Pregenerated sensors for OGFOD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023707Ensembl transcript IDs: ENSMUST00000024470.13, ENSMUST00000119269.6, ENSMUST00000196627.5, ENSMUST00000198505.2, ENSMUST00000198770.2, ENSMUST00000199457.5
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGACGAGGTTCCAGCGCTCTCCCTTACACAGGGGCCGAGCCCCGTaGAGCTGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATGC | + |
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Preference number: 1 (lower is better) Translates to: TTRFQRSPLHRGRAP*SWPPRCRIPEPTTC Trigger: GCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGGGAGAGCGCTGGAACCTCGTCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR CCA 90 bp | AGGTTCCAGCGCTCTCCCTTACACAGGGGCCGAGCCCCGTGCAGCTaGCCGCCACGGTGCAGGATACCAGAGCCCACCACATGCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: RFQRSPLHRGRAPCS*PPRCRIPEPTTCST Trigger: AGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGGGAGAGCGCTGGAACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR GCA 90 bp | CCGTGCAGCTGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATaGTCCACTTCCAGGGTCTCCTTCAAGGCTGCGGGTGCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PCSWPPRCRIPEPTT*STSRVSFKAAGAWK Trigger: CTTCCAGGCACCCGCAGCCTTGAAGGAGACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR CCA 90 bp | GACCACAAAGGCACGGTGACTGTCGAGGTAGCCCCCACCGTAGTCTaGGTACAACAAGGCCATCAGTGGCAGCAGGAAGCGTTCCCGCAG | + |
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Preference number: 1 (lower is better) Translates to: DHKGTVTVEVAPTVV*VQQGHQWQQEAFPQ Trigger: CTGCGGGAACGCTTCCTGCTGCCACTGATGGCCTTGTTGTACCCAGACTACGGTGGGGGCTACCTCGACAGTCACCGTGCCTTTGTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR GCA 90 bp | TGGCTTCTGGCAGCACATGGGACAGAGGCGATTTCGAACAGCAGATaGCCGCAGCCACACGACGAGGTTCCAGCGCTCTCCCTTACACAG | + |
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Preference number: 1 (lower is better) Translates to: WLLAAHGTEAISNSR*PQPHDEVPALSLTQ Trigger: CTGTGTAAGGGAGAGCGCTGGAACCTCGTCGTGTGGCTGCGGGCATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR CCA 90 bp | CACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCTGGCAGCACATaGGACAGAGGCGATTTCGAACAGCAGATGCCCGCAGCCACACGA | + |
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Preference number: 1 (lower is better) Translates to: HRNPHRPPALASGST*DRGDFEQQMPAATR Trigger: TCGTGTGGCTGCGGGCATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR TCA 90 bp | TATCGTAGTGACAGCCCAGATCCAGGTCCTGGCCCAGTGCGTACTTaGCCACAAAGGCACGGTGACTGTCGAGGTAGCCCCCACCGTAGT | + |
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Preference number: 1 (lower is better) Translates to: YRSDSPDPGPGPVRT*PQRHGDCRGSPHRS Trigger: ACTACGGTGGGGGCTACCTCGACAGTCACCGTGCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGGCTGTCACTACGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR GCA 90 bp | CTCAGCATTATCGTAGTGACAGCCCAGATCCAGGTCCTGGCCCAGTaGGTACTTGACCACAAAGGCACGGTGACTGTCGAGGTAGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: LSIIVVTAQIQVLAQ*VLDHKGTVTVEVAP Trigger: GGGGGCTACCTCGACAGTCACCGTGCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGGCTGTCACTACGATAATGCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR CCA 90 bp | GTAAAGCCGTCACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCTaGCAGCACATGGGACAGAGGCGATTTCGAACAGCAGATGCCCGC | + |
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Preference number: 1 (lower is better) Translates to: VKPSPKPSSSTSSGF*QHMGQRRFRTADAR Trigger: GCGGGCATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTGACGGCTTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR CCA 90 bp | CTCCCGGGTAAAGCCGTCACCGAAACCCTCATCGTCCACCAGCTCTaGCTTCTGGCAGCACATGGGACAGAGGCGATTTCGAACAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LPGKAVTETLIVHQL*LLAAHGTEAISNSR Trigger: TCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTGACGGCTTTACCCGGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR TCA 90 bp | ACCCTCCCTCCTCAGTCAGAGCTCCCTAGGGGTCATGTCTTTTCCTaGCTTCTTCTCTTCCTGGGCCTGCTCCACTCCAAACCCTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: TLPPQSELPRGHVFS*LLLFLGLLHSKPSV Trigger: TACTGAGGGTTTGGAGTGGAGCAGGCCCAGGAAGAGAAGAAGTCAGGAAAAGACATGACCCCTAGGGAGCTCTGACTGAGGAGGGAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR CCA 90 bp | GAGTGGCACGGCTGCAGACTTTATTTCTGCCCTCCCTGCCCACAATaGCAAGTTTTCAGCATCAACACCTCTGGGGGAGAACCAGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: EWHGCRLYFCPPCPQ*QVFSINTSGGEPGS Trigger: TGAGCCTGGTTCTCCCCCAGAGGTGTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCAGCCGTGCCACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
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| 3UTR TCA 90 bp | CAGATCACCTGTCCAAAGAATGACCCAAAAGTCTGCGTGTCCTTTTaGCCCAAGGAGTGGCACGGCTGCAGACTTTATTTCTGCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: QITCPKNDPKVCVSF*PKEWHGCRLYFCPP Trigger: GGGAGGGCAGAAATAAAGTCTGCAGCCGTGCCACTCCTTGGGTCAAAAGGACACGCAGACTTTTGGGTCATTCTTTGGACAGGTGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR CCA 90 bp | CAGAGCTCCCTAGGGGTCATGTCTTTTCCTGACTTCTTCTCTTCCTaGGCCTGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAG | + |
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Preference number: 1 (lower is better) Translates to: QSSLGVMSFPDFFSS*ACSTPNPQYFISNK Trigger: CTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCAGGCCCAGGAAGAGAAGAAGTCAGGAAAAGACATGACCCCTAGGGAGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR GCA 90 bp | GCCTGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTaGTACAGATCACCTGTCCAAAGAATGACCCAAAAGTCTGCGTGT | + |
