Pregenerated sensors for OGFRL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026158Ensembl transcript IDs: ENSMUST00000027343.6, ENSMUST00000188677.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCGTGTGGAGGCTGAGAGAGATGGTGATGCCCAGGCAAGCAGAGTaGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: LVWRLREMVMPRQAE*GRRGQQTNGKEGPA Trigger: GGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGCTTGCCTGGGCATCACCATCTCTCTCAGCCTCCACACGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 90 bp | GGCACACCTCACGCAGCATCCTTCACTAGTCTAAAAACCAGGTGCTaGCGCATCACCAGAGGTCTTGATGTCTGCAGGAATCTCTCACGA | + |
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Preference number: 1 (lower is better) Translates to: GTPHAASFTSLKTRC*RITRGLDVCRNLSR Trigger: TCGTGAGAGATTCCTGCAGACATCAAGACCTCTGGTGATGCGGCAGCACCTGGTTTTTAGACTAGTGAAGGATGCTGCGTGAGGTGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 90 bp | AACACCTGTGGATGCTCAGCAATGCATCTAACTACTTGGCCATGCTaGACAGCATCTCCTGGAACAGCTTCTCAGTCAATTACTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: NTCGCSAMHLTTWPC*TASPGTASQSITVS Trigger: GCTTACAGTAATTGACTGAGAAGCTGTTCCAGGAGATGCTGTGCAGCATGGCCAAGTAGTTAGATGCATTGCTGAGCATCCACAGGTGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 90 bp | GAAAACACCTGTGGATGCTCAGCAATGCATCTAACTACTTGGCCATaGTGCACAGCATCTCCTGGAACAGCTTCTCAGTCAATTACTGTA | + |
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Preference number: 1 (lower is better) Translates to: ENTCGCSAMHLTTWP*CTASPGTASQSITV Trigger: TACAGTAATTGACTGAGAAGCTGTTCCAGGAGATGCTGTGCAGCATGGCCAAGTAGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR CCA 90 bp | CTCAGCAATGCATCTAACTACTTGGCCATGCTGCACAGCATCTCCTaGAACAGCTTCTCAGTCAATTACTGTAAGCATATGATGGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: LSNASNYLAMLHSIS*NSFSVNYCKHMMVG Trigger: TCCAACCATCATATGCTTACAGTAATTGACTGAGAAGCTGTTCCAGGAGATGCTGTGCAGCATGGCCAAGTAGTTAGATGCATTGCTGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR TCA 90 bp | TTGATACTTTGTATCCTTGCCGCTTTGGGTACAACAAAGACCACATaGAAACACCTGTGGATGCTCAGCAATGCATCTAACTACTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: LILCILAALGTTKTT*KHLWMLSNASNYLA Trigger: GGCCAAGTAGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTACCCAAAGCGGCAAGGATACAAAGTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 90 bp | AATGTAGGAAACGTTGTCATGTTACGAGGACGCAGTTTAAATAACTaGTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTA | + |
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Preference number: 1 (lower is better) Translates to: NVGNVVMLRGRSLNN*CKKKATILDESQGV Trigger: TACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGTTATTTAAACTGCGTCCTCGTAACATGACAACGTTTCCTACATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCACCTGTCTGTTACACCTaGACACTGGTACAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SQSREPDLLVVEAIVISPPVCYT*TLVQER Trigger: CCTCTCCTGTACCAGTGTCCAGGTGTAACAGACAGG...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGCTCACGAGAACGTGTTaGATACCAAATGCTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQLTRTC*IPNAME Trigger: TTCCATAGCATTTGGTATTCAACACGTTCTCGTGAG...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGGTGTTGAATACCAAATaGTATGGAACTGCATCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQVLNTK*YGTASR Trigger: TCTAGATGCAGTTCCATAGCATTTGGTATTCAACAC...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCACAACTCATCCTGAGTTaGCAATCCTCTCTCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: SQSREPDLLVVEAIVISPQLILS*QSSLIP Trigger: AGGAATGAGAGAGGATTGCCAACTCAGGATGAGTTG...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR CAA 90 bp | CTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGCACAGAGAGTaGAACCCTGGTCCTCTGGAAGAGCAACAAGAGCTCTTTATCACC | + |
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Preference number: 2 (lower is better) Translates to: LVVEAIVISPYRHRE*NPGPLEEQQELFIT Trigger: GGTGATAAAGAGCTCTTGTTGCTCTTCCAGAGGACCAGGGTTCAACTCTCTGTGCCTATATGGAGAGATCACAATAGCCTCTACTACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTCAGAGAGTTGAACCCTaGTCCTCTGGAAGAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: TAARKRPLFWMKARVYSSQRVEP*SSGRAT Trigger: TGTTGCTCTTCCAGAGGACCAGGGTTCAACTCTCTG...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR TCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTCTGAAAGTTGTGGGCTaGAGAAGCCAAGAAGACGAT | + |
