RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OGT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034160

Ensembl transcript IDs: ENSMUST00000044475.5, ENSMUST00000119299.8

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCAAGGGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTaGAAAACTCTAAGAGATTCCTTGTGGAATAGCATTTCTTCTTTC +
Preference number: 1 (lower is better)
Translates to: TKGDQTFQTCAPPVC*KTLRDSLWNSISSF
Trigger: GAAAGAAGAAATGCTATTCCACAAGGAATCTCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR TCA 90 bp CAGTCACAGGAGAATTTAACGGGAGCTGGGGTGTGTAAAACAGGCTaGAAAGTCTTAAGTCATCATCTAAACAAAGCACTGACAGTGCCA +
Preference number: 1 (lower is better)
Translates to: QSQENLTGAGVCKTG*KVLSHHLNKALTVP
Trigger: TGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAAGACTTTTCAGCCTGTTTTACACACCCCAGCTCCCGTTAAATTCTCCTGTGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR-3UTR TCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTTCCCCCAGAAGGTTaGGGCTCAGGTATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTLPPEG*GSGIGQ
Trigger: TTGCCCTATACCTGAGCCTCAACCTTCTGGGGGAAG...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGACCTTCCAGACCTGTaGACCACCTGTTTGCTGCAA +
Preference number: 2 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTDLPDL*TTCLLQ
Trigger: TTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTGACCTTCCAGACCTGTaGACCACCTGTTTGCTGCAA +
Preference number: 2 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTDLPDL*TTCLLQ
Trigger: TTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTC...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR TCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCTTCCCCCAGAAGGTTaGGGCTCAGGTATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCLPPEG*GSGIGQ
Trigger: TTGCCCTATACCTGAGCCTCAACCTTCTGGGGGAAG...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGCACCACCTGTTTGCTaGAAAACTCTAAGAGATTCC +
Preference number: 2 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTAPPVC*KTLRDS
Trigger: GGAATCTCTTAGAGTTTTGCAGCAAACAGGTGGTGC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR CAA 90 bp CAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAGATTCCTaGTGGAATAGCATTTCTTCTTTCTTGTCTCTCCCTATCATGCAG +
Preference number: 2 (lower is better)
Translates to: QTCAPPVCCKTLRDS*WNSISSFLSLPIMQ
Trigger: CTGCATGATAGGGAGAGACAAGAAAGAAGAAATGCTATTCCACAAGGAATCTCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR TCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGACAAGATCACTTCACATaGGTAAAAATACCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGQDHFT*VKIPES
Trigger: GCTTTCAGGTATTTTTACTCATGTGAAGTGATCTTG...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR-3UTR TCA 90 bp TCCAATCCCACATTTAGTAGTTCAGTGAATTCTGAAAATCAGTTTACCTGTAACGGGGCAGTCAAGGGCTaGAACACTGGTGAAACAGGT +
Preference number: 2 (lower is better)
Translates to: SNPTFSSSVNSENQFTCNGAVKG*NTGETG
Trigger: ACCTGTTTCACCAGTGTTTCAGCCCTTGACTGCCCC...GTTACAGGTAAACTGATTTTCAGAATTCACTGAACTACTAAATGTGGGATTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTTGTGCACCACCTGTTTaGTGCAAAACTCTAAGAGAT +
Preference number: 2 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCCAPPV*CKTLRD
Trigger: ATCTCTTAGAGTTTTGCAGCAAACAGGTGGTGCACA...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR GCA 90 bp GGTCTTCCACAGATAGGTTACCTGGAAATAAAAGCCTGTTACAATAAGCAAAGCCATTCAGGCAATAGCTaGAACTACAGAATAGGTGCA +
Preference number: 2 (lower is better)
Translates to: GLPQIGYLEIKACYNKQSHSGNS*NYRIGA
Trigger: TGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG...GCTTTGCTTATTGTAACAGGCTTTTATTTCCAGGTAACCTATCTGTGGAAGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR-3UTR CCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAACTAAGAGATTCCTTGTaGAATAGCATTTCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKLRDSL*NSISSF
Trigger: GAAAGAAGAAATGCTATTCCACAAGGAATCTCTTAG...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR GCA 90 bp GGTCTTCCACAGATAGGTTACCTGGAAATAAAAGCCTGTTACAATAAGCAAAGCACACAGTTCACACAATaGAATTCTGCTATCAGAATT +
Preference number: 2 (lower is better)
Translates to: GLPQIGYLEIKACYNKQSTQFTQ*NSAIRI
Trigger: AATTCTGATAGCAGAATTGCATTGTGTGAACTGTGT...GCTTTGCTTATTGTAACAGGCTTTTATTTCCAGGTAACCTATCTGTGGAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR-3UTR CAA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTCCTTCCCCCAGAAGGTaGAGGCTCAGGTATAGGGCA +
Preference number: 3 (lower is better)
Translates to: RLDQSTASQNGWLISISPPSPRR*RLRYRA
Trigger: TGCCCTATACCTGAGCCTCAACCTTCTGGGGGAAGG...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR TCA 72 bp CAAAGCATGTTATCTAGTTCCCTTCCCCCAGAAGGTTaGGGCTCAGGTATAGGGCAATTCTCCTGTGCGCAG +
Preference number: 3 (lower is better)
Translates to: QSMLSSSLPPEG*GSGIGQFSCAQ
Trigger: CTGCGCACAGGAGAATTGCCCTATACCTGAGCCTCAACCTTCTGGGGGAAGGGAACTAGATAACATGCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR GCA 72 bp ATGGAAGACCAAGGGAGACCAGACCTTCCAGACCTGTaGACCACCTGTTTGCTGCAAAACTCTAAGAGATTC +
Preference number: 3 (lower is better)
Translates to: MEDQGRPDLPDL*TTCLLQNSKRF
Trigger: GAATCTCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCCCTTGGTCTTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCCCTTCCCCCAGAAGGTaGAGGCTCAGGTATAGGGCA +
Preference number: 3 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPPSPRR*RLRYRA
Trigger: TGCCCTATACCTGAGCCTCAACCTTCTGGGGGAAGG...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR CAA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAAGCATTTCTTCTTTCTaGTCTCTCCCTATCATGCAG +
Preference number: 3 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRSISSF*SLPIMQ
Trigger: CTGCATGATAGGGAGAGACAAGAAAGAAGAAATGCT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
3UTR-3UTR CAA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTCCTAAGAATTTTCATTaGGCACCAGATGGCATGTTC +
Preference number: 3 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTPKNFH*APDGMF
Trigger: GAACATGCCATCTGGTGCCAAATGAAAATTCTTAGG...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR TCA 72 bp CTCCACCCTTTACGGAAATGCAACTGTTTTCTACCATaGAGAACTCAAGCTCCGCGAGGGCCAATGTTTAAT +
Preference number: 3 (lower is better)
Translates to: LHPLRKCNCFLP*RTQAPRGPMFN
Trigger: ATTAAACATTGGCCCTCGCGGAGCTTGAGTTCTTCATGGTAGAAAACAGTTGCATTTCCGTAAAGGGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
3UTR-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCAGCATTTCTTCTTTCTaGTCTCTCCCTATCATGCAG +
Preference number: 3 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPSISSF*SLPIMQ
Trigger: CTGCATGATAGGGAGAGACAAGAAAGAAGAAATGCT...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGATGCATCAGTGCTTCCTaGAGCTTGCCCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRCISAS*SLPCCC
Trigger: GCAACAGCAGGGCAAGCTGCAGGAAGCACTGATGCA...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGACCGTGCACCACCGCATaGTTTGGGCTCAAACTTAAG +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRPCTTA*FGLKLK
Trigger: CTTAAGTTTGAGCCCAAATCATGCGGTGGTGCACGG...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAGGCCTGAATAGGAGCTaGCCTAAGAGCAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRGLNRS*PKSKEL
Trigger: GAGCTCTTTGCTCTTAGGCCAGCTCCTATTCAGGCC...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTCAGACATCAGCCAGCTaGCCTCTCCTGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPQTSAS*PLLTCS
Trigger: GGAGCATGTCAGGAGAGGTCAGCTGGCTGATGTCTG...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAGGTTCCCCAGGTCACTaGGAACACAGTACAAATCAG +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRGSPGH*EHSTNQ
Trigger: CTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACC...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAACACACAAGCCAGGTTaGCGTGCACCACCGCATGAT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTTHKPG*RAPPHD
Trigger: ATCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGTGCTTCCTGCAGCTTaGCCTGCTGTTGCAGTACAC +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTVLPAA*PAVAVH
Trigger: GTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCAC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGATGCATCAGTGCTTCCTaGAGCTTGCCCTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGCISAS*SLPCCC
Trigger: GCAACAGCAGGGCAAGCTGCAGGAAGCACTGATGCA...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGATGTGGTCAGGTTTGTTaGCAGCTGCATAATGCTCCC +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRCGQVC*QLHNAP
Trigger: GGGAGCATTATGCAGCTGGCAACAAACCTGACCACA...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKSDPGL*AGSPGH
Trigger: GTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCT...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGATCTCCCCTTGTGCATTaGAAACACAGCCGAGATTAC +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRSPLVH*KHSRDY
Trigger: GTAATCTCGGCTGTGTTTTCAATGCACAAGGGGAGA...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACCGTGCACCACCGCATaGTTTGGGCTCAAACTTAAG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTPCTTA*FGLKLK
Trigger: CTTAAGTTTGAGCCCAAATCATGCGGTGGTGCACGG...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGCAGTGTCTCTCAGCTaGCTCAAAATCTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTAVSLS*LKISCL
Trigger: CAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAATCCTTCCATGTCACCTaGTGCTACCAAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKSFHVT*CYQGCC
Trigger: GCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGA...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTTCCTTCCATGTCACCTaGTGCTACCAAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTSFHVT*CYQGCC
Trigger: GCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGA...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTACACACAAGCCAGGTTaGCGTGCACCACCGCATGAT +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPTHKPG*RAPPHD
Trigger: ATCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGT...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTTCGGGGAAATGGGGTTaGAGTTCGATAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTSGKWG*SSIALL
