Pregenerated sensors for OGFR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049401Ensembl transcript IDs: ENSMUST00000029087.4
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTCCCTGAGGGCAGGGCCTCAGTCCCTCTGGTGGCCACTTCAGTaGCCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: PSLRAGPQSLWWPLQ*PLGRGQHCGAPRRA Trigger: GGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCACTGAAGTGGCCACCAGAGGGACTGAGGCCCTGCCCTCAGGGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| 3UTR CCA 90 bp | CCTCTGGTGGCCACTTCAGTGACCACTAGGGAGAGGCCAGCACTGTaGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACC | + |
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Preference number: 1 (lower is better) Translates to: PLVATSVTTRERPAL*GTKKSQQQSSGTET Trigger: GGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCACTGAAGTGGCCACCAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCAGGCCTTGGCCTTCCCTaGGGGCAGGGCCTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KSLFRKGLTWHQTKKRGPGLGLP*GQGLSP Trigger: GGGACTGAGGCCCTGCCCTCAGGGAAGGCCAAGGCC...TGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| 3UTR CCA 72 bp | GCCACTTCAGTGACCACTAGGGAGAGGCCAGCACTGTaGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ATSVTTRERPAL*GTKKSQQQSSG Trigger: CCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCACTGAAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GTGACCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGACGAGCTCCCGGCGCTaGTGCCGGCAGCGCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: VTTRERPALWGTKKSQQQTSSRR*CRQRTA Trigger: TGCCGTGCGCTGCCGGCACCAGCGCCGGGAGCTCGT...CTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTGGCCACTTCAGTGACCACTAGGGAGAGGCCAGCACTGTGGGGCACCAGACTGGAACAGGCTTaGCCGTGCCTCCTCCGCGTC | + |
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Preference number: 4 (lower is better) Translates to: PLVATSVTTRERPALWGTRLEQA*PCLLRV Trigger: GACGCGGAGGAGGCACGGCCAAGCCTGTTCCAGTCT...GGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCACTGAAGTGGCCACCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | CCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTAGGTCCGACCCTGGGTaGCAGCCTCTTGGGAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLGRGQHCGAPRRANNRARSDPG*QPLGRG Trigger: ACCCCTCCCAAGAGGCTGGCACCCAGGGTCGGACCT...AGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | TCAGAGGGCAGTGGAGGACACAGTGAGGTAAGGAGGCTTCTGAAGGCCTTGGCCCCACAGGTCCGACCCTaGGTGCCAGCCTCTTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SEGSGGHSEVRRLLKALAPQVRP*VPASWE Trigger: CTCCCAAGAGGCTGGCACCCAGGGTCGGACCTGTGG...GGCCAAGGCCTTCAGAAGCCTCCTTACCTCACTGTGTCCTCCACTGCCCTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGAGCCCCACCTGGCTTTTaGGGTCCTCTGGCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: GRGQHCGAPRRANNRALGAPPGF*GPLAPP Trigger: AGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGGGC...TCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | CCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTTGCTCTGGCCCCACCTaGCTTTGGGGGTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: PLGRGQHCGAPRRANNRACSGPT*LWGSSG Trigger: GCCAGAGGACCCCCAAAGCCAGGTGGGGCCAGAGCA...AGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | ACCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCGACACCCTGAGGATCTaGCTCCCCTGGGACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TTRERPALWGTKKSQQQSDTLRI*LPWDLL Trigger: GAGCAGGTCCCAGGGGAGCCAGATCCTCAGGGTGTC...GCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGATCTTCTGGCCCCACCTaGCCTTTTGGGTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRGQHCGAPRRANNRALGSSGPT*PFGSSG Trigger: GCCAGAGGACCCAAAAGGCCAGGTGGGGCCAGAAGA...TCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR TCA 90 bp | ACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTACCTCAGAGACACCCTaGGGATCTGGCTCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TRERPALWGTKKSQQQSSTSETP*GSGSPG Trigger: CCCAGGGGAGCCAGATCCTCAGGGTGTCTCTGAGGT...AGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | AGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGCCTGGGACCTGCTCCTaGCTGTTCCCCTCCAACTTC | + |
