...CCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACATTTCTTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | GTAAAGAAATGTGACTGGTTGTTAAGTCTGTTTCTAATCTTATGGTTGCCCTGGTCACATTCTTTCAGCTaGGTCTTCAGAGCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VKKCDWLLSLFLILWLPWSHSFS*VFRAKI Trigger: GATCTTGGCTCTGAAGACCAAGCTGAAAGAATGTGA...CCAGGGCAACCATAAGATTAGAAACAGACTTAACAACCAGTCACATTTCTTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | GCCAAATTTACCTATCTGCTATACACAGGTTTCAGGAGCCAGGAGGAAAACAAAAGCAAGGTCAATGTCTaGCCAATTCACATTAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: AKFTYLLYTGFRSQEENKSKVNV*PIHISI Trigger: TATGCTAATGTGAATTGGCAAGACATTGACCTTGCT...TTTGTTTTCCTCCTGGCTCCTGAAACCTGTGTATAGCAGATAGGTAAATTTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | ATGCTCTCAAGCGGTGCCCTGATTAAGCTGATACTACAAGGTGATTTCCTACATCTTCCCTCTCTGTGTTaGTGTCATAATAGTAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MLSSGALIKLILQGDFLHLPSLC*CHNSKR Trigger: TCTTTTACTATTATGACACAAACACAGAGAGGGAAG...ATGTAGGAAATCACCTTGTAGTATCAGCTTAATCAGGGCACCGCTTGAGAGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS GCA 90 bp | TGTGTACTTCCAACAAAATTCTTCTTCAGCTGTAAGACCAGTTTTTaGATCTCCTTCACTTCCAGCTTGATCAACTCAAAGTCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVLPTKFFFSCKTSF*ISFTSSLINSKSSS Trigger: AGAACTGGACTTTGAGTTGATCAAGCTGGAAGTGAAGGAGATGCAAAAACTGGTCTTACAGCTGAAGAAGAATTTTGTTGGAAGTACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | GAGAGATATCATTTAAGATGCCAAATTTACCTATCTGCTATACACAGGTTTCAGATTGTGATGCCTAGGTaGCCTTCCCTCTCTGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ERYHLRCQIYLSAIHRFQIVMPR*PSLSVF Trigger: AAACACAGAGAGGGAAGGCAACCTAGGCATCACAAT...CTGAAACCTGTGTATAGCAGATAGGTAAATTTGGCATCTTAAATGATATCTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS-3UTR CAA 90 bp | CCCAGAATTCATACTAAGTACCCCTTAAGTTCTTTATCTTCTAGACTTTACCTCTCAAGAGTGGTGTCATaGAGTTTACTAATCACTATG | + |
|
Preference number: 5 (lower is better) Translates to: PRIHTKYPLSSLSSRLYLSRVVS*SLLITM Trigger: CATAGTGATTAGTAAACTCAATGACACCACTCTTGA...GAGGTAAAGTCTAGAAGATAAAGAACTTAAGGGGTACTTAGTATGAATTCTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS TCA 72 bp | GCCTCCCGGAGGCAACCAGGCAGCTGTAGCCTGGGGTaGTGTTGGAGGTGTGGTCAATTCCCGGGAATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRRQPGSCSLG*CWRCGQFPGMC Trigger: GCACATTCCCGGGAATTGACCACACCTCCAACATCACCCCAGGCTACAGCTGCCTGGTTGCCTCCGGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 72 bp | GCGGGAAAGGCGGTATCCGGCAGGGAAACAGAACACTaGCAGGTCCCATGGCTGTCCACAGACCCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AGKAVSGRETEH*QVPWLSTDPVK Trigger: TTTCACTGGGTCTGTGGACAGCCATGGGACCTGCCAGTGTTCTGTTTCCCTGCCGGATACCGCCTTTCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS GCA 72 bp | GAAATTGGAAAGTGGCTGAGACACAGTCCCACCTTCTaGCCAAGAAGTGCCTCCCGGAGGCAACCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EIGKWLRHSPTF*PRSASRRQPGS Trigger: GCTGCCTGGTTGCCTCCGGGAGGCACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 90 bp | ATGTTGGAGGTGTGGTCAATTCCCGGGAATGTGCAGAGGTCAGAGTaGTCCGGGAGGCAGAGCCAAGGCAGAACTGAAGGGCCAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MLEVWSIPGNVQRSE*SGRQSQGRTEGPGE Trigger: TTCTCCTGGCCCTTCAGTTCTGCCTTGGCTCTGCCTCCCGGACAACTCTGACCTCTGCACATTCCCGGGAATTGACCACACCTCCAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 72 bp | CATGACTACAGCTTCCAGGAGCAGGAGGAGGGGGTGTaGCAGGCACAAGGTCACTTTTGGAGGCCTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: HDYSFQEQEEGV*QAQGHFWRPHI Trigger: AATGTGAGGCCTCCAAAAGTGACCTTGTGCCTGCCACACCCCCTCCTCCTGCTCCTGGAAGCTGTAGTCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228749.2 |