Trigger: CAGGAGAGCTATCGAACTGCAACCCCATTTCCCCGA...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp TGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAATCTCCTGCAGCTTGCCCTaGTGTTGCAGTACACTTGCT +
Preference number: 4 (lower is better)
Translates to: CKWPQISASAALQVYYPISCSLP*CCSTLA
Trigger: AGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGA...GATTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGTGCTTCCTGCAGCTTaGCCTGCTGTTGCAGTACAC +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKVLPAA*PAVAVH
Trigger: GTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCAC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGATTTATAGTGCATCAGTaGTTCCTGCAGCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRFIVHQ*FLQLAL
Trigger: CAGGGCAAGCTGCAGGAAGCACTGATGCACTATAAA...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGACTCAGAATACTGCTCTaGAACTTCAGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRLRILL*NFSWGS
Trigger: ACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAG...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTCACCATGGGTGTTCCTaGCCAGAGAACATCCATCCC +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPHHGCS*PENIHP
Trigger: GGGATGGATGTTCTCTGGGCAGGAACACCCATGGTG...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGATCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRSKSPA*YSRCAN
Trigger: GTTGGCACATCGAGAATATCAGGCAGGAGATTTTGA...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGCCAAGGTGCTAAAATaGGCAGATCTGTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTAKVLK*ADLSSL
Trigger: AAGGCTGGACAGATCTGCTCATTTTAGCACCTTGGC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACATTCCCTGAATCCTTGTaGATGGAGGCCAGATTGCTG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTFPESL*MEARLL
Trigger: CAGCAATCTGGCCTCCATTCACAAGGATTCAGGGAA...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACATACAGCATGCTATGGTaGGGATGGACAGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTYSMLW*GWTEGS
Trigger: ACTGCCTTCTGTCCATCCTCACCATAGCATGCTGTA...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTCCACAGGTGAGAAAATaGTACGGTTCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTPQVRK*YGSGEG
Trigger: GCCTTCCCCAGAACCGTATCATTTTCTCACCTGTGG...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTCCACAGGTGAGAAAATaGTACGGTTCTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPPQVRK*YGSGEG
Trigger: GCCTTCCCCAGAACCGTATCATTTTCTCACCTGTGG...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGACATCAGCCAGCTaGCCTCTCCTGACATGCTCC +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCQTSAS*PLLTCS
Trigger: GGAGCATGTCAGGAGAGGTCAGCTGGCTGATGTCTG...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGCAGTGTCTCTCAGCTaGCTCAAAATCTCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKAVSLS*LKISCL
Trigger: CAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACATCTTGTCTCCAGAGCTaGATGCAGTGTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTSCLQS*MQCLSA
Trigger: AGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGA...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAATTGCTTCCTGCAACTaGCCTCTTTCCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRIASCN*PLSLYT
Trigger: TGTGTACAAGGAAAGAGGGCAGTTGCAGGAAGCAAT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGACATAGGCTTGTACTaGTCCTTCCATGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTDIGLY*SFHVTC
Trigger: GCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAATTACTCCAGGCTACTaGAAAGTTTGGTTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRITPGY*KVWLRL
Trigger: GAGACGCAACCAAACTTTGCAGTAGCCTGGAGTAAT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAGGCACGAAGATAAGCTaGGACAGCTCTGTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRGTKIS*DSSVKN
Trigger: ATTTTTGACAGAGCTGTCGCAGCTTATCTTCGTGCC...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTCGGGGAAATGGGGTTaGAGTTCGATAGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPSGKWG*SSIALL
Trigger: CAGGAGAGCTATCGAACTGCAACCCCATTTCCCCGA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGCGATACAGGCGAACTaGCTCTTCAATGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKAIQAN*LFNVAL
Trigger: CAGGGCAACATTGAAGAGGCAGTTCGCCTGTATCGC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTGCGATACAGGCGAACTaGCTCTTCAATGTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTAIQAN*LFNVAL
Trigger: CAGGGCAACATTGAAGAGGCAGTTCGCCTGTATCGC...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTTCCTGCAGCTTGCCCTaGTGTTGCAGTACACTTGCT +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTSCSLP*CCSTLA
Trigger: AGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGA...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGCGCCCTGCACATCCTaGATCTCCTTTAGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTAPCTS*ISFRVF
Trigger: AAACACTCTAAAGGAGATGCAGGATGTGCAGGGCGC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTCACTGCAAAGCGCCCTaGACATCCTGCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTHCKAP*TSCISF
Trigger: AAAGGAGATGCAGGATGTGCAGGGCGCTTTGCAGTG...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGCCTTCCTGAAGCCATaGGAAAGAGGGTACAGCATG +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKAFLKP*ERGYSM
Trigger: CATGCTGTACCCTCTTTCCCATGGCTTCAGGAAGGC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTTCTCCCCTTGTGCATTaGAAACACAGCCGAGATTAC +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTSPLVH*KHSRDY
Trigger: GTAATCTCGGCTGTGTTTTCAATGCACAAGGGGAGA...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTACAGCATGCTATGGTaGGGATGGACAGAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPYSMLW*GWTEGS
Trigger: ACTGCCTTCTGTCCATCCTCACCATAGCATGCTGTA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTGCAATCGGCCATCACTaGGCTTCAAGTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTAIGHH*ASSLLD
Trigger: ATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGC...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTCTTGTCTCCAGAGCTaGATGCAGTGTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPSCLQS*MQCLSA
Trigger: AGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACATCGATAATGCTCGATTaGTTCCTGCAACTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTSIMLD*FLQLPS
Trigger: AGAGGGCAGTTGCAGGAAGCAATCGAGCATTATCGA...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTGACATAGGCTTGTACTaGTCCTTCCATGTCACCTGC +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTDIGLY*SFHVTC
Trigger: GCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTC...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACCAAATCTCCCCTTGTaGATTGAAAACACAGCCGAG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTPNLPL*IENTAE
Trigger: CTCGGCTGTGTTTTCAATGCACAAGGGGAGATTTGG...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAGTTATTCAAAGAGTCTaGATGAGTAGGACACAGACG +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRVIQRV*MSRTQT
Trigger: CGTCTGTGTCCTACTCATGCAGACTCTTTGAATAAC...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAATCTTTATAGTGCATCAGTaGTTCCTGCAGCTTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CKWPQISASAALQVYYPIFIVHQ*FLQLAL
Trigger: CAGGGCAAGCTGCAGGAAGCACTGATGCACTATAAA...GATTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTGGCCAGATTGCTGTGTaGATCAGCAAAGGCAGGATT +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPGQIAV*ISKGRI
Trigger: AATCCTGCCTTTGCTGATGCACACAGCAATCTGGCC...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAAAGAGGGTACAGCATaGTATGGTGAGGATGGACAG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTKEGTA*YGEDGQ
Trigger: CTGTCCATCCTCACCATAGCATGCTGTACCCTCTTT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTAAGCAGAGATTCCCATaGCTCTCTGCAATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTKQRFP*LSAIAF
Trigger: GAAGGCTATTGCAGAGAGGCATGGGAATCTCTGCTT...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAAGCAGAGATTCCCATaGCTCTCTGCAATAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTKQRFP*LSAIAF
Trigger: GAAGGCTATTGCAGAGAGGCATGGGAATCTCTGCTT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTTTCCATCTTGGTGGATaGGGTCGGCTGCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTFHLGG*GRLLFH
Trigger: ATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAA...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTGTAATCCATGAACAGTaGACCACTAGTCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTVIHEQ*TTSPRV
Trigger: TACCCTGGGACTAGTGGTGCACTGTTCATGGATTAC...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAGTAAGCTGAGAAGCTaGAACTCGAGAGGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTSKLRS*NSRGKS
Trigger: ACTCTTGCCTCTCGAGTTGCAGCTTCTCAGCTTACT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAGGTTTGTTGCCAGCTaGATAATGCTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTRFVAS*IMLPHL
Trigger: CAGATGTGGGAGCATTATGCAGCTGGCAACAAACCT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAGGCTACTGCAAAGTTTaGTTGCGTCTCAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRGYCKV*LRLNCF
Trigger: AAAGCAATTGAGACGCAACCAAACTTTGCAGTAGCC...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTGAATCCTTGTGAATaGAGGCCAGATTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTLNPCE*RPDCCV
Trigger: CACACAGCAATCTGGCCTCCATTCACAAGGATTCAG...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAAGGATTATGCATGCCTaGAATAGACTGCATAAGGTG +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRRIMHA*NRLHKV
Trigger: CACCTTATGCAGTCTATTCCAGGCATGCATAATCCT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp TGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAATCTGTGTTACTGCTGTCTaGATTGTCACCTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: CKWPQISASAALQVYYPICVTAV*IVTSIR
Trigger: CCTGATGGAGGTGACAATCCAGACAGCAGTAACACA...GATTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTSKSPA*YSRCAN
Trigger: GTTGGCACATCGAGAATATCAGGCAGGAGATTTTGA...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAATATTCACAAGGATGTaGATTCCATCTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRIFTRM*IPSWWM
Trigger: CATCCACCAAGATGGAATTCACATCCTTGTGAATAT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTTGCCTCAAAATCTCCTaGCTGATATTCTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTCLKIS*LIFSMC