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Preference number: 1 (lower is better) Translates to: ACSTPNPQYFISNKA*YRSPVQRMTQKSAC Trigger: ACACGCAGACTTTTGGGTCATTCTTTGGACAGGTGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR GCA 90 bp | GCCCCGTGCAGCTGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATGCTCCCTTCAAGGCTGCGGGTaGCTGGAAGAGGCCCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: APCSWPPRCRIPEPTTCSLQGCG*LEEAPK Trigger: TTTGGGGGCCTCTTCCAGGCACCCGCAGCCTTGAAG...GGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTACACAGGGGCCGAGCCCCGTGCAGCTGGCCGCCACGGTGCAGGATACCAGACCAGCTCTGGCTTCTaGCAGCACATGGGACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PYTGAEPRAAGRHGAGYQTSSGF*QHMGQR Trigger: CCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGT...CTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGCCCACCACATGCTCCACTTCCAGGGTCTCCTTCAAGGCTGCGGGTGCCTGAGCTGGCCGCCACGGTaGAGGATACCAGAGCCCACC | + |
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Preference number: 2 (lower is better) Translates to: RAHHMLHFQGLLQGCGCLSWPPR*RIPEPT Trigger: GGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCT...CAGGCACCCGCAGCCTTGAAGGAGACCCTGGAAGTGGAGCATGTGGTGGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACATGGGACAGAGGCGATTTCGAACAGCAGATGCCCGCAGCCACACGACGACGAGCCCCGTGCAGCTaGCCGCCACGGTGCAGGATA | + |
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Preference number: 2 (lower is better) Translates to: STWDRGDFEQQMPAATRRRAPCS*PPRCRI Trigger: TATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCG...TCGTCGTGTGGCTGCGGGCATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATGCTCCACTTCCAGGGTCCAGGTCCTGGCCCAGTaGGTACTTGACCACAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: WPPRCRIPEPTTCSTSRVQVLAQ*VLDHKG Trigger: GCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTG...GACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTGGGCTCCTCCCGGGTAAAGCCGTCACCGAAACCCTCATCGTCCACCAGATCGTCCACCAGCTCTaGCTTCTGGCAGCACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: CGGLLPGKAVTETLIVHQIVHQL*LLAAHG Trigger: CCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGAT...CTGGTGGACGATGAGGGTTTCGGTGACGGCTTTACCCGGGAGGAGCCCACCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCCGGGTAAAGCCGTCACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCCCAGATCCAGGTCCTaGCCCAGTGCGTACTTGACC | + |
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Preference number: 2 (lower is better) Translates to: LLPGKAVTETLIVHQLWLPRSRS*PSAYLT Trigger: GGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGG...AAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTGACGGCTTTACCCGGGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGTCACCACAACCAGGGCGCTAGGGAGTCCAGAGCCCCACTGCTGGACATGCTATCTCTGAGCCACTaGCTGAAGCAACCCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: DCHHNQGARESRAPLLDMLSLSH*LKQPSL Trigger: GAGGGAGGGTTGCTTCAGTCAGTGGCTCAGAGATAG...CATGTCCAGCAGTGGGGCTCTGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR CCA 90 bp | GCCACGGTGCAGGATACCAGAGCCCACCACATGCTCCACTTCCAGGGTCTCCTTAAGGCTGCGGGTGCCTaGAAGAGGCCCCCAAAATAC | + |
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Preference number: 2 (lower is better) Translates to: ATVQDTRAHHMLHFQGLLKAAGA*KRPPKY Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCGCAGCCTT...AAGGAGACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAACCAGGCTCAAGTCAACACACAGACATCCACTGTGGTGGGCTCCTCCCGGATCGTCCACCAGCTCTaGCTTCTGGCAGCACATGGG | + |
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Preference number: 2 (lower is better) Translates to: ENQAQVNTQTSTVVGSSRIVHQL*LLAAHG Trigger: CCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGAT...CCGGGAGGAGCCCACCACAGTGGATGTCTGTGTGTTGACTTGAGCCTGGTTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
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| 3UTR-3UTR CCA 90 bp | CACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCTGGCAGCACATGGGACAGACAACAAGGCCATCAGTaGCAGCAGGAAGCGTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: HRNPHRPPALASGSTWDRQQGHQ*QQEAFP Trigger: CGGGAACGCTTCCTGCTGCCACTGATGGCCTTGTTG...TCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR-3UTR GCA 90 bp | CACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCTGGCAGCACATGGGACAGATGCAGACTTTATTTCTaGCCTCCCTGCCCACAATGG | + |
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Preference number: 2 (lower is better) Translates to: HRNPHRPPALASGSTWDRCRLYF*PPCPQW Trigger: CCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCA...TCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
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| 3UTR-3UTR CCA 90 bp | GATGTGAACCCAGAAAGTCTGAATCCCCGCCCCCAATCCTCCGCTCTCCAGCACCCTCCCTGCCCACAATaGCAAGTTTTCAGCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: DVNPESLNPRPQSSALQHPPCPQ*QVFSIN Trigger: GTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGG...GTGCTGGAGAGCGGAGGATTGGGGGCGGGGATTCAGACTTTCTGGGTTCACATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR CCA 90 bp | CGGCTGCAGACTTTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGCATGACTTCTTCTCTTCCTaGGCCTGCTCCACTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: RLQTLFLPSLPTMASFQHDFFSS*ACSTPN Trigger: GTTTGGAGTGGAGCAGGCCCAGGAAGAGAAGAAGTC...ATGCTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGCCCCACTGCTGGACATGCAAAACACAGATGTGAACCCAGAAAGTCTGCCTCCCTGCCCACAATaGCAAGTTTTCAGCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: SRAPLLDMQNTDVNPESLPPCPQ*QVFSIN Trigger: GTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGG...CAGACTTTCTGGGTTCACATCTGTGTTTTGCATGTCCAGCAGTGGGGCTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR GCA 90 bp | CCTATCTCTGAGCCACTGACTGAAGCAACCCTCCCTCCTCAGTCAGAGCTCCCTATCTCAAATAAGGCTTaGTACAGATCACCTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PISEPLTEATLPPQSELPISNKA*YRSPVQ Trigger: TTGGACAGGTGATCTGTAGCAAGCCTTATTTGAGAT...AGGGAGCTCTGACTGAGGAGGGAGGGTTGCTTCAGTCAGTGGCTCAGAGATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGAGACTTCTTCTCTTCCTaGGCCTGCTCCACTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: