Pregenerated sensors for OIT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009654Ensembl transcript IDs: ENSMUST00000009798.5
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACAGACAGTTGTaGGCCACCACAACGGGGTGCCGTGAATTGAACCCGGGTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: FRSGHWIPGQSYRQL*ATTTGCRELNPGPP Trigger: TGGAGGACCCGGGTTCAATTCACGGCACCCCGTTGTGGTGGCTCACAACTGTCTGTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR CCA 90 bp | GTTTGCCTGCATGTGTGTTTATGTAGCATATGCATGTCCCGTGCCTaGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: VCLHVCLCSICMSRA*GVQKWPLDPWTELQ Trigger: CTGTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATGCATATGCTACATAAACACACATGCAGGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR CAA 90 bp | GGGAGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTaGAGTCCAGAAGCTGAGGCCCACCTAGGCACACGGGCCAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRMREVSFPEEKHKS*SPEAEAHLGTRASS Trigger: ACTGCTGGCCCGTGTGCCTAGGTGGGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR TCA 72 bp | TTACAGACAGTTGTGAGCCACCACAACGGGGTGCCGTaGATTGAACCCGGGTCCTCCACAAGAGCAGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LQTVVSHHNGVP*IEPGSSTRAAS Trigger: ACTGGCTGCTCTTGTGGAGGACCCGGGTTCAATTCACGGCACCCCGTTGTGGTGGCTCACAACTGTCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR CCA 72 bp | AGCATATGCATGTCCCGTGCCTGGGGAGTTCAGAAGTaGCCATTGGATCCCTGGACAGAGTTACAGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: SICMSRAWGVQK*PLDPWTELQTV Trigger: AACTGTCTGTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATGCATATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACCATTATTTTAGGGTTTaGACTTGGAATGACATTCCC | + |
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Preference number: 3 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYHYFRV*TWNDIP Trigger: GGGAATGTCATTCCAAGTCAAAACCCTAAAATAATG...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR TCA 72 bp | TTCCTATTGTCTTATCTAACCCAGGGCACAGAATACTaGTATTCTGGGTATATGGAGCCAAAATTTAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: FLLSYLTQGTEY*YSGYMEPKFSF Trigger: AAAACTAAATTTTGGCTCCATATACCCAGAATATCAGTATTCTGTGCCCTGGGTTAGATAAGACAATAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR TCA 72 bp | CATCCAGGCAATATGAAAACACTAAAAAGTACTATGTaGCGTTCAACCTATTGTGTTTCCTGTTACACATTA | + |
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Preference number: 3 (lower is better) Translates to: HPGNMKTLKSTM*RSTYCVSCYTL Trigger: TAATGTGTAACAGGAAACACAATAGGTTGAACGTCACATAGTACTTTTTAGTGTTTTCATATTGCCTGGATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGCTCTGGGGCAGGCCTTaGCTTCCACCGTGGCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IWTNSGTKPASQSFHGVGLWGRP*LPPWRS Trigger: GGAACGCCACGGTGGAAGTCAAGGCCTGCCCCAGAG...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACCAGGTGACACCAAGGTaGCTGTGGTGGAGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYQVTPR*LWWRGR Trigger: CCTGCCTCTCCACCACAGTCACCTTGGTGTCACCTG...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACGTCAGTGTCTGGCTCTaGAGCCCAGCAGAGTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYVSVWL*SPAESS Trigger: CGAGGACTCTGCTGGGCTGCAGAGCCAGACACTGAC...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACCTCGGCAGGAGGTGTTaGTCAGGAAGAGCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYLGRRC*SGRAPG Trigger: GCCTGGAGCTCTTCCTGACCAACACCTCCTGCCGAG...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGCTTCGGTGGCACCCTTaGGCACAGCGGGAACGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IWTNSGTKPASQSFHGVGLRWHP*AQRERS Trigger: TGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAG...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACCCACCTGTCAGTGTCTaGCTCTGCAGCCCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYPPVSV*LCSPAE Trigger: CTCTGCTGGGCTGCAGAGCCAGACACTGACAGGTGG...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | CATGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTCCCAGTCGATGGCGATaGGGCCACCTGTCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HVPCLGSSEVAIGSLDRVPSRWR*GHLSVS Trigger: AGACACTGACAGGTGGCCCCATCGCCATCGACTGGG...AACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACGACAGCAGTTTCCTTTaGAGCTGGCACAGGCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYDSSFL*SWHRPG Trigger: GCCAGGCCTGTGCCAGCTTCAAAGGAAACTGCTGTC...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | CATGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTAAGCTGGCACAGGCCTaGCGTTGCACAATGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: HVPCLGSSEVAIGSLDRVKLAQA*RCTMPS Trigger: GGATGGCATTGTGCAACGCCAGGCCTGTGCCAGCTT...AACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACCATGGAAGCAGACGCTaGGTCTGGCCAGCCGATACA | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYHGSRR*VWPADT Trigger: TGTATCGGCTGGCCAGACCCAGCGTCTGCTTCCATG...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | AGGACACAGGAAGTCGTTCTAGAGGGGAGGACGGCTGGAAGTGAAGAAGCAGGAGCCCAGCGAGGTTCCTaGAGAGCATGCACACTCGGT | + |
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Preference number: 4 (lower is better) Translates to: RTQEVVLEGRTAGSEEAGAQRGS*RACTLG Trigger: ACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGC...TCCTGCTTCTTCACTTCCAGCCGTCCTCCCCTCTAGAACGACTTCCTGTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATCTCCTGCCATCCCCGTaGAGCGATACCACTCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SAVIWTNSGTKPASQSFHLLPSP*SDTTPR Trigger: ACGGGGAGTGGTATCGCTTCACGGGGATGGCAGGAG...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACGCACAGGCCTGGCGTTaGACAATGCCATCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYAQAWR*TMPSSS Trigger: AGAAGAGGATGGCATTGTGCAACGCCAGGCCTGTGC...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGAGCAGACGCTGGGTCTaGCCAGCCGATACACGTAGT | + |
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Preference number: 4 (lower is better) Translates to: IWTNSGTKPASQSFHGVGSRRWV*PADTRS Trigger: ACTACGTGTATCGGCTGGCCAGACCCAGCGTCTGCT...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTATGGTGGAGAGGCAGGTaGGCAGCAGGGACAGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLWWRGR*AAGTEA Trigger: TGCCTCTGTCCCTGCTGCTCACCTGCCTCTCCACCA...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACGCATGGGTCCCACAGTaGTTTTCCGGTATGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYAWVPQ*FSGMQK Trigger: CTTCTGCATACCGGAAAATCACTGTGGGACCCATGC...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGAGGCATGGCATCTCCTaGCATCCCCGTGAAGCGATA | + |