Trigger: GCACATCGAGAATATCAGGCAGGAGATTTTGAGGCA...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCTCCAGAGCTGCATaGAGTGTCTCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPVSRAA*SVSQLP
Trigger: AGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGAC...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAATCGATAATGCTCGATTaGTTCCTGCAACTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKSIMLD*FLQLPS
Trigger: AGAGGGCAGTTGCAGGAAGCAATCGAGCATTATCGA...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGATGCTACCAAGGCTGCTaGCAGGTTAATATAACCATC +
Preference number: 4 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGCYQGC*QVNITI
Trigger: GATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCA...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTGCTGCTACCAAGGCTaGTGCCAGGTTAATATAACC +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPCCYQG*CQVNIT
Trigger: GGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAACCAAATCTCCCCTTGTaGATTGAAAACACAGCCGAG +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKPNLPL*IENTAE
Trigger: CTCGGCTGTGTTTTCAATGCACAAGGGGAGATTTGG...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAGACTTCTAATGCTTTaGGATACAGGCGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTRLLML*DTGELP
Trigger: AGGCAGTTCGCCTGTATCGCAAAGCATTAGAAGTCT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAAAAAGAGGGTACAGCATaGTATGGTGAGGATGGACAG +
Preference number: 4 (lower is better)
Translates to: YVNGHRSQPQRHSKSIIQKEGTA*YGEDGQ
Trigger: CTGTCCATCCTCACCATAGCATGCTGTACCCTCTTT...TTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAATGCCTGGAATAGACTaGATAAGGTGTGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTMPGID*IRCEVG
Trigger: CCCTACTTCACACCTTATGCAGTCTATTCCAGGCAT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGATCTGTTTCCAGACTTTaGCACGAATTTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRSVSRL*HEFSSG
Trigger: ACCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGA...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTAGCATCCAGAAAATTTaGGTCAAGGGTGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTSIQKI*VKGDSL
Trigger: AAGGCTGTCACCCTTGACCCAAATTTTCTGGATGCT...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAGCATCCAGAAAATTTaGGTCAAGGGTGACAGCCTT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTSIQKI*VKGDSL
Trigger: AAGGCTGTCACCCTTGACCCAAATTTTCTGGATGCT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTCTCTGCAACTTCAGCTaGGGAAGTTTCCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTLCNFS*GSFLIS
Trigger: ACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAG...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTCTGGTAGCCCATACTaGGAACGGGTGGTTACAATA +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPSGSPY*ERVVTI
Trigger: TATTGTAACCACCCGTTCCCAGTATGGGCTACCAGA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGAAAGATCAATGAAATaGTTGGCTTCCGCCATCACC +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKERSMK*LASAIT
Trigger: GGTGATGGCGGAAGCCAATCATTTCATTGATCTTTC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAATGCTACCAAGGCTGCTaGCAGGTTAATATAACCATC +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKCYQGC*QVNITI
Trigger: GATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCA...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAACTGCAAAGTTTGGTTaGGTCTCAATTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRTAKFG*VSIAFK
Trigger: TTTGAAAGCAATTGAGACGCAACCAAACTTTGCAGT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTGTTATTCAAAGAGTCTaGATGAGTAGGACACAGACG +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTVIQRV*MSRTQT
Trigger: CGTCTGTGTCCTACTCATGCAGACTCTTTGAATAAC...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAGACTTCTAATGCTTTaGGATACAGGCGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTRLLML*DTGELP
Trigger: AGGCAGTTCGCCTGTATCGCAAAGCATTAGAAGTCT...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAACACTGCAAAGCGCCCTaGACATCCTGCATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKHCKAP*TSCISF
Trigger: AAAGGAGATGCAGGATGTGCAGGGCGCTTTGCAGTG...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAATGCCTGGAATAGACTaGATAAGGTGTGAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKMPGID*IRCEVG
Trigger: CCCTACTTCACACCTTATGCAGTCTATTCCAGGCAT...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAACGTTTCAGAATATTTaGCCACATCTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGTFQNI*PHLQGR
Trigger: TCTACCCTGCAGATGTGGGCAAATATTCTGAAACGT...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACATCCAGCCTTCGACACTaGAAGTGTATAGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTSSLRH*KCIDES
Trigger: ACTTTCATCTATACACTTCCAGTGTCGAAGGCTGGA...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTTCAAATAACATGCCTTaGCTTCTTCCAAGCGACCCA +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTSNNMP*LLPSDP
Trigger: TGGGTCGCTTGGAAGAAGCCAAGGCATGTTATTTGA...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGGCTACTGCAAAGTTTaGTTGCGTCTCAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTGYCKV*LRLNCF
Trigger: AAAGCAATTGAGACGCAACCAAACTTTGCAGTAGCC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAGGCCTGAATAGGAGCTaGCCTAAGAGCAAAGAGCTC +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKGLNRS*PKSKEL
Trigger: GAGCTCTTTGCTCTTAGGCCAGCTCCTATTCAGGCC...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAGTTACAGTACACAATaGCATCTTCTGGTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGSYSTQ*HLLVAH
Trigger: ATGGGCTACCAGAAGATGCCATTGTGTACTGTAACT...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTGGGTTCTCCTACTGCTaGAAAACGCAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCGFSYC*KTQQPK
Trigger: CTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCC...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGCCAAGGTGCTAAAATaGGCAGATCTGTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPAKVLK*ADLSSL
Trigger: AAGGCTGGACAGATCTGCTCATTTTAGCACCTTGGC...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAATTCCCTGAATCCTTGTaGATGGAGGCCAGATTGCTG +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKFPESL*MEARLL
Trigger: CAGCAATCTGGCCTCCATTCACAAGGATTCAGGGAA...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCGCAATCGGCCATCACTaGGCTTCAAGTCTTTTGGAT +
Preference number: 4 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPAIGHH*ASSLLD
Trigger: ATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGC...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTAGACTGCATAAGGTGTaGAGTAGGGTGATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCRLHKV*SRVIPE
Trigger: TTCGGGAATCACCCTACTTCACACCTTATGCAGTCT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACATATCGAGAAATGCTTTaGGATCGATGCCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTYREML*DRCHSE
Trigger: TTCTGAATGGCATCGATCTCAAAGCATTTCTCGATA...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTTGCTGCTACCAAGGCTaGTGCCAGGTTAATATAACC +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCCCYQG*CQVNIT
Trigger: GGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCA...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTGGTTCCCCAGGTCACTaGGAACACAGTACAAATCAG +
Preference number: 4 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTGSPGH*EHSTNQ
Trigger: CTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACC...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTGCTTTCAAATAACATaGCTTGGCTTCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPCFQIT*LGFFQA
Trigger: CGCTTGGAAGAAGCCAAGGCATGTTATTTGAAAGCA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAACAGCTCTGTCAAAAATaGGTGCCTCTTTCAAGACAT +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKQLCQK*VPLSRH
Trigger: ATGTCTTGAAAGAGGCACGCATTTTTGACAGAGCTG...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAGGCCAGATTGCTGTGTaGATCAGCAAAGGCAGGATT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKGQIAV*ISKGRI
Trigger: AATCCTGCCTTTGCTGATGCACACAGCAATCTGGCC...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAATTCCATCTTGGTGGATaGGGTCGGCTGCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKFHLGG*GRLLFH
Trigger: ATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAA...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTGTAATCCATGAACAGTaGACCACTAGTCCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCVIHEQ*TTSPRV
Trigger: TACCCTGGGACTAGTGGTGCACTGTTCATGGATTAC...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTATTGGGTTCTCCTACTaGTGGAAAACGCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCIGFSY*WKTQQP
Trigger: TGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAAT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCAGTAAGCTGAGAAGCTaGAACTCGAGAGGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPSKLRS*NSRGKS
Trigger: ACTCTTGCCTCTCGAGTTGCAGCTTCTCAGCTTACT...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTTGTGGTCAGGTTTGTTaGCAGCTGCATAATGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTCGQVC*QLHNAP
Trigger: GGGAGCATTATGCAGCTGGCAACAAACCTGACCACA...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAAACTCAGCTAACCCTTaGAAGGAAAGCATACGTTTC +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKNSANP*KESIRF
Trigger: GAAACGTATGCTTTCCTTCCAAGGGTTAGCTGAGTT...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp TATGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAATCCAGCCTTCGACACTaGAAGTGTATAGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: YVNGHRSQPQRHSKSIIQSSLRH*KCIDES
Trigger: ACTTTCATCTATACACTTCCAGTGTCGAAGGCTGGA...TTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTGTACACTTGCTAAATTaGAATGTGCAGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTVHLLN*NVQQQT
Trigger: AGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTAC...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGTACACTTGCTAAATTaGAATGTGCAGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTVHLLN*NVQQQT
Trigger: AGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTAC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCTGAATCCTTGTGAATaGAGGCCAGATTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCLNPCE*RPDCCV
Trigger: CACACAGCAATCTGGCCTCCATTCACAAGGATTCAG...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAACATTCCGAGCACCCTTaGTATACCCATTCATATTCA +
