Pregenerated sensors for OGG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030271Ensembl transcript IDs: ENSMUST00000032406.15, ENSMUST00000136263.4, ENSMUST00000204834.3
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAAGCAGATGCAGTCAGCCACCTTGGCGCCCACCCCGGGCAGGGTaGAGAGGGCCTTGTGGGCCTCTTCATAAGGGGCCACTCGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LSRCSQPPWRPPRAG*RGPCGPLHKGPLEA Trigger: AGCTTCGAGTGGCCCCTTATGAAGAGGCCCACAAGGCCCTCTGCACCCTGCCCGGGGTGGGCGCCAAGGTGGCTGACTGCATCTGCTTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | GCTGCTGCAGCCAAGCTGGCCCACCTTGCTCTTCGAGGATGGCTTTaGCACTGGCACGTACATAGCGGGCACGGTACCCCAGGCCCAACT | + |
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Preference number: 1 (lower is better) Translates to: AAAAKLAHLALRGWL*HWHVHSGHGTPGPT Trigger: AGTTGGGCCTGGGGTACCGTGCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | CTCGAAGCTGCTGCAGCCAAGCTGGCCCACCTTGCTCTTCGAGGATaGCTTTGGCACTGGCACGTACATAGCGGGCACGGTACCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: LEAAAAKLAHLALRG*LWHWHVHSGHGTPG Trigger: GCCTGGGGTACCGTGCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | GTGGGCCTCTTCATAAGGGGCCACTCGAAGCTGCTGCAGCCAAGCTaGCCCACCTTGCTCTTCGAGGATGGCTTTGGCACTGGCACGTAC | + |
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Preference number: 1 (lower is better) Translates to: VGLFIRGHSKLLQPS*PTLLFEDGFGTGTY Trigger: GTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGCCCCTTATGAAGAGGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | GATCCCTTTTTGCGCTTTGCTGGTGGCTCCCGAGACAGGCTTGGTTaGCGAAGGTCAGCACTGAACAGCACTGCTTGGGCCCAGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: DPFLRFAGGSRDRLG*RRSALNSTAWAQPA Trigger: TGCTGGCTGGGCCCAAGCAGTGCTGTTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | CTTAGATCCCTTTTTGCGCTTTGCTGGTGGCTCCCGAGACAGGCTTaGTTGGCGAAGGTCAGCACTGAACAGCACTGCTTGGGCCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LRSLFALCWWLPRQA*LAKVSTEQHCLGPA Trigger: GGCTGGGCCCAAGCAGTGCTGTTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGATCTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | CCCTACCTAGCCCTCTGGCCTCTTAGATCCCTTTTTGCGCTTTGCTaGTGGCTCCCGAGACAGGCTTGGTTGGCGAAGGTCAGCACTGAA | + |
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Preference number: 1 (lower is better) Translates to: PYLALWPLRSLFALC*WLPRQAWLAKVSTE Trigger: TTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGATCTAAGAGGCCAGAGGGCTAGGTAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | TACCTAGCCCTCTGGCCTCTTAGATCCCTTTTTGCGCTTTGCTGGTaGCTCCCGAGACAGGCTTGGTTGGCGAAGGTCAGCACTGAACAG | + |
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Preference number: 1 (lower is better) Translates to: YLALWPLRSLFALCW*LPRQAWLAKVSTEQ Trigger: CTGTTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGATCTAAGAGGCCAGAGGGCTAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 90 bp | TCACGATGGGCAATCTGCCATACATGGACATCCACGGGCACAGCCTaGGGTTTGTCAAGGGCCATTAAGCAGATGCAGTCAGCCACCTTG | + |
|
Preference number: 1 (lower is better) Translates to: SRWAICHTWTSTGTA*GLSRAIKQMQSATL Trigger: CAAGGTGGCTGACTGCATCTGCTTAATGGCCCTTGACAAACCCCAGGCTGTGCCCGTGGATGTCCATGTATGGCAGATTGCCCATCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CAA 90 bp | TTCATAAGGGGCCACTCGAAGCTGCTGCAGCCAAGCTGGCCCACCTaGCTCTTCGAGGATGGCTTTGGCACTGGCACGTACATAGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: FIRGHSKLLQPSWPT*LFEDGFGTGTYIAG Trigger: GCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGCCCCTTATGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CAA 90 bp | TGGGCAATCTGCCATACATGGACATCCACGGGCACAGCCTGGGGTTaGTCAAGGGCCATTAAGCAGATGCAGTCAGCCACCTTGGCGCCC | + |