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Preference number: 2 (lower is better) Translates to: VQQRPHENTCGCSAMHLTLKVVG*RSQEDD Trigger: ATCGTCTTCTTGGCTTCTTCAGCCCACAACTTTCAG...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR GCA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGTATTCCTCAGTGATGTaGATCCATGATCAACTATCA | + |
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Preference number: 2 (lower is better) Translates to: SREPDLLVVEAIVISPYRYSSVM*IHDQLS Trigger: TGATAGTTGATCATGGATGCACATCACTGAGGAATA...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTATCCAGACTAGTTTCTaGAAACATTTGGGCACACCT | + |
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Preference number: 2 (lower is better) Translates to: TAARKRPLFWMKARVYSSIQTSF*KHLGTP Trigger: AGGTGTGCCCAAATGTTTCCAGAAACTAGTCTGGAT...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR TCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTTGTAGGAATCACCACTaGAAGTTGTGGGCTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: VQQRPHENTCGCSAMHLTCRNHH*KLWAEE Trigger: TTCTTCAGCCCACAACTTTCAGTGGTGATTCCTACA...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTATCCTCTCTCATTCCTaGACCCTGTATAAATGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TAARKRPLFWMKARVYSSILSHS*TLYKCL Trigger: TAGACATTTATACAGGGTTCAGGAATGAGAGAGGAT...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTACCTTTAACATGGTCTaGATGTTTCATTGTGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: TAARKRPLFWMKARVYSSTFNMV*MFHCVF Trigger: GAACACACAATGAAACATTCAGACCATGTTAAAGGT...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR TCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTCATATGGGGCTTTTCTaGAAAGCTGAAGAGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: VQQRPHENTCGCSAMHLTHMGLF*KAEERF Trigger: AAATCTCTCTTCAGCTTTTCAGAAAAGCCCCATATG...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR GCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTTTTGTGCCACTATGGTaGACAAATAAAGTAGGGATA | + |
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Preference number: 2 (lower is better) Translates to: VQQRPHENTCGCSAMHLTFVPLW*TNKVGI Trigger: TATCCCTACTTTATTTGTGCACCATAGTGGCACAAA...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTGTAGGGATAAATAACTaGGCTGTGTATATCGAACAA | + |
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Preference number: 2 (lower is better) Translates to: VQQRPHENTCGCSAMHLTVGINN*AVYIEQ Trigger: TTGTTCGATATACACAGCCCAGTTATTTATCCCTAC...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | CCTCACGCAGCATCCTTCACTAGTCTAAAAACCAGGTaGTGCCGCATCACCAGAGGTCTTGATGTCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PHAASFTSLKTR*CRITRGLDVCR Trigger: CCTGCAGACATCAAGACCTCTGGTGATGCGGCAGCACCTGGTTTTTAGACTAGTGAAGGATGCTGCGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | CACGCAGCATCCTTCACTAGTCTAAAAACCAGGTGCTaGCGCATCACCAGAGGTCTTGATGTCTGCAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: HAASFTSLKTRC*RITRGLDVCRN Trigger: ATTCCTGCAGACATCAAGACCTCTGGTGATGCGGCAGCACCTGGTTTTTAGACTAGTGAAGGATGCTGCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR CCA 72 bp | CAGAGGCGCTGTAATCAGGGAATCCAGACTAGTTTCTaGAAACATTTGGGCACACCTCACGCAGCATCCTTC | + |
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Preference number: 3 (lower is better) Translates to: QRRCNQGIQTSF*KHLGTPHAASF Trigger: GAAGGATGCTGCGTGAGGTGTGCCCAAATGTTTCCAGAAACTAGTCTGGATTCCCTGATTACAGCGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGGCATCACCAGAGGTCTaGATGTCTGCAGGAATCTCT | + |
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Preference number: 3 (lower is better) Translates to: SREPDLLVVEAIVISPYRASPEV*MSAGIS Trigger: AGAGATTCCTGCAGACATCAAGACCTCTGGTGATGC...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CAA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGAGTTTCTGGAAACATTaGGGCACACCTCACGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SREPDLLVVEAIVISPYRSFWKH*GTPHAA Trigger: TGCTGCGTGAGGTGTGCCCAAATGTTTCCAGAAACT...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | TGTGGATGCTCAGCAATGCATCTAACTACTTGGCCATaGTGCACAGCATCTCCTGGAACAGCTTCTCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: CGCSAMHLTTWP*CTASPGTASQS Trigger: TGACTGAGAAGCTGTTCCAGGAGATGCTGTGCAGCATGGCCAAGTAGTTAGATGCATTGCTGAGCATCCACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR CCA 72 bp | AACACCTGTGGATGCTCAGCAATGCATCTAACTACTTaGCCATGCTGCACAGCATCTCCTGGAACAGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: NTCGCSAMHLTT*PCCTASPGTAS Trigger: AGAAGCTGTTCCAGGAGATGCTGTGCAGCATGGCCAAGTAGTTAGATGCATTGCTGAGCATCCACAGGTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR TCA 72 bp | TGTATCCTTGCCGCTTTGGGTACAACAAAGACCACATaGAAACACCTGTGGATGCTCAGCAATGCATCTAAC | + |