Preference number: 4 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKHSEHP*YTHSYS
Trigger: TGAATATGAATGGGTATACCAAGGGTGCTCGGAATG...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGGGTTCTCCTACTGCTaGAAAACGCAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPGFSYC*KTQQPK
Trigger: CTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCC...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAAAAATGATACGGTTCTaGGGAAGGCCCATATTTTGT +
Preference number: 4 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTKMIRF*GRPIFC
Trigger: ACAAAATATGGGCCTTCCCCAGAACCGTATCATTTT...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTAGACTGCATAAGGTGTaGAGTAGGGTGATTCCCGAA +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPRLHKV*SRVIPE
Trigger: TTCGGGAATCACCCTACTTCACACCTTATGCAGTCT...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTTATCGAGAAATGCTTTaGGATCGATGCCATTCAGAA +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTYREML*DRCHSE
Trigger: TTCTGAATGGCATCGATCTCAAAGCATTTCTCGATA...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGCCTCAAAATCTCCTaGCTGATATTCTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPCLKIS*LIFSMC
Trigger: GCACATCGAGAATATCAGGCAGGAGATTTTGAGGCA...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAACTGCAAAGTTTGGTTaGGTCTCAATTGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGTAKFG*VSIAFK
Trigger: TTTGAAAGCAATTGAGACGCAACCAAACTTTGCAGT...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTATTACTCCAGGCTACTaGAAAGTTTGGTTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCITPGY*KVWLRL
Trigger: GAGACGCAACCAAACTTTGCAGTAGCCTGGAGTAAT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTGTTATAACAATCTTCTaGTTCAGCAACACTGCCCTT +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTVITIF*FSNTAL
Trigger: AAGGGCAGTGTTGCTGAAGCAGAAGATTGTTATAAC...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTCTATTCTTCTCTAGCTaGTCAGCTACAATACTAACC +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTLFFSS*SATILT
Trigger: GGTTAGTATTGTAGCTGAGCAGCTAGAGAAGAATAG...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAACTTATCAGGATTATaGATGCCTGGAATAGACTGC +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTNLSGL*MPGIDC
Trigger: GCAGTCTATTCCAGGCATGCATAATCCTGATAAGTT...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAACTCAGAATACTGCTCTaGAACTTCAGCTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKLRILL*NFSWGS
Trigger: ACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAG...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTATTGGGTTCTCCTACTaGTGGAAAACGCAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTIGFSY*WKTQQP
Trigger: TGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAAT...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAGCATACGTTTCGTTaGTTCTGTACTGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTKHTFR*FCTVGH
Trigger: GTGGCCGACAGTACAGAACCAACGAAACGTATGCTT...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAACTCTGCAACTTCAGCTaGGGAAGTTTCCTGATCAGT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKLCNFS*GSFLIS
Trigger: ACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAG...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTGTGTTACTGCTGTCTaGATTGTCACCTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPCVTAV*IVTSIR
Trigger: CCTGATGGAGGTGACAATCCAGACAGCAGTAACACA...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAATCTGGTAGCCCATACTaGGAACGGGTGGTTACAATA +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKSGSPY*ERVVTI
Trigger: TATTGTAACCACCCGTTCCCAGTATGGGCTACCAGA...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGACATATTGTTGAATATTaGGTTCTCCTACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGHIVEY*VLLLLE
Trigger: TTCCAGCAGTAGGAGAACCCAATATTCAACAATATG...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp GGTCTTCCACAGATAGGTTACCTGGAAATAAAAGCCTGTTACAATAAGCAAAGCTTCAAAGAGTCTGCATaGGTAGGACACAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: GLPQIGYLEIKACYNKQSFKESA*VGHRRR
Trigger: TCTTCGTCTGTGTCCTACTCATGCAGACTCTTTGAA...GCTTTGCTTATTGTAACAGGCTTTTATTTCCAGGTAACCTATCTGTGGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR TCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTTCAAAGAGTCTGCATaGGTAGGACACAGACGAAGA +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPFKESA*VGHRRR
Trigger: TCTTCGTCTGTGTCCTACTCATGCAGACTCTTTGAA...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGAAAGATCAATGAAATaGTTGGCTTCCGCCATCACC +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPERSMK*LASAIT
Trigger: GGTGATGGCGGAAGCCAATCATTTCATTGATCTTTC...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTTTAGGAGCCACAGGTaGGAAAATGATACGGTTCTG +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPFRSHR*ENDTVL
Trigger: CAGAACCGTATCATTTTCTCACCTGTGGCTCCTAAA...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAATTGCTTCCTGCAACTaGCCTCTTTCCTTGTACACA +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKIASCN*PLSLYT
Trigger: TGTGTACAAGGAAAGAGGGCAGTTGCAGGAAGCAAT...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp TATGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAATGGTTGCGTCTCAATTaGTTTCAAATAACATGCCTT +
Preference number: 4 (lower is better)
Translates to: YVNGHRSQPQRHSKSIIQWLRLN*FQITCL
Trigger: AAGGCATGTTATTTGAAAGCAATTGAGACGCAACCA...TTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGCTCTGTCAAAAATaGGTGCCTCTTTCAAGACAT +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCQLCQK*VPLSRH
Trigger: ATGTCTTGAAAGAGGCACGCATTTTTGACAGAGCTG...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAGGCACGAAGATAAGCTaGGACAGCTCTGTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKGTKIS*DSSVKN
Trigger: ATTTTTGACAGAGCTGTCGCAGCTTATCTTCGTGCC...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCACGTTTCAGAATATTTaGCCACATCTGCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPTFQNI*PHLQGR
Trigger: TCTACCCTGCAGATGTGGGCAAATATTCTGAAACGT...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTGAGTGTTTCCCATATTaGAATAAGCATCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPECFPY*NKHQQM
Trigger: CATTTGCTGATGCTTATTCCAATATGGGAAACACTC...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTAGTTACAGTACACAATaGCATCTTCTGGTAGCCCAT +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCSYSTQ*HLLVAH
Trigger: ATGGGCTACCAGAAGATGCCATTGTGTACTGTAACT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CCA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAACAGGCTTAATCATGTaGTCAGGTTTGTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKTGLIM*SGLLPA
Trigger: AGCTGGCAACAAACCTGACCACATGATTAAGCCTGT...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTACAGGCTTAATCATGTaGTCAGGTTTGTTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPTGLIM*SGLLPA
Trigger: AGCTGGCAACAAACCTGACCACATGATTAAGCCTGT...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR TCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTATATTCACAAGGATGTaGATTCCATCTTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCIFTRM*IPSWWM
Trigger: CATCCACCAAGATGGAATTCACATCCTTGTGAATAT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCGTTATAACAATCTTCTaGTTCAGCAACACTGCCCTT +
Preference number: 4 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPVITIF*FSNTAL
Trigger: AAGGGCAGTGTTGCTGAAGCAGAAGATTGTTATAAC...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTAACTTATCAGGATTATaGATGCCTGGAATAGACTGC +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCNLSGL*MPGIDC
Trigger: GCAGTCTATTCCAGGCATGCATAATCCTGATAAGTT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAGGCCCATATTTTGTaGATATTGTTGAATATTGGG +
Preference number: 4 (lower is better)
Translates to: YKKTTPARSLSPCQSSDTKAHIL*ILLNIG
Trigger: CCCAATATTCAACAATATGCACAAAATATGGGCCTT...AGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTAAGGCCCATATTTTGTaGATATTGTTGAATATTGGG +
Preference number: 4 (lower is better)
Translates to: RLDQSTASQNGWLISISPKAHIL*ILLNIG
Trigger: CCCAATATTCAACAATATGCACAAAATATGGGCCTT...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGGTTGCGTCTCAATTaGTTTCAAATAACATGCCTT +
Preference number: 4 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPWLRLN*FQITCL
Trigger: AAGGCATGTTATTTGAAAGCAATTGAGACGCAACCA...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTCTATTCTTCTCTAGCTaGTCAGCTACAATACTAACC +
Preference number: 4 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTLFFSS*SATILT
Trigger: GGTTAGTATTGTAGCTGAGCAGCTAGAGAAGAATAG...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR GCA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTCTGTTTCCAGACTTTaGCACGAATTTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPSVSRL*HEFSSG
Trigger: ACCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGA...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TCCAATCCCACATTTAGTAGTTCAGTGAATTCTGAAAATCAGTTTACCTGTAACAGGTTTGTTGCCAGCTaGATAATGCTCCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SNPTFSSSVNSENQFTCNRFVAS*IMLPHL
Trigger: CAGATGTGGGAGCATTATGCAGCTGGCAACAAACCT...GTTACAGGTAAACTGATTTTCAGAATTCACTGAACTACTAAATGTGGGATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCATATTGTTGAATATTaGGTTCTCCTACTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCHIVEY*VLLLLE
Trigger: TTCCAGCAGTAGGAGAACCCAATATTCAACAATATG...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR GCA 90 bp TCCAATCCCACATTTAGTAGTTCAGTGAATTCTGAAAATCAGTTTACCTGTAACTGCTTTCAAATAACATaGCTTGGCTTCTTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: SNPTFSSSVNSENQFTCNCFQIT*LGFFQA
Trigger: CGCTTGGAAGAAGCCAAGGCATGTTATTTGAAAGCA...GTTACAGGTAAACTGATTTTCAGAATTCACTGAACTACTAAATGTGGGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp TCCAATCCCACATTTAGTAGTTCAGTGAATTCTGAAAATCAGTTTACCTGTAACAGGATTATGCATGCCTaGAATAGACTGCATAAGGTG +
Preference number: 4 (lower is better)
Translates to: SNPTFSSSVNSENQFTCNRIMHA*NRLHKV
Trigger: CACCTTATGCAGTCTATTCCAGGCATGCATAATCCT...GTTACAGGTAAACTGATTTTCAGAATTCACTGAACTACTAAATGTGGGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp TCCAATCCCACATTTAGTAGTTCAGTGAATTCTGAAAATCAGTTTACCTGTAACCATTCCGAGCACCCTTaGTATACCCATTCATATTCA +