ACSTPNPQYFISNKACYRDFFSS*ACSTPN Trigger: GTTTGGAGTGGAGCAGGCCCAGGAAGAGAAGAAGTC...TCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR GCA 90 bp | GCCTGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGAAAGGAGTGGCACGGCTaGAGACTTTATTTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ACSTPNPQYFISNKACYRKEWHG*RLYFCP Trigger: AGGGCAGAAATAAAGTCTGCAGCCGTGCCACTCCTT...TCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR-3UTR GCA 90 bp | TCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGATCACCTTATTTCTGCCCTCCCTaGCCACAATGGCAAGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: STPNPQYFISNKACYRSPYFCPP*PQWQVF Trigger: GAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATA...AGGTGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR GCA 72 bp | TTCCAGCGCTCTCCCTTACACAGGGGCCGAGCCCCGTaGAGCTGGCCGCCACGGTGCAGGATACCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FQRSPLHRGRAP*SWPPRCRIPEP Trigger: GGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGGGAGAGCGCTGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR CCA 72 bp | CGCTCTCCCTTACACAGGGGCCGAGCCCCGTGCAGCTaGCCGCCACGGTGCAGGATACCAGAGCCCACCACA | + |
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Preference number: 3 (lower is better) Translates to: RSPLHRGRAPCS*PPRCRIPEPTT Trigger: TGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGGGAGAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTACACAGGGGCCGAGCCCCGTGCAGCTGGCCGCCACGGTGCAGGATACCAGCCCCCTGTGAAGTCCTaGCCCAGAGCCACATTGAGG | + |
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Preference number: 3 (lower is better) Translates to: PYTGAEPRAAGRHGAGYQPPVKS*PRATLR Trigger: CCTCAATGTGGCTCTGGGCAAGGACTTCACAGGGGG...CTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR GCA 72 bp | TGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATaGTCCACTTCCAGGGTCTCCTTCAAGGCTGCGGGT | + |
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Preference number: 3 (lower is better) Translates to: WPPRCRIPEPTT*STSRVSFKAAG Trigger: ACCCGCAGCCTTGAAGGAGACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR TCA 72 bp | GACAGCCCAGATCCAGGTCCTGGCCCAGTGCGTACTTaGCCACAAAGGCACGGTGACTGTCGAGGTAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: DSPDPGPGPVRT*PQRHGDCRGSP Trigger: GGGGCTACCTCGACAGTCACCGTGCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGGCTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR GCA 72 bp | GCAGCACATGGGACAGAGGCGATTTCGAACAGCAGATaGCCGCAGCCACACGACGAGGTTCCAGCGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: AAHGTEAISNSR*PQPHDEVPALS Trigger: GGAGAGCGCTGGAACCTCGTCGTGTGGCTGCGGGCATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR CCA 72 bp | CCTCATCGTCCACCAGCTCTGGCTTCTGGCAGCACATaGGACAGAGGCGATTTCGAACAGCAGATGCCCGCA | + |
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Preference number: 3 (lower is better) Translates to: PHRPPALASGST*DRGDFEQQMPA Trigger: TGCGGGCATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR GCA 72 bp | ATCGTAGTGACAGCCCAGATCCAGGTCCTGGCCCAGTaGGTACTTGACCACAAAGGCACGGTGACTGTCGAG | + |
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Preference number: 3 (lower is better) Translates to: IVVTAQIQVLAQ*VLDHKGTVTVE Trigger: CTCGACAGTCACCGTGCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGGCTGTCACTACGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
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| 3UTR CCA 72 bp | AAAGCCGTCACCGAAACCCTCATCGTCCACCAGCTCTaGCTTCTGGCAGCACATGGGACAGAGGCGATTTCG | + |
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Preference number: 3 (lower is better) Translates to: KAVTETLIVHQL*LLAAHGTEAIS Trigger: CGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTGACGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR TCA 72 bp | AAGGTAGATGTCTGCCCAGCCCTATCTCTGAGCCACTaGCTGAAGCAACCCTCCCTCCTCAGTCAGAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: KVDVCPALSLSH*LKQPSLLSQSS Trigger: GGAGCTCTGACTGAGGAGGGAGGGTTGCTTCAGTCAGTGGCTCAGAGATAGGGCTGGGCAGACATCTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
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| 3UTR CCA 72 bp | TCACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCTaGCAGCACATGGGACAGAGGCGATTTCGAACAGCA | + |
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Preference number: 3 (lower is better) Translates to: SPKPSSSTSSGF*QHMGQRRFRTA Trigger: TGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
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| 3UTR TCA 72 bp | CAAATAAGGCTTGCTACAGATCACCTGTCCAAAGAATaGCCCAAAAGTCTGCGTGTCCTTTTGACCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QIRLATDHLSKE*PKSLRVLLTQG Trigger: TCCTTGGGTCAAAAGGACACGCAGACTTTTGGGTCATTCTTTGGACAGGTGATCTGTAGCAAGCCTTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| 3UTR GCA 72 bp | ACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTaGTACAGATCACCTGTCCAAAGAATGACCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TPNPQYFISNKA*YRSPVQRMTQK Trigger: CTTTTGGGTCATTCTTTGGACAGGTGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR TCA 90 bp | CCCTTACACAGGGGCCGAGCCCCGTGCAGCTGGCCGCCACGGTGCAGGATACCAGGAAGTCCTTGGAGGTaGCACAACCACGGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLHRGRAPCSWPPRCRIPGSPWR*HNHGCA Trigger: TGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCC...TGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCAGCAGGAAGCGTTCCCGCAGCGGGGTCACCAGGGGGTCATCCAGGCCTACGGCGCCCGACCTCCTaGTCAAGCTCCTCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VAAGSVPAAGSPGGHPGLRRPTS*SSSSKS Trigger: ACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCG...TAGGCCTGGATGACCCCCTGGTGACCCCGCTGCGGGAACGCTTCCTGCTGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196627.5 ENSMUST00000198770.2 |
||
