Pregenerated sensors for OLAH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026645Ensembl transcript IDs: ENSMUST00000027955.11, ENSMUST00000115087.4, ENSMUST00000194918.6
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTaGTCCACTTCAGCCCGTGTCCTTTCCCCAGAGATAAATGTTCCA | + |
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Preference number: 1 (lower is better) Translates to: PTPLPSATVNAQQCR*STSARVLSPEINVP Trigger: TGGAACATTTATCTCTGGGGAAAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR GCA 90 bp | TATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTaGAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCG | + |
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Preference number: 1 (lower is better) Translates to: YWWQSLPKKTHPSSL*NCQRPTMPLLHFSP Trigger: CGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR CCA 90 bp | CTACACGGTGTGGTGTCATTTACTGGAGGCTGGGTAACCTATTGGTaGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: LHGVVSFTGGWVTYW*QSLPKKTHPSSLCN Trigger: GTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAGGTTACCCAGCCTCCAGTAAATGACACCACACCGTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR GCA 72 bp | CAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTaGAACTGTCAACGCCCAACAATGCCGCTGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: QSLPKKTHPSSL*NCQRPTMPLLH Trigger: GTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR-3UTR CAA 90 bp | GTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTCCCCAGAGCAGCCTGTGATCAGTTaGCATATTAGAAACCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: VNAQQCRCSTSARVLSPEQPVIS*HIRNPR Trigger: TCTGGGGTTTCTAATATGCAAACTGATCACAGGCTG...CTCTGGGGAAAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR-3UTR CAA 90 bp | TCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCAGCCTGTGATCAGTTaGCATATTAGAAACCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLCNCQRPTMPLLHFSPCQPVIS*HIRNPR Trigger: TCTGGGGTTTCTAATATGCAAACTGATCACAGGCTG...ACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR CCA 72 bp | GGTGTGGTGTCATTTACTGGAGGCTGGGTAACCTATTaGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GVVSFTGGWVTY*WQSLPKKTHPS Trigger: AGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAGGTTACCCAGCCTCCAGTAAATGACACCACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACACAGCCTGTGATCAGTTaGCATATTAGAAACCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLPKKTHPSSLCNCQRPTQPVIS*HIRNPR Trigger: TCTGGGGTTTCTAATATGCAAACTGATCACAGGCTG...TGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| 3UTR TCA 72 bp | TTCTTTGAAATTTTCCTAAGTGTAAACTGTGCATTTTaGTCATACCCACTTCCCGCTGGCCTTTCCAACCCC | + |
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Preference number: 3 (lower is better) Translates to: FFEIFLSVNCAF*SYPLPAGLSNP Trigger: GGGGTTGGAAAGGCCAGCGGGAAGTGGGTATGATCAAAATGCACAGTTTACACTTAGGAAAATTTCAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027955.11 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCAGTGGAGCCGCCTCCTaGCCAGGGAAAGCAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLSGAAS*PGKADQ Trigger: CTGATCTGCTTTCCCTGGGCAGGAGGCGGCTCCACT...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | GTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTCCCCAGAGGAGGGGCAGAGGCACTaGACACAAAGATATGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VNAQQCRCSTSARVLSPEEGQRH*TQRYAA Trigger: CGCTGCATATCTTTGTGTCCAGTGCCTCTGCCCCTC...CTCTGGGGAAAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | GGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCAGTGGAGCCGCCTCCTaGCCAGGGAAAGCAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: GKVSQRKPTPLPSATVNASGAAS*PGKADQ Trigger: CTGATCTGCTTTCCCTGGGCAGGAGGCGGCTCCACT...GGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCACTTGGCAAAATGAGTaGAGCCGCCTCCTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RKPTPLPSATVNAQQCRCTWQNE*SRLLPR Trigger: CCTGGGCAGGAGGCGGCTCCACTCATTTTGCCAAGT...