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Preference number: 4 (lower is better) Translates to: IWTNSGTKPASQSFHGVGRHGIS*HPREAI Trigger: TATCGCTTCACGGGGATGGCAGGAGATGCCATGCCT...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAGCAAGTCTGCCCATCTaGGCCCAGCGAGGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLASLPI*AQRGSW Trigger: CCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGC...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR CAA 72 bp | TGCATGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATaGGATCCCTGGACAGAGTTACAGACAGTTGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CMSRAWGVQKWP*DPWTELQTVVS Trigger: GCTCACAACTGTCTGTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACGGGACTTGGCAAGTGTaGTTATCTTCAGACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYGTWQV*LSSDST Trigger: GGTGCTGTCTGAAGATAATCACACTTGCCAAGTCCC...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATTCGTCAAAGCAAGTCTaGCCATCTGGGCCCAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: SAVIWTNSGTKPASQSFHSSKQV*PSGPSE Trigger: CTCGCTGGGCCCAGATGGGCAGACTTGCTTTGACGA...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACAAGACGATGTTGACGTaGGTGCCATTGGACACTCCT | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYKTMLT*VPLDTP Trigger: AGGAGTGTCCAATGGCACCCACGTCAACATCGTCTT...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | AGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAGAGGGGAGGACGGCTCTTTGCAGTGGGCGTaGCAAAGCAGCTCTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: RFSDVSEDTGSRSRGEDGSLQWA*QSSSLP Trigger: TGGTAGAGAGCTGCTTTGCCACGCCCACTGCAAAGA...GCCGTCCTCCCCTCTAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACAAGTGCTTTGCTAGGTaGTCCCTGGATGAGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYKCFAR*SLDEYC Trigger: GCAGTACTCATCCAGGGACCACCTAGCAAAGCACTT...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGTTGAAGACGGGGGCTTaGAAGTGCTTTGCTAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IWTNSGTKPASQSFHGVGLKTGA*KCFARW Trigger: CCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAA...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAAGTCCTCCCAGTCGATaGCGATGGGGCCACCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLSPPSR*RWGHLS Trigger: TGACAGGTGGCCCCATCGCCATCGACTGGGAGGACT...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| 3UTR CAA 72 bp | AGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTaGAGTCCAGAAGCTGAGGCCCACCTAGGCACACGG | + |
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Preference number: 4 (lower is better) Translates to: REVSFPEEKHKS*SPEAEAHLGTR Trigger: CCGTGTGCCTAGGTGGGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACTATGCCAAAGTAGAGTaGGTCGCGAAGCTTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYYAKVE*VAKLEC Trigger: ACACTCAAGCTTCGCGACTCACTCTACTTTGGCATA...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATCCTGGCGTTGCACAATaGCATCCTCTTCTAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SAVIWTNSGTKPASQSFHPGVAQ*HPLLGG Trigger: ACCCCCTAGAAGAGGATGGCATTGTGCAACGCCAGG...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGACCCAAGGCAGGAATaGCTGCAGCCACCATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SAVIWTNSGTKPASQSFHDPRQE*LQPPLL Trigger: CAACAATGGTGGCTGCAGCCATTCCTGCCTTGGGTC...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | AGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAGAGGGGAGGACGGCCCACCATTGTTGTTGTaGCAACCTTCGATGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: RFSDVSEDTGSRSRGEDGPPLLL*QPSMSS Trigger: CGAAGACATCGAAGGTTGTCACAACAACAATGGTGG...GCCGTCCTCCCCTCTAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAGGTTCCTGGAGAGCATaGACACTCGGTGGTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLGSWRA*TLGGIQ Trigger: CTGGATACCACCGAGTGTGCATGCTCTCCAGGAACC...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | GAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGCTGAGGCCGCACCAGGGGCTCTATaGCAAAGTAGAGTGAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: EVSFPEEKHKSLSPEAEAAPGAL*QSRVSR Trigger: GCGACTCACTCTACTTTGGCATAGAGCCCCTGGTGC...GGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTATGGGACTCGTCGAACTaGTGGTCAGTGTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLWDSSN*WSVFLQ Trigger: CTGGAGGAACACTGACCACCAGTTCGACGAGTCCCA...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTATCCTCTTCTAGGGGGTaGCTGCCATTGAGCCAGACA | + |
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Preference number: 4 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLSSSRG*LPLSQT Trigger: TGTCTGGCTCAATGGCAGCCACCCCCTAGAAGAGGA...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CCA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATTCACTTCAATGGCGCTaGACTTGCACAACACGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SAVIWTNSGTKPASQSFHSLQWR*TCTTRG Trigger: TCCCCGTGTTGTGCAAGTCCAGCGCCATTGAAGTGA...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGTCCCTGGATGAGTACTaGTTTACTGAGTCATCGGAA | + |
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Preference number: 4 (lower is better) Translates to: IWTNSGTKPASQSFHGVGSLDEY*FTESSE Trigger: TTCCGATGACTCAGTAAAGCAGTACTCATCCAGGGA...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR TCA 90 bp | GAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGCTGAGGCCTTGTCGCAAAGAGGTTaGTTCTGGGACTCGTCGAAC | + |