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Preference number: 3 (lower is better) Translates to: CILAALGTTKTT*KHLWMLSNASN Trigger: GTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTACCCAAAGCGGCAAGGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR CCA 72 bp | CGAAATCAGACTAGTAAAAATCCTGTCTGTTACACCTaGACACTGGTACAGGAGAGGATCCTAACATGTACT | + |
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Preference number: 3 (lower is better) Translates to: RNQTSKNPVCYT*TLVQERILTCT Trigger: AGTACATGTTAGGATCCTCTCCTGTACCAGTGTCCAGGTGTAACAGACAGGATTTTTACTAGTCTGATTTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTGGGTCAAAGGACAATTaGCTTGTTGACAATATAAAG | + |
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Preference number: 3 (lower is better) Translates to: TAARKRPLFWMKARVYSSGSKDN*LVDNIK Trigger: CTTTATATTGTCAACAAGCAAATTGTCCTTTGACCC...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR-3UTR CAA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTAAAAAGGCCACTATTTaGGATGAAAGCCAGGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: VQQRPHENTCGCSAMHLTKKATI*DESQGV Trigger: TACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTT...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | GTTGTCATGTTACGAGGACGCAGTTTAAATAACTGCTaGAAGAAAAAGGCCACTATTTTGGATGAAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: VVMLRGRSLNNC*KKKATILDESQ Trigger: CTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGTTATTTAAACTGCGTCCTCGTAACATGACAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR TCA 72 bp | ACAACTCATCCTGAGTTGGCAATCCTCTCTCATTCCTaGACCCTGTATAAATGTCTACTAAGATCTTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: TTHPELAILSHS*TLYKCLLRSLD Trigger: GTCTAAAGATCTTAGTAGACATTTATACAGGGTTCAGGAATGAGAGAGGATTGCCAACTCAGGATGAGTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | AACGTTGTCATGTTACGAGGACGCAGTTTAAATAACTaGTGCAAGAAAAAGGCCACTATTTTGGATGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: NVVMLRGRSLNN*CKKKATILDES Trigger: GCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGTTATTTAAACTGCGTCCTCGTAACATGACAACGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | GAGAAACACAAAACAGCTAAGTCAAATTTGGACCACTaGTTGATAGCGAACACACACATAAACACATCGTCT | + |
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Preference number: 3 (lower is better) Translates to: EKHKTAKSNLDH*LIANTHINTSS Trigger: AGACGATGTGTTTATGTGTGTGTTCGCTATCAAGCAGTGGTCCAAATTTGACTTAGCTGTTTTGTGTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | ACCCTGTATAAATGTCTACTAAGATCTTTAGACTGTTaGTACAAATACCACATAAGAGAGCCCATGAACTCC | + |
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Preference number: 3 (lower is better) Translates to: TLYKCLLRSLDC*YKYHIREPMNS Trigger: GGAGTTCATGGGCTCTCTTATGTGGTATTTGTAGCAACAGTCTAAAGATCTTAGTAGACATTTATACAGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR GCA 72 bp | AATGCAATTTTATCGACAGTTGATACTTTGTATCCTTaGCGCTTTGGGTACAACAAAGACCACATGAAAACA | + |
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Preference number: 3 (lower is better) Translates to: NAILSTVDTLYP*RFGYNKDHMKT Trigger: TGTTTTCATGTGGTCTTTGTTGTACCCAAAGCGGCAAGGATACAAAGTATCAACTGTCGATAAAATTGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR TCA 72 bp | CATCTATTTGTTGTGAAATGCAATTTTATCGACAGTTaGTACTTTGTATCCTTGCCGCTTTGGGTACAACAA | + |
