Pregenerated sensors for OFCC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047094Ensembl transcript IDs: ENSMUST00000054635.8, ENSMUST00000224813.2, ENSMUST00000224909.2
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGGGGTCACAGCTGGAGACCTTGGACTCGGTGTCATGGCTTTTaGAGATGTAATCGTGCACTGCCACCTTCCTTCTCTCACCATGGA | + |
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Preference number: 1 (lower is better) Translates to: GGGHSWRPWTRCHGF*RCNRALPPSFSHHG Trigger: TCCATGGTGAGAGAAGGAAGGTGGCAGTGCACGATTACATCTGCAAAAGCCATGACACCGAGTCCAAGGTCTCCAGCTGTGACCCCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 90 bp | GAAGTAACCCTTCTTGGACCAACTGCAGACTCAAAACTTTCATCCTaGTGGTGGGGGTCACAGCTGGAGACCTTGGACTCGGTGTCATGG | + |
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Preference number: 1 (lower is better) Translates to: EVTLLGPTADSKLSS*WWGSQLETLDSVSW Trigger: CCATGACACCGAGTCCAAGGTCTCCAGCTGTGACCCCCACCATCAGGATGAAAGTTTTGAGTCTGCAGTTGGTCCAAGAAGGGTTACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR GCA 90 bp | CCACTGGCCCAGGTAATGCAGGTAGAGCCTCACGAACCAGAGAGATaGCATCATCAGAAGGATGTACCAGAAGCTCTGACTTTGCCATTG | + |
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Preference number: 1 (lower is better) Translates to: PLAQVMQVEPHEPER*HHQKDVPEALTLPL Trigger: CAATGGCAAAGTCAGAGCTTCTGGTACATCCTTCTGATGATGGCATCTCTCTGGTTCGTGAGGCTCTACCTGCATTACCTGGGCCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR GCA 90 bp | TGGTTGCTTGGTTCTCAGGAACATCCAGTAGAGTTTAGCTGCATCTaGAATAGGTGTCTCCCCATTATGTGCAAGTCGCCCCAGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: WLLGSQEHPVEFSCI*NRCLPIMCKSPQES Trigger: GCTTTCCTGGGGCGACTTGCACATAATGGGGAGACACCTATTGCAGATGCAGCTAAACTCTACTGGATGTTCCTGAGAACCAAGCAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CCA 90 bp | GTAGCAGAGCTCAACAGTGTAGGAGTGAAACTGGAATTTTGTAACTaGAGTGGAGAGGACCCAGAGGAAAAGCCACTGGCCCAGGTAATG | + |
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Preference number: 1 (lower is better) Translates to: VAELNSVGVKLEFCN*SGEDPEEKPLAQVM Trigger: CATTACCTGGGCCAGTGGCTTTTCCTCTGGGTCCTCTCCACTCCAGTTACAAAATTCCAGTTTCACTCCTACACTGTTGAGCTCTGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CCA 90 bp | CAGCAGAGTGTAAACTACCACTGTGATCAGAGCACCGAGGATGGCTaGTTGCTTGGTTCTCAGGAACATCCAGTAGAGTTTAGCTGCATC | + |
|
Preference number: 1 (lower is better) Translates to: QQSVNYHCDQSTEDG*LLGSQEHPVEFSCI Trigger: GATGCAGCTAAACTCTACTGGATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTGGTAGTTTACACTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR GCA 90 bp | CCACAGAAACGCTTTCATGGAAATAGAGCCCCACATCATAAAAGTTaGCACCATGAAGAACTGGGCACGTCCTTGTCTTCAGCTGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PQKRFHGNRAPHHKS*HHEELGTSLSSAAQ Trigger: CTGAGCAGCTGAAGACAAGGACGTGCCCAGTTCTTCATGGTGGCAACTTTTATGATGTGGGGCTCTATTTCCATGAAAGCGTTTCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 