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Pregenerated sensors for OIP5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000072980

Ensembl transcript IDs: ENSMUST00000123818.2

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CTAGCAGAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCACAAGAGTCACGACGTaGCTGGGTCTCCAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LAEKQRHVDLCKFKATLVTRVTT*LGLQEA
Trigger: CGCTTCTTGGAGACCCAGTCACGTCGTGACTCTTGT...GACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTCTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR GCA 90 bp AAGTTCCAGGACGGCCAAAGCTATATAGAAAGACCCTATCTCAAAACAAAGGAAAGGTCCCAGGCGAGGTaGAGGGTGTCGCCGAGCACC +
Preference number: 4 (lower is better)
Translates to: KFQDGQSYIERPYLKTKERSQAR*RVSPST
Trigger: GGTGCTCGGCGACACCCTGCACCTCGCCTGGGACCT...TTCCTTTGTTTTGAGATAGGGTCTTTCTATATAGCTTTGGCCGTCCTGGAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CCA 90 bp GAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCTATATAGAGTCACGACGTGACTaGGTCTCCAAGAAGCGAAGA +
Preference number: 4 (lower is better)
Translates to: EKQRHVDLCKFKATLVYIESRRD*VSKKRR
Trigger: TCTTCGCTTCTTGGAGACCCAGTCACGTCGTGACTC...TATATAGACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR TCA 90 bp CTAGCAGAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCTGTATGTGCTGGACTTaGGAAAACCTTCTATGCCAA +
Preference number: 4 (lower is better)
Translates to: LAEKQRHVDLCKFKATLVCMCWT*ENLLCQ
Trigger: TTGGCATAGAAGGTTTTCTCAAGTCCAGCACATACA...GACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTCTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CCA 90 bp CTAGCAGAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCTGGGTAGAATATAAATaGAAACCAACAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LAEKQRHVDLCKFKATLVWVEYK*KPTGVP
Trigger: TGGGACTCCTGTTGGTTTCCATTTATATTCTACCCA...GACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTCTGCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR TCA 90 bp AAGTTCCAGGACGGCCAAAGCTATATAGAAAGACCCTATCTCAAAACAAAGGAAAAACGACGTTGTTTGTaGCTTTGGAGAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KFQDGQSYIERPYLKTKEKRRCL*LWRRPG
Trigger: CCCTGGCCTTCTCCAAAGTCACAAACAACGTCGTTT...TTCCTTTGTTTTGAGATAGGGTCTTTCTATATAGCTTTGGCCGTCCTGGAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR GCA 90 bp CTAGCAGAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCGATGTGTTGTTTCCTTaGTTGTTGGTTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LAEKQRHVDLCKFKATLVDVLFP*LLVFLL
Trigger: AAGCAAGAAAACCAACAAGCAAGGAAACAACACATC...GACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTCTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CCA 90 bp GTTCCAGGACGGCCAAAGCTATATAGAAAGACCCTATCTCAAAACAAAGGAACAGCAGCCATAGCAGCATaGGTAGAATATAAATGGAAA +
Preference number: 4 (lower is better)
Translates to: VPGRPKLYRKTLSQNKGTAAIAA*VEYKWK
Trigger: TTTCCATTTATATTCTACCCATGCTGCTATGGCTGC...TGTTCCTTTGTTTTGAGATAGGGTCTTTCTATATAGCTTTGGCCGTCCTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR GCA 90 bp AAGTTTAAGGCTACCCTGGTCTATATAGAAAGTTCCAGGACGGCCAAAGCTATAGAGTTTAGACGAGTATaGATTAGCATTATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KFKATLVYIESSRTAKAIEFRRV*ISIIFS