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Preference number: 2 (lower is better) Translates to: WAICHTWTSTGTAWG*SRAIKQMQSATLAP Trigger: GGGCGCCAAGGTGGCTGACTGCATCTGCTTAATGGCCCTTGACAAACCCCAGGCTGTGCCCGTGGATGTCCATGTATGGCAGATTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGGCCACTCGAAGCTGCTaGAGCCAAGCTGGCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: CLGPASIRSPQIPEKVSQATRSC*SQAGPP Trigger: AGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGC...CTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGCTGCTGCAGCCAAGCTaGCCCACCTTGCTCTTCGAG | + |
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Preference number: 2 (lower is better) Translates to: CLGPASIRSPQIPEKVSQLLQPS*PTLLFE Trigger: CTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAG...CTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGTGAGTCTCTGCTTCTaGACCAGCCAGGGCATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LLGPSQHKVPTDSGKSFPVSLCF*TSQGME Trigger: CTCCATGCCCTGGCTGGTCCAGAAGCAGAGACTCAC...TGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCACCCAACTTCCTCAGGTaGGTCTCTGCTTCTGGACCA | + |
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Preference number: 2 (lower is better) Translates to: LLGPSQHKVPTDSGKSFPPNFLR*VSASGP Trigger: TGGTCCAGAAGCAGAGACTCACCTGAGGAAGTTGGG...TGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCGTAGTCACGATGGGCAATCTGCCATACATGGACATCCACGGGCACAGAGAAAAGGCACTCAGTaGGGTCTTGTCTCAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: ASRSHDGQSAIHGHPRAQRKGTQ*GLVSAV Trigger: GACTGCTGAGACAAGACCCCACTGAGTGCCTTTTCT...CTGTGCCCGTGGATGTCCATGTATGGCAGATTGCCCATCGTGACTACGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136263.4 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAGCCGTAGTCACGATGGGCAATCTGCCATACATGGACATCCACGGGCACCTTGCTCTTCGAGGATaGCTTTGGCACTGGCACGTA | + |
|
Preference number: 2 (lower is better) Translates to: MPAVVTMGNLPYMDIHGHLALRG*LWHWHV Trigger: TACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAG...GTGCCCGTGGATGTCCATGTATGGCAGATTGCCCATCGTGACTACGGCTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CCA 90 bp | GCACTGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCTTCGAGGATGGCTTTaGCACTGGCACGTACATAGC | + |
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Preference number: 2 (lower is better) Translates to: ALLGPSQHKVPTDSGKSFLRGWL*HWHVHS Trigger: GCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAG...GAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGTTCTTGCAATCTGCCATACATaGACATCCACGGGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: GPSQHKVPTDSGKSFPVLAICHT*TSTGTA Trigger: GGCTGTGCCCGTGGATGTCCATGTATGGCAGATTGC...AAGAACTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CAA 90 bp | ATGCCAGCCGTAGTCACGATGGGCAATCTGCCATACATGGACATCCACGGGCACATGCAGTCAGCCACCTaGGCGCCCACCCCGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPAVVTMGNLPYMDIHGHMQSAT*APTPGR Trigger: CCTGCCCGGGGTGGGCGCCAAGGTGGCTGACTGCAT...GTGCCCGTGGATGTCCATGTATGGCAGATTGCCCATCGTGACTACGGCTGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | GCCAAGCTGGCCCACCTTGCTCTTCGAGGATGGCTTTaGCACTGGCACGTACATAGCGGGCACGGTACCCCA | + |
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Preference number: 3 (lower is better) Translates to: AKLAHLALRGWL*HWHVHSGHGTP Trigger: TGGGGTACCGTGCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | GCTGCAGCCAAGCTGGCCCACCTTGCTCTTCGAGGATaGCTTTGGCACTGGCACGTACATAGCGGGCACGGT | + |
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Preference number: 3 (lower is better) Translates to: AAAKLAHLALRG*LWHWHVHSGHG Trigger: ACCGTGCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR TCA 72 bp | GCTCCCGAGACAGGCTTGGTTGGCGAAGGTCAGCACTaGACAGCACTGCTTGGGCCCAGCCAGCATAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: APETGLVGEGQH*TALLGPSQHKV Trigger: GACCTTATGCTGGCTGGGCCCAAGCAGTGCTGTTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR GCA 72 bp | GCCACTCGAAGCTGCTGCAGCCAAGCTGGCCCACCTTaGTCTTCGAGGATGGCTTTGGCACTGGCACGTACA | + |