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR TCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTGGTCACCTGGCAGCTTaGGGACATCAAACTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLGHLAA*GHQTSH Trigger: GTGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACC...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR TCA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCGGTCACCTGGCAGCTTaGGGACATCAAACTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RKPTPLPSATVNAQQCRCGHLAA*GHQTSH Trigger: GTGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACC...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTCTTTCGGCCCCACTTaGCAAAATGAGTGGAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLSFGPT*QNEWSR Trigger: GCGGCTCCACTCATTTTGCCAAGTGGGGCCGAAAGA...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCGAGGGGCAGAGGCACTaGACACAAAGATATGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RKPTPLPSATVNAQQCRCEGQRH*TQRYAA Trigger: CGCTGCATATCTTTGTGTCCAGTGCCTCTGCCCCTC...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGAGTGGAGCCGCCTCCTaGCCAGGGAAAGCAGATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLVAKSPKENPPLFPLQLSGAAS*PGKADQ Trigger: CTGATCTGCTTTCCCTGGGCAGGAGGCGGCTCCACT...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAAACTTGGCAAAATGAGTaGAGCCGCCTCCTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQRKPTPLPSATVNAQQTWQNE*SRLLPR Trigger: CCTGGGCAGGAGGCGGCTCCACTCATTTTGCCAAGT...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAAGAGGGGCAGAGGCACTaGACACAAAGATATGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VSQRKPTPLPSATVNAQQEGQRH*TQRYAA Trigger: CGCTGCATATCTTTGTGTCCAGTGCCTCTGCCCCTC...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTGGTCTTCGATGAGATaGTTGGGAGTGCCTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLWSSMR*LGVPPK Trigger: TTTTGGAGGCACTCCCAAGCATCTCATCGAAGACCA...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCTGGTCTTCGATGAGATaGTTGGGAGTGCCTCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLWSSMR*LGVPPK Trigger: TTTTGGAGGCACTCCCAAGCATCTCATCGAAGACCA...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCTTTCGGCCCCACTTaGCAAAATGAGTGGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LLVAKSPKENPPLFPLQLSFGPT*QNEWSR Trigger: GCGGCTCCACTCATTTTGCCAAGTGGGGCCGAAAGA...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR TCA 90 bp | TCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCTGGTAGATGTCATTTaGGAAAGGTTCTTCAAATCG | + |
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Preference number: 4 (lower is better) Translates to: SLCNCQRPTMPLLHFSPCLVDVI*ERFFKS Trigger: CGATTTGAAGAACCTTTCTCAAATGACATCTACCAG...ACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCGATCAGCTTGAAAAGTaGATCCGGCTTTTGACACAA | + |
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Preference number: 4 (lower is better) Translates to: RKPTPLPSATVNAQQCRCDQLEK*IRLLTQ Trigger: TTGTGTCAAAAGCCGGATGCACTTTTCAAGCTGATC...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTGATCAGCTTGAAAAGTaGATCCGGCTTTTGACACAA | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLDQLEK*IRLLTQ Trigger: TTGTGTCAAAAGCCGGATGCACTTTTCAAGCTGATC...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | TCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTAGCAAAGGAATGCATTaGTTCAGAAAATCCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLCNCQRPTMPLLHFSPCSKGMH*FRKSWS Trigger: AGACCAGGATTTTCTGAAGCAATGCATTCCTTTGCT...ACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACAATGTCAACATCTaGCTTCAGCAAAGGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLHNVNI*LQQRNA Trigger: TGCATTCCTTTGCTGAAGGCAGATGTTGACATTGTG...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCATCAAACTTCCCACTaGTTATGTCTTTCCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLHQTSH*LCLSSL Trigger: AAGGCTGGAAAGACATAACCAGTGGGAAGTTTGATG...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCATAAAAGTGGTCACCTaGCAGCTTGAGGACATCAAA | + |