90 bp | TTGAGGCCCCTAATACATCTGATCTGTATTTGTAGACTAGGCAACTaGGGCTGCTCACCCTTCCAGCAAGTTCCTTCTGTCCTTCCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: LRPLIHLICICRLGN*GCSPFQQVPSVLPD Trigger: ATCTGGAAGGACAGAAGGAACTTGCTGGAAGGGTGAGCAGCCTCAGTTGCCTAGTCTACAAATACAGATCAGATGTATTAGGGGCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 90 bp | TCAGGATCTTCAGGTCTCCACACAGTAGATCTTTCCTTCACAGATTaGGCAGCCAAACTATTCCCCATAGCTTGCAAGTCACGGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SGSSGLHTVDLSFTD*AAKLFPIACKSRAS Trigger: AGAAGCCCGTGACTTGCAAGCTATGGGGAATAGTTTGGCTGCTCAATCTGTGAAGGAAAGATCTACTGTGTGGAGACCTGAAGATCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 90 bp | ATGGCGATACAACTCTTGAAACCCATTGGGATAAACAGTATGTACTaGTATGTGGGAAGTAACCCTTCTTGGACCAACTGCAGACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: MAIQLLKPIGINSMY*YVGSNPSWTNCRLK Trigger: TTTGAGTCTGCAGTTGGTCCAAGAAGGGTTACTTCCCACATATCAGTACATACTGTTTATCCCAATGGGTTTCAAGAGTTGTATCGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 90 bp | CGATGTGACTCAGCTCCTGATTGGAAATTTCCAAATCATGTGGTATaGAGAACTTGCCTTCTTCACTGTGGATTCTCTGAAATGCATCTA | + |
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Preference number: 1 (lower is better) Translates to: RCDSAPDWKFPNHVV*RTCLLHCGFSEMHL Trigger: TAGATGCATTTCAGAGAATCCACAGTGAAGAAGGCAAGTTCTTCATACCACATGATTTGGAAATTTCCAATCAGGAGCTGAGTCACATCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CAA 90 bp | GCCCCACATCATAAAAGTTGCCACCATGAAGAACTGGGCACGTCCTaGTCTTCAGCTGCTCAGCTTGACACTCCTGTGAGGCACAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: APHHKSCHHEELGTS*SSAAQLDTPVRHSS Trigger: GGAGCTGTGCCTCACAGGAGTGTCAAGCTGAGCAGCTGAAGACAAGGACGTGCCCAGTTCTTCATGGTGGCAACTTTTATGATGTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACATCCATTCAGCTGCTCAGCTTaGCACTCCTGTGAGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: HCDQSTEDGWLLGSQEHPFSCSA*HSCEAQ Trigger: CTGTGCCTCACAGGAGTGTCAAGCTGAGCAGCTGAA...TGGATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCATCCTGATGGTGGGGGTCACAGCTGGAGACCTTGGACTCGGTGTCATGGCAGATTGCACAGCCACTaGTCCAAGTCTTGGCAAATC | + |
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Preference number: 2 (lower is better) Translates to: FHPDGGGHSWRPWTRCHGRLHSH*SKSWQI Trigger: GATTTGCCAAGACTTGGACCAGTGGCTGTGCAATCT...GCCATGACACCGAGTCCAAGGTCTCCAGCTGTGACCCCCACCATCAGGATGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAATAGCGGTGATCACTTCACTGGGGACAAATCTCAAGGCACTGATGTCACCCCGAGGATGGCTGGTTaGTTGGTTCTCAGGAACATC | + |