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Preference number: 3 (lower is better) Translates to: ATRSCCSQAGPP*SSRMALALART Trigger: TGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR GCA 72 bp | ACGGTACCCCAGGCCCAACTTCCTCAGGTGAGTCTCTaGTTCTGGACCAGCCAGGGCATGGAGGTTTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: TVPQAQLPQVSL*FWTSQGMEVWE Trigger: TTCCCAAACCTCCATGCCCTGGCTGGTCCAGAAGCAGAGACTCACCTGAGGAAGTTGGGCCTGGGGTACCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | GCACTCAGTGGGGTCTTGTCTCAGCAGTCTCACACCTaGAGAGCAGAAAGGTCGGAGCCTGGGGACACACCT | + |
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Preference number: 3 (lower is better) Translates to: ALSGVLSQQSHT*RAERSEPGDTP Trigger: AGGTGTGTCCCCAGGCTCCGACCTTTCTGCTCTCCAGGTGTGAGACTGCTGAGACAAGACCCCACTGAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136263.4 |
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| 3UTR CCA 72 bp | GCCCTCTGGCCTCTTAGATCCCTTTTTGCGCTTTGCTaGTGGCTCCCGAGACAGGCTTGGTTGGCGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: ALWPLRSLFALC*WLPRQAWLAKV Trigger: GACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGATCTAAGAGGCCAGAGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | TTCATAAGGGGCCACTCGAAGCTGCTGCAGCCAAGCTaGCCCACCTTGCTCTTCGAGGATGGCTTTGGCACT | + |
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Preference number: 3 (lower is better) Translates to: FIRGHSKLLQPS*PTLLFEDGFGT Trigger: AGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGCCCCTTATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | CTCTGGCCTCTTAGATCCCTTTTTGCGCTTTGCTGGTaGCTCCCGAGACAGGCTTGGTTGGCGAAGGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: LWPLRSLFALCW*LPRQAWLAKVS Trigger: GCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGATCTAAGAGGCCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR-3UTR CAA 90 bp | AGTTCTTTGTTGGCCAAAGGGCTCGGGCCCTTAGCCTGGGATGTCTTAGGATGCGGCACAGCCTGGGGTTaGTCAAGGGCCATTAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SSLLAKGLGPLAWDVLGCGTAWG*SRAIKQ Trigger: CTGCTTAATGGCCCTTGACAAACCCCAGGCTGTGCC...GCATCCTAAGACATCCCAGGCTAAGGGCCCGAGCCCTTTGGCCAACAAAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | CTTTTTGCGCTTTGCTGGTGGCTCCCGAGACAGGCTTaGTTGGCGAAGGTCAGCACTGAACAGCACTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LFALCWWLPRQA*LAKVSTEQHCL Trigger: CAAGCAGTGCTGTTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | GCAATCTGCCATACATGGACATCCACGGGCACAGCCTaGGGTTTGTCAAGGGCCATTAAGCAGATGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: AICHTWTSTGTA*GLSRAIKQMQS Trigger: TGACTGCATCTGCTTAATGGCCCTTGACAAACCCCAGGCTGTGCCCGTGGATGTCCATGTATGGCAGATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| 3UTR CCA 72 bp | AGTCTCTGCTTCTGGACCAGCCAGGGCATGGAGGTTTaGGAAGCCATGATAAGTGACATCATCAAGCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: SLCFWTSQGMEV*EAMISDIIKLN Trigger: ATTCAGCTTGATGATGTCACTTATCATGGCTTCCCAAACCTCCATGCCCTGGCTGGTCCAGAAGCAGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136263.4 |
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| CDS-3UTR CCA 90 bp | TGGCACTGGCACGTACATAGCGGGCACGGTACCCCAGGCCCAACTTCCTCAGGTGTGGGCCTGCTGACCTaGCTGTCGTCTCCTCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: WHWHVHSGHGTPGPTSSGVGLLT*LSSPRY Trigger: GTACCGAGGAGACGACAGCCAGGTCAGCAGGCCCAC...ACCTGAGGAAGTTGGGCCTGGGGTACCGTGCCCGCTATGTACGTGCCAGTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR GCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCCACCCCGGGCAGGGTaGAGAGGGCCTTGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGPPRAG*RGPCGP Trigger: AGGCCCACAAGGCCCTCTGCACCCTGCCCGGGGTGG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| 3UTR CAA 72 bp | GGCCACTCGAAGCTGCTGCAGCCAAGCTGGCCCACCTaGCTCTTCGAGGATGGCTTTGGCACTGGCACGTAC | + |