Preference number: 4 (lower is better)
Translates to: SNPTFSSSVNSENQFTCNHSEHP*YTHSYS
Trigger: TGAATATGAATGGGTATACCAAGGGTGCTCGGAATG...GTTACAGGTAAACTGATTTTCAGAATTCACTGAACTACTAAATGTGGGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CCA 90 bp TCCAATCCCACATTTAGTAGTTCAGTGAATTCTGAAAATCAGTTTACCTGTAACAAAATGATACGGTTCTaGGGAAGGCCCATATTTTGT +
Preference number: 4 (lower is better)
Translates to: SNPTFSSSVNSENQFTCNKMIRF*GRPIFC
Trigger: ACAAAATATGGGCCTTCCCCAGAACCGTATCATTTT...GTTACAGGTAAACTGATTTTCAGAATTCACTGAACTACTAAATGTGGGATTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS TCA 90 bp CAGAGCTGCATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTGTACTGTCGGCC +
Preference number: 5 (lower is better)
Translates to: QSCMQCLSAASKSPA*YSRCANSANPVLSA
Trigger: GGCCGACAGTACAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119299.8
CDS GCA 90 bp TGGCCAGGTCTATTAGGCCTTGCTCGTAGTACACACAAGCCAGGTTaGCGTGCACCACCGCATGATTTGGGCTCAAACTTAAGGCACGAA +
Preference number: 5 (lower is better)
Translates to: WPGLLGLARSTHKPG*RAPPHDLGSNLRHE
Trigger: TTCGTGCCTTAAGTTTGAGCCCAAATCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGTACTACGAGCAAGGCCTAATAGACCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp TCGAGAGGCAAGAGTCTCTCCTGGCATAGTCACCATGGGTGTTCCTaGCCAGAGAACATCCATCCCTGTGGTGTGTCCATTACACAAAGG +
Preference number: 5 (lower is better)
Translates to: SRGKSLSWHSHHGCS*PENIHPCGVSITQR
Trigger: CCTTTGTGTAATGGACACACCACAGGGATGGATGTTCTCTGGGCAGGAACACCCATGGTGACTATGCCAGGAGAGACTCTTGCCTCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGCGACCCAGGGCTTaGAGCAGGTTCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGKRPRA*SRFPRS
Trigger: TGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTT...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS GCA 90 bp AGCTGGGGAAGTTTCCTGATCAGTGATGATGTAATCCATGAACAGTaGACCACTAGTCCCAGGGTAGCCCAGCCACATGGCCTGAATAGG +
Preference number: 5 (lower is better)
Translates to: SWGSFLISDDVIHEQ*TTSPRVAQPHGLNR
Trigger: CCTATTCAGGCCATGTGGCTGGGCTACCCTGGGACTAGTGGTGCACTGTTCATGGATTACATCATCACTGATCAGGAAACTTCCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTAAGCGACCCAGGGCTTaGAGCAGGTTCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RLDQSTASQNGWLISISPKRPRA*SRFPRS
Trigger: TGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTT...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAATCGGGGAAATGGGGTaGCAGTTCGATAGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRIGEMG*QFDSSP
Trigger: AGGAGAGCTATCGAACTGCAACCCCATTTCCCCGAT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp CAGAGCTGCATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTTGGAAGGAAAGC +
Preference number: 5 (lower is better)
Translates to: QSCMQCLSAASKSPA*YSRCANSANPWKES
Trigger: GCTTTCCTTCCAAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS GCA 90 bp ATTGTCAGGCTCTTGTCTCCAGAGCTGCATGCAGTGTCTCTCAGCTaGCTCAAAATCTCCTGCCTGATATTCTCGATGTGCCAACTCAGC +
Preference number: 5 (lower is better)
Translates to: IVRLLSPELHAVSLS*LKISCLIFSMCQLS
Trigger: GCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCTGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp CTTTCAAATAACATGCCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACAAATCAGGAT +
Preference number: 5 (lower is better)
Translates to: LSNNMPWLLPSDPGL*AGSPGHCEHSTNQD
Trigger: ATCCTGATTTGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGCATGTTATTTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp ATAGCCTTCCTGAAGCCATGGGAAAGAGGGTACAGCATGCTATGGTaGGGATGGACAGAAGGCAGTCTATTCTTCTCTAGCTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: IAFLKPWERGYSMLW*GWTEGSLFFSSCSA
Trigger: AGCTGAGCAGCTAGAGAAGAATAGACTGCCTTCTGTCCATCCTCACCATAGCATGCTGTACCCTCTTTCCCATGGCTTCAGGAAGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp GGCTTGTACTGCTCCTTCCATGTCACCTGCTGCTACCAAGGCTGCTaGCAGGTTAATATAACCATCAATGAAATCAGGCTTCAGCCGCAA +
Preference number: 5 (lower is better)
Translates to: GLYCSFHVTCCYQGC*QVNITINEIRLQPQ
Trigger: TTGCGGCTGAAGCCTGATTTCATTGATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp GTACAAATCAGGATTGTACTGAAGAGCAGAGACATAGGCTTGTACTaGTCCTTCCATGTCACCTGCTGCTACCAAGGCTGCTGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VQIRIVLKSRDIGLY*SFHVTCCYQGCCQV
Trigger: AACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTCTCTGCTCTTCAGTACAATCCTGATTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAGTCGATAATGCTCGATaGCTTCCTGCAACTGCCCTC +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGVDNAR*LPATAL
Trigger: GAGGGCAGTTGCAGGAAGCAATCGAGCATTATCGAC...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTATCGGGGAAATGGGGTaGCAGTTCGATAGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTIGEMG*QFDSSP
Trigger: AGGAGAGCTATCGAACTGCAACCCCATTTCCCCGAT...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAACACTGCCCTTCTCTTaGAGAGCATTTGCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRTLPFS*RAFARL
Trigger: CAACCTAGCAAATGCTCTCAAAGAGAAGGGCAGTGT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAAGTGCTTCCTGCAGCTaGCCCTGCTGTTGCAGTACA +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKSASCS*PCCCST
Trigger: TGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCACT...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp TGTCTGCTTTTAGCAATGAGCTCGAGACATCCTAGACAAGTAAGCTaGGAAGCTGCAACTCGAGAGGCAAGAGTCTCTCCTGGCATAGTC +
Preference number: 5 (lower is better)
Translates to: CLLLAMSSRHPRQVS*EAATREARVSPGIV
Trigger: GACTATGCCAGGAGAGACTCTTGCCTCTCGAGTTGCAGCTTCTCAGCTTACTTGTCTAGGATGTCTCGAGCTCATTGCTAAAAGCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp ATAGGCTTGTACTGCTCCTTCCATGTCACCTGCTGCTACCAAGGCTaGTGCCAGGTTAATATAACCATCAATGAAATCAGGCTTCAGCCG +
Preference number: 5 (lower is better)
Translates to: IGLYCSFHVTCCYQG*CQVNITINEIRLQP
Trigger: CGGCTGAAGCCTGATTTCATTGATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp GTGCTTCCTGCAGCTTGCCCTGCTGTTGCAGTACACTTGCTAAATTaGAATGTGCAGCAGCAAACTCTGGGAAGACTTCTAATGCTTTGC +
Preference number: 5 (lower is better)
Translates to: VLPAACPAVAVHLLN*NVQQQTLGRLLMLC
Trigger: GCAAAGCATTAGAAGTCTTCCCAGAGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAGTATTGTCAGGCTCTaGTCTCCAGAGCTGCATGCA +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGSIVRL*SPELHA
Trigger: TGCATGCAGCTCTGGAGACAAGAGCCTGACAATACT...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAGCAGAGACATAGGCTaGTACTGCTCCTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGSRDIG*YCSFHV
Trigger: GACATGGAAGGAGCAGTACAAGCCTATGTCTCTGCT...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTACTGCCTCTTCAATGTaGCCCTGTTCCCGTTTGATG +
Preference number: 5 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTTASSM*PCSRLM
Trigger: CATCAAACGGGAACAGGGCAACATTGAAGAGGCAGT...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGACTCTGTTTCCAGACTTaGCCACGAATTTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRLCFQT*PRIFFR
Trigger: CCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGAG...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp CTGAAGAGCAGAGACATAGGCTTGTACTGCTCCTTCCATGTCACCTaGTGCTACCAAGGCTGCTGCCAGGTTAATATAACCATCAATGAA +
Preference number: 5 (lower is better)
Translates to: LKSRDIGLYCSFHVT*CYQGCCQVNITINE
Trigger: TTCATTGATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTCTCTGCTCTTCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAAACTGCCCTCTTTCCTaGTACACATTTCCCAAATTC +
Preference number: 5 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRNCPLS*YTFPKF
Trigger: GAATTTGGGAAATGTGTACAAGGAAAGAGGGCAGTT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAACTGCCTCTTCAATGTaGCCCTGTTCCCGTTTGATG +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKTASSM*PCSRLM
Trigger: CATCAAACGGGAACAGGGCAACATTGAAGAGGCAGT...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GGAGACCAGACCTTCCAGACCTGTGCACCACCTGTTTGCTGCAAAACTCTAAGAAGTACACTTGCTAAATaGGAATGTGCAGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: GDQTFQTCAPPVCCKTLRSTLAK*ECAAAN
Trigger: GTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACT...TCTTAGAGTTTTGCAGCAAACAGGTGGTGCACAGGTCTGGAAGGTCTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGATGCGGTAAGAAGCTATaGCTTCTGGGATATTCCCTG +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGCGKKL*LLGYSL
Trigger: CAGGGAATATCCCAGAAGCAATAGCTTCTTACCGCA...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCGATGTGAATTCCATCTaGGTGGATGCGGTCGGCTGC +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPDVNSI*VDAVGC
Trigger: GCAGCCGACCGCATCCACCAAGATGGAATTCACATC...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp ATAAAAGAACACCAGTATTGTCAGGCTCTTGTCTCCAGAGCTGCATaGAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTGATATTCTC +
Preference number: 5 (lower is better)
Translates to: IKEHQYCQALVSRAA*SVSQLPQNLLPDIL
Trigger: GAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCTGACAATACTGGTGTTCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp AAGAGCAGAGACATAGGCTTGTACTGCTCCTTCCATGTCACCTGCTaGTACCAAGGCTGCTGCCAGGTTAATATAACCATCAATGAAATC +
Preference number: 5 (lower is better)
Translates to: KSRDIGLYCSFHVTC*YQGCCQVNITINEI
Trigger: GATTTCATTGATGGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTCTCTGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp ATGAAGGACATTAATCTTATCCAAGCAGAGATTCCCATGCCTCTCTaGAATAGCCTTCCTGAAGCCATGGGAAAGAGGGTACAGCATGCT +
Preference number: 5 (lower is better)
Translates to: MKDINLIQAEIPMPL*NSLPEAMGKRVQHA
Trigger: AGCATGCTGTACCCTCTTTCCCATGGCTTCAGGAAGGCTATTGCAGAGAGGCATGGGAATCTCTGCTTGGATAAGATTAATGTCCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCGTCGATAATGCTCGATaGCTTCCTGCAACTGCCCTC +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPVDNAR*LPATAL
Trigger: GAGGGCAGTTGCAGGAAGCAATCGAGCATTATCGAC...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTAGTGCTTCCTGCAGCTaGCCCTGCTGTTGCAGTACA +
Preference number: 5 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPSASCS*PCCCST
Trigger: TGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCACT...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTTACTGCTGTCTGGATaGTCACCTCCATCAGGACAT +
Preference number: 5 (lower is better)