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Preference number: 2 (lower is better) Translates to: LNSGDHFTGDKSQGTDVTPRMAG*LVLRNI Trigger: GATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGG...GGTGACATCAGTGCCTTGAGATTTGTCCCCAGTGAAGTGATCACCGCTATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CAA 90 bp | CAGAGTGTAAACTACCACTGTGATCAGAGCACCGAGGATGGCTGGTaGCTTGGTTCTCAGGAACATCCAGTAGAGTTTAGCTGCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSVNYHCDQSTEDGW*LGSQEHPVEFSCIC Trigger: GCAGATGCAGCTAAACTCTACTGGATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTGGTAGTTTACACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAGAGGCACAGATCACAACCCCTAGGGCAGGAGTCAGTTTTATTAGAAATAGCTTGACACTCCTGTaGGGCACAGCTCCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FEEAQITTPRAGVSFIRNSLTLL*GTAPQL Trigger: CAGCTGGGGAGCTGTGCCTCACAGGAGTGTCAAGCT...ATTTCTAATAAAACTGACTCCTGCCCTAGGGGTTGTGATCTGTGCCTCTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR GCA 90 bp | ACTACCACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACCCAGTAGAGTTTAGCTaGATCTGCAATAGGTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TTTVIRAPRMAGCLVLRNPVEFS*ICNRCL Trigger: GAGACACCTATTGCAGATGCAGCTAAACTCTACTGG...GTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTGGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CAA 90 bp | AGATCTTTCCTTCACAGATTGAGCAGCCAAACTATTCCCCATAGCTaGCAAGTCACGGGCTTCTTTGAAGAGGCACAGATCACAACCCCT | + |
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Preference number: 2 (lower is better) Translates to: RSFLHRLSSQTIPHS*QVTGFFEEAQITTP Trigger: AGGGGTTGTGATCTGTGCCTCTTCAAAGAAGCCCGTGACTTGCAAGCTATGGGGAATAGTTTGGCTGCTCAATCTGTGAAGGAAAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CAA 90 bp | TTCAGGATCTTCAGGTCTCCACACAGTAGATCTTTCCTTCACAGATaGAGCAGCCAAACTATTCCCCATAGCTTGCAAGTCACGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: FRIFRSPHSRSFLHR*SSQTIPHSLQVTGF Trigger: GAAGCCCGTGACTTGCAAGCTATGGGGAATAGTTTGGCTGCTCAATCTGTGAAGGAAAGATCTACTGTGTGGAGACCTGAAGATCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CAA 90 bp | GAAGAGTTCAAACAAGAAAGACAAGCCAGGCTTCACGGCTTTCCTTaGAGGAAGTACCACAGAAACGCTTTCATGGAAATAGAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: EEFKQERQARLHGFP*RKYHRNAFMEIEPH Trigger: GTGGGGCTCTATTTCCATGAAAGCGTTTCTGTGGTACTTCCTCAAAGGAAAGCCGTGAAGCCTGGCTTGTCTTTCTTGTTTGAACTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CAA 90 bp | AATTCAAGTTCTGAAAATAAGGCCATCAATGTGAAGTGGAGGTGCTaGGACAACCTTCCAGATCCACAGCCATCTACACCTGAAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NSSSENKAINVKWRC*DNLPDPQPSTPEGQ Trigger: CTGCCCTTCAGGTGTAGATGGCTGTGGATCTGGAAGGTTGTCCAAGCACCTCCACTTCACATTGATGGCCTTATTTTCAGAACTTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCACAGATCACAACCCCTAGGGCAGGAGTCAGTTTTATTAGAAATATTCCCGGAGAAGGGGACACTTaGATTTTCCCTCTACTATAT | + |
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Preference number: 2 (lower is better) Translates to: EAQITTPRAGVSFIRNIPGEGDT*IFPLLY Trigger: ATATAGTAGAGGGAAAATTCAAGTGTCCCCTTCTCC...GGGAATATTTCTAATAAAACTGACTCCTGCCCTAGGGGTTGTGATCTGTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTCAGATCTTTTCACGATGTGACTCAGCTCCTGATTGGAAATTTCCAAATAGTCACGGGCTTCTTTaGAGAGGCACAGATCACAAC | + |