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Preference number: 4 (lower is better) Translates to: GHSKLLQPSWPT*LFEDGFGTGTY Trigger: GTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR CCA 90 bp | CCCCGGGCAGGGTGCAGAGGGCCTTGTGGGCCTCTTCATAAGGGGCCACTCGAAGCCACTCTTTGGAAGTaGGAGTCTACAGAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PRAGCRGPCGPLHKGPLEATLWK*ESTEAQ Trigger: CTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGC...TTCGAGTGGCCCCTTATGAAGAGGCCCACAAGGCCCTCTGCACCCTGCCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR TCA 90 bp | ACTGAACAGCACTGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAGCACGCCACTCCAGTaGGCAGGGCTCTGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TEQHCLGPASIRSPQIPESTPLQ*AGLCSF Trigger: GAAGGAGCAGAGCCCTGCTCACTGGAGTGGCGTGCT...TTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCAGTGCTGTTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR TCA 90 bp | TGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGAGCACGCCACTCCAGTaGGCAGGGCTCTGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CLGPASIRSPQIPEKVSQSTPLQ*AGLCSF Trigger: GAAGGAGCAGAGCCCTGCTCACTGGAGTGGCGTGCT...CTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR GCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGGCCACTCGAAGCTGCTaGAGCCAAGCTGGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGATRSC*SQAGPP Trigger: AGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGC...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | TGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGGTGGGCCTGCTGACCTaGCTGTCGTCTCCTCGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CLGPASIRSPQIPEKVSQVGLLT*LSSPRY Trigger: GTACCGAGGAGACGACAGCCAGGTCAGCAGGCCCAC...CTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR CCA 90 bp | TGGCACTGGCACGTACATAGCGGGCACGGTACCCCAGGCCCAACTTCCTCAGGTGCCACTCTTTGGAAGTaGGAGTCTACAGAAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: WHWHVHSGHGTPGPTSSGATLWK*ESTEAQ Trigger: CTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGC...ACCTGAGGAAGTTGGGCCTGGGGTACCGTGCCCGCTATGTACGTGCCAGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR GCA 90 bp | CTTGCTCTTCGAGGATGGCTTTGGCACTGGCACGTACATAGCGGGCACGGTACCCTCCTCGGTACACAGTaGAATAGAGCTGGTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: LALRGWLWHWHVHSGHGTLLGTQ*NRAGPP Trigger: CGGAGGACCAGCTCTATTGCACTGTGTACCGAGGAG...GGTACCGTGCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR CCA 90 bp | TGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGACGCAGCTCAGAGCGTaGACACGGGATAGAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: CLGPASIRSPQIPEKVSQTQLRA*TRDRGP Trigger: TGGGCCTCTATCCCGTGTCCACGCTCTGAGCTGCGT...CTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCGAGGTCCAAAGGCCTaGCAGAGCCGTTCCACCATG | + |
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Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGRGPKA*QSRSTM Trigger: CATGGTGGAACGGCTCTGCCAGGCCTTTGGACCTCG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCTGCTGCAGCCAAGCTaGCCCACCTTGCTCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGLLQPS*PTLLFE Trigger: CTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGCCGTAGTCACGATGGGCAATCTGCCATACATGGACATCCACGGGCACGTCAGTGTCCATACTTaGTCTGCCAGCACGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: MPAVVTMGNLPYMDIHGHVSVHT*SASTPL Trigger: GAGTGGCGTGCTGGCAGATCAAGTATGGACACTGAC...GTGCCCGTGGATGTCCATGTATGGCAGATTGCCCATCGTGACTACGGCTGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGCTGGCCCACCTTGCTCTTCGAGGATGGCTTTGGCACTGGCACGTACATGTCCATACTTGATCTaGCAGCACGCCACTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQAGPPCSSRMALALARTCPYLI*QHATPV Trigger: CACTGGAGTGGCGTGCTGGCAGATCAAGTATGGACA...TGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGTCCACGGGCACAGCCTaGGGTTTGTCAAGGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGSTGTA*GLSRAI Trigger: AATGGCCCTTGACAAACCCCAGGCTGTGCCCGTGGA...