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Preference number: 4 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLIKVVT*QLEDIK Trigger: TTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTAT...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTATAAAAGTGGTCACCTaGCAGCTTGAGGACATCAAA | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLIKVVT*QLEDIK Trigger: TTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTAT...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTCTGGACACAAAGATATaGAGCGGCTCCATTTTATAT | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLLDTKI*SGSILY Trigger: ATATAAAATGGAGCCGCTGCATATCTTTGTGTCCAG...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTAGCAAAGGAATGCATTaGTTCAGAAAATCCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLSKGMH*FRKSWS Trigger: AGACCAGGATTTTCTGAAGCAATGCATTCCTTTGCT...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | GGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCATCAAACTTCCCACTaGTTATGTCTTTCCAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GKVSQRKPTPLPSATVNAHQTSH*LCLSSL Trigger: AAGGCTGGAAAGACATAACCAGTGGGAAGTTTGATG...GGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | GGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCCTTCAGCAAAGGAATaGATTGCTTCAGAAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: GKVSQRKPTPLPSATVNAPSAKE*IASENP Trigger: AGGATTTTCTGAAGCAATGCATTCCTTTGCTGAAGG...GGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCAACTTGGCAAAATGAGTaGAGCCGCCTCCTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LEEQPVISLHIRNPRENSTWQNE*SRLLPR Trigger: CCTGGGCAGGAGGCGGCTCCACTCATTTTGCCAAGT...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | AGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACATGCTTCAGAAAATCCTaGTCTTCGATGAGATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLPKKTHPSSLCNCQRPTCFRKS*SSMRCL Trigger: CAAGCATCTCATCGAAGACCAGGATTTTCTGAAGCA...TGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CCA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCTTCAGAAAATCCTaGTCTTCGATGAGATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSQRKPTPLPSATVNAQQCFRKS*SSMRCL Trigger: CAAGCATCTCATCGAAGACCAGGATTTTCTGAAGCA...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR TCA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAACTGGTAGATGTCATTTaGGAAAGGTTCTTCAAATCG | + |
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Preference number: 4 (lower is better) Translates to: VSQRKPTPLPSATVNAQQLVDVI*ERFFKS Trigger: CGATTTGAAGAACCTTTCTCAAATGACATCTACCAG...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR TCA 90 bp | AGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACACTGGTAGATGTCATTTaGGAAAGGTTCTTCAAATCG | + |
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Preference number: 4 (lower is better) Translates to: SLPKKTHPSSLCNCQRPTLVDVI*ERFFKS Trigger: CGATTTGAAGAACCTTTCTCAAATGACATCTACCAG...TGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTATTTCTCCTTTAGGTaGAGTGCAGTAATAAAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SATVNAQQCRCSTSARVLYFSFR*SAVIKA Trigger: TGCTTTTATTACTGCACTGCACCTAAAGGAGAAATA...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR GCA 90 bp | AGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAAGCAAAGGAATGCATTaGTTCAGAAAATCCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPKKTHPSSLCNCQRPTSKGMH*FRKSWS Trigger: AGACCAGGATTTTCTGAAGCAATGCATTCCTTTGCT...TGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAACCTTCAGCAAAGGAATaGATTGCTTCAGAAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSQRKPTPLPSATVNAQQPSAKE*IASENP Trigger: AGGATTTTCTGAAGCAATGCATTCCTTTGCTGAAGG...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGCACAATGTCAACATCTaGCTTCAGCAAAGGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVAKSPKENPPLFPLQLHNVNI*LQQRNA Trigger: TGCATTCCTTTGCTGAAGGCAGATGTTGACATTGTG...