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Preference number: 3 (lower is better) Translates to: HLFVVKCNFIDS*YFVSLPLWVQQ Trigger: TTGTTGTACCCAAAGCGGCAAGGATACAAAGTATCAACTGTCGATAAAATTGCATTTCACAACAAATAGATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGGGCTCGTCGTGCTGCTaGCCCTCGCCACCGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQGSSCC*PSPPPA Trigger: GGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCC...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAAATCGGTCTGCCAGGTaGAGTCGCAGTCCTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: AEWGRRGQQTNGKEGPARNRSAR*SRSPPR Trigger: CCGTGGAGGACTGCGACTCCACCTGGCAGACCGATT...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR TCA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGTGGGCTCGCGGAAGCTaGCCCCGCCGAGCAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SREPDLLVVEAIVISPYRWARGS*PRRAGC Trigger: GCAACCTGCTCGGCGGGGTCAGCTTCCGCGAGCCCA...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR GCA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGGCTTGGGATCTCCACTaGCAGGCTCTGGGCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SREPDLLVVEAIVISPYRAWDLH*QALGSA Trigger: AGCCGAGCCCAGAGCCTGGCAGTGGAGATCCCAAGC...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR GCA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGATTTTCAGAGTCTTTaGTCTGGTCTTCCCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: AEWGRRGQQTNGKEGPARDFQSL*SGLPLL Trigger: GAGAAGGGGAAGACCAGAGCAAAGACTCTGAAAATC...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGATGGTTTGTGGGTTTGTaGCATTTTGCTGTGCCACTA | + |
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Preference number: 4 (lower is better) Translates to: AEWGRRGQQTNGKEGPARWFVGL*HFAVPL Trigger: TAGTGGCACAGCAAAATGCCACAAACCCACAAACCA...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAACCAGAACTGGTTTGTaGGTTTGTGGCATTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AEWGRRGQQTNGKEGPARTRTGL*VCGILL Trigger: CAGCAAAATGCCACAAACCCACAAACCAGTTCTGGT...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGGAGCCTCGTGAAGAATaGATTTTACCAGAGGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQEPREE*ILPEEI Trigger: AATCTCCTCTGGTAAAATTCATTCTTCACGAGGCTC...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGGATATCGGATATCTTTaGAGTTTGGGTACTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQDIGYL*SLGTDV Trigger: GACATCAGTACCCAAACTTCAAAGATATCCGATATC...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR TCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGCCAGATGAAATTCTCTaGTGGTGTGTAATGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQPDEIL*WCVMFL Trigger: CAGAAACATTACACACCATCAGAGAATTTCATCTGG...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR GCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTGGCTCCGAATCGGTCTaGCAGGTGGAGTCGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VQQRPHENTCGCSAMHLTGSESV*QVESQS Trigger: GGACTGCGACTCCACCTGGCAGACCGATTCGGAGCC...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR GCA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGTACTCCAGAGCACTCTaGTTAATATTGGGAATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQYSRAL*LILGIV Trigger: TACTATTCCCAATATTAAGCAGAGTGCTCTGGAGTA...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCAAGCTTCTCTTTGGTTTaGCATTTCCTTCCGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SQSREPDLLVVEAIVISPSFSLV*HFLPWT Trigger: AGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCT...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGCATTGGATGTACGTGTaGTTGTGCTCCAGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SREPDLLVVEAIVISPYRHWMYV*LCSSFS Trigger: CGAGAAGCTGGAGCACAACCACACGTACATCCAATG...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| 3UTR CAA 72 bp | AAACACCTGTGGATGCTCAGCAATGCATCTAACTACTaGGCCATGCTGCACAGCATCTCCTGGAACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KHLWMLSNASNY*AMLHSISWNSF Trigger: GAAGCTGTTCCAGGAGATGCTGTGCAGCATGGCCAAGTAGTTAGATGCATTGCTGAGCATCCACAGGTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | AGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATATAGGTTTCTCTGTGTTTCTTaGCTTGGGATCTCCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SREPDLLVVEAIVISPYRFLCVS*LGISTA Trigger: GGCAGTGGAGATCCCAAGCCAAGAAACACAGAGAAA...CCTATATGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTAGGGGGAAAAGCCATTaGATGTACGTGTGGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAARKRPLFWMKARVYSSRGKSH*MYVWLC Trigger: GCACAACCACACGTACATCCAATGGCTTTTCCCCCT...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTGGTGGAGAATCAGATTaGTCAGCAGCACTGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAARKRPLFWMKARVYSSGGESD*SAALSF Trigger: GAAAGACAGTGCTGCTGACCAATCTGATTCTCCACC...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTTCAGAGTCTTTGCTCTaGTCTTCCCCTTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TAARKRPLFWMKARVYSSSESLL*SSPSPS Trigger: AGATGGAGAAGGGGAAGACCAGAGCAAAGACTCTGA...