| CDS-3UTR CCA 90 bp | CGCTCTCCCTTACACAGGGGCCGAGCCCCGTGCAGCTGGCCGCCACGGTGCAGGTGTTGGGCCTTCCCTTaGGCATGTCCGACTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSPLHRGRAPCSWPPRCRCWAFP*ACPTAQ Trigger: TTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACA...CCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGGCCCCTGTGTAAGGGAGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR TCA 90 bp | TCAGTGGCAGCAGGAAGCGTTCCCGCAGCGGGGTCACCAGGGGGTCATCCAGGCGGAAGTCCTTGGAGGTaGCACAACCACGGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVAAGSVPAAGSPGGHPGGSPWR*HNHGCA Trigger: TGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCC...GCCTGGATGACCCCCTGGTGACCCCGCTGCGGGAACGCTTCCTGCTGCCACTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196627.5 ENSMUST00000198770.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAGCAGGAAGCGTTCCCGCAGCGGGGTCACCAGGGGGTCATCCAGGCCTGCCACGTACAGGTTCTaGGAGCAGAAGCAGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSRKRSRSGVTRGSSRPATYRF*EQKQAQ Trigger: CTGCGCCTGCTTCTGCTCCCAGAACCTGTACGTGGC...AGGCCTGGATGACCCCCTGGTGACCCCGCTGCGGGAACGCTTCCTGCTGCCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196627.5 |
||
| CDS-3UTR CCA 90 bp | GACTGTCACCACAACCAGGGCGCTAGGGAGTCCAGAGCCCCACTGCTGGACATGCGAGCCCCGTGCAGCTaGCCGCCACGGTGCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: DCHHNQGARESRAPLLDMRAPCS*PPRCRI Trigger: TATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCG...CATGTCCAGCAGTGGGGCTCTGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR GCA 90 bp | TGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATGCTCCACTTCCAGGGTCCGGCGCCCGACCTCCTaGTCAAGCTCCTCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPPRCRIPEPTTCSTSRVRRPTS*SSSSKS Trigger: ACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCG...GACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
||
| CDS-3UTR GCA 90 bp | CCGAGCCCCGTGCAGCTGGCCGCCACGGTGCAGGATACCAGAGCCCACCACATGTTGGGCATGTCCGACTaGTCAAAATGCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPVQLAATVQDTRAHHMLGMSD*SKCSSS Trigger: AGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAA...CATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCTGCACGGGGCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | CCGCCACGGTGCAGGATACCAGAGCCCACCACATGCTCCACTTCCAGGGTCTCCCAGGTCCTGGCCCAGTaGGTACTTGACCACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPRCRIPEPTTCSTSRVSQVLAQ*VLDHKG Trigger: GCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTG...GGAGACCCTGGAAGTGGAGCATGTGGTGGGCTCTGGTATCCTGCACCGTGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGTGGGCTCCTCCCGGGTAAAGCCGTCACCGAAACCCTCATCGTCCACCAGGCCACGTACAGGTTCTaGGAGCAGAAGCAGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CGGLLPGKAVTETLIVHQATYRF*EQKQAQ Trigger: CTGCGCCTGCTTCTGCTCCCAGAACCTGTACGTGGC...CTGGTGGACGATGAGGGTTTCGGTGACGGCTTTACCCGGGAGGAGCCCACCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | CGTGTCCTTTTGACCCAAGGAGTGGCACGGCTGCAGACTTTATTTCTGCCCTCCATTCCTGTCCCAGCCTaGGGCGGCGCCCGACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVLLTQGVARLQTLFLPSIPVPA*GGARPP Trigger: AGGAGGTCGGGCGCCGCCGCAGGCTGGGACAGGAAT...GGAGGGCAGAAATAAAGTCTGCAGCCGTGCCACTCCTTGGGTCAAAAGGACACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | GATGTGAACCCAGAAAGTCTGAATCCCCGCCCCCAATCCTCCGCTCTCCAGCACGGTCTCCTTCAAGGCTaGGGGTGCCTGGAAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVNPESLNPRPQSSALQHGLLQG*GCLEEA Trigger: GGCCTCTTCCAGGCACCCGCAGCCTTGAAGGAGACC...GTGCTGGAGAGCGGAGGATTGGGGGCGGGGATTCAGACTTTCTGGGTTCACATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR TCA 90 bp | CAGGTCCTGGCCCAGTGCGTACTTGACCACAAAGGCACGGTGACTGTCGAGGTAGGAAGTCCTTGGAGGTaGCACAACCACGGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVLAQCVLDHKGTVTVEVGSPWR*HNHGCA Trigger: TGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCC...TACCTCGACAGTCACCGTGCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCGGGTAAAGCCGTCACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCAAGGCTGCGGGTGCCTaGAAGAGGCCCCCAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRVKPSPKPSSSTSSGFKAAGA*KRPPKY Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCGCAGCCTT...GAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTGACGGCTTTACCCGGGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTCTGGCTTCTGGCAGCACATGGGACAGAGGCGATTTCGAACAGCAGATCGGCGCCCGACCTCCTaGTCAAGCTCCTCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSGFWQHMGQRRFRTADRRPTS*SSSSKS Trigger: ACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCG...ATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
||
| CDS-3UTR GCA 90 bp | TTGACCCAAGGAGTGGCACGGCTGCAGACTTTATTTCTGCCCTCCCTGCCCACACTTCAAGGCTGCGGGTaGCTGGAAGAGGCCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTQGVARLQTLFLPSLPTLQGCG*LEEAPK Trigger: TTTGGGGGCCTCTTCCAGGCACCCGCAGCCTTGAAG...TGTGGGCAGGGAGGGCAGAAATAAAGTCTGCAGCCGTGCCACTCCTTGGGTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CCA 90 bp | CCTATCTCTGAGCCACTGACTGAAGCAACCCTCCCTCCTCAGTCAGAGCTCCCTCAACAAGGCCATCAGTaGCAGCAGGAAGCGTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PISEPLTEATLPPQSELPQQGHQ*QQEAFP Trigger: CGGGAACGCTTCCTGCTGCCACTGATGGCCTTGTTG...AGGGAGCTCTGACTGAGGAGGGAGGGTTGCTTCAGTCAGTGGCTCAGAGATAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CCA 90 bp | GCGTGTCCTTTTGACCCAAGGAGTGGCACGGCTGCAGACTTTATTTCTGCCCTCCCCAGATCCAGGTCCTaGCCCAGTGCGTACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: ACPFDPRSGTAADFISALPRSRS*PSAYLT Trigger: GGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGG...GAGGGCAGAAATAAAGTCTGCAGCCGTGCCACTCCTTGGGTCAAAAGGACACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | CACCGAAACCCTCATCGTCCACCAGCTCTGGCTTCTGGCAGCACATGGGACAGACCCACCGTAGTCCCATaGTTGTTCATGGTGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRNPHRPPALASGSTWDRPTVVP*LFMVLG Trigger: GCCCAACACCATGAACAACCATGGGACTACGGTGGG...TCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGAGGGTTTCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR TCA 90 bp | GCACGGCTGCAGACTTTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGGGAAGTCCTTGGAGGTaGCACAACCACGGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLQTLFLPSLPTMASFQGSPWR*HNHGCA Trigger: TGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCC...CTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCAGCCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | TCATCGTCCACCAGCTCTGGCTTCTGGCAGCACATGGGACAGAGGCGATTTCGACTGGCACCCGATAGATaGGCTTCTCCTCTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSSGFWQHMGQRRFRLAPDR*ASPLTL Trigger: CAGTGTCAGAGGAGAAGCGCATCTATCGGGTGCCAG...TCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR TCA 90 bp | GGAGTCCAGAGCCCCACTGCTGGACATGCAAAACACAGATGTGAACCCAGAAAGGATGCGCTTCTCCTCTaGCACTGTCTCCAGACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVQSPTAGHAKHRCEPRKDALLL*HCLQTL Trigger: CAGCGTCTGGAGACAGTGTCAGAGGAGAAGCGCATC...CTTTCTGGGTTCACATCTGTGTTTTGCATGTCCAGCAGTGGGGCTCTGGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | TCGTCCACCAGCTCTGGCTTCTGGCAGCACATGGGACAGAGGCGATTTCGAACATCCGACTGCTCAAAATaGTCCAGCTCTTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTSSGFWQHMGQRRFRTSDCSK*SSSSSR Trigger: CCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGA...TGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGCCCCACTGCTGGACATGCAAAACACAGATGTGAACCCAGAAAGTCTGGCCACGTACAGGTTCTaGGAGCAGAAGCAGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRAPLLDMQNTDVNPESLATYRF*EQKQAQ Trigger: CTGCGCCTGCTTCTGCTCCCAGAACCTGTACGTGGC...CAGACTTTCTGGGTTCACATCTGTGTTTTGCATGTCCAGCAGTGGGGCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | AGATGTCTGCCCAGCCCTATCTCTGAGCCACTGACTGAAGCAACCCTCCCTCCTACTGTCTCCAGACGCTaGAGAAGGCCCTCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: RCLPSPISEPLTEATLPPTVSRR*RRPSRS Trigger: AGATCTTGAGGGCCTTCTCCAGCGTCTGGAGACAGT...AGGAGGGAGGGTTGCTTCAGTCAGTGGCTCAGAGATAGGGCTGGGCAGACATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | AAACACAGATGTGAACCCAGAAAGTCTGAATCCCCGCCCCCAATCCTCCGCTCTAAGGCTGCGGGTGCCTaGAAGAGGCCCCCAAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: KHRCEPRKSESPPPILRSKAAGA*KRPPKY Trigger: GTATTTTGGGGGCCTCTTCCAGGCACCCGCAGCCTT...AGAGCGGAGGATTGGGGGCGGGGATTCAGACTTTCTGGGTTCACATCTGTGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | GCACGGCTGCAGACTTTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGCCCCATGGTTGTTCATaGTGTTGGGCCTTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLQTLFLPSLPTMASFQPHGCS*CWAFPW Trigger: CCAAGGGAAGGCCCAACACCATGAACAACCATGGGG...CTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCAGCCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CCA 90 bp | GATGTGAACCCAGAAAGTCTGAATCCCCGCCCCCAATCCTCCGCTCTCCAGCACTACATCAGTACCCCATaGTTGTTCATGGTGTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DVNPESLNPRPQSSALQHYISTP*LFMVLG Trigger: GCCCAACACCATGAACAACCATGGGGTACTGATGTA...GTGCTGGAGAGCGGAGGATTGGGGGCGGGGATTCAGACTTTCTGGGTTCACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTTTGACCCAAGGAGTGGCACGGCTGCAGACTTTATTTCTGCCCTCCCTGGTTGTTCATGGTGTTaGGCCTTCCCTTGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CPFDPRSGTAADFISALPGCSWC*AFPWAC Trigger: ACATGCCCAAGGGAAGGCCCAACACCATGAACAACC...AGGGAGGGCAGAAATAAAGTCTGCAGCCGTGCCACTCCTTGGGTCAAAAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGACCCAGATCCAGGTCCTaGCCCAGTGCGTACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: ACSTPNPQYFISNKACYRPRSRS*PSAYLT Trigger: GGTCAAGTACGCACTGGGCCAGGACCTGGATCTGGG...TCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | TTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGCATCAACACCTCTGGCTGGCACCCGATAGATaGGCTTCTCCTCTGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LFLPSLPTMASFQHQHLWLAPDR*ASPLTL Trigger: CAGTGTCAGAGGAGAAGCGCATCTATCGGGTGCCAG...CCAGAGGTGTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | CTCAGTCAGAGCTCCCTAGGGGTCATGTCTTTTCCTGACTTCTTCTCTTCCTGGACTGTCTCCAGACGCTaGAGAAGGCCCTCAAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSSLGVMSFPDFFSSWTVSRR*RRPSRS Trigger: AGATCTTGAGGGCCTTCTCCAGCGTCTGGAGACAGT...CCAGGAAGAGAAGAAGTCAGGAAAAGACATGACCCCTAGGGAGCTCTGACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | TATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTCCAGAACCAGCTCTGGCTTCTaGCAGCACATGGGACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNINLLDCHHNQGARESRTSSGF*QHMGQR Trigger: CCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGT...TCTGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR GCA 90 bp | ACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGATCACCTGTCCAAAGAACGGCGCCCGACCTCCTaGTCAAGCTCCTCCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLSTSSQIRLATDHLSKERRPTS*SSSSKS Trigger: ACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCG...TTCTTTGGACAGGTGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | TTTATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTCCACAGGTCCTGGCCCAGTaGGTACTTGACCACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIISTCWTVTTTRALGSPQVLAQ*VLDHKG Trigger: GCCTTTGTGGTCAAGTACGCACTGGGCCAGGACCTG...TGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | TATAAAGTGCTTTATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGCTGGCCGCCACGGTaGAGGATACCAGAGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YKVLYNINLLDCHHNQGASWPPR*RIPEPT Trigger: GGTGGGCTCTGGTATCCTGCACCGTGGCGGCCAGCT...AGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATAAAGCACTTTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CCA 90 bp | CCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGATCACCTGGCCCCCACCGTAGTCTaGGTACAACAAGGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQTLSTSSQIRLATDHLAPTVV*VQQGHQ Trigger: CTGATGGCCTTGTTGTACCCAGACTACGGTGGGGGC...CAGGTGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CCA 