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| CDS CCA 72 bp | TGTATTCAAAGGTGCCACCCAGTACAGGGTTCTCTCTaGATGCTGAGGAGAGTAATCTCGGCCCCAGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: CIQRCHPVQGSL*MLRRVISAPGT Trigger: GGTGCCTGGGGCCGAGATTACTCTCCTCAGCATCCAGAGAGAACCCTGTACTGGGTGGCACCTTTGAATACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS TCA 72 bp | TGGCTGTCCACAGACCCAGTGAAATTGGAAAGTGGCTaGGACACAGTCCCACCTTCTGCCCAAGAAGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: WLSTDPVKLESG*DTVPPSAQEVP Trigger: AGGCACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS TCA 72 bp | AACACTGGCAGGTCCCATGGCTGTCCACAGACCCAGTaGAATTGGAAAGTGGCTGAGACACAGTCCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: NTGRSHGCPQTQ*NWKVAETQSHL Trigger: AAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACAGCCATGGGACCTGCCAGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 72 bp | CCCATGGCTGTCCACAGACCCAGTGAAATTGGAAAGTaGCTGAGACACAGTCCCACCTTCTGCCCAAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: PMAVHRPSEIGK*LRHSPTFCPRS Trigger: ACTTCTTGGGCAGAAGGTGGGACTGTGTCTCAGCCACTTTCCAATTTCACTGGGTCTGTGGACAGCCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS TCA 72 bp | AGTCCAGTTCTGTGTAAGAGATGCTGTCCTTCTCCATaGCCTCTACTCGGACCGTCAGGTTCAGGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPVLCKRCCPSP*PLLGPSGSGAS Trigger: AGAGGCTCCTGAACCTGACGGTCCGAGTAGAGGTCATGGAGAAGGACAGCATCTCTTACACAGAACTGGACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 90 bp | GTGGCAGGCACAAGGTCACTTTTGGAGGCCTCACATTCTTTCAGCTaGGTCTTCAGAGCCAAGATCTGGCGGCGAATGCTAAGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: VAGTRSLLEASHSFS*VFRAKIWRRMLRTL Trigger: CAATGTCCTTAGCATTCGCCGCCAGATCTTGGCTCTGAAGACCAAGCTGAAAGAATGTGAGGCCTCCAAAAGTGACCTTGTGCCTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 72 bp | ACAAGGTCACTTTTGGAGGCCTCACATTCTTTCAGCTaGGTCTTCAGAGCCAAGATCTGGCGGCGAATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TRSLLEASHSFS*VFRAKIWRRML Trigger: TAGCATTCGCCGCCAGATCTTGGCTCTGAAGACCAAGCTGAAAGAATGTGAGGCCTCCAAAAGTGACCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS TCA 72 bp | CACCACGCCACCATGACTACAGCTTCCAAGGGCCAATaGAACATTTTGCGTGTGCTGGTGGAAAAGAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: HHATMTTASKGQ*NILRVLVEKRK Trigger: TTTTCTCTTTTCCACCAGCACACGCAAAATGTTTCATTGGCCCTTGGAAGCTGTAGTCATGGTGGCGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088735.4 |
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| CDS GCA 72 bp | CCCATTGTACCAATTCACATACAGGTTGTTGTTGAATaGTACTGTACCACCTCCTTGGCCATAGCGAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: PIVPIHIQVVVE*YCTTSLAIANP Trigger: CGGATTCGCTATGGCCAAGGAGGTGGTACAGTAGCATTCAACAACAACCTGTATGTGAATTGGTACAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 72 bp | CCAATGAGTCGTAAAGTCTGTAATACTCTAGAGCCCTaGCATCTGTATTCAAAGGTGCCACCCAGTACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PMSRKVCNTLEP*HLYSKVPPSTG Trigger: CCCTGTACTGGGTGGCACCTTTGAATACAGATGCAAGGGCTCTAGAGTATTACAGACTTTACGACTCATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 72 bp | ACCATGAAGGCATTCGAAACAGATGGCTTGTACTGCTaGGTAACCCAAGTGCTTATCACCTCAAGAGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TMKAFETDGLYC*VTQVLITSRVV Trigger: CACCACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 90 bp | ACTCCACATACCATGAAGGCATTCGAAACAGATGGCTTGTACTGCTaGGTAACCCAAGTGCTTATCACCTCAAGAGTGGTGTCATTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TPHTMKAFETDGLYC*VTQVLITSRVVSLS Trigger: ACTCAATGACACCACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGTATGTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS GCA 72 bp | TTTACTAATCACTATGTTACCAGTGCTGGCCTCAGTTaGATAAATTGCCCACAGTGCTTGCTCATCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTNHYVTSAGLS*INCPQCLLIHS Trigger: GCTGTGGATGAGCAAGCACTGTGGGCAATTTATGCAACTGAGGCCAGCACTGGTAACATAGTGATTAGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS GCA 72 bp | CATACCATGAAGGCATTCGAAACAGATGGCTTGTACTaGTTGGTAACCCAAGTGCTTATCACCTCAAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: HTMKAFETDGLY*LVTQVLITSRV Trigger: CACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 72 bp | TCACATTCTTTCAGCTTGGTCTTCAGAGCCAAGATCTaGCGGCGAATGCTAAGGACATTGTTTTGGTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SHSFSLVFRAKI*RRMLRTLFWSR Trigger: TCTAGACCAAAACAATGTCCTTAGCATTCGCCGCCAGATCTTGGCTCTGAAGACCAAGCTGAAAGAATGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 72 bp | ACTCCACATACCATGAAGGCATTCGAAACAGATGGCTaGTACTGCTTGGTAACCCAAGTGCTTATCACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPHTMKAFETDG*YCLVTQVLITS Trigger: TGAGGTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGTATGTGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 90 bp | ACAAATTGTCCAATGAGTCGTAAAGTCTGTAATACTCTAGAGCCCTaGCATCTGTATTCAAAGGTGCCACCCAGTACAGGGTTCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TNCPMSRKVCNTLEP*HLYSKVPPSTGFSL Trigger: CAGAGAGAACCCTGTACTGGGTGGCACCTTTGAATACAGATGCAAGGGCTCTAGAGTATTACAGACTTTACGACTCATTGGACAATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CAA 90 bp | TACTGCTTGGTAACCCAAGTGCTTATCACCTCAAGAGTGGTGTCATaGAGTTTACTAATCACTATGTTACCAGTGCTGGCCTCAGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: YCLVTQVLITSRVVS*SLLITMLPVLASVA Trigger: TGCAACTGAGGCCAGCACTGGTAACATAGTGATTAGTAAACTCAATGACACCACTCTTGAGGTGATAAGCACTTGGGTTACCAAGCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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| CDS CCA 72 bp | AGGTTCAGGAGCCTCTTCTCATACACACTTATTAGCTaGACATACTCCTTCACCTTAGAAAACTCTCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RFRSLFSYTLIS*TYSFTLENSLS Trigger: CGAGAGAGAGTTTTCTAAGGTGAAGGAGTATGTCCAGCTAATAAGTGTGTATGAGAAGAGGCTCCTGAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
||
| CDS CCA 72 bp | AAGAACTCCACATACCATGAAGGCATTCGAAACAGATaGCTTGTACTGCTTGGTAACCCAAGTGCTTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: KNSTYHEGIRNR*LVLLGNPSAYH Trigger: GTGATAAGCACTTGGGTTACCAAGCAGTACAAGCCATCTGTTTCGAATGCCTTCATGGTATGTGGAGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
||
| CDS CAA 72 bp | GTAACCCAAGTGCTTATCACCTCAAGAGTGGTGTCATaGAGTTTACTAATCACTATGTTACCAGTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VTQVLITSRVVS*SLLITMLPVLA Trigger: GGCCAGCACTGGTAACATAGTGATTAGTAAACTCAATGACACCACTCTTGAGGTGATAAGCACTTGGGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
||
| CDS TCA 72 bp | GTAAGACCAGTTTTTGCATCTCCTTCACTTCCAGCTTaGTCAACTCAAAGTCCAGTTCTGTGTAAGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: VRPVFASPSLPA*STQSPVLCKRC Trigger: GCATCTCTTACACAGAACTGGACTTTGAGTTGATCAAGCTGGAAGTGAAGGAGATGCAAAAACTGGTCTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
||
| CDS GCA 72 bp | CACAGTGCTTGCTCATCCACAGCAAGGTCAATGTCTTaGCAATTCACATTAGCATATGAGAAGCGATTATTG | + |
|
Preference number: 6 (lower is better) Translates to: HSACSSTARSMS*QFTLAYEKRLL Trigger: CAATAATCGCTTCTCATATGCTAATGTGAATTGGCAAGACATTGACCTTGCTGTGGATGAGCAAGCACTGTG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088735.4 ENSMUST00000228749.2 |
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