RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OGFOD3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025169

Ensembl transcript IDs: ENSMUST00000026169.7

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 72 bp ACATTGAGCAGCAGCAATGGCCTGAAGTGGGAGAGATaGACACACCCTCCACCCGGCCTAGGAGTGCCTTCT +
Preference number: 3 (lower is better)
Translates to: TLSSSNGLKWER*THPPPGLGVPS
Trigger: AGAAGGCACTCCTAGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTGCTCAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR TCA 90 bp CAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTAGGTCCAGAGCAGACATGTaGCCAGAGCAAGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: QQQWPEVGEMNTPSTRPRSRADM*PEQGRP
Trigger: GGGTCGGCCTTGCTCTGGTCACATGTCTGCTCTGGA...CCTAGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR GCA 90 bp TCCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAGGACCTGACGTACTGGGTCCTCGATaGCGTGGTCCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: STRPRSAFSDRTWYSGPDVLGPR*RGPGCR
Trigger: CCTGCAACCCGGACCACGGCATCGAGGACCCAGTAC...GTCAGGTCCTGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR GCA 90 bp GAGCAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTGCTATTCTGCGAATCTaGTCCGCCTCCTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EQQQWPEVGEMNTPSTRPAILRI*SASSLV
Trigger: CACCAGGGAGGAGGCGGAGCAGATTCGCAGAATAGC...AGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR TCA 90 bp ACACCCTCCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAGGAAAGCTTCCGCGATGGTaGGCTGGACCTTCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: TPSTRPRSAFSDRTWYSGKLPRW*AGPSAE
Trigger: TTCGGCAGAAGGTCCAGCTCACCATCGCGGAAGCTT...TCCTGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGGAGGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR TCA 90 bp GAGCAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTTGCCAGTACTCATCATaGGCTGTCCGGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: EQQQWPEVGEMNTPSTRPCQYSS*AVRASV
Trigger: CACAGAAGCCCGGACAGCTCATGATGAGTACTGGCA...AGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR GCA 90 bp CAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTAGGGACAAGGCTCCAGAGTaGAGGTCCAGGATAGATGCC +
Preference number: 4 (lower is better)
Translates to: QQQWPEVGEMNTPSTRPRDKAPE*RSRIDA
Trigger: GGCATCTATCCTGGACCTGCACTCTGGAGCCTTGTC...CCTAGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR CCA 90 bp CCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAGGACCTGACCAGACTCGACCAGCTCTaGGCTCCACTGTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: PPGLGVPSLTGHGTQDLTRLDQL*APLSCW
Trigger: CCAACAAGACAGTGGAGCCCAGAGCTGGTCGAGTCT...GGTCAGGTCCTGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR TCA 90 bp CAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTAGGAGCAGGGAACCTCAATaGACCTGCCTTCTAGGACCT +
Preference number: 4 (lower is better)
Translates to: QQQWPEVGEMNTPSTRPRSREPQ*TCLLGP
Trigger: AGGTCCTAGAAGGCAGGTTCATTGAGGTTCCCTGCT...CCTAGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR TCA 90 bp TCCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAGGACCTGACTGGACCCTTCTTCCATaGACACAAAGCGCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: STRPRSAFSDRTWYSGPDWTLLP*TQSALH
Trigger: GTGGAGGGCGCTTTGTGTTCATGGAAGAAGGGTCCA...GTCAGGTCCTGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR GCA 90 bp CCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAGGACCTGACCCACCTTGTCCACGTGTaGGTGCCAGTACTCATCATG +
Preference number: 4 (lower is better)
Translates to: PPGLGVPSLTGHGTQDLTHLVHV*VPVLIM