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTTACGTGACTAGCTCCTaGGGAAATTTTGGAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAARKRPLFWMKARVYSSYVTSS*GNFGVL Trigger: AAGGACTCCAAAATTTCCCCAGGAGCTAGTCACGTA...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| 3UTR CAA 72 bp | TGTAATCAGGGAATCCAGACTAGTTTCTGGAAACATTaGGGCACACCTCACGCAGCATCCTTCACTAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CNQGIQTSFWKH*GTPHAASFTSL Trigger: TAGACTAGTGAAGGATGCTGCGTGAGGTGTGCCCAAATGTTTCCAGAAACTAGTCTGGATTCCCTGATTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR GCA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTACATTCCCCTTTTCCTaGGGTATCAGGAACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAARKRPLFWMKARVYSSTFPFS*GIRNCF Trigger: AAAACAGTTCCTGATACCGCAGGAAAAGGGGAATGT...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTCAGTTCTTTCTTAGGTaGCCCCCAGATGAAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQQRPHENTCGCSAMHLTQFFLR*PPDEIL Trigger: GAGAATTTCATCTGGGGGCCACCTAAGAAAGAACTG...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR TCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTTTGAAGTTTGGGTACTaGTGTCGGTACTTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQQRPHENTCGCSAMHLTLKFGY*CRYLYR Trigger: TCTGTACAAGTACCGACATCAGTACCCAAACTTCAA...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CCA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTCTCCTGGGGAAATTTTaGAGTCCTTGGATTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQQRPHENTCGCSAMHLTLLGKF*SPWISC Trigger: ACAAGAAATCCAAGGACTCCAAAATTTCCCCAGGAG...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| 3UTR CAA 72 bp | GCATCTATTTGTTGTGAAATGCAATTTTATCGACAGTaGATACTTTGTATCCTTGCCGCTTTGGGTACAACA | + |
|
Preference number: 4 (lower is better) Translates to: ASICCEMQFYRQ*ILCILAALGTT Trigger: TGTTGTACCCAAAGCGGCAAGGATACAAAGTATCAACTGTCGATAAAATTGCATTTCACAACAAATAGATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 90 bp | CTGGCGCGGGGCCGCCCTCCGGCTCTCTCGGGAGGTTGCTTGGGCTaGTCCGGCTCGTCGTGCTGCTGGCCCTCGCCACCGCCTGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LARGRPPALSGGCLG*SGSSCCWPSPPPAG Trigger: GCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGGGCGGCCCCGCGCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 90 bp | GGCACGGGGCTGGCGCGGGGCCGCCCTCCGGCTCTCTCGGGAGGTTaGTTGGGCTGCTCCGGCTCGTCGTGCTGCTGGCCCTCGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: GTGLARGRPPALSGG*LGCSGSSCCWPSPP Trigger: CGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGGGCGGCCCCGCGCCAGCCCCGTGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS CCA 90 bp | CGGGGCTGGCGCGGGGCCGCCCTCCGGCTCTCTCGGGAGGTTGCTTaGGCTGCTCCGGCTCGTCGTGCTGCTGGCCCTCGCCACCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGWRGAALRLSREVA*AAPARRAAGPRHRL Trigger: CAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGGGCGGCCCCGCGCCAGCCCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 90 bp | CCGGCTCTCTCGGGAGGTTGCTTGGGCTGCTCCGGCTCGTCGTGCTaGTGGCCCTCGCCACCGCCTGCCGGCCCCGGCTGCTCGGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PALSGGCLGCSGSSC*WPSPPPAGPGCSGS Trigger: CGAGCCCGAGCAGCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 90 bp | CCTCCGGCTCTCTCGGGAGGTTGCTTGGGCTGCTCCGGCTCGTCGTaGTGCTGGCCCTCGCCACCGCCTGCCGGCCCCGGCTGCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPALSGGCLGCSGSS*CWPSPPPAGPGCSG Trigger: GCCCGAGCAGCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 90 bp | GCTCTCTCGGGAGGTTGCTTGGGCTGCTCCGGCTCGTCGTGCTGCTaGCCCTCGCCACCGCCTGCCGGCCCCGGCTGCTCGGGCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALSGGCLGCSGSSCC*PSPPPAGPGCSGSG Trigger: GCCCGAGCCCGAGCAGCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 90 bp | GGCTCGTCGTGCTGCTGGCCCTCGCCACCGCCTGCCGGCCCCGGCTaGTCGGGCTCGGGCTCCGAATCGGTCTGCCAGGTGGAGTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSSCCWPSPPPAGPG*SGSGSESVCQVESQ Trigger: CTGCGACTCCACCTGGCAGACCGATTCGGAGCCCGAGCCCGAGCAGCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 90 bp | AAGCTTCTCTTTGGTTTGGCATTTCCTTCCGTGGACTCGCCGCCCTaGTCCGCGCCCGCCGCCTCGGCGTGGTCCTCGGGCACGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLLFGLAFPSVDSPP*SAPAASAWSSGTGL Trigger: CAGCCCCGTGCCCGAGGACCACGCCGAGGCGGCGGGCGCGGAGCAGGGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 90 bp | GGTACTTGTACAGATCCCTCGCGGCATAGAAGCTTCTCTTTGGTTTaGCATTTCCTTCCGTGGACTCGCCGCCCTGCTCCGCGCCCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GTCTDPSRHRSFSLV*HFLPWTRRPAPRPP Trigger: CGGCGGGCGCGGAGCAGGGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTTCTATGCCGCGAGGGATCTGTACAAGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCAGGCTCTCTCGGGAGGTaGCTTGGGCTGCTCCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQSREPDLLVVEAIVISPGSLGR*LGLLRL Trigger: GAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCC...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTGGCTCTGGGCTCGGCTaGTCCGCCTCCTCCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TAARKRPLFWMKARVYSSGSGLG*SASSPG Trigger: GCCTGGGGAGGAGGCGGACAAGCCGAGCCCAGAGCC...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGCAGGGGGAAAAGCCATaGGATGTACGTGTGGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQQGEKP*DVRVVV Trigger: CACAACCACACGTACATCCAATGGCTTTTCCCCCTG...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTCTCTCGGGAGGTTGCTaGGGCTGCTCCGGCTCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TAARKRPLFWMKARVYSSLSGGC*GCSGSS Trigger: CGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAG...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGACTTTCTCTGTGTTTCTaGGCTTGGGATCTCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: AEWGRRGQQTNGKEGPARLSLCF*AWDLHC Trigger: GCAGTGGAGATCCCAAGCCAAGAAACACAGAGAAAG...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAAAGCTTCTCTTTGGTTaGGCATTTCCTTCCGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: AEWGRRGQQTNGKEGPARKLLFG*AFPSVD Trigger: GTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTT...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCTCCTGGGGAAATTTaGGAGTCCTTGGATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AEWGRRGQQTNGKEGPARAPGEI*ESLDFL Trigger: CAAGAAATCCAAGGACTCCAAAATTTCCCCAGGAGC...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCATCTGTGTTTCTTGGCTaGGGATCTCCACTGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSREPDLLVVEAIVISPSVFLG*GSPLPG Trigger: GCCTGGCAGTGGAGATCCCAAGCCAAGAAACACAGA...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | AGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCAGGGATTTTCAGAGTCTTaGCTCTGGTCTTCCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGEDEDSRPMGRKDQPEQGFSES*LWSSPS Trigger: AGAAGGGGAAGACCAGAGCAAAGACTCTGAAAATCC...CTGCTCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGACATAGAAGCTTCTCTTaGGTTTGGCATTTCCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: AEWGRRGQQTNGKEGPARHRSFS*VWHFLP Trigger: CGGAAGGAAATGCCAAACCAAAGAGAAGCTTCTATG...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCAATGTTGAAATCTTTCTaGCCAGTTTCCGGCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSREPDLLVVEAIVISPMLKSF*PVSGPS Trigger: GCTCGGGCCGGAAACTGGCAAGAAAGATTTCAACAT...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CAA 90 bp | GCAGAGTGGGGAAGACGAGGACAGCAGACCAATGGGAAGGAAGGACCAGCCAGAGCACTCTGCTTAATATaGGGAATAGTATTCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AEWGRRGQQTNGKEGPARALCLI*GIVFST Trigger: AGTGGAGAATACTATTCCCAATATTAAGCAGAGTGC...TCTGGCTGGTCCTTCCTTCCCATTGGTCTGCTGTCCTCGTCTTCCCCACTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CAA 90 bp | AGCCAGAGCAGGGAGCCAGATCTCCTGGTAGTAGAGGCTATTGTGATCTCTCCAAACTGGTTTGTGGGTTaGTGGCATTTTGCTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQSREPDLLVVEAIVISPNWFVG*WHFAVP Trigger: TGGCACAGCAAAATGCCACAAACCCACAAACCAGTT...TGGAGAGATCACAATAGCCTCTACTACCAGGAGATCTGGCTCCCTGCTCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTGGGGTTTTCTGGGCTTaGCTTCGCTCTGGCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAARKRPLFWMKARVYSSGVFWA*LRSGSS Trigger: AGAACTGCCAGAGCGAAGCAAAGCCCAGAAAACCCC...