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Preference number: 4 (lower is better) Translates to: EVSFPEEKHKSLSPEAEALSQRG*FWDSSN Trigger: GTTCGACGAGTCCCAGAATCAACCTCTTTGCGACAA...GGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR GCA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAACGGGGGCTTGGAAGTaGTTTGCTAGGTGGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RMREVSFPEEKHKSLSPETGAWK*FARWSL Trigger: CAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGT...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CCA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGACTCGTCGAACTGGTaGTCAGTGTTCCTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RMREVSFPEEKHKSLSPEDSSNW*SVFLQG Trigger: GCCCTGGAGGAACACTGACCACCAGTTCGACGAGTC...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CCA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACAAAAATACCTCCTTGTaGTCTTTGCCCACAAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYKNTSL*SLPTNL Trigger: CAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTT...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR GCA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAATCACGCAGATCTCGCTaGAGCCACCGTTGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RMREVSFPEEKHKSLSPESRRSR*SHRCCA Trigger: AGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGA...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGCTGAGGCCTTGCTAGGTGGTCCCTaGATGAGTACTGCTTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVSFPEEKHKSLSPEAEALLGGP*MSTALL Trigger: CAGTAAAGCAGTACTCATCCAGGGACCACCTAGCAA...GGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR TCA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAACTTTGCCCACAAACTTaGAGACGGGGGCTTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RMREVSFPEEKHKSLSPELCPQT*RRGLGS Trigger: ACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAG...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR GCA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAACAAGGCAGGAATGGCTaGAGCCACCATTGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMREVSFPEEKHKSLSPEQGRNG*SHHCCC Trigger: ACAACAACAATGGTGGCTGCAGCCATTCCTGCCTTG...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | CCCGTCGCTCCTGAGCACGCGGCCAACCCCGCATGCGCAGCGGTGTaGGTTTTTGAGGTTCACGCAGATCTCGCTGCAGCCACCGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVAPEHAANPACAAV*VFEVHADLAAATVV Trigger: AACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACACCGCTGCGCATGCGGGGTTGGCCGCGTGCTCAGGAGCGACGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | TCCTCCCAGTCGATGGCGATGGGGCCACCTGTCAGTGTCTGGCTCTaGAGCCCAGCAGAGTCCTCGTCCTCACCCACCTCACGACGTACT | + |
|
Preference number: 5 (lower is better) Translates to: SSQSMAMGPPVSVWL*SPAESSSSPTSRRT Trigger: AGTACGTCGTGAGGTGGGTGAGGACGAGGACTCTGCTGGGCTGCAGAGCCAGACACTGACAGGTGGCCCCATCGCCATCGACTGGGAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | CCAGCAGAGTCCTCGTCCTCACCCACCTCACGACGTACTCTTCGGTaGCACCCTTGGGCACAGCGGGAACGCTCATCCAGCACCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PAESSSSPTSRRTLR*HPWAQRERSSSTPH Trigger: ATGTGGGGTGCTGGATGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGAGTACGTCGTGAGGTGGGTGAGGACGAGGACTCTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | CACTGCTCCCAGGGGTCTCCTTGGGCAGGCCCGTCACGATGTTGCTaGCCACGATTTTGTCATTCACCACGTCAACCACGGTGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HCSQGSPWAGPSRCC*PRFCHSPRQPRCRR Trigger: CCTGCGGCACCGTGGTTGACGTGGTGAATGACAAAATCGTGGCCAGCAACATCGTGACGGGCCTGCCCAAGGAGACCCCTGGGAGCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | TCCTCGTCCTCACCCACCTCACGACGTACTCTTCGGTGGCACCCTTaGGCACAGCGGGAACGCTCATCCAGCACCCCACATACAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSPTSRRTLRWHP*AQRERSSSTPHTRT Trigger: CGTCCTTGTATGTGGGGTGCTGGATGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGAGTACGTCGTGAGGTGGGTGAGGACGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGGACACAGGAAGTCGTTCTAGAGGGGAGGACGGCTGGAAGTGAAGAAGCAGGACTCCCAGGGGTCTCCTaGGGCAGGCCCGTCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: RTQEVVLEGRTAGSEEAGLPGVS*GRPVTM Trigger: CATCGTGACGGGCCTGCCCAAGGAGACCCCTGGGAG...TCCTGCTTCTTCACTTCCAGCCGTCCTCCCCTCTAGAACGACTTCCTGTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | CATGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTCCTCGGCAGGAGGTGTaGGTCAGGAAGAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HVPCLGSSEVAIGSLDRVPRQEV*VRKSSR Trigger: CCTGGAGCTCTTCCTGACCAACACCTCCTGCCGAGG...AACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | CTCCAGGCCGTTCACATGCACCAGGGGCTCTATGCCAAAGTAGAGTaGGTCGCGAAGCTTGAGTGTGGGCAGAGTCTCCCGGTACGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQAVHMHQGLYAKVE*VAKLECGQSLPVRF Trigger: GAACCGTACCGGGAGACTCTGCCCACACTCAAGCTTCGCGACTCACTCTACTTTGGCATAGAGCCCCTGGTGCATGTGAACGGCCTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | AGGGGGTGGCTGCCATTGAGCCAGACAGGAGCATGGGTCCCACAGTaGTTTTCCGGTATGCAGAAGGTAGGCATGGCATCTCCTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RGWLPLSQTGAWVPQ*FSGMQKVGMASPAI Trigger: GATGGCAGGAGATGCCATGCCTACCTTCTGCATACCGGAAAATCACTGTGGGACCCATGCTCCTGTCTGGCTCAATGGCAGCCACCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | AAAGCAAGTCTGCCCATCTGGGCCCAGCGAGGTTCCTGGAGAGCATaGACACTCGGTGGTATCCAGGCAGTTGCCGTGACAATCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KASLPIWAQRGSWRA*TLGGIQAVAVTILI Trigger: GATGAGGATTGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | GTGGCGTTCCACAGACAGCAGTTTCCTTTGAAGCTGGCACAGGCCTaGCGTTGCACAATGCCATCCTCTTCTAGGGGGTGGCTGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VAFHRQQFPLKLAQA*RCTMPSSSRGWLPL Trigger: CAATGGCAGCCACCCCCTAGAAGAGGATGGCATTGTGCAACGCCAGGCCTGTGCCAGCTTCAAAGGAAACTGCTGTCTGTGGAACGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | GCCCATCTGGGCCCAGCGAGGTTCCTGGAGAGCATGCACACTCGGTaGTATCCAGGCAGTTGCCGTGACAATCCTCATCACAGATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AHLGPARFLESMHTR*YPGSCRDNPHHRCH Trigger: ATGACATCTGTGATGAGGATTGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | TCAACCACGGTGCCGCAGGTCTTGAGTGAGAAGACGATGTTGACGTaGGTGCCATTGGACACTCCTCGGCAGGAGGTGTTGGTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STTVPQVLSEKTMLT*VPLDTPRQEVLVRK Trigger: CTTCCTGACCAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCACCGTGGTTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAGAGGGGAGGACGGCTTGACGTGGGTGCCATaGGACACTCCTCGGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFSDVSEDTGSRSRGEDGLTWVP*DTPRQE Trigger: CTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAA...GCCGTCCTCCCCTCTAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATTCTTCGGTGGCACCCTaGGGCACAGCGGGAACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAVIWTNSGTKPASQSFHSSVAP*GTAGTL Trigger: GAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGA...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | CATGCACCAGGGGCTCTATGCCAAAGTAGAGTGAGTCGCGAAGCTTaGGTGTGGGCAGAGTCTCCCGGTACGGTTCCTCGAATTCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HAPGALCQSRVSREA*VWAESPGTVPRIRG Trigger: ACCACGAATTCGAGGAACCGTACCGGGAGACTCTGCCCACACTCAAGCTTCGCGACTCACTCTACTTTGGCATAGAGCCCCTGGTGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | TTCCACAGACAGCAGTTTCCTTTGAAGCTGGCACAGGCCTGGCGTTaGACAATGCCATCCTCTTCTAGGGGGTGGCTGCCATTGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHRQQFPLKLAQAWR*TMPSSSRGWLPLSQ Trigger: CTGGCTCAATGGCAGCCACCCCCTAGAAGAGGATGGCATTGTGCAACGCCAGGCCTGTGCCAGCTTCAAAGGAAACTGCTGTCTGTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 90 bp | CACAGATGTCATAGAAATGGCCACAGTAGACATGGAAGCAGACGCTaGGTCTGGCCAGCCGATACACGTAGTAGCCTCTGGGGCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRCHRNGHSRHGSRR*VWPADTRSSLWGRP Trigger: AGGCCTGCCCCAGAGGCTACTACGTGTATCGGCTGGCCAGACCCAGCGTCTGCTTCCATGTCTACTGTGGCCATTTCTATGACATCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 90 bp | ATTTTCGTCAAAGCAAGTCTGCCCATCTGGGCCCAGCGAGGTTCCTaGAGAGCATGCACACTCGGTGGTATCCAGGCAGTTGCCGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: IFVKASLPIWAQRGS*RACTLGGIQAVAVT Trigger: TGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTTGACGAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CAA 90 bp | CCAGCTGTCTTAGGAGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTACCTCTGGGGCAGGCCTaGACTTCCACCGTGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAVLGGSLMSLRTQEVVLPLGQA*TSTVAF Trigger: GAACGCCACGGTGGAAGTCAAGGCCTGCCCCAGAGG...TAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCTCCTAAGACAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CAA 90 bp | CATGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACGGTGCCGCAGGTCTaGAGTGAGAAGACGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HVPCLGSSEVAIGSLDRVTVPQV*SEKTML Trigger: CAACATCGTCTTCTCACTCAAGACCTGCGGCACCGT...AACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 90 bp | ACTCGTCGAACTGGTGGTCAGTGTTCCTCCAGGGCTCGTTCAGACTaGTGTAAGCGGAACAAGGATCTAGGACCGCAGGTGACACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRRTGGQCSSRARSD*CKRNKDLGPQVTPR Trigger: CCTTGGTGTCACCTGCGGTCCTAGATCCTTGTTCCGCTTACATCAGTCTGAACGAGCCCTGGAGGAACACTGACCACCAGTTCGACGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 90 bp | TCCTCAGACCCAAGGCAGGAATGGCTGCAGCCACCATTGTTGTTGTaGCAACCTTCGATGTCTTCGCAAGTCTTCCCGTCGCTCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSDPRQEWLQPPLLL*QPSMSSQVFPSLLS Trigger: GCTCAGGAGCGACGGGAAGACTTGCGAAGACATCGAAGGTTGTCACAACAACAATGGTGGCTGCAGCCATTCCTGCCTTGGGTCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 90 bp | CAGCCACCGTTGTTGTGCTCACATTCATTTTCGTCAAAGCAAGTCTaGCCATCTGGGCCCAGCGAGGTTCCTGGAGAGCATGCACACTCG | + |
|
Preference number: 5 (lower is better) Translates to: QPPLLCSHSFSSKQV*PSGPSEVPGEHAHS Trigger: CGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 90 bp | ACAGCCGTCCTGGATCAGGTAGTACTTGAGGATTTCATCCATCTTTaGAGTGGGCGTGGCAAAGCAGCTCTCTACCAGGCTCTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TAVLDQVVLEDFIHL*SGRGKAALYQALQA Trigger: GGCCTGGAGAGCCTGGTAGAGAGCTGCTTTGCCACGCCCACTGCAAAGATGGATGAAATCCTCAAGTACTACCTGATCCAGGACGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | ATTGCGCAGGTTGGGCACGTATCCTTCCGAGATGGTGTACAGTCGTaGGAACTCGCAGGTCACGGGGATCAACAGTTTGCTGGTCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IAQVGHVSFRDGVQS*ELAGHGDQQFAGPN Trigger: ATTCGGACCAGCAAACTGTTGATCCCCGTGACCTGCGAGTTCCCACGACTGTACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 90 bp | TTTCCAATGGGGCATTGCGCAGGTTGGGCACGTATCCTTCCGAGATaGTGTACAGTCGTGGGAACTCGCAGGTCACGGGGATCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FPMGHCAGWARILPR*CTVVGTRRSRGSTV Trigger: AACTGTTGATCCCCGTGACCTGCGAGTTCCCACGACTGTACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS-3UTR CAA 90 bp | AGGTTCTCTGATGTCTCTGAGGACACAGGAAGTCGTTCTAGAGGGGAGGACGGCAGACAGCAGTTTCCTTaGAAGCTGGCACAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RFSDVSEDTGSRSRGEDGRQQFP*KLAQAW Trigger: CCAGGCCTGTGCCAGCTTCAAAGGAAACTGCTGTCT...GCCGTCCTCCCCTCTAGAACGACTTCCTGTGTCCTCAGAGACATCAGAGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | ATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGGTGGGGAGGCCCGTCACGATGTaGCTGGCCACGATTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IWTNSGTKPASQSFHGVGRPVTM*LATILS Trigger: TGACAAAATCGTGGCCAGCAACATCGTGACGGGCCT...CCCCACCCCATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACTCTTTGCCCACAAACTaGAAGACGGGGGCTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYSLPTN*KTGAWK Trigger: CTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGA...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | GTGAAGCGATACCACTCCCCGTTCATATGGTTGTCGCAAAGAGGTTaGTTCTGGGACTCGTCGAACTGGTGGTCAGTGTTCCTCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKRYHSPFIWLSQRG*FWDSSNWWSVFLQG Trigger: GCCCTGGAGGAACACTGACCACCAGTTCGACGAGTCCCAGAATCAACCTCTTTGCGACAACCATATGAACGGGGAGTGGTATCGCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | GATTTTGTCATTCACCACGTCAACCACGGTGCCGCAGGTCTTGAGTaGGAAGACGATGTTGACGTGGGTGCCATTGGACACTCCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DFVIHHVNHGAAGLE*EDDVDVGAIGHSSA Trigger: TGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCACCGTGGTTGACGTGGTGAATGACAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | CAGTGTGAAGGGAAAGATGCCGTGGTTTCGGCTCCTGATTTCCAATaGGGCATTGCGCAGGTTGGGCACGTATCCTTCCGAGATGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QCEGKDAVVSAPDFQ*GIAQVGHVSFRDGV Trigger: TACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAATCAGGAGCCGAAACCACGGCATCTTTCCCTTCACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACTCGCTGCAGCCACCGTaGTTGTGCTCACATTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYSLQPP*LCSHSF Trigger: AAATGAATGTGAGCACAACAACGGTGGCTGCAGCGA...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGGCTTGGAAGTGCTTaGCTAGGTGGTCCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SAVIWTNSGTKPASQSFHGLGSA*LGGPWM Trigger: CATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCC...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | TGTCCCGTGCCTGGGGAGTTCAGAAGTGGCCATTGGATCCCTGGACAGAGTTACACCTCCTTGTGGTCTTaGCCCACAAACTTGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: CPVPGEFRSGHWIPGQSYTSLWS*PTNLKT Trigger: CGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGT...GTAACTCTGTCCAGGGATCCAATGGCCACTTCTGAACTCCCCAGGCACGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | CGCGGCAGTGTAAAAATACCTCCTTGTGGTCTTTGCCCACAAACTTaGAGACGGGGGCTTGGAAGTGCTTTGCTAGGTGGTCCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGSVKIPPCGLCPQT*RRGLGSALLGGPWM Trigger: CATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTTACACTGCCGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | GCGAGGTTCCTGGAGAGCATGCACACTCGGTGGTATCCAGGCAGTTaGCGTGACAATCCTCATCACAGATGTCATAGAAATGGCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: ARFLESMHTRWYPGS*RDNPHHRCHRNGHS Trigger: ACTGTGGCCATTTCTATGACATCTGTGATGAGGATTGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | GTTGTTGTGCTCACATTCATTTTCGTCAAAGCAAGTCTGCCCATCTaGGCCCAGCGAGGTTCCTGGAGAGCATGCACACTCGGTGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: VVVLTFIFVKASLPI*AQRGSWRACTLGGI Trigger: GATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | GAGTTTTTGAGGTTCACGCAGATCTCGCTGCAGCCACCGTTGTTGTaGTCACATTCATTTTCGTCAAAGCAAGTCTGCCCATCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EFLRFTQISLQPPLL*SHSFSSKQVCPSGP Trigger: GGGCCCAGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | GACATTCACACTGATAGCCCTCCTCAGACCCAAGGCAGGAATGGCTaGAGCCACCATTGTTGTTGTGACAACCTTCGATGTCTTCGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DIHTDSPPQTQGRNG*SHHCCCDNLRCLRK Trigger: CTTGCGAAGACATCGAAGGTTGTCACAACAACAATGGTGGCTGCAGCCATTCCTGCCTTGGGTCTGAGGAGGGCTATCAGTGTGAATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGTGCCGTGATTTGGACGAACTCAGGGACAAAACCAGCCAGCCAGTCCTTTCATGGATTTCATCCATCTTaGCAGTGGGCGTGGCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAVIWTNSGTKPASQSFHGFHPS*QWAWQS Trigger: GCTTTGCCACGCCCACTGCAAAGATGGATGAAATCC...ATGAAAGGACTGGCTGGCTGGTTTTGTCCCTGAGTTCGTCCAAATCACGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 90 bp | TCCTTGTGGTCTTTGCCCACAAACTTGAAGACGGGGGCTTGGAAGTaGTTTGCTAGGTGGTCCCTGGATGAGTACTGCTTTACTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLWSLPTNLKTGAWK*FARWSLDEYCFTES Trigger: TGACTCAGTAAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | TTGCCCACAAACTTGAAGACGGGGGCTTGGAAGTGCTTTGCTAGGTaGTCCCTGGATGAGTACTGCTTTACTGAGTCATCGGAAACACAG | + |
|
Preference number: 5 (lower is better) Translates to: LPTNLKTGAWKCFAR*SLDEYCFTESSETQ Trigger: CTGTGTTTCCGATGACTCAGTAAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | GAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGCTGAGGCCCAGCGGTGTGAGTTTTaGAGGTTCACGCAGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EVSFPEEKHKSLSPEAEAQRCEF*RFTQIS Trigger: CGAGATCTGCGTGAACCTCAAAAACTCACACCGCTG...GGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 90 bp | TTACTGAGTCATCGGAAACACAGCCGTCCTGGATCAGGTAGTACTTaGGGATTTCATCCATCTTTGCAGTGGGCGTGGCAAAGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSHRKHSRPGSGST*GFHPSLQWAWQSSS Trigger: AGAGCTGCTTTGCCACGCCCACTGCAAAGATGGATGAAATCCTCAAGTACTACCTGATCCAGGACGGCTGTGTTTCCGATGACTCAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 90 bp | AATACCTCCTTGTGGTCTTTGCCCACAAACTTGAAGACGGGGGCTTaGAAGTGCTTTGCTAGGTGGTCCCTGGATGAGTACTGCTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: NTSLWSLPTNLKTGA*KCFARWSLDEYCFT Trigger: AGTAAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | GAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGCTGAGGCCCTGCAGCCACCGTTGTaGTGCTCACATTCATTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: EVSFPEEKHKSLSPEAEALQPPL*CSHSFS Trigger: CGAAAATGAATGTGAGCACAACAACGGTGGCTGCAG...GGCCTCAGCTTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAAGTGAGAAGACGATGTaGACGTGGGTGCCATTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RMREVSFPEEKHKSLSPESEKTM*TWVPLD Trigger: GTCCAATGGCACCCACGTCAACATCGTCTTCTCACT...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAAGTTGTCGCAAAGAGGTaGATTCTGGGACTCGTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RMREVSFPEEKHKSLSPEVVAKR*ILGLVE Trigger: TTCGACGAGTCCCAGAATCAACCTCTTTGCGACAAC...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAATTGCTGGCCACGATTTaGTCATTCACCACGTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: RMREVSFPEEKHKSLSPELLATI*SFTTST Trigger: GGTTGACGTGGTGAATGACAAAATCGTGGCCAGCAA...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAATCGAATTCGTGGTCCTaGAAAATCTCCAGTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RMREVSFPEEKHKSLSPESNSWS*KISSVK Trigger: CTTCACACTGGAGATTTTCAAGGACCACGAATTCGA...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGGGAGGTGTCCTTCCCTGAGGAAAAACACAAATCTTTGAGTCCAGAATGTAAAAATACCTCCTaGTGGTCTTTGCCCACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RMREVSFPEEKHKSLSPECKNTS*WSLPTN Trigger: GTTTGTGGGCAAAGACCACAAGGAGGTATTTTTACA...TTCTGGACTCAAAGATTTGTGTTTTTCCTCAGGGAAGGACACCTCCCTCATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 72 bp | CCTGAGCACGCGGCCAACCCCGCATGCGCAGCGGTGTaGGTTTTTGAGGTTCACGCAGATCTCGCTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PEHAANPACAAV*VFEVHADLAAA Trigger: GGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACACCGCTGCGCATGCGGGGTTGGCCGCGTGCTCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 72 bp | AACCTTCGATGTCTTCGCAAGTCTTCCCGTCGCTCCTaGGCACGCGGCCAACCCCGCATGCGCAGCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NLRCLRKSSRRS*ARGQPRMRSGV Trigger: CACACCGCTGCGCATGCGGGGTTGGCCGCGTGCTCAGGAGCGACGGGAAGACTTGCGAAGACATCGAAGGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | CGTGGGTGCCATTGGACACTCCTCGGCAGGAGGTGTTaGTCAGGAAGAGCTCCAGGCCTCCAACCAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGCHWTLLGRRC*SGRAPGLQPAP Trigger: GGGAGCTGGTTGGAGGCCTGGAGCTCTTCCTGACCAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | TCCTCGTCCTCACCCACCTCACGACGTACTCTTCGGTaGCACCCTTGGGCACAGCGGGAACGCTCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSPTSRRTLR*HPWAQRERSSS Trigger: GCTGGATGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGAGTACGTCGTGAGGTGGGTGAGGACGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 72 bp | CTCACCCACCTCACGACGTACTCTTCGGTGGCACCCTaGGGCACAGCGGGAACGCTCATCCAGCACCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LTHLTTYSSVAP*GTAGTLIQHPT Trigger: TGTGGGGTGCTGGATGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGAGTACGTCGTGAGGTGGGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | ACGATGTTGACGTGGGTGCCATTGGACACTCCTCGGCAGGAGGTGTaGGTCAGGAAGAGCTCCAGGCCTCCAACCAGCTCCCGGGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: TMLTWVPLDTPRQEV*VRKSSRPPTSSRGT Trigger: TGTCCCCCGGGAGCTGGTTGGAGGCCTGGAGCTCTTCCTGACCAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | GTCCTCGTCCTCACCCACCTCACGACGTACTCTTCGGTGGCACCCTaGGGCACAGCGGGAACGCTCATCCAGCACCCCACATACAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLVLTHLTTYSSVAP*GTAGTLIQHPTYKD Trigger: GTCCTTGTATGTGGGGTGCTGGATGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGAGTACGTCGTGAGGTGGGTGAGGACGAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 72 bp | CGCGGCCAACCCCGCATGCGCAGCGGTGTGAGTTTTTaGGGTTCACGCAGATCTCGCTGCAGCCACCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGQPRMRSGVSF*GSRRSRCSHRC Trigger: ACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACACCGCTGCGCATGCGGGGTTGGCCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 72 bp | CTGCCCATCTGGGCCCAGCGAGGTTCCTGGAGAGCATaGACACTCGGTGGTATCCAGGCAGTTGCCGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: LPIWAQRGSWRA*TLGGIQAVAVT Trigger: TGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | GGCCTCCAACCAGCTCCCGGGGGACACTCACTTCAATaGCGCTGGACTTGCACAACACGGGGACTTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GLQPAPGGHSLQ*RWTCTTRGLGK Trigger: CTTGCCAAGTCCCCGTGTTGTGCAAGTCCAGCGCCATTGAAGTGAGTGTCCCCCGGGAGCTGGTTGGAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | TCACCCACCTCACGACGTACTCTTCGGTGGCACCCTTaGGCACAGCGGGAACGCTCATCCAGCACCCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SPTSRRTLRWHP*AQRERSSSTPH Trigger: ATGTGGGGTGCTGGATGAGCGTTCCCGCTGTGCCCAAGGGTGCCACCGAAGAGTACGTCGTGAGGTGGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 72 bp | ACGCGGCCAACCCCGCATGCGCAGCGGTGTGAGTTTTaGAGGTTCACGCAGATCTCGCTGCAGCCACCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TRPTPHAQRCEF*RFTQISLQPPL Trigger: CAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACACCGCTGCGCATGCGGGGTTGGCCGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | CTCCTGAGCACGCGGCCAACCCCGCATGCGCAGCGGTGTGAGTTTTaGAGGTTCACGCAGATCTCGCTGCAGCCACCGTTGTTGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLSTRPTPHAQRCEF*RFTQISLQPPLLCS Trigger: TGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACACCGCTGCGCATGCGGGGTTGGCCGCGTGCTCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | GGGCATTGCGCAGGTTGGGCACGTATCCTTCCGAGATaGTGTACAGTCGTGGGAACTCGCAGGTCACGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GHCAGWARILPR*CTVVGTRRSRG Trigger: TCCCCGTGACCTGCGAGTTCCCACGACTGTACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | GGGGTCTCCTTGGGCAGGCCCGTCACGATGTTGCTGGCCACGATTTaGTCATTCACCACGTCAACCACGGTGCCGCAGGTCTTGAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVSLGRPVTMLLATI*SFTTSTTVPQVLSE Trigger: CTCACTCAAGACCTGCGGCACCGTGGTTGACGTGGTGAATGACAAAATCGTGGCCAGCAACATCGTGACGGGCCTGCCCAAGGAGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | AATGGCCACAGTAGACATGGAAGCAGACGCTGGGTCTaGCCAGCCGATACACGTAGTAGCCTCTGGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: NGHSRHGSRRWV*PADTRSSLWGR Trigger: CCTGCCCCAGAGGCTACTACGTGTATCGGCTGGCCAGACCCAGCGTCTGCTTCCATGTCTACTGTGGCCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | GGCCCAGCGAGGTTCCTGGAGAGCATGCACACTCGGTaGTATCCAGGCAGTTGCCGTGACAATCCTCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: GPARFLESMHTR*YPGSCRDNPHH Trigger: GTGATGAGGATTGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | CAGGGGTCTCCTTGGGCAGGCCCGTCACGATGTTGCTaGCCACGATTTTGTCATTCACCACGTCAACCACGG | + |
|
Preference number: 6 (lower is better) Translates to: QGSPWAGPSRCC*PRFCHSPRQPR Trigger: CCGTGGTTGACGTGGTGAATGACAAAATCGTGGCCAGCAACATCGTGACGGGCCTGCCCAAGGAGACCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 72 bp | ACCACGGTGCCGCAGGTCTTGAGTGAGAAGACGATGTaGACGTGGGTGCCATTGGACACTCCTCGGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTVPQVLSEKTM*TWVPLDTPRQE Trigger: CTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCACCGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 72 bp | TTGGGCAGGCCCGTCACGATGTTGCTGGCCACGATTTaGTCATTCACCACGTCAACCACGGTGCCGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGRPVTMLLATI*SFTTSTTVPQV Trigger: GACCTGCGGCACCGTGGTTGACGTGGTGAATGACAAAATCGTGGCCAGCAACATCGTGACGGGCCTGCCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | GTGCCGCAGGTCTTGAGTGAGAAGACGATGTTGACGTGGGTGCCATaGGACACTCCTCGGCAGGAGGTGTTGGTCAGGAAGAGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VPQVLSEKTMLTWVP*DTPRQEVLVRKSSR Trigger: CCTGGAGCTCTTCCTGACCAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | ACCACGTCAACCACGGTGCCGCAGGTCTTGAGTGAGAAGACGATGTaGACGTGGGTGCCATTGGACACTCCTCGGCAGGAGGTGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TTSTTVPQVLSEKTM*TWVPLDTPRQEVLV Trigger: GACCAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCACCGTGGTTGACGTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 72 bp | GGGGCTCTATGCCAAAGTAGAGTGAGTCGCGAAGCTTaGGTGTGGGCAGAGTCTCCCGGTACGGTTCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: GALCQSRVSREA*VWAESPGTVPR Trigger: TCGAGGAACCGTACCGGGAGACTCTGCCCACACTCAAGCTTCGCGACTCACTCTACTTTGGCATAGAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 72 bp | TCCCAGGGGTCTCCTTGGGCAGGCCCGTCACGATGTTaGTGGCCACGATTTTGTCATTCACCACGTCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SQGSPWAGPSRC*WPRFCHSPRQP Trigger: TGGTTGACGTGGTGAATGACAAAATCGTGGCCAGCAACATCGTGACGGGCCTGCCCAAGGAGACCCCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | AAAGCAAGTCTGCCCATCTGGGCCCAGCGAGGTTCCTaGAGAGCATGCACACTCGGTGGTATCCAGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KASLPIWAQRGS*RACTLGGIQAV Trigger: AACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | CAACCAGCTCCCGGGGGACACTCACTTCAATGGCGCTaGACTTGCACAACACGGGGACTTGGCAAGTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QPAPGGHSLQWR*TCTTRGLGKCD Trigger: ATCACACTTGCCAAGTCCCCGTGTTGTGCAAGTCCAGCGCCATTGAAGTGAGTGTCCCCCGGGAGCTGGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | GTGCCGCAGGTCTTGAGTGAGAAGACGATGTTGACGTaGGTGCCATTGGACACTCCTCGGCAGGAGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VPQVLSEKTMLT*VPLDTPRQEVL