Trigger: AGAGAAGATAATGCTAATGCATACTCGTCTAAACTC...TATAGCTTTGGCCGTCCTGGAACTTTCTATATAGACCAGGGTAGCCTTAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS TCA 90 bp ACCTTAGACTCGGAGGACCCGAGAGGGGAGAACCCTTCCACCACCTaGGTGTCCCACTCCATGGAGGAGGTAAGAGAAAAAGGTGTATCA +
Preference number: 5 (lower is better)
Translates to: TLDSEDPRGENPSTT*VSHSMEEVREKGVS
Trigger: TGATACACCTTTTTCTCTTACCTCCTCCATGGAGTGGGACACTCAGGTGGTGGAAGGGTTCTCCCCTCTCGGGTCCTCCGAGTCTAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CAA 90 bp GAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCTATATAACGTTGTTTGTGACTTaGGAGAAGGCCAGGGCGCCG +
Preference number: 5 (lower is better)
Translates to: EKQRHVDLCKFKATLVYITLFVT*EKARAP
Trigger: CGGCGCCCTGGCCTTCTCCAAAGTCACAAACAACGT...TATATAGACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS GCA 90 bp GGAGACTTTCCCTTCAGAAGCCCCGTCAGTGAGTTTAGACGAGTATaGATTAGCATTATCTTCTCTTTCAGCTCTGCAATCTTTTCTGGT +
Preference number: 5 (lower is better)
Translates to: GDFPFRSPVSEFRRV*ISIIFSFSSAIFSG
Trigger: ACCAGAAAAGATTGCAGAGCTGAAAGAGAAGATAATGCTAATGCATACTCGTCTAAACTCACTGACGGGGCTTCTGAAGGGAAAGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CAA 90 bp GAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCTATATATGCTTGTTGGTTTTCTaGCTTAAACTGATGAGGAGA +
Preference number: 5 (lower is better)
Translates to: EKQRHVDLCKFKATLVYICLLVF*LKLMRR
Trigger: TCTCCTCATCAGTTTAAGCAAGAAAACCAACAAGCA...TATATAGACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CAA 90 bp GAGAAGCAGAGGCATGTGGATCTCTGTAAGTTTAAGGCTACCCTGGTCTATATAAGATGTGTTGTTTCCTaGCTTGTTGGTTTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: EKQRHVDLCKFKATLVYIRCVVS*LVGFLA
Trigger: AGCAAGAAAACCAACAAGCAAGGAAACAACACATCT...TATATAGACCAGGGTAGCCTTAAACTTACAGAGATCCACATGCCTCTGCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS-3UTR CAA 90 bp AAGTTTAAGGCTACCCTGGTCTATATAGAAAGTTCCAGGACGGCCAAAGCTATATCTAACAAAACGACGTaGTTTGTGACTTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KFKATLVYIESSRTAKAISNKTT*FVTLEK
Trigger: CTTCTCCAAAGTCACAAACAACGTCGTTTTGTTAGA...TATAGCTTTGGCCGTCCTGGAACTTTCTATATAGACCAGGGTAGCCTTAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS TCA 72 bp CGGCTCCAACCACGCAGGCAGCCGCAGGTCGACAGGTaGCGCCTTCACCTTAGACTCGGAGGACCCGAGAGG +
Preference number: 6 (lower is better)
Translates to: RLQPRRQPQVDR*RLHLRLGGPER
Trigger: CCTCTCGGGTCCTCCGAGTCTAAGGTGAAGGCGTCACCTGTCGACCTGCGGCTGCCTGCGTGGTTGGAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS CAA 72 bp TCTATGCCAACCAAAAAGGGCTCTAACAAAACGACGTaGTTTGTGACTTTGGAGAAGGCCAGGGCGCCGAGG +
Preference number: 6 (lower is better)
Translates to: SMPTKKGSNKTT*FVTLEKARAPR
Trigger: CCTCGGCGCCCTGGCCTTCTCCAAAGTCACAAACAACGTCGTTTTGTTAGAGCCCTTTTTGGTTGGCATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2
CDS GCA 72 bp CCCTTCAGAAGCCCCGTCAGTGAGTTTAGACGAGTATaGATTAGCATTATCTTCTCTTTCAGCTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: PFRSPVSEFRRV*ISIIFSFSSAI
Trigger: GATTGCAGAGCTGAAAGAGAAGATAATGCTAATGCATACTCGTCTAAACTCACTGACGGGGCTTCTGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000123818.2