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CCA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGATAAAAGTGGTCACCTaGCAGCTTGAGGACATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVAKSPKENPPLFPLQLIKVVT*QLEDIK Trigger: TTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTAT...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGCTGGACACAAAGATATaGAGCGGCTCCATTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVAKSPKENPPLFPLQLLDTKI*SGSILY Trigger: ATATAAAATGGAGCCGCTGCATATCTTTGTGTCCAG...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATATTTCTCCTTTAGGTaGAGTGCAGTAATAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSQRKPTPLPSATVNAQQYFSFR*SAVIKA Trigger: TGCTTTTATTACTGCACTGCACCTAAAGGAGAAATA...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | GGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACTATTTCTCCTTTAGGTaGAGTGCAGTAATAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGKVSQRKPTPLPSATVNYFSFR*SAVIKA Trigger: TGCTTTTATTACTGCACTGCACCTAAAGGAGAAATA...GTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCATGGTCTTCGATGAGATaGTTGGGAGTGCCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEEQPVISLHIRNPRENSWSSMR*LGVPPK Trigger: TTTTGGAGGCACTCCCAAGCATCTCATCGAAGACCA...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCACACAATGTCAACATCTaGCTTCAGCAAAGGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEEQPVISLHIRNPRENSHNVNI*LQQRNA Trigger: TGCATTCCTTTGCTGAAGGCAGATGTTGACATTGTG...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCACATCAAACTTCCCACTaGTTATGTCTTTCCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEEQPVISLHIRNPRENSHQTSH*LCLSSL Trigger: AAGGCTGGAAAGACATAACCAGTGGGAAGTTTGATG...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCACTGGACACAAAGATATaGAGCGGCTCCATTTTATAT | + |
|
Preference number: 4 (lower is better) Translates to: LEEQPVISLHIRNPRENSLDTKI*SGSILY Trigger: ATATAAAATGGAGCCGCTGCATATCTTTGTGTCCAG...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | GTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTCCCCAGAGTGGTCACCTGGCAGCTaGAGGACATCAAACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VNAQQCRCSTSARVLSPEWSPGS*RTSNFP Trigger: TGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCA...CTCTGGGGAAAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTGGTCACCTGGCAGCTaGAGGACATCAAACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKPTPLPSATVNAQQCRCWSPGS*RTSNFP Trigger: TGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCA...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | GTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTTCCCCAGAGCAGCAAAGGAATGCATaGCTTCAGAAAATCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNAQQCRCSTSARVLSPEQQRNA*LQKILV Trigger: GACCAGGATTTTCTGAAGCAATGCATTCCTTTGCTG...CTCTGGGGAAAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | TCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCGAGAAAGGAGAGCTTaGGAGGGTTTGTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SLCNCQRPTMPLLHFSPCRERRA*EGLSKM Trigger: CATCTTTGACAAACCCTCCAAAGCTCTCCTTTCTCG...ACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCGGAAAGCAGATCAGCTaGAAAAGTGCATCCGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLGKQIS*KSASGF Trigger: AAAGCCGGATGCACTTTTCAAGCTGATCTGCTTTCC...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTCGAGAAAGGAGAGCTTaGGAGGGTTTGTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SATVNAQQCRCSTSARVLRERRA*EGLSKM Trigger: CATCTTTGACAAACCCTCCAAAGCTCTCCTTTCTCG...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | AAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCGAGAAAGGAGAGCTTaGGAGGGTTTGTCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KTHPSSLCNCQRPTMPLLRERRA*EGLSKM Trigger: CATCTTTGACAAACCCTCCAAAGCTCTCCTTTCTCG...GAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | GGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCGGAAAGCAGATCAGCTaGAAAAGTGCATCCGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKVSQRKPTPLPSATVNAGKQIS*KSASGF Trigger: AAAGCCGGATGCACTTTTCAAGCTGATCTGCTTTCC...GGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCCAGCAAAGGAATGCATaGCTTCAGAAAATCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RKPTPLPSATVNAQQCRCQQRNA*LQKILV Trigger: GACCAGGATTTTCTGAAGCAATGCATTCCTTTGCTG...