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCTCGGGCCCTTAGCCTaGGATGTCTTAGGATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGLGPLA*DVLGCQ Trigger: CTGGCATCCTAAGACATCCCAGGCTAAGGGCCCGAG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| 3UTR CAA 72 bp | TGCCATACATGGACATCCACGGGCACAGCCTGGGGTTaGTCAAGGGCCATTAAGCAGATGCAGTCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CHTWTSTGTAWG*SRAIKQMQSAT Trigger: GGTGGCTGACTGCATCTGCTTAATGGCCCTTGACAAACCCCAGGCTGTGCCCGTGGATGTCCATGTATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCCCAACTTCCTCAGGTaGGTCTCTGCTTCTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGPNFLR*VSASGP Trigger: TGGTCCAGAAGCAGAGACTCACCTGAGGAAGTTGGG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGAGCACTGAACAGCACTaGTTGGGCCCAGCCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGSTEQH*LGPASI Trigger: TATGCTGGCTGGGCCCAAGCAGTGCTGTTCAGTGCT...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGCTGGCCCACCTTGCTCTTCGAGGATGGCTTTGGCACTGGCACGTACAGAGGTCCAAAGGCCTTaGAATTTCTGGGCCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQAGPPCSSRMALALARTEVQRP*NFWATL Trigger: AAGAGTGGCCCAGAAATTCCAAGGCCTTTGGACCTC...TGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204834.3 |
||
| 3UTR CAA 72 bp | CCCCACAGATTCCGGAAAAAGTTTCCCAGTTCTTTGTaGGCCAAAGGGCTCGGGCCCTTAGCCTGGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHRFRKKFPSSL*AKGLGPLAWDV Trigger: GACATCCCAGGCTAAGGGCCCGAGCCCTTTGGCCAACAAAGAACTGGGAAACTTTTTCCGGAATCTGTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| 3UTR CAA 72 bp | GGTCCCCACAGATTCCGGAAAAAGTTTCCCAGTTCTTaGTTGGCCAAAGGGCTCGGGCCCTTAGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPHRFRKKFPSS*LAKGLGPLAWD Trigger: ATCCCAGGCTAAGGGCCCGAGCCCTTTGGCCAACAAAGAACTGGGAAACTTTTTCCGGAATCTGTGGGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR GCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGTGTCCATACTTGATCTaGCAGCACGCCACTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGCPYLI*QHATPV Trigger: CACTGGAGTGGCGTGCTGGCAGATCAAGTATGGACA...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
||
| CDS-3UTR GCA 90 bp | CAGCACTGCTTGGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTGTCCATACTTGATCTaGCAGCACGCCACTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QHCLGPASIRSPQIPEKVCPYLI*QHATPV Trigger: CACTGGAGTGGCGTGCTGGCAGATCAAGTATGGACA...AACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCCAAGCAGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGGCCACTCTTTGGAAGTaGGAGTCTACAGAAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGATLWK*ESTEAQ Trigger: CTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGC...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCTTCGAGGATGGCTTTaGCACTGGCACGTACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGLRGWL*HWHVHS Trigger: GCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGCATCATCAAGCTGAATaGGTCGAGGTCCAAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGHHQAE*VEVQRP Trigger: AGGCCTTTGGACCTCGACTCATTCAGCTTGATGATG...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR CCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGAGAAAAGGCACTCAGTaGGGTCTTGTCTCAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGRKGTQ*GLVSAV Trigger: GACTGCTGAGACAAGACCCCACTGAGTGCCTTTTCT...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR TCA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGGTGACATCATCAAGCTaGATGAGTCGAGGTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGVTSSS*MSRGPK Trigger: CTTTGGACCTCGACTCATTCAGCTTGATGATGTCAC...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR CCA 90 bp | GGGCCCAGCCAGCATAAGGTCCCCACAGATTCCGGAAAAAGTTTCCCAGTTCTTTTCTGGGCCACTCTTTaGAAGTGGGAGTCTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPSQHKVPTDSGKSFPVLFWATL*KWESTE Trigger: TTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAA...AAGAACTGGGAAACTTTTTCCGGAATCTGTGGGGACCTTATGCTGGCTGGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCGTGGGCCTGCTGACCTaGCTGTCGTCTCCTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPVGLLT*LSSPRY Trigger: GTACCGAGGAGACGACAGCCAGGTCAGCAGGCCCAC...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCACGCAGCTCAGAGCGTaGACACGGGATAGAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPTQLRA*TRDRGP Trigger: TGGGCCTCTATCCCGTGTCCACGCTCTGAGCTGCGT...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