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Preference number: 2 (lower is better) Translates to: TAQIFSRCDSAPDWKFPNSHGLL*RGTDHN Trigger: GTTGTGATCTGTGCCTCTTCAAAGAAGCCCGTGACT...ATTTGGAAATTTCCAATCAGGAGCTGAGTCACATCGTGAAAAGATCTGAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTCACGAACCAGAGAGATGCCATCATCAGAAGGATGTACCAGAAGCTCTGACCACTGGTCCAAGTCTTaGCAAATCAAATTTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: ASRTREMPSSEGCTRSSDHWSKS*QIKFSI Trigger: AATAGAAAATTTGATTTGCCAAGACTTGGACCAGTG...GTCAGAGCTTCTGGTACATCCTTCTGATGATGGCATCTCTCTGGTTCGTGAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTCAGATCTTTTCACGATGTGACTCAGCTCCTGATTGGAAATTTCCAAATCTGGAATTTTGTAACTaGAGTGGAGAGGACCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TAQIFSRCDSAPDWKFPNLEFCN*SGEDPE Trigger: CTCTGGGTCCTCTCCACTCCAGTTACAAAATTCCAG...ATTTGGAAATTTCCAATCAGGAGCTGAGTCACATCGTGAAAAGATCTGAGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTATGCTCAGAGACTTCTTTCTCTTGGTAAGAAGCAAAGATTTCTCTCTGGCCATCAATGTGAAGTaGAGGTGCTTGGACAACCTT | + |
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Preference number: 2 (lower is better) Translates to: PFMLRDFFLLVRSKDFSLAINVK*RCLDNL Trigger: AAGGTTGTCCAAGCACCTCCACTTCACATTGATGGC...CAGAGAGAAATCTTTGCTTCTTACCAAGAGAAAGAAGTCTCTGAGCATAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR TCA 90 bp | CTACACAGAAAATATGATTCAGCTAAAAGGAAGAACAGCTACAACCTGAAGCCCACTATATTTGCCTGGTaGCATTCTATAAGCAACAGT | + |
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Preference number: 2 (lower is better) Translates to: LHRKYDSAKRKNSYNLKPTIFAW*HSISNS Trigger: ACTGTTGCTTATAGAATGTCACCAGGCAAATATAGT...GGGCTTCAGGTTGTAGCTGTTCTTCCTTTTAGCTGAATCATATTTTCTGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAAATATGATTCAGCTAAAAGGAAGAACAGCTACAACCTGAAGCCCAAAGTTCTCCACTATATTTaGCTGGTGACATTCTATAAG | + |
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Preference number: 2 (lower is better) Translates to: HRKYDSAKRKNSYNLKPKVLHYI*LVTFYK Trigger: CTTATAGAATGTCACCAGGCAAATATAGTGGAGAAC...TTTGGGCTTCAGGTTGTAGCTGTTCTTCCTTTTAGCTGAATCATATTTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| 3UTR TCA 72 bp | CGTCCTTGTCTTCAGCTGCTCAGCTTGACACTCCTGTaGGGCACAGCTCCCCAGCTGACTGAGCAGAGACAC | + |
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Preference number: 3 (lower is better) Translates to: RPCLQLLSLTLL*GTAPQLTEQRH Trigger: GTGTCTCTGCTCAGTCAGCTGGGGAGCTGTGCCTCACAGGAGTGTCAAGCTGAGCAGCTGAAGACAAGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTGGAGGTGCTTGGACAACCTTCCAGATCCACAGCCATCTACACCTGAAGGGGAGGAGGTAGGAGCCTaGGGGAGCCTTGTCCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: KWRCLDNLPDPQPSTPEGEEVGA*GSLVLE Trigger: CTCAAGGACAAGGCTCCCCAAGGCTCCTACCTCCTC...CCCTTCAGGTGTAGATGGCTGTGGATCTGGAAGGTTGTCCAAGCACCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 72 bp | CTTCTTGGACCAACTGCAGACTCAAAACTTTCATCCTaGTGGTGGGGGTCACAGCTGGAGACCTTGGACTCG | + |