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 90 bp | TGCACTTCCAATAAGCCATTAATCTTTCGGCCCCACTTGGCAAAATaGGTGGAGCCGCCTCCTGCCCAGGGAAAGCAGATCAGCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CTSNKPLIFRPHLAK*VEPPPAQGKQISLK Trigger: TTTCAAGCTGATCTGCTTTCCCTGGGCAGGAGGCGGCTCCACTCATTTTGCCAAGTGGGGCCGAAAGATTAATGGCTTATTGGAAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAAGGAAAGCAGATCAGCTaGAAAAGTGCATCCGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSQRKPTPLPSATVNAQQGKQIS*KSASGF Trigger: AAAGCCGGATGCACTTTTCAAGCTGATCTGCTTTCC...TTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | TCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCCACTTCAGCCCGTGTCCTTAAAAATGCAAAAGCTTaGTCACGGATGATGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SATVNAQQCRCSTSARVLKNAKA*SRMMGN Trigger: GTTGCCCATCATCCGTGACAAAGCTTTTGCATTTTT...AAGGACACGGGCTGAAGTGGAGCAGCGGCATTGTTGGGCGTTGACAGTTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CAA 90 bp | GGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCAAAAATGCAAAAGCTTaGTCACGGATGATGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: GKVSQRKPTPLPSATVNAKNAKA*SRMMGN Trigger: GTTGCCCATCATCCGTGACAAAGCTTTTGCATTTTT...GGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CAA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCTTCGATGAGATGCTaGGGAGTGCCTCCAAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LLVAKSPKENPPLFPLQLSSMRC*GVPPKI Trigger: GATTTTTGGAGGCACTCCCAAGCATCTCATCGAAGA...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS-3UTR CAA 90 bp | AGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAATGCCGCTGCTCTGGTAGATGTCATTaGAGAAAGGTTCTTCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: RKPTPLPSATVNAQQCRCSGRCH*RKVLQI Trigger: GATTTGAAGAACCTTTCTCAAATGACATCTACCAGA...GCAGCGGCATTGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | AGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGTCAACGCCCAACAAAAAATGCAAAAGCTTaGTCACGGATGATGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLPKKTHPSSLCNCQRPTKNAKA*SRMMGN Trigger: GTTGCCCATCATCCGTGACAAAGCTTTTGCATTTTT...TGTTGGGCGTTGACAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | CTATTGGTGGCAAAGTCTCCCAAAGAAAACCCACCCCTCTTCCCTCTGCAACTGCAGCAAAGGAATGCATaGCTTCAGAAAATCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVAKSPKENPPLFPLQLQQRNA*LQKILV Trigger: GACCAGGATTTTCTGAAGCAATGCATTCCTTTGCTG...CAGTTGCAGAGGGAAGAGGGGTGGGTTTTCTTTGGGAGACTTTGCCACCAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS TCA 90 bp | CCTCGTTGTTCGGTTCCATCAGATAAAAGTGGTCACCTGGCAGCTTaGGGACATCAAACTTCCCACTGGTTATGTCTTTCCAGCCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PRCSVPSDKSGHLAA*GHQTSHWLCLSSLL Trigger: TAGAAGGCTGGAAAGACATAACCAGTGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTATCTGATGGAACCGAACAACGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 90 bp | CAACAGGGCAGTCACAACTTCCTCAGCTATCTGGTAGATGTCATTTaGGAAAGGTTCTTCAAATCGGGTTTCTCTCCCAGCCAGTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: QQGSHNFLSYLVDVI*ERFFKSGFSPSQSY Trigger: GTAAGACTGGCTGGGAGAGAAACCCGATTTGAAGAACCTTTCTCAAATGACATCTACCAGATAGCTGAGGAAGTTGTGACTGCCCTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCATGGTCACCTGGCAGCTaGAGGACATCAAACTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LEEQPVISLHIRNPRENSWSPGS*RTSNFP Trigger: TGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCA...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS CCA 90 bp | TCAACATCTGCCTTCAGCAAAGGAATGCATTGCTTCAGAAAATCCTaGTCTTCGATGAGATGCTTGGGAGTGCCTCCAAAAATCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: STSAFSKGMHCFRKS*SSMRCLGVPPKIRR Trigger: CCTTCTGATTTTTGGAGGCACTCCCAAGCATCTCATCGAAGACCAGGATTTTCTGAAGCAATGCATTCCTTTGCTGAAGGCAGATGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS CCA 90 bp | GATAAAGTCCTCGTTGTTCGGTTCCATCAGATAAAAGTGGTCACCTaGCAGCTTGAGGACATCAAACTTCCCACTGGTTATGTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DKVLVVRFHQIKVVT*QLEDIKLPTGYVFP Trigger: TGGAAAGACATAACCAGTGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTATCTGATGGAACCGAACAACGAGGACTTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS-3UTR CAA 90 bp | TTGGAGGAACAGCCTGTGATCAGTTTGCATATTAGAAACCCCAGAGAAAACTCATCTGGTAGATGTCATTaGAGAAAGGTTCTTCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LEEQPVISLHIRNPRENSSGRCH*RKVLQI Trigger: GATTTGAAGAACCTTTCTCAAATGACATCTACCAGA...TGAGTTTTCTCTGGGGTTTCTAATATGCAAACTGATCACAGGCTGTTCCTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 72 bp | TGGAGCCGCCTCCTGCCCAGGGAAAGCAGATCAGCTTaGAAAGTGCATCCGGCTTTTGACACAAACAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WSRLLPRESRSA*KVHPAFDTNSS Trigger: TGAACTGTTTGTGTCAAAAGCCGGATGCACTTTTCAAGCTGATCTGCTTTCCCTGGGCAGGAGGCGGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 72 bp | AATAAGCCATTAATCTTTCGGCCCCACTTGGCAAAATaGGTGGAGCCGCCTCCTGCCCAGGGAAAGCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: NKPLIFRPHLAK*VEPPPAQGKQI Trigger: GATCTGCTTTCCCTGGGCAGGAGGCGGCTCCACTCATTTTGCCAAGTGGGGCCGAAAGATTAATGGCTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS CCA 72 bp | CTTGAGGCCGGAATTCTGAGTGAGGGGCAGAGGCACTaGACACAAAGATATGCAGCGGCTCCATTTTATATT | + |
|
Preference number: 6 (lower is better) Translates to: LEAGILSEGQRH*TQRYAAAPFYI Trigger: AATATAAAATGGAGCCGCTGCATATCTTTGTGTCCAGTGCCTCTGCCCCTCACTCAGAATTCCGGCCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS CAA 90 bp | TCCTGCCCAGGGAAAGCAGATCAGCTTGAAAAGTGCATCCGGCTTTaGACACAAACAGTTCAAAACCTTCTCATTCCTGGTACTCTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCPGKADQLEKCIRL*TQTVQNLLIPGTLS Trigger: GCTAAGAGTACCAGGAATGAGAAGGTTTTGAACTGTTTGTGTCAAAAGCCGGATGCACTTTTCAAGCTGATCTGCTTTCCCTGGGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 72 bp | TCGGTTCCATCAGATAAAAGTGGTCACCTGGCAGCTTaGGGACATCAAACTTCCCACTGGTTATGTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVPSDKSGHLAA*GHQTSHWLCLS Trigger: GGAAAGACATAACCAGTGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTATCTGATGGAACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS CCA 72 bp | GCCTTCAGCAAAGGAATGCATTGCTTCAGAAAATCCTaGTCTTCGATGAGATGCTTGGGAGTGCCTCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: AFSKGMHCFRKS*SSMRCLGVPPK Trigger: TTTTGGAGGCACTCCCAAGCATCTCATCGAAGACCAGGATTTTCTGAAGCAATGCATTCCTTTGCTGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS CCA 72 bp | CTCGTTGTTCGGTTCCATCAGATAAAAGTGGTCACCTaGCAGCTTGAGGACATCAAACTTCCCACTGGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LVVRFHQIKVVT*QLEDIKLPTGY Trigger: ATAACCAGTGGGAAGTTTGATGTCCTCAAGCTGCCAGGTGACCACTTTTATCTGATGGAACCGAACAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 72 bp | CAATTTGTTAATATCAGGAACTTGAGGCCGGAATTCTaGGTGAGGGGCAGAGGCACTGGACACAAAGATATG | + |
|
Preference number: 6 (lower is better) Translates to: QFVNIRNLRPEF*VRGRGTGHKDM Trigger: CATATCTTTGTGTCCAGTGCCTCTGCCCCTCACTCAGAATTCCGGCCTCAAGTTCCTGATATTAACAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
||
| CDS TCA 72 bp | AGTCACAACTTCCTCAGCTATCTGGTAGATGTCATTTaGGAAAGGTTCTTCAAATCGGGTTTCTCTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SHNFLSYLVDVI*ERFFKSGFSPS Trigger: GCTGGGAGAGAAACCCGATTTGAAGAACCTTTCTCAAATGACATCTACCAGATAGCTGAGGAAGTTGTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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| CDS GCA 72 bp | ACAATGTCAACATCTGCCTTCAGCAAAGGAATGCATTaGTTCAGAAAATCCTGGTCTTCGATGAGATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TMSTSAFSKGMH*FRKSWSSMRCL Trigger: CAAGCATCTCATCGAAGACCAGGATTTTCTGAAGCAATGCATTCCTTTGCTGAAGGCAGATGTTGACATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027955.11 ENSMUST00000115087.4 ENSMUST00000194918.6 |
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