||
| CDS-3UTR TCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTAGCACGCCACTCCAGTaGGCAGGGCTCTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLSTPLQ*AGLCSF Trigger: GAAGGAGCAGAGCCCTGCTCACTGGAGTGGCGTGCT...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
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| CDS-3UTR TCA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCGTCAGTGTCCATACTTaGTCTGCCAGCACGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPVSVHT*SASTPL Trigger: GAGTGGCGTGCTGGCAGATCAAGTATGGACACTGAC...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
||
| CDS-3UTR CCA 90 bp | GTTTGGGAAGCCATGATAAGTGACATCATCAAGCTGAATGAGTCGAGGTCCAAATTCTGGGCCACTCTTTaGAAGTGGGAGTCTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VWEAMISDIIKLNESRSKFWATL*KWESTE Trigger: TTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAA...TTTGGACCTCGACTCATTCAGCTTGATGATGTCACTTATCATGGCTTCCCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136263.4 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCGCAATCTGCCATACATaGACATCCACGGGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPAICHT*TSTGTA Trigger: GGCTGTGCCCGTGGATGTCCATGTATGGCAGATTGC...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTGTGAGTCTCTGCTTCTaGACCAGCCAGGGCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLVSLCF*TSQGME Trigger: CTCCATGCCCTGGCTGGTCCAGAAGCAGAGACTCAC...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCCTTGCTCTTCGAGGATaGCTTTGGCACTGGCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPLALRG*LWHWHV Trigger: TACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAG...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTGCGCTTTGCTGGTaGCTCCCGAGACAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLFALCW*LPRQAW Trigger: CCAAGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAA...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR GCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTCTCCTCGGTACACAGTaGAATAGAGCTGGTCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLLLGTQ*NRAGPP Trigger: CGGAGGACCAGCTCTATTGCACTGTGTACCGAGGAG...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
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| CDS-3UTR CCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTCGAGACAGGCTTGGTTaGCGAAGGTCAGCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLRDRLG*RRSALN Trigger: GTTCAGTGCTGACCTTCGCCAACCAAGCCTGTCTCG...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTCTTTTTGCGCTTTGCTaGTGGCTCCCGAGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLLFALC*WLPRQA Trigger: AGCCTGTCTCGGGAGCCACCAGCAAAGCGCAAAAAG...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCTTCTGGGCCACTCTTTaGAAGTGGGAGTCTACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPFWATL*KWESTE Trigger: TTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAA...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
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| CDS-3UTR GCA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTCACGATGGGCAATCTaGCATACATGGACATCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLSRWAI*HTWTST Trigger: CGTGGATGTCCATGTATGGCAGATTGCCCATCGTGA...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CAA 90 bp | CTTTGGCACTGGCACGTACATAGCGGGCACGGTACCCCAGGCCCAACTTCCTCAGGCTCCAGGGGGACCTaGGAATTTCTGGGCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWHWHVHSGHGTPGPTSSGSRGT*EFLGHS Trigger: AGAGTGGCCCAGAAATTCCAAGGTCCCCCTGGAGCC...TGAGGAAGTTGGGCCTGGGGTACCGTGCCCGCTATGTACGTGCCAGTGCCAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136263.4 |
||
| CDS-3UTR CAA 90 bp | AGGGGCCACTCGAAGCTGCTGCAGCCAAGCTGGCCCACCTTGCTCTTCGAGGATCGAGGTCCAAAGGCCTaGGAATTTCTGGGCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGHSKLLQPSWPTLLFEDRGPKA*EFLGHS Trigger: AGAGTGGCCCAGAAATTCCAAGGCCTTTGGACCTCG...ATCCTCGAAGAGCAAGGTGGGCCAGCTTGGCTGCAGCAGCTTCGAGTGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204834.3 |