Translates to: RLDQSTASQNGWLISISPLLLSG*SPPSGH
Trigger: ATGTCCTGATGGAGGTGACAATCCAGACAGCAGTAA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGTAGTCGCCAGTCCATaGCTAATACTGAATCCGTTA +
Preference number: 5 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTVVASP*LILNPL
Trigger: TAACGGATTCAGTATTAGCAATGGACTGGCGACTAC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp TCCCGAAGTCAGAACTCACATAGCCTACACGCAATCGGCCATCACTaGGCTTCAAGTCTTTTGGATGTTCATATGGTGGTTTATGAAGGA +
Preference number: 5 (lower is better)
Translates to: SRSQNSHSLHAIGHH*ASSLLDVHMVVYEG
Trigger: TCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGCGTGTAGGCTATGTGAGTTCTGACTTCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp TCATTCCGAGCACCCTTGGTATACCCATTCATATTCACAAGGATGTaGATTCCATCTTGGTGGATGCGGTCGGCTGCTTTTCCATTACAA +
Preference number: 5 (lower is better)
Translates to: SFRAPLVYPFIFTRM*IPSWWMRSAAFPLQ
Trigger: TTGTAATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAATTCACATCCTTGTGAATATGAATGGGTATACCAAGGGTGCTCGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp GGGCATATAAGCCAGTTTCTCAGAATACTGCTCTGCAACTTCAGCTaGGGAAGTTTCCTGATCAGTGATGATGTAATCCATGAACAGTGC +
Preference number: 5 (lower is better)
Translates to: GHISQFLRILLCNFS*GSFLISDDVIHEQC
Trigger: GCACTGTTCATGGATTACATCATCACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAGAAACTGGCTTATATGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp GCCCATATTTTGTGCATATTGTTGAATATTGGGTTCTCCTACTGCTaGAAAACGCAACAGCCAAAGCACGCTGTTAGGCACACGTTTCAG +
Preference number: 5 (lower is better)
Translates to: AHILCILLNIGFSYC*KTQQPKHAVRHTFQ
Trigger: CTGAAACGTGTGCCTAACAGCGTGCTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAATATTCAACAATATGCACAAAATATGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTAGTATTGTCAGGCTCTaGTCTCCAGAGCTGCATGCA +
Preference number: 5 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCSIVRL*SPELHA
Trigger: TGCATGCAGCTCTGGAGACAAGAGCCTGACAATACT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTAGCAGAGACATAGGCTaGTACTGCTCCTTCCATGTC +
Preference number: 5 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCSRDIG*YCSFHV
Trigger: GACATGGAAGGAGCAGTACAAGCCTATGTCTCTGCT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp TATGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAAAGGCTACTGCAAAGTTaGGTTGCGTCTCAATTGCTT +
Preference number: 5 (lower is better)
Translates to: YVNGHRSQPQRHSKSIIQRLLQS*VASQLL
Trigger: AAGCAATTGAGACGCAACCAAACTTTGCAGTAGCCT...TTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTAGGCTACTGCAAAGTTaGGTTGCGTCTCAATTGCTT +
Preference number: 5 (lower is better)
Translates to: RLDQSTASQNGWLISISPRLLQS*VASQLL
Trigger: AAGCAATTGAGACGCAACCAAACTTTGCAGTAGCCT...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAATCTCCCCTTGTGCATaGAAAACACAGCCGAGATTA +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKISPCA*KTQPRL
Trigger: TAATCTCGGCTGTGTTTTCAATGCACAAGGGGAGAT...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGCTGTTGCAGTACACTaGCTAAATTGGAATGTGCAG +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKAVAVH*LNWNVQ
Trigger: CTGCACATTCCAATTTAGCAAGTGTACTGCAACAGC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGACTATCGAGAAATGCTTaGAGATCGATGCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGLSRNA*RSMPFR
Trigger: TCTGAATGGCATCGATCTCAAAGCATTTCTCGATAG...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTTCAGGACATTTCATCTaGACAATCTTCACATCGGGT +
Preference number: 5 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTSGHFI*TIFTSG
Trigger: ACCCGATGTGAAGATTGTCAAGATGAAATGTCCTGA...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGAAAGACTTCCATTGTGTATTGTTaGGTGTTGAACAGAGGGCTA +
Preference number: 5 (lower is better)
Translates to: GNSCNYRIGALPRCFGKTSIVYC*VLNRGL
Trigger: TAGCCCTCTGTTCAACACCAAACAATACACAATGGA...AGTCTTTCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS TCA 90 bp AAACTTATCAGGATTATGCATGCCTGGAATAGACTGCATAAGGTGTaGAGTAGGGTGATTCCCGAAGTCAGAACTCACATAGCCTACACG +
Preference number: 5 (lower is better)
Translates to: KLIRIMHAWNRLHKV*SRVIPEVRTHIAYT
Trigger: CGTGTAGGCTATGTGAGTTCTGACTTCGGGAATCACCCTACTTCACACCTTATGCAGTCTATTCCAGGCATGCATAATCCTGATAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp GTTGCCCTGTTCCCGTTTGATGTTGGCAAGGTTATTCAAAGAGTCTaGATGAGTAGGACACAGACGAAGAGCTGTGTTATAACAATCTTC +
Preference number: 5 (lower is better)
Translates to: VALFPFDVGKVIQRV*MSRTQTKSCVITIF
Trigger: GAAGATTGTTATAACACAGCTCTTCGTCTGTGTCCTACTCATGCAGACTCTTTGAATAACCTTGCCAACATCAAACGGGAACAGGGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp AAGGCCCATATTTTGTGCATATTGTTGAATATTGGGTTCTCCTACTaGTGGAAAACGCAACAGCCAAAGCACGCTGTTAGGCACACGTTT +
Preference number: 5 (lower is better)
Translates to: KAHILCILLNIGFSY*WKTQQPKHAVRHTF
Trigger: AAACGTGTGCCTAACAGCGTGCTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAATATTCAACAATATGCACAAAATATGGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCAAAGCATACGTTTCGTaGGTTCTGTACTGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPKAYVS*VLYCRP
Trigger: TGGCCGACAGTACAGAACCAACGAAACGTATGCTTT...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAAACTGCCCTCTTTCCTaGTACACATTTCCCAAATTC +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKNCPLS*YTFPKF
Trigger: GAATTTGGGAAATGTGTACAAGGAAAGAGGGCAGTT...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATTCAGGCAATAGCTGCAACTACAGAATAGGTGCACTGCCTAGGTGCTTTGGATACTGCAAAGTTTGGTaGCGTCTCAATTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: HSGNSCNYRIGALPRCFGYCKVW*RLNCFQ
Trigger: TTGAAAGCAATTGAGACGCAACCAAACTTTGCAGTA...TCCAAAGCACCTAGGCAGTGCACCTATTCTGTAGTTGCAGCTATTGCCTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTACACTGCCCTTCTCTTaGAGAGCATTTGCTAGGTTG +
Preference number: 5 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCTLPFS*RAFARL
Trigger: CAACCTAGCAAATGCTCTCAAAGAGAAGGGCAGTGT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCAAGACTTCTAATGCTTaGCGATACAGGCGAACTGCC +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPKTSNA*RYRRTA
Trigger: GGCAGTTCGCCTGTATCGCAAAGCATTAGAAGTCTT...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp TATGTAAATGGCCACAGATCTCAGCCTCAGCGGCACTCCAAGTCTATTATCCAAAGTACACTTGCTAAATaGGAATGTGCAGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: YVNGHRSQPQRHSKSIIQSTLAK*ECAAAN
Trigger: GTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACT...TTGGATAATAGACTTGGAGTGCCGCTGAGGCTGAGATCTGTGGCCATTTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGCGGTAAGAAGCTATaGCTTCTGGGATATTCCCTG +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPCGKKL*LLGYSL
Trigger: CAGGGAATATCCCAGAAGCAATAGCTTCTTACCGCA...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp TGCATTGAAAACACAGCCGAGATTACTCCAGGCTACTGCAAAGTTTaGTTGCGTCTCAATTGCTTTCAAATAACATGCCTTGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CIENTAEITPGYCKV*LRLNCFQITCLGFF
Trigger: GAAGAAGCCAAGGCATGTTATTTGAAAGCAATTGAGACGCAACCAAACTTTGCAGTAGCCTGGAGTAATCTCGGCTGTGTTTTCAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTTTGGTTGCGTCTCAATaGCTTTCAAATAACATGCCT +
Preference number: 5 (lower is better)
Translates to: RLDQSTASQNGWLISISPLVASQ*LSNNMP
Trigger: AGGCATGTTATTTGAAAGCAATTGAGACGCAACCAA...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAATACTGCAAAGTTTGGTaGCGTCTCAATTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKYCKVW*RLNCFQ
Trigger: TTGAAAGCAATTGAGACGCAACCAAACTTTGCAGTA...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTATCTCCCCTTGTGCATaGAAAACACAGCCGAGATTA +
Preference number: 5 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCISPCA*KTQPRL
Trigger: TAATCTCGGCTGTGTTTTCAATGCACAAGGGGAGAT...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAGACTTCTAATGCTTaGCGATACAGGCGAACTGCC +
Preference number: 5 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTKTSNA*RYRRTA
Trigger: GGCAGTTCGCCTGTATCGCAAAGCATTAGAAGTCTT...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCGCTGTTGCAGTACACTaGCTAAATTGGAATGTGCAG +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPAVAVH*LNWNVQ
Trigger: CTGCACATTCCAATTTAGCAAGTGTACTGCAACAGC...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTTCATTCCGAGCACCCTaGGTATACCCATTCATATTC +
Preference number: 5 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCSFRAP*VYPFIF
Trigger: GAATATGAATGGGTATACCAAGGGTGCTCGGAATGA...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTTACTGCTGTCTGGATaGTCACCTCCATCAGGACAT +
Preference number: 5 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPLLLSG*SPPSGH
Trigger: ATGTCCTGATGGAGGTGACAATCCAGACAGCAGTAA...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACAGGGAAGGCCCATATTTaGTGCATATTGTTGAATATT +
Preference number: 5 (lower is better)
Translates to: PIKRLHQQGPCHPVRVQTGKAHI*CILLNI
Trigger: AATATTCAACAATATGCACAAAATATGGGCCTTCCC...TGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AGACTTGATCAATCCACGGCATCACAAAACGGCTGGTTAATCTCTATCTCCCCTGTGTATTGTTTGGTGTaGAACAGAGGGCTAGATATT +
Preference number: 5 (lower is better)
Translates to: RLDQSTASQNGWLISISPVYCLV*NRGLDI
Trigger: AATATCTAGCCCTCTGTTCAACACCAAACAATACAC...AGGGGAGATAGAGATTAACCAGCCGTTTTGTGATGCCGTGGATTGATCAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp AAAGAAAGTATGGGGCATATAAGCCAGTTTCTCAGAATACTGCTCTaGAACTTCAGCTGGGGAAGTTTCCTGATCAGTGATGATGTAATC +
Preference number: 5 (lower is better)
Translates to: KESMGHISQFLRILL*NFSWGSFLISDDVI
Trigger: GATTACATCATCACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAGAAACTGGCTTATATGCCCCATACTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp ACGCAATCGGCCATCACTGAGCTTCAAGTCTTTTGGATGTTCATATaGTGGTTTATGAAGGACATTAATCTTATCCAAGCAGAGATTCCC +
Preference number: 5 (lower is better)
Translates to: TQSAITELQVFWMFI*WFMKDINLIQAEIP
Trigger: GGGAATCTCTGCTTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp TTAAGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTTCATTCCGAGCACCCTaGGTATACCCATTCATATTC +
Preference number: 5 (lower is better)
Translates to: LSHHLNKALTVPSIRSDTSFRAP*VYPFIF
Trigger: GAATATGAATGGGTATACCAAGGGTGCTCGGAATGA...AGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAGTAGTCGCCAGTCCATaGCTAATACTGAATCCGTTA +