Trigger: CATGATGAGTACTGGCACGCACACGTGGACAAGGTG...GGTCAGGTCCTGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR GCA 90 bp CACCCTCCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAGGACACTTTCTCCACTCGGTaGAGGTTCTCAGAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HPPPGLGVPSLTGHGTQDTFSTR*RFSEPE
Trigger: CTCAGGCTCTGAGAACCTGCACCGAGTGGAGAAAGT...GTCCTGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGGAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR CCA 90 bp AGGCACATTGAGCAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCTCCGCGATGGTGAGCTaGACCTTCTGCCGAATGTCC +
Preference number: 4 (lower is better)
Translates to: RHIEQQQWPEVGEMNTPSSAMVS*TFCRMS
Trigger: GGACATTCGGCAGAAGGTCCAGCTCACCATCGCGGA...GGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTGCTCAATGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR GCA 90 bp AGGCACATTGAGCAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCCAGGTACAGCAAGGATaGACTGATGCCGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: RHIEQQQWPEVGEMNTPSQVQQG*TDAESF
Trigger: GAAGCTTTCGGCATCAGTGCATCCTTGCTGTACCTG...GGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTGCTCAATGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR TCA 90 bp AACACACCCTCCACCCGGCCTAGGAGTGCCTTCTCTGACAGGACATGGTACTCAATGTCCCTATATAACTaGAAGTCCTCCTCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTPSTRPRSAFSDRTWYSMSLYN*KSSSEK
Trigger: CTTCTCTGAGGAGGACTTTCAGTTATATAGGGACAT...TGAGTACCATGTCCTGTCAGAGAAGGCACTCCTAGGCCGGGTGGAGGGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS CCA 90 bp TCCTTAGCCATGTCCTCTGTGCCTCCCGAGGCAGCCGGTCCTTCTTaGTACTGGTCGCGCGCCGGCGCTCTGCAGCACTACTTCCCTCGG +
Preference number: 5 (lower is better)
Translates to: SLAMSSVPPEAAGPS*YWSRAGALQHYFPR
Trigger: CCGAGGGAAGTAGTGCTGCAGAGCGCCGGCGCGCGACCAGTACCAAGAAGGACCGGCTGCCTCGGGAGGCACAGAGGACATGGCTAAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR CAA 90 bp CAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTAGGCTGGGCTCCACTGTCTaGTTGGACCCTTCTTCCATG +
Preference number: 5 (lower is better)
Translates to: QQQWPEVGEMNTPSTRPRLGSTV*LDPSSM
Trigger: CATGGAAGAAGGGTCCAACAAGACAGTGGAGCCCAG...CCTAGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS-3UTR CAA 90 bp CAGCAGCAATGGCCTGAAGTGGGAGAGATGAACACACCCTCCACCCGGCCTAGGGGCTCCACTGTCTTGTaGGACCCTTCTTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: QQQWPEVGEMNTPSTRPRGSTVL*DPSSMN
Trigger: GTTCATGGAAGAAGGGTCCAACAAGACAGTGGAGCC...CCTAGGCCGGGTGGAGGGTGTGTTCATCTCTCCCACTTCAGGCCATTGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS TCA 90 bp CAAACCTTCGGTGACCATCGTAGTCCTCAGAGCAGGGAACCTCAATaGACCTGCCTTCTAGGACCTCACCACGACGGGCCACAACCTCAG +
Preference number: 5 (lower is better)
Translates to: QTFGDHRSPQSREPQ*TCLLGPHHDGPQPQ
Trigger: CTGAGGTTGTGGCCCGTCGTGGTGAGGTCCTAGAAGGCAGGTTCATTGAGGTTCCCTGCTCTGAGGACTACGATGGTCACCGAAGGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS GCA 90 bp TCCGATCCACCTAGGGAGAGCCCTTTCTCTGCTATTCTGCGAATCTaGTCCGCCTCCTCCCTGGTGATGACGATGTCAGTGACACCTCTG +
Preference number: 5 (lower is better)
Translates to: SDPPRESPFSAILRI*SASSLVMTMSVTPL
Trigger: CAGAGGTGTCACTGACATCGTCATCACCAGGGAGGAGGCGGAGCAGATTCGCAGAATAGCAGAGAAAGGGCTCTCCCTAGGTGGATCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS TCA 90 bp CAGCAACATCATCATCGATCCCCACACTACTCCAGAGCAGACATGTaGCCAGAGCAAGGCCGACCCCAAAGGCCACAATCCTTAGCCATG +
Preference number: 5 (lower is better)
Translates to: QQHHHRSPHYSRADM*PEQGRPQRPQSLAM
Trigger: CATGGCTAAGGATTGTGGCCTTTGGGGTCGGCCTTGCTCTGGTCACATGTCTGCTCTGGAGTAGTGTGGGGATCGATGATGATGTTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS TCA 90 bp CTCGACCAGCTCTGGGCTCCACTGTCTTGTTGGACCCTTCTTCCATaGACACAAAGCGCCCTCCACCGAAGTCCTCTAAGTAATCCGATA +
Preference number: 5 (lower is better)
Translates to: LDQLWAPLSCWTLLP*TQSALHRSPLSNPI