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Preference number: 4 (lower is better) Translates to: RGQHCGAPRRANNRALGQPGTCS*LFPSNF Trigger: GAAGTTGGAGGGGAACAGGCAGGAGCAGGTCCCAGG...CTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | CCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTAGGATCTGGCTCCCCTaGGACCTGCTCCTGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: PLGRGQHCGAPRRANNRARIWLP*DLLLPV Trigger: AACAGGCAGGAGCAGGTCCCAGGGGAGCCAGATCCT...AGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGAGCCTTTTGGGTCCTCTaGCTCCACCTGGCCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRGQHCGAPRRANNRALGAFWVL*LHLAFW Trigger: CCAAAAGGCCAGGTGGAGCCAGAGGACCCAAAAGGC...TCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GTGACCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGTCCTCTGGCCCCACCTaGCCTTTTGGGTCTTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VTTRERPALWGTKKSQQQSSGPT*PFGSSG Trigger: GCCAGAAGACCCAAAAGGCCAGGTGGGGCCAGAGGA...CTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | AGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGGCTCCACCTGGCTTTTaGGGTCCTCTGGCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: RGQHCGAPRRANNRALGQAPPGF*GPLAPP Trigger: AGGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGAGC...CTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | CAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCAGAGGCAGCTTGCTCTaGCCCCACCTGGCTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QHCGAPRRANNRALGQKPRGSLL*PHLALG Trigger: CCCCAAAGCCAGGTGGGGCCAGAGCAAGCTGCCTCT...GGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR TCA 90 bp | CACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTGGACTCAGGACACTCTaGAGGGGTAGGAGACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: HQEEPTTELWDRNPLQWAGLRTL*RGRRQG Trigger: GCCCTGTCTCCTACCCCTTCAGAGTGTCCTGAGTCC...AGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR TCA 90 bp | TCAGAGGGCAGTGGAGGACACAGTGAGGTAAGGAGGCTTCTGAAGGCCTTGGCCTGTGGCTGTGGCTGTTaGGATTGTGGAAGCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SEGSGGHSEVRRLLKALACGCGC*DCGSVA Trigger: AGCCACGCTTCCACAATCTCAACAGCCACAGCCACA...GGCCAAGGCCTTCAGAAGCCTCCTTACCTCACTGTGTCCTCCACTGCCCTCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGCTTGTCATCCTAGACTaGAACAGGCTTGGCCGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VGHQEEPTTELWDRNPLQLVILD*NRLGRA Trigger: GGCACGGCCAAGCCTGTTCCAGTCTAGGATGACAAG...CTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | CAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTAATTAGGACTGAGCCCCACCTGGCCTTTTaGGTCCTCTGGCTCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: QQQSSGTETPCSGLIRTEPHLAF*VLWLHL Trigger: CAGGTGGAGCCAGAGGACCCAAAAGGCCAGGTGGGG...CTCAGTCCTAATTAGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | AAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTAATTAGGTCCTCTGGCCCCACCTaGCCTTTTGGGTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KSQQQSSGTETPCSGLIRSSGPT*PFGSSG Trigger: GCCAGAGGACCCAAAAGGCCAGGTGGGGCCAGAGGA...CCTAATTAGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | AGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGTCATCTTTATCTGCCTaGCCTAGTCCCATCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: RGQHCGAPRRANNRALGQSSLSA*PSPISG Trigger: GCCACTGATGGGACTAGGGCAGGCAGATAAAGATGA...CTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | CAAAAGACAAAGCCTAAAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACAGCTCCCGGCGCTGGTaGCGGCAGCGCACGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: QKTKPKEFIQKRPHLAPDSSRRW*RQRTAN Trigger: GTTTGCCGTGCGCTGCCGGCACCAGCGCCGGGAGCT...GTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTTTAGGCTTTGTCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | TCAGAGGGCAGTGGAGGACACAGTGAGGTAAGGAGGCTTCTGAAGGCCTTGGCCCCATTCCCATCCTTTTaGGACTCAGGACACTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SEGSGGHSEVRRLLKALAPFPSF*DSGHSE Trigger: TTCAGAGTGTCCTGAGTCCCAAAAGGATGGGAATGG...GGCCAAGGCCTTCAGAAGCCTCCTTACCTCACTGTGTCCTCCACTGCCCTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR TCA 90 bp | GCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCGAAGAATGTCCTCAATaGGAAAGCCATTTGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ALWGTKKSQQQSSGTETPEECPQ*ESHLAG Trigger: TCCAGCCAAATGGCTTTCTCATTGAGGACATTCTTC...GGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | AGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAGATTGTTGTGGCTGTaGCTGTTGAGATTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RGQHCGAPRRANNRALGQRLLWL*LLRLWK Trigger: CTTCCACAATCTCAACAGCCACAGCCACAACAATCT...CTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | GTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGATACGCAGATTGTTGTaGCTGTGGCTGTTGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: VGHQEEPTTELWDRNPLQIRRLL*LWLLRL Trigger: CAATCTCAACAGCCACAGCCACAACAATCTGCGTAT...CTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | GTGACCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGCTTGGAGCTTTTAAATaGCTCAACCTCCTTCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: VTTRERPALWGTKKSQQQLGAFK*LNLLQC Trigger: ACACTGAAGGAGGTTGAGGCATTTAAAAGCTCCAAG...CTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | AAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCAGTGAGGGGCTTGGCATaGCAGTTCACTCCTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: KSLFRKGLTWHQTKKRGPVRGLA*QFTPGS Trigger: GGAACCAGGAGTGAACTGGCATGCCAAGCCCCTCAC...TGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR TCA 90 bp | AAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCAGCACTGGCCTGCACTTaGGTGTTACTGGCTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KSLFRKGLTWHQTKKRGPALACT*VLLATP Trigger: TGGAGTAGCCAGTAACACTCAAGTGCAGGCCAGTGC...TGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR GCA 90 bp | AAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCAGGGGACTTAGCCTCATaGCTTTGGTCCCCATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KSLFRKGLTWHQTKKRGPGDLAS*LWSPSK Trigger: CTTGGATGGGGACCAAAGGCATGAGGCTAAGTCCCC...TGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGCCTAAAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAATCCTCTGGCTCCACCTaGCCTTTTGGGTCCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TKPKEFIQKRPHLAPDEESSGST*PFGSSG Trigger: GCCAGAGGACCCAAAAGGCCAGGTGGAGCCAGAGGA...TTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTTTAGGCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR TCA 90 bp | ACAAAGCCTAAAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAACAACCTCCTTCAGTGTaGGGGGCTTGGCATGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TKPKEFIQKRPHLAPDEEQPPSV*GAWHAS Trigger: ACTGGCATGCCAAGCCCCTCACACTGAAGGAGGTTG...TTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTTTAGGCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | CAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTAATTAGGACTGAGAGAAAGCCATTTGGCTaGAAGCAGATCTCATTTTTG | + |