||
| CDS-3UTR CAA 90 bp | GGGCCTTGTGGGCCTCTTCATAAGGGGCCACTCGAAGCTGCTGCAGCCAAGCTGAGTCAGTGTCCATACTaGATCTGCCAGCACGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GPCGPLHKGPLEAAAAKLSQCPY*ICQHAT Trigger: AGTGGCGTGCTGGCAGATCAAGTATGGACACTGACT...CAGCTTGGCTGCAGCAGCTTCGAGTGGCCCCTTATGAAGAGGCCCACAAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR CAA 90 bp | CACCTTGCTCTTCGAGGATGGCTTTGGCACTGGCACGTACATAGCGGGCACGGTAGTCAGTGTCCATACTaGATCTGCCAGCACGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: HLALRGWLWHWHVHSGHGSQCPY*ICQHAT Trigger: AGTGGCGTGCTGGCAGATCAAGTATGGACACTGACT...ACCGTGCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR CAA 90 bp | TGGCCCACCTTGCTCTTCGAGGATGGCTTTGGCACTGGCACGTACATAGCGGGCTTTCTGGGCCACTCTTaGGAAGTGGGAGTCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WPTLLFEDGFGTGTYIAGFLGHS*EVGVYR Trigger: TCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAA...GCCCGCTATGTACGTGCCAGTGCCAAAGCCATCCTCGAAGAGCAAGGTGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGACTGAACAGCACTGCTaGGGCCCAGCCAGCATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGTEQHC*GPASIR Trigger: CCTTATGCTGGCTGGGCCCAAGCAGTGCTGTTCAGT...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS TCA 90 bp | GAAAGTACTTGTGTAGGGTTTCCAGCTCCTCTAGGGTGGGCCTGCTaGCCTGGCTGTCGTCTCCTCGGTACACAGTGCAATAGAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESTCVGFPAPLGWAC*PGCRLLGTQCNRAG Trigger: ACCAGCTCTATTGCACTGTGTACCGAGGAGACGACAGCCAGGTCAGCAGGCCCACCCTAGAGGAGCTGGAAACCCTACACAAGTACTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 ENSMUST00000204834.3 |
||
| CDS CCA 90 bp | GTCGAGGTCCAAAGGCCTTGGAATTTCTGGGCCACTCTTTGGAAGTaGGAGTCTACAGAAGCCCAGTGGCTATACAGCTGTGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VEVQRPWNFWATLWK*ESTEAQWLYSCARL Trigger: CAGCCTGGCACAGCTGTATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGCCTTTGGACCTCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204834.3 |
||
| CDS-3UTR CAA 90 bp | GAGGTGGGAGTGTTAAGTCTTTCTGACTTGAGACTTAGGGGTCGGGGGTTGGGGATCCCTTTTTGCGCTTaGCTGGTGGCTCCCGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EVGVLSLSDLRLRGRGLGIPFCA*LVAPET Trigger: TGTCTCGGGAGCCACCAGCAAAGCGCAAAAAGGGAT...CCCCAACCCCCGACCCCTAAGTCTCAAGTCAGAAAGACTTAACACTCCCACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS CCA 90 bp | CTCAGCAGTCTCACACCTTGGAATTTCTGGGCCACTCTTTGGAAGTaGGAGTCTACAGAAGCCCAGTGGCTATACAGCTGTGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSLTPWNFWATLWK*ESTEAQWLYSCARL Trigger: CAGCCTGGCACAGCTGTATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGTGTGAGACTGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS CCA 90 bp | TCTTGTCTCAGCAGTCTCACACCTTGGAATTTCTGGGCCACTCTTTaGAAGTGGGAGTCTACAGAAGCCCAGTGGCTATACAGCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCLSSLTPWNFWATL*KWESTEAQWLYSCA Trigger: GGCACAGCTGTATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGTGTGAGACTGCTGAGACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR CAA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCATGCAGTCAGCCACCTaGGCGCCCACCCCGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPMQSAT*APTPGR Trigger: CCTGCCCGGGGTGGGCGCCAAGGTGGCTGACTGCAT...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
||
| CDS-3UTR CAA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCGGCACAGCCTGGGGTTaGTCAAGGGCCATTAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPGTAWG*SRAIKQ Trigger: CTGCTTAATGGCCCTTGACAAACCCCAGGCTGTGCC...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCAAGTTTCCCAGTTCTTaGTTGGCCAAAGGGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPKFPSS*LAKGLG Trigger: CCCGAGCCCTTTGGCCAACAAAGAACTGGGAAACTT...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCTTTCTGGGCCACTCTTaGGAAGTGGGAGTCTACAGA | + |