Trigger: TATCGGATTACTTAGAGGACTTCGGTGGAGGGCGCTTTGTGTTCATGGAAGAAGGGTCCAACAAGACAGTGGAGCCCAGAGCTGGTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS GCA 90 bp ATTTATTCGCGAGAAAAATGTGGGCTTCGTCAGGTACAGCAAGGATaGACTGATGCCGAAAGCTTCCGCGATGGTGAGCTGGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: IYSREKCGLRQVQQG*TDAESFRDGELDLL
Trigger: CAGAAGGTCCAGCTCACCATCGCGGAAGCTTTCGGCATCAGTGCATCCTTGCTGTACCTGACGAAGCCCACATTTTTCTCGCGAATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS CAA 90 bp ATCCTTAGCCATGTCCTCTGTGCCTCCCGAGGCAGCCGGTCCTTCTaGGTACTGGTCGCGCGCCGGCGCTCTGCAGCACTACTTCCCTCG +
Preference number: 6 (lower is better)
Translates to: ILSHVLCASRGSRSF*VLVARRRSAALLPS
Trigger: CGAGGGAAGTAGTGCTGCAGAGCGCCGGCGCGCGACCAGTACCAAGAAGGACCGGCTGCCTCGGGAGGCACAGAGGACATGGCTAAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS TCA 72 bp GGTGACCATCGTAGTCCTCAGAGCAGGGAACCTCAATaGACCTGCCTTCTAGGACCTCACCACGACGGGCCA +
Preference number: 6 (lower is better)
Translates to: GDHRSPQSREPQ*TCLLGPHHDGP
Trigger: TGGCCCGTCGTGGTGAGGTCCTAGAAGGCAGGTTCATTGAGGTTCCCTGCTCTGAGGACTACGATGGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS TCA 72 bp CATCATCGATCCCCACACTACTCCAGAGCAGACATGTaGCCAGAGCAAGGCCGACCCCAAAGGCCACAATCC +
Preference number: 6 (lower is better)
Translates to: HHRSPHYSRADM*PEQGRPQRPQS
Trigger: GGATTGTGGCCTTTGGGGTCGGCCTTGCTCTGGTCACATGTCTGCTCTGGAGTAGTGTGGGGATCGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS GCA 72 bp CCTAGGGAGAGCCCTTTCTCTGCTATTCTGCGAATCTaGTCCGCCTCCTCCCTGGTGATGACGATGTCAGTG +
Preference number: 6 (lower is better)
Translates to: PRESPFSAILRI*SASSLVMTMSV
Trigger: CACTGACATCGTCATCACCAGGGAGGAGGCGGAGCAGATTCGCAGAATAGCAGAGAAAGGGCTCTCCCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS GCA 72 bp GTAGTCAAAAGAGCCGTAGGTCACCTTGTCCACGTGTaGGTGCCAGTACTCATCATGAGCTGTCCGGGCTTC +
Preference number: 6 (lower is better)
Translates to: VVKRAVGHLVHV*VPVLIMSCPGF
Trigger: GAAGCCCGGACAGCTCATGATGAGTACTGGCACGCACACGTGGACAAGGTGACCTACGGCTCTTTTGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS CAA 90 bp GAGGTAAAGAATGAGACTCGACCAGCTCTGGGCTCCACTGTCTTGTaGGACCCTTCTTCCATGAACACAAAGCGCCCTCCACCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: EVKNETRPALGSTVL*DPSSMNTKRPPPKS
Trigger: GGACTTCGGTGGAGGGCGCTTTGTGTTCATGGAAGAAGGGTCCAACAAGACAGTGGAGCCCAGAGCTGGTCGAGTCTCATTCTTTACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS CAA 90 bp CCTGAGGTAAAGAATGAGACTCGACCAGCTCTGGGCTCCACTGTCTaGTTGGACCCTTCTTCCATGAACACAAAGCGCCCTCCACCGAAG +
Preference number: 6 (lower is better)
Translates to: PEVKNETRPALGSTV*LDPSSMNTKRPPPK
Trigger: CTTCGGTGGAGGGCGCTTTGTGTTCATGGAAGAAGGGTCCAACAAGACAGTGGAGCCCAGAGCTGGTCGAGTCTCATTCTTTACCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS GCA 72 bp CGAGAAAAATGTGGGCTTCGTCAGGTACAGCAAGGATaGACTGATGCCGAAAGCTTCCGCGATGGTGAGCTG +
Preference number: 6 (lower is better)
Translates to: REKCGLRQVQQG*TDAESFRDGEL
Trigger: CAGCTCACCATCGCGGAAGCTTTCGGCATCAGTGCATCCTTGCTGTACCTGACGAAGCCCACATTTTTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS CAA 72 bp AATGAGACTCGACCAGCTCTGGGCTCCACTGTCTTGTaGGACCCTTCTTCCATGAACACAAAGCGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: NETRPALGSTVL*DPSSMNTKRPP
Trigger: TGGAGGGCGCTTTGTGTTCATGGAAGAAGGGTCCAACAAGACAGTGGAGCCCAGAGCTGGTCGAGTCTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7
CDS CAA 72 bp AAGAATGAGACTCGACCAGCTCTGGGCTCCACTGTCTaGTTGGACCCTTCTTCCATGAACACAAAGCGCCCT +
Preference number: 6 (lower is better)
Translates to: KNETRPALGSTV*LDPSSMNTKRP
Trigger: AGGGCGCTTTGTGTTCATGGAAGAAGGGTCCAACAAGACAGTGGAGCCCAGAGCTGGTCGAGTCTCATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000026169.7