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Preference number: 4 (lower is better) Translates to: QQQSSGTETPCSGLIRTERKPFG*KQISFL Trigger: CAAAAATGAGATCTGCTTCCAGCCAAATGGCTTTCT...CTCAGTCCTAATTAGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CCA 90 bp | ACAAAGCCTAAAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAATGAGAAAGCCATTTaGCTGGAAGCAGATCTCATT | + |
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Preference number: 4 (lower is better) Translates to: TKPKEFIQKRPHLAPDEENEKAI*LEADLI Trigger: AATGAGATCTGCTTCCAGCCAAATGGCTTTCTCATT...TTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTTTAGGCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS GCA 90 bp | CCCCAGACAAACTCTCGGCGAGGCTTGAAGTGCTCCCAAGCAAAGTaGACGAGCTCCCGGCGCTGGTGCCGGCAGCGCACGGCAAACAGG | + |
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Preference number: 5 (lower is better) Translates to: PQTNSRRGLKCSQAK*TSSRRWCRQRTANR Trigger: CCTGTTTGCCGTGCGCTGCCGGCACCAGCGCCGGGAGCTCGTGCACTTTGCTTGGGAGCACTTCAAGCCTCGCCGAGAGTTTGTCTGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS GCA 90 bp | AGCTTGTCACGGGGCCCCCAGACAAACTCTCGGCGAGGCTTGAAGTaGTCCCAAGCAAAGTGCACGAGCTCCCGGCGCTGGTGCCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLSRGPQTNSRRGLK*SQAKCTSSRRWCRQ Trigger: CTGCCGGCACCAGCGCCGGGAGCTCGTGCACTTTGCTTGGGAGCACTTCAAGCCTCGCCGAGAGTTTGTCTGGGGGCCCCGTGACAAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CAA 90 bp | CCTCTGGTGGCCACTTCAGTGACCACTAGGGAGAGGCCAGCACTGTGGGGCACCGCCCCACCTGGCCTTTaGGGTCCTCTGGCTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: PLVATSVTTRERPALWGTAPPGL*GPLAPP Trigger: AGGTGGAGCCAGAGGACCCAAAAGGCCAGGTGGGGC...GGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCACTGAAGTGGCCACCAGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CAA 90 bp | CCTCTGGTGGCCACTTCAGTGACCACTAGGGAGAGGCCAGCACTGTGGGGCACCGCTCTTAGAGGCAGCTaGCTCTGGCCCCACCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PLVATSVTTRERPALWGTALRGS*LWPHLA Trigger: AGCCAGGTGGGGCCAGAGCAAGCTGCCTCTAAGAGC...GGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGTCACTGAAGTGGCCACCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS CCA 90 bp | AGCACGCCAGTTTCGGTACCTTGTCATCCTAGACTGGAACAGGCTTaGCCGTGCCTCCTCCGCGTCGCCGTCATCGTCGCCCGTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: STPVSVPCHPRLEQA*PCLLRVAVIVARVL Trigger: GAGGACACGGGCGACGATGACGGCGACGCGGAGGAGGCACGGCCAAGCCTGTTCCAGTCTAGGATGACAAGGTACCGAAACTGGCGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS CCA 90 bp | GCCACCCTAGCCACAAGACAGGGCTGTTCAGCCTCCCTGGGCTCCTaGCTGGTAGGGCTGAGGGCACACCCCTCAAGGTTGAGGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: ATLATRQGCSASLGS*LVGLRAHPSRLRAI Trigger: AATTGCCCTCAACCTTGAGGGGTGTGCCCTCAGCCCTACCAGCCAGGAGCCCAGGGAGGCTGAACAGCCCTGTCTTGTGGCTAGGGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CAA 90 bp | CAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCGGCTCCACCTGGCTTTaGGGGTCCTCTGGCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: QHCGAPRRANNRALGQKPGSTWL*GSSGST Trigger: GGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGAGCC...GGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CAA 90 bp | ACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTACTGAACCTCCGCAGCTaGTCACGGGGCCCCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: TKKSQQQSSGTETPCSGLLNLRS*SRGPQT Trigger: TGTCTGGGGGCCCCGTGACAAGCTGCGGAGGTTCAG...TAGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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| CDS-3UTR CAA 90 bp | AAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTAATTAGGGCCCCACCTGGCCTTTaGGGTCCTCTGGCCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KSQQQSSGTETPCSGLIRAPPGL*GPLAPP Trigger: AGGTGGGGCCAGAGGACCCAAAAGGCCAGGTGGGGC...CCTAATTAGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 90 bp | AGCGCACGGCAAACAGGAAGTAGTCCAGGGCACTCTGGCGAACGCTaGGCAGTTTGTGCTGTACTAGGGTCTCCTCCAGGAAGAAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SARQTGSSPGHSGER*AVCAVLGSPPGRSA Trigger: TGCGCTTCTTCCTGGAGGAGACCCTAGTACAGCACAAACTGCCCAGCGTTCGCCAGAGTGCCCTGGACTACTTCCTGTTTGCCGTGCGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | GCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCCTGTGGCTGTTGAGATaGTGGAAGCGTGGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ALWGTKKSQQQSSGTETPLWLLR*WKRGWK Trigger: CTTCCAGCCACGCTTCCACAATCTCAACAGCCACAG...GGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | CACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGTGGGCTAGCTCGCCCAGCGACTaGAGGATGCGTGTAATACGC | + |
|
Preference number: 5 (lower is better) Translates to: HQEEPTTELWDRNPLQWASSPSD*RMRVIR Trigger: GCGTATTACACGCATCCTCAAGTCGCTGGGCGAGCT...AGCCCACTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCATCCCCGGCTCCACCTGGCTTTaGGGGTCCTCTGGCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FIQKRPHLAPDEEKRPIPGSTWL*GSSGPT Trigger: GGTGGGGCCAGAGGACCCCAAAAGCCAGGTGGAGCC...GGGGATGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCATCCCCGGCCCCACCTGGCTTTaGGGGTCCTCTGGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FIQKRPHLAPDEEKRPIPGPTWL*GSSGST Trigger: GGTGGAGCCAGAGGACCCCAAAAGCCAGGTGGGGCC...GGGGATGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | GTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTGGGACAGAAACCCCCTGCAGGTTGTGCCGGTATCTTaGCATGTCCTGCATAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VGHQEEPTTELWDRNPLQVVPVS*HVLHST Trigger: CGTGCTATGCAGGACATGCAAAGATACCGGCACAAC...CTGCAGGGGGTTTCTGTCCCAGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 90 bp | CTCAACCTCCTTCAGTGTGAGGGGCTTGGCATGCCAGTTCACTCCTaGTTCCCTCAGGGGAAACAGCCACTGGATGTAGGAGTGATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNLLQCEGLGMPVHS*FPQGKQPLDVGVIL Trigger: GAGAATCACTCCTACATCCAGTGGCTGTTTCCCCTGAGGGAACCAGGAGTGAACTGGCATGCCAAGCCCCTCACACTGAAGGAGGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 90 bp | AATACGCAGATTGTTGTGGCTGTGGCTGTTGAGATTGTGGAAGCGTaGCTGGAAGTTCTGTGCACGGCATACGGCGCCTGTGTTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NTQIVVAVAVEIVEA*LEVLCTAYGACVPV Trigger: GACCGGAACACAGGCGCCGTATGCCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | ACCACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCCGTGTAATACGCAGATaGTTGTGGCTGTGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTRERPALWGTKKSQQQSRVIRR*LWLWLL Trigger: CAACAGCCACAGCCACAACAATCTGCGTATTACACG...GCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | ACTAGGGAGAGGCCAGCACTGTGGGGCACCAAGAAGAGCCAACAACAGAGCTCTCTCTTCTTGCTTTCTTaGGGACTCGGGGACTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRERPALWGTKKSQQQSSLFLLS*GLGDLA Trigger: GGCTAAGTCCCCGAGTCCCAAAGAAAGCAAGAAGAG...AGAGCTCTGTTGTTGGCTCTTCTTGGTGCCCCACAGTGCTGGCCTCTCCCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 90 bp | ATGCGTGTAATACGCAGATTGTTGTGGCTGTGGCTGTTGAGATTGTaGAAGCGTGGCTGGAAGTTCTGTGCACGGCATACGGCGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MRVIRRLLWLWLLRL*KRGWKFCARHTAPV Trigger: CACAGGCGCCGTATGCCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 