Preference number: 5 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKVVASP*LILNPL
Trigger: TAACGGATTCAGTATTAGCAATGGACTGGCGACTAC...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp AAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTCAGAGTTCAGACACTAAAGGGAAGGCCCATATTTaGTGCATATTGTTGAATATT +
Preference number: 5 (lower is better)
Translates to: KKTTPARSLSPCQSSDTKGKAHI*CILLNI
Trigger: AATATTCAACAATATGCACAAAATATGGGCCTTCCC...TTTAGTGTCTGAACTCTGACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp GGTCTTCCACAGATAGGTTACCTGGAAATAAAAGCCTGTTACAATAAGCAAAGCCTCTGTTTCCAGACTTaGCCACGAATTTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GLPQIGYLEIKACYNKQSLCFQT*PRIFFR
Trigger: CCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGAG...GCTTTGCTTATTGTAACAGGCTTTTATTTCCAGGTAACCTATCTGTGGAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS-3UTR CAA 90 bp GTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTGTTCCATTGTGTATTGTTaGGTGTTGAACAGAGGGCTA +
Preference number: 5 (lower is better)
Translates to: VVYKTYKKTTPARSLSPCSIVYC*VLNRGL
Trigger: TAGCCCTCTGTTCAACACCAAACAATACACAATGGA...ACAGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp CCATCACTGAGCTTCAAGTCTTTTGGATGTTCATATGGTGGTTTATaGAGGACATTAATCTTATCCAAGCAGAGATTCCCATGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: PSLSFKSFGCSYGGL*RTLILSKQRFPCLS
Trigger: AGAGAGGCATGGGAATCTCTGCTTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp TATACCCATTCATATTCACAAGGATGTGAATTCCATCTTGGTGGATaGGGTCGGCTGCTTTTCCATTACAAGGAATCTGAGAAAGATCAA +
Preference number: 5 (lower is better)
Translates to: YTHSYSQGCEFHLGG*GRLLFHYKESEKDQ
Trigger: TTGATCTTTCTCAGATTCCTTGTAATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAATTCACATCCTTGTGAATATGAATGGGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp CAATCGGCCATCACTGAGCTTCAAGTCTTTTGGATGTTCATATGGTaGTTTATGAAGGACATTAATCTTATCCAAGCAGAGATTCCCATG +
Preference number: 5 (lower is better)
Translates to: QSAITELQVFWMFIW*FMKDINLIQAEIPM
Trigger: CATGGGAATCTCTGCTTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 90 bp CACATAGCCTACACGCAATCGGCCATCACTGAGCTTCAAGTCTTTTaGATGTTCATATGGTGGTTTATGAAGGACATTAATCTTATCCAA +
Preference number: 5 (lower is better)
Translates to: HIAYTQSAITELQVF*MFIWWFMKDINLIQ
Trigger: TTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGCGTGTAGGCTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp CATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTGGTTGCGTCTCAATaGCTTTCAAATAACATGCCT +
Preference number: 5 (lower is better)
Translates to: HVVYKTYKKTTPARSLSPLVASQ*LSNNMP
Trigger: AGGCATGTTATTTGAAAGCAATTGAGACGCAACCAA...GGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTCTATCGAGAAATGCTTaGAGATCGATGCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPLSRNA*RSMPFR
Trigger: TCTGAATGGCATCGATCTCAAAGCATTTCTCGATAG...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp ATGTGGTTTATAAAACCTATAAAAAGACTACACCAGCAAGGTCCCTGTCACCCTTCAGGACATTTCATCTaGACAATCTTCACATCGGGT +
Preference number: 5 (lower is better)
Translates to: MWFIKPIKRLHQQGPCHPSGHFI*TIFTSG
Trigger: ACCCGATGTGAAGATTGTCAAGATGAAATGTCCTGA...AGGGTGACAGGGACCTTGCTGGTGTAGTCTTTTTATAGGTTTTATAAACCACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS-3UTR CAA 90 bp AGTCATCATCTAAACAAAGCACTGACAGTGCCAAGCATTAGGTCAGACACTAAAGTGTATTGTTTGGTGTaGAACAGAGGGCTAGATATT +
Preference number: 5 (lower is better)
Translates to: SHHLNKALTVPSIRSDTKVYCLV*NRGLDI
Trigger: AATATCTAGCCCTCTGTTCAACACCAAACAATACAC...TTTAGTGTCTGACCTAATGCTTGGCACTGTCAGTGCTTTGTTTAGATGATGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS TCA 90 bp GTAGTCGCCAGTCCATTGCTAATACTGAATCCGTTAATTGTTATCTaGATCTGCCCTCTGTTAATCATTTCAATTACTGCTTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: VVASPLLILNPLIVI*ICPLLIISITASAI
Trigger: GATTGCAGAAGCAGTAATTGAAATGATTAACAGAGGGCAGATTCAGATAACAATTAACGGATTCAGTATTAGCAATGGACTGGCGACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 90 bp ATATTTGCCCACATCTGCAGGGTAGATGGGTCAATTTTATATAACTaGTTAAAGTTACAGTACACAATGGCATCTTCTGGTAGCCCATAC +
Preference number: 5 (lower is better)
Translates to: IFAHICRVDGSILYN*LKLQYTMASSGSPY
Trigger: GTATGGGCTACCAGAAGATGCCATTGTGTACTGTAACTTTAATCAGTTATATAAAATTGACCCATCTACCCTGCAGATGTGGGCAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp TGTTATCTGAATCTGCCCTCTGTTAATCATTTCAATTACTGCTTCTaGAATCGTATTCATGGGAATAACGGGCATATTAAGAGCTGTGTT +
Preference number: 5 (lower is better)
Translates to: CYLNLPSVNHFNYCF*NRIHGNNGHIKSCV
Trigger: AACACAGCTCTTAATATGCCCGTTATTCCCATGAATACGATTGCAGAAGCAGTAATTGAAATGATTAACAGAGGGCAGATTCAGATAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 90 bp GTTAATTGTTATCTGAATCTGCCCTCTGTTAATCATTTCAATTACTaGTTCTGCAATCGTATTCATGGGAATAACGGGCATATTAAGAGC +
Preference number: 5 (lower is better)
Translates to: VNCYLNLPSVNHFNY*FCNRIHGNNGHIKS
Trigger: GCTCTTAATATGCCCGTTATTCCCATGAATACGATTGCAGAAGCAGTAATTGAAATGATTAACAGAGGGCAGATTCAGATAACAATTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp AACATGCCTTGGCTTCTTCCAAGCGACCCAGGGCTTTaGGCAGGTTCCCCAGGTCACTGCGAACACAGTACA +
Preference number: 6 (lower is better)
Translates to: NMPWLLPSDPGL*AGSPGHCEHST
Trigger: TGTACTGTGTTCGCAGTGACCTGGGGAACCTGCTCAAAGCCCTGGGTCGCTTGGAAGAAGCCAAGGCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp GCTCGTAGTACACACAAGCCAGGTTGCCGTGCACCACCGCATGATTaGGGCTCAAACTTAAGGCACGAAGATAAGCTGCGACAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: ARSTHKPGCRAPPHD*GSNLRHEDKLRQLC
Trigger: ACAGAGCTGTCGCAGCTTATCTTCGTGCCTTAAGTTTGAGCCCAAATCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGTACTACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp CACCAGTATTGTCAGGCTCTTGTCTCCAGAGCTGCATaGAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: HQYCQALVSRAA*SVSQLPQNLLP
Trigger: AGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCTGACAATACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AAGAGTCTCTCCTGGCATAGTCACCATGGGTGTTCCTaGCCAGAGAACATCCATCCCTGTGGTGTGTCCATT +
Preference number: 6 (lower is better)
Translates to: KSLSWHSHHGCS*PENIHPCGVSI
Trigger: AATGGACACACCACAGGGATGGATGTTCTCTGGGCAGGAACACCCATGGTGACTATGCCAGGAGAGACTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp ACACACAAGCCAGGTTGCCGTGCACCACCGCATGATTaGGGCTCAAACTTAAGGCACGAAGATAAGCTGCGA +
Preference number: 6 (lower is better)
Translates to: THKPGCRAPPHD*GSNLRHEDKLR
Trigger: TCGCAGCTTATCTTCGTGCCTTAAGTTTGAGCCCAAATCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp CTATTAGGCCTTGCTCGTAGTACACACAAGCCAGGTTaGCGTGCACCACCGCATGATTTGGGCTCAAACTTA +
Preference number: 6 (lower is better)
Translates to: LLGLARSTHKPG*RAPPHDLGSNL
Trigger: TAAGTTTGAGCCCAAATCATGCGGTGGTGCACGGCAACCTGGCTTGTGTGTACTACGAGCAAGGCCTAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AGTTTCCTGATCAGTGATGATGTAATCCATGAACAGTaGACCACTAGTCCCAGGGTAGCCCAGCCACATGGC +
Preference number: 6 (lower is better)
Translates to: SFLISDDVIHEQ*TTSPRVAQPHG
Trigger: GCCATGTGGCTGGGCTACCCTGGGACTAGTGGTGCACTGTTCATGGATTACATCATCACTGATCAGGAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp GTGCTTCCTGCAGCTTGCCCTGCTGTTGCAGTACACTaGCTAAATTGGAATGTGCAGCAGCAAACTCTGGGA +
Preference number: 6 (lower is better)
Translates to: VLPAACPAVAVH*LNWNVQQQTLG
Trigger: TCCCAGAGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp ATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTTGG +
Preference number: 6 (lower is better)
Translates to: MQCLSAASKSPA*YSRCANSANPW
Trigger: CCAAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044475.5
CDS TCA 72 bp CTGAAGCCATGGGAAAGAGGGTACAGCATGCTATGGTaGGGATGGACAGAAGGCAGTCTATTCTTCTCTAGC +
Preference number: 6 (lower is better)
Translates to: LKPWERGYSMLW*GWTEGSLFFSS
Trigger: GCTAGAGAAGAATAGACTGCCTTCTGTCCATCCTCACCATAGCATGCTGTACCCTCTTTCCCATGGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp ACCTCTCCTGACATGCTCCTCTTTAGGAGCCACAGGTaGGAAAATGATACGGTTCTGGGGAAGGCCCATATT +
Preference number: 6 (lower is better)
Translates to: TSPDMLLFRSHR*ENDTVLGKAHI
Trigger: AATATGGGCCTTCCCCAGAACCGTATCATTTTCTCACCTGTGGCTCCTAAAGAGGAGCATGTCAGGAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AGAACACCAGTATTGTCAGGCTCTTGTCTCCAGAGCTaGATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCT +
Preference number: 6 (lower is better)
Translates to: RTPVLSGSCLQS*MQCLSAASKSP
Trigger: AGGAGATTTTGAGGCAGCTGAGAGACACTGCATGCAGCTCTGGAGACAAGAGCCTGACAATACTGGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AGAGACATAGGCTTGTACTGCTCCTTCCATGTCACCTaGTGCTACCAAGGCTGCTGCCAGGTTAATATAACC +
Preference number: 6 (lower is better)
Translates to: RDIGLYCSFHVT*CYQGCCQVNIT
Trigger: GGTTATATTAACCTGGCAGCAGCCTTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTCTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp AGTGCATCAGTGCTTCCTGCAGCTTGCCCTGCTGTTGCAGTACACTaGCTAAATTGGAATGTGCAGCAGCAAACTCTGGGAAGACTTCTA +
Preference number: 6 (lower is better)
Translates to: SASVLPAACPAVAVH*LNWNVQQQTLGRLL
Trigger: TAGAAGTCTTCCCAGAGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCACTGATGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp GGCGAACTGCCTCTTCAATGTTGCCCTGTTCCCGTTTaGTGTTGGCAAGGTTATTCAAAGAGTCTGCATGAG +
Preference number: 6 (lower is better)
Translates to: GELPLQCCPVPV*CWQGYSKSLHE
Trigger: CTCATGCAGACTCTTTGAATAACCTTGCCAACATCAAACGGGAACAGGGCAACATTGAAGAGGCAGTTCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp ATGCAGTGTCTCTCAGCTGCCTCAAAATCTCCTGCCTaGTATTCTCGATGTGCCAACTCAGCTAACCCTGTA +
Preference number: 6 (lower is better)
Translates to: MQCLSAASKSPA*YSRCANSANPV
Trigger: TACAGGGTTAGCTGAGTTGGCACATCGAGAATATCAGGCAGGAGATTTTGAGGCAGCTGAGAGACACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119299.8
CDS CCA 72 bp GCAGCTTGCCCTGCTGTTGCAGTACACTTGCTAAATTaGAATGTGCAGCAGCAAACTCTGGGAAGACTTCTA +
Preference number: 6 (lower is better)
Translates to: AACPAVAVHLLN*NVQQQTLGRLL
Trigger: TAGAAGTCTTCCCAGAGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACTGCAACAGCAGGGCAAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp AGTGCTTCCTGCAGCTTGCCCTGCTGTTGCAGTACACTTGCTAAATaGGAATGTGCAGCAGCAAACTCTGGGAAGACTTCTAATGCTTTG +
Preference number: 6 (lower is better)
Translates to: SASCSLPCCCSTLAK*ECAAANSGKTSNAL