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS TCA 90 bp | TCGCTCTGGCAGTTCTTTCTTAGGTGGCCCCCAGATGAAATTCTCTaGTGGTGTGTAATGTTTCTGGGCAAATCGCAGGAGCTTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLWQFFLRWPPDEIL*WCVMFLGKSQELSP Trigger: AGGAGAAAGCTCCTGCGATTTGCCCAGAAACATTACACACCATCAGAGAATTTCATCTGGGGGCCACCTAAGAAAGAACTGCCAGAGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS CCA 90 bp | TTTCCTGCGGTATCAGGAACTGTTTTCTCGGGTGGAGAATCAGATTaGTCAGCAGCACTGTCTTTCTCTGTGTTTCTTGGCTTGGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: FPAVSGTVFSGGESD*SAALSFSVFLGLGS Trigger: AGATCCCAAGCCAAGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTTCCTGATACCGCAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CAA 90 bp | GTACAACAAAGACCACATGAAAACACCTGTGGATGCTCAGCAATGCATCTAACTCTTGTGTGTAGAAGTTaGACCATTGGAGCCCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: VQQRPHENTCGCSAMHLTLVCRS*TIGARR Trigger: GCGTCGGGCTCCAATGGTCAAACTTCTACACACAAG...AGTTAGATGCATTGCTGAGCATCCACAGGTGTTTTCATGTGGTCTTTGTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS-3UTR CAA 90 bp | ACTGCTGCAAGAAAAAGGCCACTATTTTGGATGAAAGCCAGGGTGTACTCCTCTGAAATTTTGGAGTCCTaGGATTTCTTGTGTGTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAARKRPLFWMKARVYSSEILES*DFLCVE Trigger: TTCTACACACAAGAAATCCAAGGACTCCAAAATTTC...AGAGGAGTACACCCTGGCTTTCATCCAAAATAGTGGCCTTTTTCTTGCAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
||
| CDS TCA 90 bp | GCACTCTGCTTAATATTGGGAATAGTATTCTCCACTAGAGCCTCGTaGAGAATGAATTTTACCAGAGGAGATTTAAAACTCTCGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALCLILGIVFSTRAS*RMNFTRGDLKLSYP Trigger: TGGATACGAGAGTTTTAAATCTCCTCTGGTAAAATTCATTCTTCACGAGGCTCTAGTGGAGAATACTATTCCCAATATTAAGCAGAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027343.6 ENSMUST00000188677.2 |
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| CDS CAA 90 bp | GGGCACGGGGCTGGCGCGGGGCCGCCCTCCGGCTCTCTCGGGAGGTaGCTTGGGCTGCTCCGGCTCGTCGTGCTGCTGGCCCTCGCCACC | + |
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Preference number: 6 (lower is better) Translates to: GHGAGAGPPSGSLGR*LGLLRLVVLLALAT Trigger: GGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGGGCGGCCCCGCGCCAGCCCCGTGCCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 90 bp | ACGGGGCTGGCGCGGGGCCGCCCTCCGGCTCTCTCGGGAGGTTGCTaGGGCTGCTCCGGCTCGTCGTGCTGCTGGCCCTCGCCACCGCCT | + |
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Preference number: 6 (lower is better) Translates to: TGLARGRPPALSGGC*GCSGSSCCWPSPPP Trigger: AGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGGGCGGCCCCGCGCCAGCCCCGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 72 bp | TGCTGCTGGCCCTCGCCACCGCCTGCCGGCCCCGGCTaGTCGGGCTCGGGCTCCGAATCGGTCTGCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: CCWPSPPPAGPG*SGSGSESVCQV Trigger: CACCTGGCAGACCGATTCGGAGCCCGAGCCCGAGCAGCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 72 bp | TCGGGAGGTTGCTTGGGCTGCTCCGGCTCGTCGTGCTaGTGGCCCTCGCCACCGCCTGCCGGCCCCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGGCLGCSGSSC*WPSPPPAGPGC Trigger: GCAGCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 72 bp | CTCTCGGGAGGTTGCTTGGGCTGCTCCGGCTCGTCGTaGTGCTGGCCCTCGCCACCGCCTGCCGGCCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LSGGCLGCSGSS*CWPSPPPAGPG Trigger: GCCGGGGCCGGCAGGCGGTGGCGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 72 bp | GCGCGGGGCCGCCCTCCGGCTCTCTCGGGAGGTTGCTaGGGCTGCTCCGGCTCGTCGTGCTGCTGGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ARGRPPALSGGC*GCSGSSCCWPS Trigger: CGAGGGCCAGCAGCACGACGAGCCGGAGCAGCCCAAGCAACCTCCCGAGAGAGCCGGAGGGCGGCCCCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 72 bp | GGCCCCGGCTGCTCGGGCTCGGGCTCCGAATCGGTCTaGCAGGTGGAGTCGCAGTCCTCCACGGTGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPGCSGSGSESV*QVESQSSTVVG Trigger: GCCCACCACCGTGGAGGACTGCGACTCCACCTGGCAGACCGATTCGGAGCCCGAGCCCGAGCAGCCGGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 72 bp | TTTGGTTTGGCATTTCCTTCCGTGGACTCGCCGCCCTaGTCCGCGCCCGCCGCCTCGGCGTGGTCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: FGLAFPSVDSPP*SAPAASAWSSG Trigger: GCCCGAGGACCACGCCGAGGCGGCGGGCGCGGAGCAGGGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 72 bp | GCTGCTCGGGCTCGGGCTCCGAATCGGTCTGCCAGGTaGAGTCGCAGTCCTCCACGGTGGTGGGCTCGCGGA | + |