Trigger: CAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | CAGGCCTTGACTTCCACCGTGGCGTTCCACAGACAGCAGTTTCCTTaGAAGCTGGCACAGGCCTGGCGTTGCACAATGCCATCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QALTSTVAFHRQQFP*KLAQAWRCTMPSSS Trigger: AGAAGAGGATGGCATTGTGCAACGCCAGGCCTGTGCCAGCTTCAAAGGAAACTGCTGTCTGTGGAACGCCACGGTGGAAGTCAAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 90 bp | ATGCCGTGGTTTCGGCTCCTGATTTCCAATGGGGCATTGCGCAGGTaGGGCACGTATCCTTCCGAGATGGTGTACAGTCGTGGGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: MPWFRLLISNGALRR*GTYPSEMVYSRGNS Trigger: CGAGTTCCCACGACTGTACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAATCAGGAGCCGAAACCACGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 72 bp | GTTCACATGCACCAGGGGCTCTATGCCAAAGTAGAGTaGGTCGCGAAGCTTGAGTGTGGGCAGAGTCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VHMHQGLYAKVE*VAKLECGQSLP Trigger: CGGGAGACTCTGCCCACACTCAAGCTTCGCGACTCACTCTACTTTGGCATAGAGCCCCTGGTGCATGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | GGGAAAGATGCCGTGGTTTCGGCTCCTGATTTCCAATaGGGCATTGCGCAGGTTGGGCACGTATCCTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GKDAVVSAPDFQ*GIAQVGHVSFR Trigger: TCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAATCAGGAGCCGAAACCACGGCATCTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 72 bp | AGTCGTGGGAACTCGCAGGTCACGGGGATCAACAGTTaGCTGGTCCGAATGATGATGTCCCCACTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRGNSQVTGINS*LVRMMMSPLLP Trigger: TGGGAGCAGTGGGGACATCATCATTCGGACCAGCAAACTGTTGATCCCCGTGACCTGCGAGTTCCCACGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CAA 72 bp | ATGCCGTGGTTTCGGCTCCTGATTTCCAATGGGGCATaGCGCAGGTTGGGCACGTATCCTTCCGAGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MPWFRLLISNGA*RRLGTYPSEMV Trigger: CACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAATCAGGAGCCGAAACCACGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS TCA 72 bp | ACTGGTGGTCAGTGTTCCTCCAGGGCTCGTTCAGACTaGTGTAAGCGGAACAAGGATCTAGGACCGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGGQCSSRARSD*CKRNKDLGPQV Trigger: CACCTGCGGTCCTAGATCCTTGTTCCGCTTACATCAGTCTGAACGAGCCCTGGAGGAACACTGACCACCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS GCA 72 bp | GCTCCCGGGGGACACTCACTTCAATGGCGCTGGACTTaGACAACACGGGGACTTGGCAAGTGTGATTATCTT | + |
|
Preference number: 6 (lower is better) Translates to: APGGHSLQWRWT*TTRGLGKCDYL Trigger: AAGATAATCACACTTGCCAAGTCCCCGTGTTGTGCAAGTCCAGCGCCATTGAAGTGAGTGTCCCCCGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
||
| CDS CCA 72 bp | CATAGAAATGGCCACAGTAGACATGGAAGCAGACGCTaGGTCTGGCCAGCCGATACACGTAGTAGCCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HRNGHSRHGSRR*VWPADTRSSLW Trigger: CCAGAGGCTACTACGTGTATCGGCTGGCCAGACCCAGCGTCTGCTTCCATGTCTACTGTGGCCATTTCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | GTCTTGAGTGAGAAGACGATGTTGACGTGGGTGCCATaGGACACTCCTCGGCAGGAGGTGTTGGTCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VLSEKTMLTWVP*DTPRQEVLVRK Trigger: CTTCCTGACCAACACCTCCTGCCGAGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | CGTGAAGCGATACCACTCCCCGTTCATATGGTTGTCGCAAAGAGGTaGATTCTGGGACTCGTCGAACTGGTGGTCAGTGTTCCTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: REAIPLPVHMVVAKR*ILGLVELVVSVPPG Trigger: CCCTGGAGGAACACTGACCACCAGTTCGACGAGTCCCAGAATCAACCTCTTTGCGACAACCATATGAACGGGGAGTGGTATCGCTTCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | GCCACGATTTTGTCATTCACCACGTCAACCACGGTGCCGCAGGTCTaGAGTGAGAAGACGATGTTGACGTGGGTGCCATTGGACACTCCT | + |
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Preference number: 6 (lower is better) Translates to: ATILSFTTSTTVPQV*SEKTMLTWVPLDTP Trigger: AGGAGTGTCCAATGGCACCCACGTCAACATCGTCTTCTCACTCAAGACCTGCGGCACCGTGGTTGACGTGGTGAATGACAAAATCGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | AAGGGAAAGATGCCGTGGTTTCGGCTCCTGATTTCCAATGGGGCATaGCGCAGGTTGGGCACGTATCCTTCCGAGATGGTGTACAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: KGKMPWFRLLISNGA*RRLGTYPSEMVYSR Trigger: ACGACTGTACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAATCAGGAGCCGAAACCACGGCATCTTTCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | AGTGTGGGCAGAGTCTCCCGGTACGGTTCCTCGAATTCGTGGTCCTaGAAAATCTCCAGTGTGAAGGGAAAGATGCCGTGGTTTCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SVGRVSRYGSSNSWS*KISSVKGKMPWFRL Trigger: GAGCCGAAACCACGGCATCTTTCCCTTCACACTGGAGATTTTCAAGGACCACGAATTCGAGGAACCGTACCGGGAGACTCTGCCCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 72 bp | CTGCCATTGAGCCAGACAGGAGCATGGGTCCCACAGTaGTTTTCCGGTATGCAGAAGGTAGGCATGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: LPLSQTGAWVPQ*FSGMQKVGMAS Trigger: AGATGCCATGCCTACCTTCTGCATACCGGAAAATCACTGTGGGACCCATGCTCCTGTCTGGCTCAATGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 72 bp | CCAAGGCAGGAATGGCTGCAGCCACCATTGTTGTTGTaGCAACCTTCGATGTCTTCGCAAGTCTTCCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: PRQEWLQPPLLL*QPSMSSQVFPS Trigger: CGACGGGAAGACTTGCGAAGACATCGAAGGTTGTCACAACAACAATGGTGGCTGCAGCCATTCCTGCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | CTCACATTCATTTTCGTCAAAGCAAGTCTGCCCATCTaGGCCCAGCGAGGTTCCTGGAGAGCATGCACACTC | + |
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Preference number: 6 (lower is better) Translates to: LTFIFVKASLPI*AQRGSWRACTL Trigger: GAGTGTGCATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | TTTCGGCTCCTGATTTCCAATGGGGCATTGCGCAGGTaGGGCACGTATCCTTCCGAGATGGTGTACAGTCGT | + |
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Preference number: 6 (lower is better) Translates to: FRLLISNGALRR*GTYPSEMVYSR Trigger: ACGACTGTACACCATCTCGGAAGGATACGTGCCCAACCTGCGCAATGCCCCATTGGAAATCAGGAGCCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | ACTGATAGCCCTCCTCAGACCCAAGGCAGGAATGGCTaGAGCCACCATTGTTGTTGTGACAACCTTCGATGT | + |