90 bp | CCCAGCGACTTGAGGATGCGTGTAATACGCAGATTGTTGTGGCTGTaGCTGTTGAGATTGTGGAAGCGTGGCTGGAAGTTCTGTGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: PSDLRMRVIRRLLWL*LLRLWKRGWKFCAR Trigger: CCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAAGTCGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 90 bp | AGCTCGCCCAGCGACTTGAGGATGCGTGTAATACGCAGATTGTTGTaGCTGTGGCTGTTGAGATTGTGGAAGCGTGGCTGGAAGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSDLRMRVIRRLL*LWLLRLWKRGWKFC Trigger: ACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAAGTCGCTGGGCGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCCTAAAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAGCTCCACCTGGCCTTTaGGGTCCTCTGGCCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TKPKEFIQKRPHLAPDEEAPPGL*GPLAPP Trigger: AGGTGGGGCCAGAGGACCCAAAAGGCCAGGTGGAGC...TTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTTTAGGCTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCATCCCCCAGAGGCCTCAATCCTaGCCAACTCCTCTGACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FIQKRPHLAPDEEKRPIPQRPQS*PTPLTH Trigger: GTGAGTCAGAGGAGTTGGCAAGGATTGAGGCCTCTG...GGGGATGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCATCCCCCCACATCCTGGGGTTTaGCGCTCAACAGTGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FIQKRPHLAPDEEKRPIPPHPGV*RSTVRD Trigger: ATCTCTCACTGTTGAGCGCAAAACCCCAGGATGTGG...GGGGATGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCAGTTCCGGTCCTCAAGTaGGATCCCATAGAAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSLFRKGLTWHQTKKRGPVPVLK*DPIEAQ Trigger: CTGGGCTTCTATGGGATCCAACTTGAGGACCGGAAC...TGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGAAAAGGCCTCACTTGGCACCAGACGAAGAAAAGAGGCCCATCCCCTCCAACTTCCTCTTCTaGCTTTCTTTGGGACTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: FIQKRPHLAPDEEKRPIPSNFLF*LSLGLG Trigger: CCCGAGTCCCAAAGAAAGCAAGAAGAGGAAGTTGGA...GGGGATGGGCCTCTTTTCTTCGTCTGGTGCCAAGTGAGGCCTTTTCTGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS TCA 90 bp | CCAGGAGGTCATAGTTGTCTTTCCAGTTCTGAAGAATGTCCTCAATaGGAAAGCCATTTGGCTGGAAGCAGATCTCATTTTTGTAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGGHSCLSSSEECPQ*ESHLAGSRSHFCRS Trigger: GCTTCTACAAAAATGAGATCTGCTTCCAGCCAAATGGCTTTCTCATTGAGGACATTCTTCAGAACTGGAAAGACAACTATGACCTCCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS GCA 72 bp | AACTCTCGGCGAGGCTTGAAGTGCTCCCAAGCAAAGTaGACGAGCTCCCGGCGCTGGTGCCGGCAGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: NSRRGLKCSQAK*TSSRRWCRQRT Trigger: CGTGCGCTGCCGGCACCAGCGCCGGGAGCTCGTGCACTTTGCTTGGGAGCACTTCAAGCCTCGCCGAGAGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS GCA 72 bp | CGGGGCCCCCAGACAAACTCTCGGCGAGGCTTGAAGTaGTCCCAAGCAAAGTGCACGAGCTCCCGGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPQTNSRRGLK*SQAKCTSSRRW Trigger: CCAGCGCCGGGAGCTCGTGCACTTTGCTTGGGAGCACTTCAAGCCTCGCCGAGAGTTTGTCTGGGGGCCCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | GCCTGCCCTAGTCCCATCAGTGGCCGGGATATAGTCTaGGGCCTGAACCTCCGCAGCTTGTCACGGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ACPSPISGRDIV*GLNLRSLSRGP Trigger: GGGGCCCCGTGACAAGCTGCGGAGGTTCAGGCCCCAGACTATATCCCGGCCACTGATGGGACTAGGGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | GCCACAAGACAGGGCTGTTCAGCCTCCCTGGGCTCCTaGCTGGTAGGGCTGAGGGCACACCCCTCAAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATRQGCSASLGS*LVGLRAHPSRL Trigger: CAACCTTGAGGGGTGTGCCCTCAGCCCTACCAGCCAGGAGCCCAGGGAGGCTGAACAGCCCTGTCTTGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS TCA 72 bp | TGTCACGGGGCCCCCAGACAAACTCTCGGCGAGGCTTaGAGTGCTCCCAAGCAAAGTGCACGAGCTCCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CHGAPRQTLGEA*SAPKQSARAPG