Trigger: CAAAGCATTAGAAGTCTTCCCAGAGTTTGCTGCTGCACATTCCAATTTAGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AGGACTAATTCGTATGGCTTCTTTATAGTGCATCAGTaGTTCCTGCAGCTTGCCCTGCTGTTGCAGTACACT +
Preference number: 6 (lower is better)
Translates to: RTNSYGFFIVHQ*FLQLALLLQYT
Trigger: AGTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCACTGATGCACTATAAAGAAGCCATACGAATTAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp GGTTACAATAATGGTACGGGGAACTTCCTCTCCGGTTaGAGCCTTATTATTAATCTGTGTAGTCGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: GYNNGTGNFLSG*SLIINLCSRQS
Trigger: GGACTGGCGACTACACAGATTAATAATAAGGCTGCAACCGGAGAGGAAGTTCCCCGTACCATTATTGTAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AACAGGCTTAATCATGTGGTCAGGTTTGTTGCCAGCTaGATAATGCTCCCACATCTGCAGATAAAGTCGCTC +
Preference number: 6 (lower is better)
Translates to: NRLNHVVRFVAS*IMLPHLQIKSL
Trigger: GAGCGACTTTATCTGCAGATGTGGGAGCATTATGCAGCTGGCAACAAACCTGACCACATGATTAAGCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 72 bp TTACAGTACACAATGGCATCTTCTGGTAGCCCATACTaGGAACGGGTGGTTACAATAATGGTACGGGGAACT +
Preference number: 6 (lower is better)
Translates to: LQYTMASSGSPY*ERVVTIMVRGT
Trigger: AGTTCCCCGTACCATTATTGTAACCACCCGTTCCCAGTATGGGCTACCAGAAGATGCCATTGTGTACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp CAAATCAGGATTGTACTGAAGAGCAGAGACATAGGCTaGTACTGCTCCTTCCATGTCACCTGCTGCTACCAA +
Preference number: 6 (lower is better)
Translates to: QIRIVLKSRDIG*YCSFHVTCCYQ
Trigger: TTGGTAGCAGCAGGTGACATGGAAGGAGCAGTACAAGCCTATGTCTCTGCTCTTCAGTACAATCCTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp AATGCTTTGCGATACAGGCGAACTGCCTCTTCAATGTaGCCCTGTTCCCGTTTGATGTTGGCAAGGTTATTC +
Preference number: 6 (lower is better)
Translates to: NALRYRRTASSM*PCSRLMLARLF
Trigger: GAATAACCTTGCCAACATCAAACGGGAACAGGGCAACATTGAAGAGGCAGTTCGCCTGTATCGCAAAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp AATGATTGGCTTCCGCCATCACCTTCACTCGAAAGTTaGTACCATCATCCGGGCTCAAGGCATAGCAGAATA +
Preference number: 6 (lower is better)
Translates to: NDWLPPSPSLES*YHHPGSRHSRI
Trigger: TATTCTGCTATGCCTTGAGCCCGGATGATGGTACAAACTTTCGAGTGAAGGTGATGGCGGAAGCCAATCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp CAGAACTCACATAGCCTACACGCAATCGGCCATCACTaGGCTTCAAGTCTTTTGGATGTTCATATGGTGGTT +
Preference number: 6 (lower is better)
Translates to: QNSHSLHAIGHH*ASSLLDVHMVV
Trigger: AACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGCCGATTGCGTGTAGGCTATGTGAGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp TTCAAAGTGATGAATAGCCAGCCAAATCTCCCCTTGTaGATTGAAAACACAGCCGAGATTACTCCAGGCTAC +
Preference number: 6 (lower is better)
Translates to: FKVMNSQPNLPL*IENTAEITPGY
Trigger: GTAGCCTGGAGTAATCTCGGCTGTGTTTTCAATGCACAAGGGGAGATTTGGCTGGCTATTCATCACTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp TGGCTTCTTTATAGTGCATCAGTGCTTCCTGCAGCTTaGCCTGCTGTTGCAGTACACTTGCTAAATTGGAAT +
Preference number: 6 (lower is better)
Translates to: WLLYSASVLPAA*PAVAVHLLNWN
Trigger: ATTCCAATTTAGCAAGTGTACTGCAACAGCAGGGCAAGCTGCAGGAAGCACTGATGCACTATAAAGAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp ATTAATCTTATCCAAGCAGAGATTCCCATGCCTCTCTaGAATAGCCTTCCTGAAGCCATGGGAAAGAGGGTA +
Preference number: 6 (lower is better)
Translates to: INLIQAEIPMPL*NSLPEAMGKRV
Trigger: TACCCTCTTTCCCATGGCTTCAGGAAGGCTATTGCAGAGAGGCATGGGAATCTCTGCTTGGATAAGATTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp ATGGGGCATATAAGCCAGTTTCTCAGAATACTGCTCTaGAACTTCAGCTGGGGAAGTTTCCTGATCAGTGAT +
Preference number: 6 (lower is better)
Translates to: MGHISQFLRILL*NFSWGSFLISD
Trigger: ATCACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAGAAACTGGCTTATATGCCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 72 bp TTGTGCATATTGTTGAATATTGGGTTCTCCTACTGCTaGAAAACGCAACAGCCAAAGCACGCTGTTAGGCAC +
Preference number: 6 (lower is better)
Translates to: LCILLNIGFSYC*KTQQPKHAVRH
Trigger: GTGCCTAACAGCGTGCTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAATATTCAACAATATGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp AAGACTTCTAATGCTTTGCGATACAGGCGAACTGCCTCTTCAATGTaGCCCTGTTCCCGTTTGATGTTGGCAAGGTTATTCAAAGAGTCT +
Preference number: 6 (lower is better)
Translates to: KTSNALRYRRTASSM*PCSRLMLARLFKES
Trigger: AGACTCTTTGAATAACCTTGCCAACATCAAACGGGAACAGGGCAACATTGAAGAGGCAGTTCGCCTGTATCGCAAAGCATTAGAAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp ACCCTTGGTATACCCATTCATATTCACAAGGATGTGAATTCCATCTaGGTGGATGCGGTCGGCTGCTTTTCCATTACAAGGAATCTGAGA +
Preference number: 6 (lower is better)
Translates to: TLGIPIHIHKDVNSI*VDAVGCFSITRNLR
Trigger: TCTCAGATTCCTTGTAATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAATTCACATCCTTGTGAATATGAATGGGTATACCAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp AGGATTATGCATGCCTGGAATAGACTGCATAAGGTGTaGAGTAGGGTGATTCCCGAAGTCAGAACTCACATA +
Preference number: 6 (lower is better)
Translates to: RIMHAWNRLHKV*SRVIPEVRTHI
Trigger: TATGTGAGTTCTGACTTCGGGAATCACCCTACTTCACACCTTATGCAGTCTATTCCAGGCATGCATAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp TCATATTCACAAGGATGTGAATTCCATCTTGGTGGATaGGGTCGGCTGCTTTTCCATTACAAGGAATCTGAG +
Preference number: 6 (lower is better)
Translates to: SYSQGCEFHLGG*GRLLFHYKESE
Trigger: CTCAGATTCCTTGTAATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAATTCACATCCTTGTGAATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 72 bp AGCCAGTTTCTCAGAATACTGCTCTGCAACTTCAGCTaGGGAAGTTTCCTGATCAGTGATGATGTAATCCAT +
Preference number: 6 (lower is better)
Translates to: SQFLRILLCNFS*GSFLISDDVIH
Trigger: ATGGATTACATCATCACTGATCAGGAAACTTCCCCAGCTGAAGTTGCAGAGCAGTATTCTGAGAAACTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp ATACCCATTCATATTCACAAGGATGTGAATTCCATCTaGGTGGATGCGGTCGGCTGCTTTTCCATTACAAGG +
Preference number: 6 (lower is better)
Translates to: IPIHIHKDVNSI*VDAVGCFSITR
Trigger: CCTTGTAATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAATTCACATCCTTGTGAATATGAATGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp CTGTCTGGATTGTCACCTCCATCAGGACATTTCATCTaGACAATCTTCACATCGGGTAGGCTATCGAGAAAT +
Preference number: 6 (lower is better)
Translates to: LSGLSPPSGHFI*TIFTSGRLSRN
Trigger: ATTTCTCGATAGCCTACCCGATGTGAAGATTGTCAAGATGAAATGTCCTGATGGAGGTGACAATCCAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp ATGGGAATAACGGGCATATTAAGAGCTGTGTTACTGCTGTCTGGATaGTCACCTCCATCAGGACATTTCATCTTGACAATCTTCACATCG +
Preference number: 6 (lower is better)
Translates to: MGITGILRAVLLLSG*SPPSGHFILTIFTS
Trigger: CGATGTGAAGATTGTCAAGATGAAATGTCCTGATGGAGGTGACAATCCAGACAGCAGTAACACAGCTCTTAATATGCCCGTTATTCCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp TTCCCGTTTGATGTTGGCAAGGTTATTCAAAGAGTCTaGATGAGTAGGACACAGACGAAGAGCTGTGTTATA +
Preference number: 6 (lower is better)
Translates to: FPFDVGKVIQRV*MSRTQTKSCVI
Trigger: TATAACACAGCTCTTCGTCTGTGTCCTACTCATGCAGACTCTTTGAATAACCTTGCCAACATCAAACGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp AAGGATGTGAATTCCATCTTGGTGGATGCGGTCGGCTaGTTTTCCATTACAAGGAATCTGAGAAAGATCAAT +
Preference number: 6 (lower is better)
Translates to: KDVNSILVDAVG*FSITRNLRKIN
Trigger: ATTGATCTTTCTCAGATTCCTTGTAATGGAAAAGCAGCCGACCGCATCCACCAAGATGGAATTCACATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS GCA 72 bp ATTTTGTGCATATTGTTGAATATTGGGTTCTCCTACTaGTGGAAAACGCAACAGCCAAAGCACGCTGTTAGG +
Preference number: 6 (lower is better)
Translates to: ILCILLNIGFSY*WKTQQPKHAVR
Trigger: CCTAACAGCGTGCTTTGGCTGTTGCGTTTTCCAGCAGTAGGAGAACCCAATATTCAACAATATGCACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp ATTGAAAACACAGCCGAGATTACTCCAGGCTACTGCAAAGTTTGGTaGCGTCTCAATTGCTTTCAAATAACATGCCTTGGCTTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: IENTAEITPGYCKVW*RLNCFQITCLGFFQ
Trigger: TTGGAAGAAGCCAAGGCATGTTATTTGAAAGCAATTGAGACGCAACCAAACTTTGCAGTAGCCTGGAGTAATCTCGGCTGTGTTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 90 bp TGTTTGGTGTTGAACAGAGGGCTAGATATTCTCTGTTTCCAGACTTaGCCACGAATTTTCTTCAGGTATTCTAGATCGGTTCCCAGTTTC +
Preference number: 6 (lower is better)
Translates to: CLVLNRGLDILCFQT*PRIFFRYSRSVPSF
Trigger: GAAACTGGGAACCGATCTAGAATACCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGAGAATATCTAGCCCTCTGTTCAACACCAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp CAATCTTCACATCGGGTAGGCTATCGAGAAATGCTTTaGGATCGATGCCATTCAGAACTATCCGATTATCAT +
Preference number: 6 (lower is better)
Translates to: QSSHRVGYREML*DRCHSELSDYH
Trigger: ATGATAATCGGATAGTTCTGAATGGCATCGATCTCAAAGCATTTCTCGATAGCCTACCCGATGTGAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp ACAATCTTCACATCGGGTAGGCTATCGAGAAATGCTTaGAGATCGATGCCATTCAGAACTATCCGATTATCA +
Preference number: 6 (lower is better)
Translates to: TIFTSGRLSRNA*RSMPFRTIRLS
Trigger: TGATAATCGGATAGTTCTGAATGGCATCGATCTCAAAGCATTTCTCGATAGCCTACCCGATGTGAAGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp AAGTGTATAGATGAAAGTAATAAAAGAACACCAGTATaGTCAGGCTCTTGTCTCCAGAGCTGCATGCAGTGT +
Preference number: 6 (lower is better)
Translates to: KCIDESNKRTPV*SGSCLQSCMQC
Trigger: ACACTGCATGCAGCTCTGGAGACAAGAGCCTGACAATACTGGTGTTCTTTTATTACTTTCATCTATACACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CAA 72 bp TTGAACAGAGGGCTAGATATTCTCTGTTTCCAGACTTaGCCACGAATTTTCTTCAGGTATTCTAGATCGGTT +
Preference number: 6 (lower is better)
Translates to: LNRGLDILCFQT*PRIFFRYSRSV
Trigger: AACCGATCTAGAATACCTGAAGAAAATTCGTGGCAAAGTCTGGAAACAGAGAATATCTAGCCCTCTGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 72 bp GCCATCACTGAGCTTCAAGTCTTTTGGATGTTCATATaGTGGTTTATGAAGGACATTAATCTTATCCAAGCA +
Preference number: 6 (lower is better)
Translates to: AITELQVFWMFI*WFMKDINLIQA
Trigger: TGCTTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS TCA 72 bp AGCTTCAAGTCTTTTGGATGTTCATATGGTGGTTTATaGAGGACATTAATCTTATCCAAGCAGAGATTCCCA +
Preference number: 6 (lower is better)
Translates to: SFKSFGCSYGGL*RTLILSKQRFP
Trigger: TGGGAATCTCTGCTTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8
CDS CCA 72 bp ATCACTGAGCTTCAAGTCTTTTGGATGTTCATATGGTaGTTTATGAAGGACATTAATCTTATCCAAGCAGAG +
Preference number: 6 (lower is better)
Translates to: ITELQVFWMFIW*FMKDINLIQAE
Trigger: CTCTGCTTGGATAAGATTAATGTCCTTCATAAACCACCATATGAACATCCAAAAGACTTGAAGCTCAGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044475.5
ENSMUST00000119299.8