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Preference number: 3 (lower is better) Translates to: LLGPTADSKLSS*WWGSQLETLDS Trigger: CGAGTCCAAGGTCTCCAGCTGTGACCCCCACCATCAGGATGAAAGTTTTGAGTCTGCAGTTGGTCCAAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR GCA 72 bp | CACAGCTGGAGACCTTGGACTCGGTGTCATGGCTTTTaGAGATGTAATCGTGCACTGCCACCTTCCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HSWRPWTRCHGF*RCNRALPPSFS Trigger: AGAGAAGGAAGGTGGCAGTGCACGATTACATCTGCAAAAGCCATGACACCGAGTCCAAGGTCTCCAGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACATCCAGAAGCTGTCCAGTTTTaGGTCATAAGGTCCTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: HCDQSTEDGWLLGSQEHPEAVQF*VIRSSE Trigger: CTCCGAGGACCTTATGACCAAAAACTGGACAGCTTC...TGGATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCATCCTGATGGTGGGGGTCACAGCTGGAGACCTTGGACTCGGTGTCATGGCATTAGAAATATTCCCTaGAGAAGAGTGGATCGCACC | + |
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Preference number: 3 (lower is better) Translates to: FHPDGGGHSWRPWTRCHGIRNIP*RRVDRT Trigger: GGTGCGATCCACTCTTCTCAAGGGAATATTTCTAAT...GCCATGACACCGAGTCCAAGGTCTCCAGCTGTGACCCCCACCATCAGGATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACATCCAACTATTCCCCATAGCTaGCAAGTCACGGGCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: HCDQSTEDGWLLGSQEHPTIPHS*QVTGFF Trigger: AAAGAAGCCCGTGACTTGCAAGCTATGGGGAATAGT...TGGATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CCA 72 bp | TTTCATCCTGATGGTGGGGGTCACAGCTGGAGACCTTaGACTCGGTGTCATGGCTTTTGCAGATGTAATCGT | + |
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Preference number: 3 (lower is better) Translates to: FHPDGGGHSWRP*TRCHGFCRCNR Trigger: ACGATTACATCTGCAAAAGCCATGACACCGAGTCCAAGGTCTCCAGCTGTGACCCCCACCATCAGGATGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR GCA 72 bp | GGTTCTCAGGAACATCCAGTAGAGTTTAGCTGCATCTaGAATAGGTGTCTCCCCATTATGTGCAAGTCGCCC | + |
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Preference number: 3 (lower is better) Translates to: GSQEHPVEFSCI*NRCLPIMCKSP Trigger: GGGCGACTTGCACATAATGGGGAGACACCTATTGCAGATGCAGCTAAACTCTACTGGATGTTCCTGAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CCA 72 bp | CTCAACAGTGTAGGAGTGAAACTGGAATTTTGTAACTaGAGTGGAGAGGACCCAGAGGAAAAGCCACTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LNSVGVKLEFCN*SGEDPEEKPLA Trigger: GGCCAGTGGCTTTTCCTCTGGGTCCTCTCCACTCCAGTTACAAAATTCCAGTTTCACTCCTACACTGTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAGTGGAGAGGACCCAGAGGAAAAGCCACTGGCCCAGGTAATGCAGGTAGAGTCTACTATATGGAAGTaGTTGTCACATACAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: WSGEDPEEKPLAQVMQVESTIWK*LSHTGK Trigger: CTTTCCTGTATGTGACAACAACTTCCATATAGTAGA...CTCTACCTGCATTACCTGGGCCAGTGGCTTTTCCTCTGGGTCCTCTCCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCTAAGGGCCCCAATACAATCACAGCCAGCTCTTCTCCGACATGAAGTGAAGTCACGGGCTTCTTaGAAGAGGCACAGATCACAA | + |