Trigger: GCCGGGAGCTCGTGCACTTTGCTTGGGAGCACTTCAAGCCTCGCCGAGAGTTTGTCTGGGGGCCCCGTGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS GCA 72 bp | GTACCTTGTCATCCTAGACTGGAACAGGCTTGGCCGTaGCTCCTCCGCGTCGCCGTCATCGTCGCCCGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPCHPRLEQAWP*LLRVAVIVARV Trigger: GACACGGGCGACGATGACGGCGACGCGGAGGAGGCACGGCCAAGCCTGTTCCAGTCTAGGATGACAAGGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | GTTTCGGTACCTTGTCATCCTAGACTGGAACAGGCTTaGCCGTGCCTCCTCCGCGTCGCCGTCATCGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSVPCHPRLEQA*PCLLRVAVIVA Trigger: GGCGACGATGACGGCGACGCGGAGGAGGCACGGCCAAGCCTGTTCCAGTCTAGGATGACAAGGTACCGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 72 bp | TTGTCACGGGGCCCCCAGACAAACTCTCGGCGAGGCTaGAAGTGCTCCCAAGCAAAGTGCACGAGCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRGPQTNSRRG*KCSQAKCTSSR Trigger: CCGGGAGCTCGTGCACTTTGCTTGGGAGCACTTCAAGCCTCGCCGAGAGTTTGTCTGGGGGCCCCGTGACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | ATAGCACGCCAGTTTCGGTACCTTGTCATCCTAGACTaGAACAGGCTTGGCCGTGCCTCCTCCGCGTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IARQFRYLVILD*NRLGRASSASP Trigger: CGGCGACGCGGAGGAGGCACGGCCAAGCCTGTTCCAGTCTAGGATGACAAGGTACCGAAACTGGCGTGCTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 90 bp | GAAGTTCTGTGCACGGCATACGGCGCCTGTGTTCCGGTCCTCAAGTaGGATCCCATAGAAGCCCAGCATGAGCTCATAGGCCCGGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: EVLCTAYGACVPVLK*DPIEAQHELIGPDK Trigger: CTTGTCCGGGCCTATGAGCTCATGCTGGGCTTCTATGGGATCCAACTTGAGGACCGGAACACAGGCGCCGTATGCCGTGCACAGAACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS TCA 72 bp | TGGCCCATTCCCATCCTTTTGGGACTCAGGACACTCTaGAGGGGTAGGAGACAGGGCACTGGCCTGCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: WPIPILLGLRTL*RGRRQGTGLHL Trigger: CAAGTGCAGGCCAGTGCCCTGTCTCCTACCCCTTCAGAGTGTCCTGAGTCCCAAAAGGATGGGAATGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 72 bp | TGCACGGCATACGGCGCCTGTGTTCCGGTCCTCAAGTaGGATCCCATAGAAGCCCAGCATGAGCTCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CTAYGACVPVLK*DPIEAQHELIG Trigger: GCCTATGAGCTCATGCTGGGCTTCTATGGGATCCAACTTGAGGACCGGAACACAGGCGCCGTATGCCGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS TCA 72 bp | TCTGAAGGGGTAGGAGACAGGGCACTGGCCTGCACTTaGGTGTTACTGGCTACTCCATCACCCTCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SEGVGDRALACT*VLLATPSPSAP Trigger: AGGAGCTGAGGGTGATGGAGTAGCCAGTAACACTCAAGTGCAGGCCAGTGCCCTGTCTCCTACCCCTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | TTGTGGCTGTGGCTGTTGAGATTGTGGAAGCGTGGCTaGAAGTTCTGTGCACGGCATACGGCGCCTGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LWLWLLRLWKRG*KFCARHTAPVF Trigger: GAACACAGGCGCCGTATGCCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | CAAACAGGAAGTAGTCCAGGGCACTCTGGCGAACGCTaGGCAGTTTGTGCTGTACTAGGGTCTCCTCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QTGSSPGHSGER*AVCAVLGSPPG Trigger: TCCTGGAGGAGACCCTAGTACAGCACAAACTGCCCAGCGTTCGCCAGAGTGCCCTGGACTACTTCCTGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 90 bp | CCCAGCTCGCCCAGCGACTTGAGGATGCGTGTAATACGCAGATTGTaGTGGCTGTGGCTGTTGAGATTGTGGAAGCGTGGCTGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSPSDLRMRVIRRL*WLWLLRLWKRGWKF Trigger: GAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAAGTCGCTGGGCGAGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 90 bp | AAGCCCAGCTCGCCCAGCGACTTGAGGATGCGTGTAATACGCAGATaGTTGTGGCTGTGGCTGTTGAGATTGTGGAAGCGTGGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KPSSPSDLRMRVIRR*LWLWLLRLWKRGWK Trigger: CTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAAGTCGCTGGGCGAGCTGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | ATTGTTGTGGCTGTGGCTGTTGAGATTGTGGAAGCGTaGCTGGAAGTTCTGTGCACGGCATACGGCGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IVVAVAVEIVEA*LEVLCTAYGAC Trigger: ACAGGCGCCGTATGCCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 90 bp | AGGATGCGTGTAATACGCAGATTGTTGTGGCTGTGGCTGTTGAGATaGTGGAAGCGTGGCTGGAAGTTCTGTGCACGGCATACGGCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RMRVIRRLLWLWLLR*WKRGWKFCARHTAP Trigger: AGGCGCCGTATGCCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS GCA 72 bp | TTCTTGCTTTCTTTGGGACTCGGGGACTTAGCCTCATaGCTTTGGTCCCCATCCAAGGTTCCCACATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLLSLGLGDLAS*LWSPSKVPTSW Trigger: CCAGGATGTGGGAACCTTGGATGGGGACCAAAGGCATGAGGCTAAGTCCCCGAGTCCCAAAGAAAGCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 72 bp | CCCAGCGACTTGAGGATGCGTGTAATACGCAGATTGTaGTGGCTGTGGCTGTTGAGATTGTGGAAGCGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSDLRMRVIRRL*WLWLLRLWKRG Trigger: GCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAAGTCGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 72 bp | TCGCCCAGCGACTTGAGGATGCGTGTAATACGCAGATaGTTGTGGCTGTGGCTGTTGAGATTGTGGAAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSDLRMRVIRR*LWLWLLRLWKR Trigger: ACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAAGTCGCTGGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS GCA 72 bp | GACAAGACGCTCTCTGACTTCCTTGGAGCTTTTAAATaGCTCAACCTCCTTCAGTGTGAGGGGCTTGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: DKTLSDFLGAFK*LNLLQCEGLGM Trigger: CATGCCAAGCCCCTCACACTGAAGGAGGTTGAGGCATTTAAAAGCTCCAAGGAAGTCAGAGAGCGTCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 72 bp | GTAATACGCAGATTGTTGTGGCTGTGGCTGTTGAGATaGTGGAAGCGTGGCTGGAAGTTCTGTGCACGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VIRRLLWLWLLR*WKRGWKFCARH Trigger: ATGCCGTGCACAGAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 90 bp | GTTGCAGTCTTGATCTGTCAAATCCGGGTAGTTGTGCCGGTATCTTaGCATGTCCTGCATAGCACGCCAGTTTCGGTACCTTGTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VAVLICQIRVVVPVS*HVLHSTPVSVPCHP Trigger: AGGATGACAAGGTACCGAAACTGGCGTGCTATGCAGGACATGCAAAGATACCGGCACAACTACCCGGATTTGACAGATCAAGACTGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CCA 72 bp | TTGAGGATGCGTGTAATACGCAGATTGTTGTGGCTGTaGCTGTTGAGATTGTGGAAGCGTGGCTGGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRMRVIRRLLWL*LLRLWKRGWKF Trigger: GAACTTCCAGCCACGCTTCCACAATCTCAACAGCCACAGCCACAACAATCTGCGTATTACACGCATCCTCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS CAA 72 bp | TTGATCTGTCAAATCCGGGTAGTTGTGCCGGTATCTTaGCATGTCCTGCATAGCACGCCAGTTTCGGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: LICQIRVVVPVS*HVLHSTPVSVP Trigger: AGGTACCGAAACTGGCGTGCTATGCAGGACATGCAAAGATACCGGCACAACTACCCGGATTTGACAGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS GCA 72 bp | GCTGGAAGCAGATCTCATTTTTGTAGAAGCTCAGGTTaGACATGTCTCCGTTGCAGTCTTGATCTGTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: AGSRSHFCRSSG*TCLRCSLDLSN Trigger: ATTTGACAGATCAAGACTGCAACGGAGACATGTGCAACCTGAGCTTCTACAAAAATGAGATCTGCTTCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
||
| CDS TCA 72 bp | CATAGTTGTCTTTCCAGTTCTGAAGAATGTCCTCAATaGGAAAGCCATTTGGCTGGAAGCAGATCTCATTTT | + |
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Preference number: 6 (lower is better) Translates to: HSCLSSSEECPQ*ESHLAGSRSHF Trigger: AAAATGAGATCTGCTTCCAGCCAAATGGCTTTCTCATTGAGGACATTCTTCAGAACTGGAAAGACAACTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029087.4 |
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