90 bp | TGCTTTATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTATCGTCCACCAGCTCTaGCTTCTGGCAGCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFIISTCWTVTTTRALGSIVHQL*LLAAHG Trigger: CCCATGTGCTGCCAGAAGCCAGAGCTGGTGGACGAT...ACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR GCA 90 bp | TATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTCCAGATCCGACTGCTCAAAATaGTCCAGCTCTTCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNINLLDCHHNQGARESRSDCSK*SSSSSR Trigger: CCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGA...TCTGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | TATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTCCAGAGGTTGTTCATGGTGTTaGGCCTTCCCTTGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: YNINLLDCHHNQGARESRGCSWC*AFPWAC Trigger: ACATGCCCAAGGGAAGGCCCAACACCATGAACAACC...TCTGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR GCA 90 bp | GCAGACTTTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGCATCAACATTGGGCATGTCCGACTaGTCAAAATGCTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ADFISALPAHNGKFSASTLGMSD*SKCSSS Trigger: AGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAA...TGTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | TTTATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTCCATCCCATGGTTGTTCATaGTGTTGGGCCTTCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIISTCWTVTTTRALGSPSHGCS*CWAFPW Trigger: CCAAGGGAAGGCCCAACACCATGAACAACCATGGGA...TGGACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR CCA 90 bp | TATAAAGTGCTTTATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTTGTTGGGCCTTCCCTTaGGCATGTCCGACTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YKVLYNINLLDCHHNQGACWAFP*ACPTAQ Trigger: TTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACA...AGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATAAAGCACTTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS TCA 90 bp | CAGGAAGCGTTCCCGCAGCGGGGTCACCAGGGGGTCATCCAGGCCTaGCACTGTCTCCAGACGCTGGAGAAGGCCCTCAAGATCTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QEAFPQRGHQGVIQA*HCLQTLEKALKICA Trigger: GGCGCAGATCTTGAGGGCCTTCTCCAGCGTCTGGAGACAGTGTCAGGCCTGGATGACCCCCTGGTGACCCCGCTGCGGGAACGCTTCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199457.5 |
||
| CDS GCA 90 bp | AGCCTGCGGCGGCGCCCGACCTCCTGCTCAAGCTCCTCCAAGAGTTaGTGGAAGTCCTTGGAGGTGACACAACCACGGCTGCGCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRRRPTSCSSSSKS*WKSLEVTQPRLRRS Trigger: GCTCCTGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCGCCGCAGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS CCA 90 bp | CTGCGGCGGCGCCCGACCTCCTGCTCAAGCTCCTCCAAGAGTTGCTaGAAGTCCTTGGAGGTGACACAACCACGGCTGCGCAGGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRRRPTSCSSSSKSC*KSLEVTQPRLRRSW Trigger: CCAGCTCCTGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCGCCGCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS GCA 90 bp | CTGACAGCCGATTCCTGTCCCAGCCTGCGGCGGCGCCCGACCTCCTaGTCAAGCTCCTCCAAGAGTTGCTGGAAGTCCTTGGAGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: LTADSCPSLRRRPTS*SSSSKSCWKSLEVT Trigger: TGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCGCCGCAGGCTGGGACAGGAATCGGCTGTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS TCA 90 bp | CCTCCTGCTCAAGCTCCTCCAAGAGTTGCTGGAAGTCCTTGGAGGTaGCACAACCACGGCTGCGCAGGAGCTGGCCGTAGTCACGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPAQAPPRVAGSPWR*HNHGCAGAGRSHGA Trigger: TGCGCCGTGACTACGGCCAGCTCCTGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS-3UTR CAA 90 bp | TCAGTGGCAGCAGGAAGCGTTCCCGCAGCGGGGTCACCAGGGGGTCATCCAGGCAAGCTCCTCCAAGAGTaGCTGGAAGTCCTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVAAGSVPAAGSPGGHPGKLLQE*LEVLGG Trigger: ACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTT...GCCTGGATGACCCCCTGGTGACCCCGCTGCGGGAACGCTTCCTGCTGCCACTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196627.5 ENSMUST00000198770.2 |
||
| CDS CCA 90 bp | CACAAAGGCACGGTGACTGTCGAGGTAGCCCCCACCGTAGTCCCATaGTTGTTCATGGTGTTGGGCCTTCCCTTGGGCATGTCCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: HKGTVTVEVAPTVVP*LFMVLGLPLGMSDC Trigger: GCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGCTACCTCGACAGTCACCGTGCCTTTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS-3UTR CAA 90 bp | CCTATCTCTGAGCCACTGACTGAAGCAACCCTCCCTCCTCAGTCAGAGCTCCCTGTGTTGGGCCTTCCCTaGGGCATGTCCGACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PISEPLTEATLPPQSELPVLGLP*GMSDCS Trigger: TGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACAC...AGGGAGCTCTGACTGAGGAGGGAGGGTTGCTTCAGTCAGTGGCTCAGAGATAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS GCA 90 bp | TTCATGGTGTTGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAATaGTCCAGCTCTTCCAGCAGGGTCTGGCAGAACTTGGCCGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FMVLGLPLGMSDCSK*SSSSSRVWQNLAEN Trigger: GTTCTCGGCCAAGTTCTGCCAGACCCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS CCA 90 bp | GTCACCAGGGGGTCATCCAGGCCTAGTTCATACATCAGTACCCCATaGTTGTTCATGGTGTTGGGCCTTCCCTTGGGCATGTCCGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VTRGSSRPSSYISTP*LFMVLGLPLGMSDC Trigger: GCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAACTAGGCCTGGATGACCCCCTGGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CAA 90 bp | GCACGGCTGCAGACTTTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGGTGTTGGGCCTTCCCTaGGGCATGTCCGACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARLQTLFLPSLPTMASFQVLGLP*GMSDCS Trigger: TGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACAC...CTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCAGCCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS CCA 90 bp | CATACATCAGTACCCCATGGTTGTTCATGGTGTTGGGCCTTCCCTTaGGCATGTCCGACTGCTCAAAATGCTCCAGCTCTTCCAGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTSVPHGCSWCWAFP*ACPTAQNAPALPAG Trigger: CCCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CAA 90 bp | ACCAGCTCTGGCTTCTGGCAGCACATGGGACAGAGGCGATTTCGAACAGCAGATAAGCTCCTCCAAGAGTaGCTGGAAGTCCTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSSGFWQHMGQRRFRTADKLLQE*LEVLGG Trigger: ACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTT...ATCTGCTGTTCGAAATCGCCTCTGTCCCATGTGCTGCCAGAAGCCAGAGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119269.6 ENSMUST00000198770.