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Preference number: 5 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPFLGHS*EVGVYR Trigger: TCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAA...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
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| CDS-3UTR CAA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTAGTCAGTGTCCATACTaGATCTGCCAGCACGCCACT | + |
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Preference number: 5 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLSQCPY*ICQHAT Trigger: AGTGGCGTGCTGGCAGATCAAGTATGGACACTGACT...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 |
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| CDS-3UTR CAA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTCAGCAGTCTCACACCTaGGAATTTCTGGGCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLQQSHT*EFLGHS Trigger: AGAGTGGCCCAGAAATTCCAAGGTGTGAGACTGCTG...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CAA 90 bp | TGTAATAAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTCTCTTAGATCCCTTTTaGCGCTTTGCTGGTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CNKGKIKQDSSVCSNSFLLLDPF*RFAGGS Trigger: GGAGCCACCAGCAAAGCGCAAAAAGGGATCTAAGAG...AAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTTATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCGTAATGCGAGCAATGTaGTTGTTGGAGGAACAGATG | + |
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Preference number: 5 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPVMRAM*LLEEQM Trigger: CATCTGTTCCTCCAACAACAACATTGCTCGCATTAC...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGATAAAACAAGACAGTTCCGTTTGCTCAAATAGCTTCCTTTTTCCCATGCGAGCAATGTTGTaGTTGGAGGAACAGATGAAA | + |
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Preference number: 5 (lower is better) Translates to: KGKIKQDSSVCSNSFLFPMRAML*LEEQMK Trigger: TTTCATCTGTTCCTCCAACAACAACATTGCTCGCAT...GGGAAAAAGGAAGCTATTTGAGCAAACGGAACTGTCTTGTTTTATCTTCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS CAA 72 bp | ATAGAGCTGGTCCTCCGTCTGAGTCAGTGTCCATACTaGATCTGCCAGCACGCCACTCCAGTGAGCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IELVLRLSQCPY*ICQHATPVSRA Trigger: AGCCCTGCTCACTGGAGTGGCGTGCTGGCAGATCAAGTATGGACACTGACTCAGACGGAGGACCAGCTCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032406.15 ENSMUST00000136263.4 ENSMUST00000204834.3 |
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| CDS CCA 72 bp | GAGGTCCAAAGGCCTTGGAATTTCTGGGCCACTCTTTaGAAGTGGGAGTCTACAGAAGCCCAGTGGCTATAC | + |
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Preference number: 6 (lower is better) Translates to: EVQRPWNFWATL*KWESTEAQWLY Trigger: GTATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGCCTTTGGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204834.3 |
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| CDS CAA 90 bp | GTCTTGTCTCAGCAGTCTCACACCTTGGAATTTCTGGGCCACTCTTaGGAAGTGGGAGTCTACAGAAGCCCAGTGGCTATACAGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: VLSQQSHTLEFLGHS*EVGVYRSPVAIQLC Trigger: GCACAGCTGTATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGTGTGAGACTGCTGAGACAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS CCA 72 bp | AGCAGTCTCACACCTTGGAATTTCTGGGCCACTCTTTaGAAGTGGGAGTCTACAGAAGCCCAGTGGCTATAC | + |
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Preference number: 6 (lower is better) Translates to: SSLTPWNFWATL*KWESTEAQWLY Trigger: GTATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGTGTGAGACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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| CDS CAA 72 bp | CAGCAGTCTCACACCTTGGAATTTCTGGGCCACTCTTaGGAAGTGGGAGTCTACAGAAGCCCAGTGGCTATA | + |
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Preference number: 6 (lower is better) Translates to: QQSHTLEFLGHS*EVGVYRSPVAI Trigger: TATAGCCACTGGGCTTCTGTAGACTCCCACTTCCAAAGAGTGGCCCAGAAATTCCAAGGTGTGAGACTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032406.15 |
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