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Preference number: 6 (lower is better) Translates to: TDSPPQTQGRNG*SHHCCCDNLRC Trigger: ACATCGAAGGTTGTCACAACAACAATGGTGGCTGCAGCCATTCCTGCCTTGGGTCTGAGGAGGGCTATCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | TGGAAGTGCTTTGCTAGGTGGTCCCTGGATGAGTACTaGTTTACTGAGTCATCGGAAACACAGCCGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WKCFARWSLDEY*FTESSETQPSW Trigger: CCAGGACGGCTGTGTTTCCGATGACTCAGTAAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | GTGGGCAGAGTCTCCCGGTACGGTTCCTCGAATTCGTaGTCCTTGAAAATCTCCAGTGTGAAGGGAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: VGRVSRYGSSNS*SLKISSVKGKM Trigger: CATCTTTCCCTTCACACTGGAGATTTTCAAGGACCACGAATTCGAGGAACCGTACCGGGAGACTCTGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | AGACGGGGGCTTGGAAGTGCTTTGCTAGGTGGTCCCTaGATGAGTACTGCTTTACTGAGTCATCGGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: RRGLGSALLGGP*MSTALLSHRKH Trigger: GTGTTTCCGATGACTCAGTAAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | TTGTGGTCTTTGCCCACAAACTTGAAGACGGGGGCTTaGAAGTGCTTTGCTAGGTGGTCCCTGGATGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: LWSLPTNLKTGA*KCFARWSLDEY Trigger: GTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | AGAGTCTCCCGGTACGGTTCCTCGAATTCGTGGTCCTaGAAAATCTCCAGTGTGAAGGGAAAGATGCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RVSRYGSSNSWS*KISSVKGKMPW Trigger: CCACGGCATCTTTCCCTTCACACTGGAGATTTTCAAGGACCACGAATTCGAGGAACCGTACCGGGAGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | AGGACGCGGCAGTGTAAAAATACCTCCTTGTGGTCTTaGCCCACAAACTTGAAGACGGGGGCTTGGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: RTRQCKNTSLWS*PTNLKTGAWKC Trigger: GCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTTACACTGCCGCGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | CCACATACAAGGACGCGGCAGTGTAAAAATACCTCCTTGTGGTCTTaGCCCACAAACTTGAAGACGGGGGCTTGGAAGTGCTTTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: PHTRTRQCKNTSLWS*PTNLKTGAWKCFAR Trigger: CCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTTACACTGCCGCGTCCTTGTATGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 72 bp | TACCACTCCCCGTTCATATGGTTGTCGCAAAGAGGTTaGTTCTGGGACTCGTCGAACTGGTGGTCAGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: YHSPFIWLSQRG*FWDSSNWWSVF Trigger: GAACACTGACCACCAGTTCGACGAGTCCCAGAATCAACCTCTTTGCGACAACCATATGAACGGGGAGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 72 bp | CATCGGAAACACAGCCGTCCTGGATCAGGTAGTACTTaGGGATTTCATCCATCTTTGCAGTGGGCGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: HRKHSRPGSGST*GFHPSLQWAWQ Trigger: TTGCCACGCCCACTGCAAAGATGGATGAAATCCTCAAGTACTACCTGATCCAGGACGGCTGTGTTTCCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | TTGTTGTGCTCACATTCATTTTCGTCAAAGCAAGTCTaGCCATCTGGGCCCAGCGAGGTTCCTGGAGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LLCSHSFSSKQV*PSGPSEVPGEH Trigger: ATGCTCTCCAGGAACCTCGCTGGGCCCAGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | AGGTTCACGCAGATCTCGCTGCAGCCACCGTTGTTGTaGTCACATTCATTTTCGTCAAAGCAAGTCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RFTQISLQPPLL*SHSFSSKQVCP Trigger: TGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | CTGGATCAGGTAGTACTTGAGGATTTCATCCATCTTTaGAGTGGGCGTGGCAAAGCAGCTCTCTACCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LDQVVLEDFIHL*SGRGKAALYQA Trigger: AGCCTGGTAGAGAGCTGCTTTGCCACGCCCACTGCAAAGATGGATGAAATCCTCAAGTACTACCTGATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | TCTTTGCCCACAAACTTGAAGACGGGGGCTTGGAAGTaGTTTGCTAGGTGGTCCCTGGATGAGTACTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SLPTNLKTGAWK*FARWSLDEYCF Trigger: AAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | AACTTGAAGACGGGGGCTTGGAAGTGCTTTGCTAGGTaGTCCCTGGATGAGTACTGCTTTACTGAGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: NLKTGAWKCFAR*SLDEYCFTESS Trigger: CGATGACTCAGTAAAGCAGTACTCATCCAGGGACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CCA 72 bp | CATACAAGGACGCGGCAGTGTAAAAATACCTCCTTGTaGTCTTTGCCCACAAACTTGAAGACGGGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HTRTRQCKNTSL*SLPTNLKTGAW Trigger: CCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTTACACTGCCGCGTCCTTGTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | CCACATACAAGGACGCGGCAGTGTAAAAATACCTCCTaGTGGTCTTTGCCCACAAACTTGAAGACGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PHTRTRQCKNTS*WSLPTNLKTGA Trigger: AGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTTACACTGCCGCGTCCTTGTATGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | TGTGAGTTTTTGAGGTTCACGCAGATCTCGCTGCAGCCACCGTTGTaGTGCTCACATTCATTTTCGTCAAAGCAAGTCTGCCCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: CEFLRFTQISLQPPL*CSHSFSSKQVCPSG Trigger: CCCAGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 90 bp | CGGTGTGAGTTTTTGAGGTTCACGCAGATCTCGCTGCAGCCACCGTaGTTGTGCTCACATTCATTTTCGTCAAAGCAAGTCTGCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: RCEFLRFTQISLQPP*LCSHSFSSKQVCPS Trigger: AGATGGGCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAACTCACACCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS GCA 72 bp | CTGGAGAGCATGCACACTCGGTGGTATCCAGGCAGTTaGCGTGACAATCCTCATCACAGATGTCATAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LESMHTRWYPGS*RDNPHHRCHRN Trigger: ATTTCTATGACATCTGTGATGAGGATTGTCACGGCAACTGCCTGGATACCACCGAGTGTGCATGCTCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | ATACCACTCCCCGTTCATATGGTTGTCGCAAAGAGGTaGATTCTGGGACTCGTCGAACTGGTGGTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: IPLPVHMVVAKR*ILGLVELVVSV Trigger: AACACTGACCACCAGTTCGACGAGTCCCAGAATCAACCTCTTTGCGACAACCATATGAACGGGGAGTGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | TTGAGGTTCACGCAGATCTCGCTGCAGCCACCGTTGTaGTGCTCACATTCATTTTCGTCAAAGCAAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRFTQISLQPPL*CSHSFSSKQVC Trigger: GCAGACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS TCA 72 bp | GTAAAAATACCTCCTTGTGGTCTTTGCCCACAAACTTaGAGACGGGGGCTTGGAAGTGCTTTGCTAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: VKIPPCGLCPQT*RRGLGSALLGG Trigger: ACCACCTAGCAAAGCACTTCCAAGCCCCCGTCTTCAAGTTTGTGGGCAAAGACCACAAGGAGGTATTTTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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| CDS CAA 72 bp | TTTTTGAGGTTCACGCAGATCTCGCTGCAGCCACCGTaGTTGTGCTCACATTCATTTTCGTCAAAGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLRFTQISLQPP*LCSHSFSSKQV Trigger: GACTTGCTTTGACGAAAATGAATGTGAGCACAACAACGGTGGCTGCAGCGAGATCTGCGTGAACCTCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009798.5 |
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