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGCATTATCGTAGTGACAGCCCAGATCCAGGTCCTGGCCCAGTGCGTACTTAAGCTCCTCCAAGAGTaGCTGGAAGTCCTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSIIVVTAQIQVLAQCVLKLLQE*LEVLGG Trigger: ACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTT...AAGTACGCACTGGGCCAGGACCTGGATCTGGGCTGTCACTACGATAATGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198770.2 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGCATCAACACCTCTGGCCCCCTGTGAAGTCCTaGCCCAGAGCCACATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLPSLPTMASFQHQHLWPPVKS*PRATLR Trigger: CCTCAATGTGGCTCTGGGCAAGGACTTCACAGGGGG...CCAGAGGTGTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS CCA 90 bp | CCAGGCCTAGTTCATACATCAGTACCCCATGGTTGTTCATGGTGTTaGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAATGCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLVHTSVPHGCSWC*AFPWACPTAQNAPA Trigger: AGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAACTAGGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CAA 90 bp | TGCAGACTTTATTTCTGCCCTCCCTGCCCACAATGGCAAGTTTTCAGCATCAACCCCCCTGTGAAGTCCTaGCCCAGAGCCACATTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLYFCPPCPQWQVFSINPPVKS*PRATLR Trigger: CCTCAATGTGGCTCTGGGCAAGGACTTCACAGGGGG...GTTGATGCTGAAAACTTGCCATTGTGGGCAGGGAGGGCAGAAATAAAGTCTGCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CAA 90 bp | AGTCAGAGCTCCCTAGGGGTCATGTCTTTTCCTGACTTCTTCTCTTCCTGGGCCACCGTAGTCCCATGGTaGTTCATGGTGTTGGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQSSLGVMSFPDFFSSWATVVPW*FMVLGL Trigger: AAGGCCCAACACCATGAACAACCATGGGACTACGGT...GGCCCAGGAAGAGAAGAAGTCAGGAAAAGACATGACCCCTAGGGAGCTCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS CCA 90 bp | GGTCATCCAGGCCTAGTTCATACATCAGTACCCCATGGTTGTTCATaGTGTTGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHPGLVHTSVPHGCS*CWAFPWACPTAQNA Trigger: AGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAACTAGGCCTGGATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS-3UTR CAA 90 bp | TGCTTTATAATATCAACTTGTTGGACTGTCACCACAACCAGGGCGCTAGGGAGTAGGGTCTGGCAGAACTaGGCCGAGAACACTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: CFIISTCWTVTTTRALGSRVWQN*AENTGT Trigger: GGTGCCAGTGTTCTCGGCCAAGTTCTGCCAGACCCT...ACTCCCTAGCGCCCTGGTTGTGGTGACAGTCCAACAAGTTGATATTATAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CAA 90 bp | GCCTGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGATGGTTGTTCATGGTGTaGGGCCTTCCCTTGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: ACSTPNPQYFISNKACYRWLFMV*GLPLGM Trigger: CATGCCCAAGGGAAGGCCCAACACCATGAACAACCA...TCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CAA 90 bp | TGCTCCACTCCAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGATCAAAGCTCCTCCAAGAGTaGCTGGAAGTCCTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSTPNPQYFISNKACYRSKLLQE*LEVLGG Trigger: ACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTT...TGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTGGAGTGGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS-3UTR CAA 90 bp | CAAACCCTCAGTACTTCATCTCAAATAAGGCTTGCTACAGATCACCTGTCCAAATGGTTGTTCATGGTGTaGGGCCTTCCCTTGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: QTLSTSSQIRLATDHLSKWLFMV*GLPLGM Trigger: CATGCCCAAGGGAAGGCCCAACACCATGAACAACCA...TTTGGACAGGTGATCTGTAGCAAGCCTTATTTGAGATGAAGTACTGAGGGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS CAA 90 bp | CAGCCTGCGGCGGCGCCCGACCTCCTGCTCAAGCTCCTCCAAGAGTaGCTGGAAGTCCTTGGAGGTGACACAACCACGGCTGCGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPAAAPDLLLKLLQE*LEVLGGDTTTAAQE Trigger: CTCCTGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCGCCGCAGGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
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| CDS GCA 72 bp | GATTCCTGTCCCAGCCTGCGGCGGCGCCCGACCTCCTaGTCAAGCTCCTCCAAGAGTTGCTGGAAGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DSCPSLRRRPTS*SSSSKSCWKSL Trigger: CAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCGCCGCAGGCTGGGACAGGAATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
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| CDS TCA 72 bp | GGCACGGTGACTGTCGAGGTAGCCCCCACCGTAGTCTaGCACTGTCTCCAGACGCTGGAGAAGGCCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTVTVEVAPTVV*HCLQTLEKALK Trigger: CTTGAGGGCCTTCTCCAGCGTCTGGAGACAGTGTCAGACTACGGTGGGGGCTACCTCGACAGTCACCGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198505.2 |
||
| CDS GCA 72 bp | CGGCGCCCGACCTCCTGCTCAAGCTCCTCCAAGAGTTaGTGGAAGTCCTTGGAGGTGACACAACCACGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRPTSCSSSSKS*WKSLEVTQPRL Trigger: CAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS CCA 72 bp | CGCCCGACCTCCTGCTCAAGCTCCTCCAAGAGTTGCTaGAAGTCCTTGGAGGTGACACAACCACGGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPTSCSSSSKSC*KSLEVTQPRLR Trigger: GCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS CAA 72 bp | GCGGCGCCCGACCTCCTGCTCAAGCTCCTCCAAGAGTaGCTGGAAGTCCTTGGAGGTGACACAACCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAPDLLLKLLQE*LEVLGGDTTTA Trigger: AGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGAGGTCGGGCGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS TCA 72 bp | CAAGCTCCTCCAAGAGTTGCTGGAAGTCCTTGGAGGTaGCACAACCACGGCTGCGCAGGAGCTGGCCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QAPPRVAGSPWR*HNHGCAGAGRS Trigger: ACTACGGCCAGCTCCTGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS CCA 72 bp | ACGGTGACTGTCGAGGTAGCCCCCACCGTAGTCCCATaGTTGTTCATGGTGTTGGGCCTTCCCTTGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: TVTVEVAPTVVP*LFMVLGLPLGM Trigger: CATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGCTACCTCGACAGTCACCGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS CAA 72 bp | TCCTGCTCAAGCTCCTCCAAGAGTTGCTGGAAGTCCTaGGAGGTGACACAACCACGGCTGCGCAGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSSSSKSCWKS*EVTQPRLRRSW Trigger: CCAGCTCCTGCGCAGCCGTGGTTGTGTCACCTCCAAGGACTTCCAGCAACTCTTGGAGGAGCTTGAGCAGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS CAA 72 bp | GTGACTGTCGAGGTAGCCCCCACCGTAGTCCCATGGTaGTTCATGGTGTTGGGCCTTCCCTTGGGCATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTVEVAPTVVPW*FMVLGLPLGMS Trigger: GGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGCTACCTCGACAGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS CAA 90 bp | GCCCCCACCGTAGTCCCATGGTTGTTCATGGTGTTGGGCCTTCCCTaGGGCATGTCCGACTGCTCAAAATGCTCCAGCTCTTCCAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APTVVPWLFMVLGLP*GMSDCSKCSSSSSR Trigger: CCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS CAA 90 bp | AAAGGCACGGTGACTGTCGAGGTAGCCCCCACCGTAGTCCCATGGTaGTTCATGGTGTTGGGCCTTCCCTTGGGCATGTCCGACTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KGTVTVEVAPTVVPW*FMVLGLPLGMSDCS Trigger: TGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGCTACCTCGACAGTCACCGTGCCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS CAA 90 bp | ACTGTCGAGGTAGCCCCCACCGTAGTCCCATGGTTGTTCATGGTGTaGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAATGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TVEVAPTVVPWLFMV*GLPLGMSDCSKCSS Trigger: GCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGCTACCTCGACAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS GCA 72 bp | CACTGTCTCCAGACGCTGGAGAAGGCCCTCAAGATCTaGGCCTGGGGACGTACTATATTCAGCTGCAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: HCLQTLEKALKI*AWGRTIFSCSH Trigger: ATGGCTGCAGCTGAATATAGTACGTCCCCAGGCGCAGATCTTGAGGGCCTTCTCCAGCGTCTGGAGACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS GCA 72 bp | TTGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAATaGTCCAGCTCTTCCAGCAGGGTCTGGCAGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGLPLGMSDCSK*SSSSSRVWQNL Trigger: CAAGTTCTGCCAGACCCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS GCA 72 bp | TTCATGGTGTTGGGCCTTCCCTTGGGCATGTCCGACTaGTCAAAATGCTCCAGCTCTTCCAGCAGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FMVLGLPLGMSD*SKCSSSSSRVW Trigger: CCAGACCCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 |
||
| CDS CAA 72 bp | GTAGCCCCCACCGTAGTCCCATGGTTGTTCATGGTGTaGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: VAPTVVPWLFMV*GLPLGMSDCSK Trigger: TTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTACGGTGGGGGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
||
| CDS CCA 72 bp | CTCCAGACGCTGGAGAAGGCCCTCAAGATCTGCGCCTaGGGACGTACTATATTCAGCTGCAGCCATAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LQTLEKALKICA*GRTIFSCSHKL Trigger: GAGTTTATGGCTGCAGCTGAATATAGTACGTCCCCAGGCGCAGATCTTGAGGGCCTTCTCCAGCGTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024470.13 ENSMUST00000119269.6 ENSMUST00000196627.5 ENSMUST00000198505.2 ENSMUST00000198770.2 ENSMUST00000199457.5 |
||
| CDS CCA 72 bp | GTACCCCATGGTTGTTCATGGTGTTGGGCCTTCCCTTaGGCATGTCCGACTGCTCAAAATGCTCCAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPHGCSWCWAFP*ACPTAQNAPAL Trigger: AAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS CCA 72 bp | GGCCTAGTTCATACATCAGTACCCCATGGTTGTTCATaGTGTTGGGCCTTCCCTTGGGCATGTCCGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLVHTSVPHGCS*CWAFPWACPTA Trigger: AGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAACTAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
||
| CDS CAA 72 bp | AGTACCCCATGGTTGTTCATGGTGTTGGGCCTTCCCTaGGGCATGTCCGACTGCTCAAAATGCTCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: STPWLFMVLGLP*GMSDCSKCSSS Trigger: AGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
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| CDS CAA 72 bp | GTAGTCCCATGGTTGTTCATGGTGTTGGGCCTTCCCTaGGGCATGTCCGACTGCTCAAAATGCTCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VVPWLFMVLGLP*GMSDCSKCSSS Trigger: AGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119269.6 |
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| CDS CAA 90 bp | TCATACATCAGTACCCCATGGTTGTTCATGGTGTTGGGCCTTCCCTaGGGCATGTCCGACTGCTCAAAATGCTCCAGCTCTTCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SYISTPWLFMVLGLP*GMSDCSKCSSSSSR Trigger: CCTGCTGGAAGAGCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
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| CDS CAA 90 bp | TCCAGGCCTAGTTCATACATCAGTACCCCATGGTTGTTCATGGTGTaGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAATGCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SRPSSYISTPWLFMV*GLPLGMSDCSKCSS Trigger: GCTGGAGCATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAACTAGGCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
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| CDS CCA 72 bp | GTTCATACATCAGTACCCCATGGTTGTTCATGGTGTTaGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: VHTSVPHGCSWC*AFPWACPTAQN Trigger: ATTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
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| CDS CAA 72 bp | AGTTCATACATCAGTACCCCATGGTTGTTCATGGTGTaGGGCCTTCCCTTGGGCATGTCCGACTGCTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSYISTPWLFMV*GLPLGMSDCSK Trigger: TTTTGAGCAGTCGGACATGCCCAAGGGAAGGCCCAACACCATGAACAACCATGGGGTACTGATGTATGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024470.13 |
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