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Preference number: 6 (lower is better) Translates to: AARARAPNRSAR*SRSPPRWWARG Trigger: TCCGCGAGCCCACCACCGTGGAGGACTGCGACTCCACCTGGCAGACCGATTCGGAGCCCGAGCCCGAGCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 72 bp | TGTGTTTCTTGGCTTGGGATCTCCACTGCCAGGCTCTaGGCTCGGCTTGTCCGCCTCCTCCCCAGGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CVSWLGISTARL*ARLVRLLPRLS Trigger: AGAGAGCCTGGGGAGGAGGCGGACAAGCCGAGCCCAGAGCCTGGCAGTGGAGATCCCAAGCCAAGAAACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 72 bp | GAGCCCGACGCGGGCAGAGTCGGGGTTTTCTGGGCTTaGCTTCGCTCTGGCAGTTCTTTCTTAGGTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: EPDAGRVGVFWA*LRSGSSFLGGP Trigger: GGGGCCACCTAAGAAAGAACTGCCAGAGCGAAGCAAAGCCCAGAAAACCCCGACTCTGCCCGCGTCGGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 90 bp | GATGTCGGTACTTGTACAGATCCCTCGCGGCATAGAAGCTTCTCTTaGGTTTGGCATTTCCTTCCGTGGACTCGCCGCCCTGCTCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: DVGTCTDPSRHRSFS*VWHFLPWTRRPAPR Trigger: GCGCGGAGCAGGGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTTCTATGCCGCGAGGGATCTGTACAAGTACCGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 72 bp | ACAGATCCCTCGCGGCATAGAAGCTTCTCTTTGGTTTaGCATTTCCTTCCGTGGACTCGCCGCCCTGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: TDPSRHRSFSLV*HFLPWTRRPAP Trigger: CGGAGCAGGGCGGCGAGTCCACGGAAGGAAATGCCAAACCAAAGAGAAGCTTCTATGCCGCGAGGGATCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 90 bp | GAATCAGATTGGTCAGCAGCACTGTCTTTCTCTGTGTTTCTTGGCTaGGGATCTCCACTGCCAGGCTCTGGGCTCGGCTTGTCCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ESDWSAALSFSVFLG*GSPLPGSGLGLSAS Trigger: GGAGGCGGACAAGCCGAGCCCAGAGCCTGGCAGTGGAGATCCCAAGCCAAGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 72 bp | TGGTCAGCAGCACTGTCTTTCTCTGTGTTTCTTGGCTaGGGATCTCCACTGCCAGGCTCTGGGCTCGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: WSAALSFSVFLG*GSPLPGSGLGL Trigger: CAAGCCGAGCCCAGAGCCTGGCAGTGGAGATCCCAAGCCAAGAAACACAGAGAAAGACAGTGCTGCTGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS GCA 72 bp | ACCAGAACTGGTTTGTGGGTTTGTGGCATTTTGCTGTaGCACTACCTCAGCATGACAACCGGCATTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRTGLWVCGILL*HYLSMTTGIFR Trigger: CCTGAAAATGCCGGTTGTCATGCTGAGGTAGTGGCACAGCAAAATGCCACAAACCCACAAACCAGTTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 72 bp | CCCTTTTCCTGCGGTATCAGGAACTGTTTTCTCGGGTaGAGAATCAGATTGGTCAGCAGCACTGTCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PFSCGIRNCFLG*RIRLVSSTVFL Trigger: GAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTTCCTGATACCGCAGGAAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 90 bp | TTTTCCTGCGGTATCAGGAACTGTTTTCTCGGGTGGAGAATCAGATaGGTCAGCAGCACTGTCTTTCTCTGTGTTTCTTGGCTTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: FSCGIRNCFLGWRIR*VSSTVFLCVSWLGI Trigger: GATCCCAAGCCAAGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTTCCTGATACCGCAGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS TCA 72 bp | CAGTTCTTTCTTAGGTGGCCCCCAGATGAAATTCTCTaGTGGTGTGTAATGTTTCTGGGCAAATCGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QFFLRWPPDEIL*WCVMFLGKSQE Trigger: CTCCTGCGATTTGCCCAGAAACATTACACACCATCAGAGAATTTCATCTGGGGGCCACCTAAGAAAGAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CCA 72 bp | GTATCAGGAACTGTTTTCTCGGGTGGAGAATCAGATTaGTCAGCAGCACTGTCTTTCTCTGTGTTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: VSGTVFSGGESD*SAALSFSVFLG Trigger: GCCAAGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTTCCTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS CAA 72 bp | GGTATCAGGAACTGTTTTCTCGGGTGGAGAATCAGATaGGTCAGCAGCACTGTCTTTCTCTGTGTTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GIRNCFLGWRIR*VSSTVFLCVSW Trigger: CCAAGAAACACAGAGAAAGACAGTGCTGCTGACCAATCTGATTCTCCACCCGAGAAAACAGTTCCTGATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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| CDS TCA 72 bp | TTAATATTGGGAATAGTATTCTCCACTAGAGCCTCGTaGAGAATGAATTTTACCAGAGGAGATTTAAAACTC | + |
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Preference number: 6 (lower is better) Translates to: LILGIVFSTRAS*RMNFTRGDLKL Trigger: GAGTTTTAAATCTCCTCTGGTAAAATTCATTCTTCACGAGGCTCTAGTGGAGAATACTATTCCCAATATTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027343.6 ENSMUST00000188677.2 |
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| CDS CAA 72 bp | TTTGTTCTTATAAAAGCGAAGGTTGCTCAAGTCATTTaGATATCGGATATCTTTGAAGTTTGGGTACTGATG | + |
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Preference number: 6 (lower is better) Translates to: FVLIKAKVAQVI*ISDIFEVWVLM Trigger: CATCAGTACCCAAACTTCAAAGATATCCGATATCAAAATGACTTGAGCAACCTTCGCTTTTATAAGAACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027343.6 |
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