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Preference number: 3 (lower is better) Translates to: LELRAPIQSQPALLRHEVKSRAS*KRHRSQ Trigger: TTGTGATCTGTGCCTCTTCAAAGAAGCCCGTGACTT...CACTTCATGTCGGAGAAGAGCTGGCTGTGATTGTATTGGGGCCCTTAGCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 72 bp | CTTGGACAACCTTCCAGATCCACAGCCATCTACACCTaGAGGGCAGCAAACGGAAAACTGATATTTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LGQPSRSTAIYT*RAANGKLIFLQ Trigger: CTGGAGAAATATCAGTTTTCCGTTTGCTGCCCTTCAGGTGTAGATGGCTGTGGATCTGGAAGGTTGTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAATAGCGGTGATCACTTCACTGGGGACAAATCTCAAGGCACTGATGTCACCACCTTAAAATATAGATaGCACAGCCACTGGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LNSGDHFTGDKSQGTDVTTLKYR*HSHWSK Trigger: CTTGGACCAGTGGCTGTGCAATCTATATTTTAAGGT...GGTGACATCAGTGCCTTGAGATTTGTCCCCAGTGAAGTGATCACCGCTATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 72 bp | CAATACAATCACAGCCAGCTCTTCTCCGACATGAAGTaGAGAAGTCAGGTAGCAGAGCTCAACAGTGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: QYNHSQLFSDMK*RSQVAELNSVG Trigger: TCCTACACTGTTGAGCTCTGCTACCTGACTTCTTCACTTCATGTCGGAGAAGAGCTGGCTGTGATTGTATTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR GCA 72 bp | CGCTTTCATGGAAATAGAGCCCCACATCATAAAAGTTaGCACCATGAAGAACTGGGCACGTCCTTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: RFHGNRAPHHKS*HHEELGTSLSS Trigger: TGAAGACAAGGACGTGCCCAGTTCTTCATGGTGGCAACTTTTATGATGTGGGGCTCTATTTCCATGAAAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR TCA 72 bp | TCAGGTCTCCACACAGTAGATCTTTCCTTCACAGATTaGGCAGCCAAACTATTCCCCATAGCTTGCAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: SGLHTVDLSFTD*AAKLFPIACKS Trigger: TGACTTGCAAGCTATGGGGAATAGTTTGGCTGCTCAATCTGTGAAGGAAAGATCTACTGTGTGGAGACCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR-3UTR CAA 90 bp | TTAGAGCTAAGGGCCCCAATACAATCACAGCCAGCTCTTCTCCGACATGAAGTGACTATATGGAAGTTGTaGTCACATACAGGAAAGACT | + |
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Preference number: 3 (lower is better) Translates to: LELRAPIQSQPALLRHEVTIWKL*SHTGKT Trigger: AGTCTTTCCTGTATGTGACAACAACTTCCATATAGT...CACTTCATGTCGGAGAAGAGCTGGCTGTGATTGTATTGGGGCCCTTAGCTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| 3UTR CCA 72 bp | AATTCAAGTTCTGAAAATAAGGCCATCAATGTGAAGTaGAGGTGCTTGGACAACCTTCCAGATCCACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NSSSENKAINVK*RCLDNLPDPQP Trigger: TGGCTGTGGATCTGGAAGGTTGTCCAAGCACCTCCACTTCACATTGATGGCCTTATTTTCAGAACTTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| 3UTR TCA 72 bp | GGTATGAAGAACTTGCCTTCTTCACTGTGGATTCTCTaGAATGCATCTAATACCCAAGAGTCATTGTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: GMKNLPSSLWIL*NASNTQESLYN Trigger: GTTGTACAATGACTCTTGGGTATTAGATGCATTTCAGAGAATCCACAGTGAAGAAGGCAAGTTCTTCATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| 3UTR GCA 72 bp | TACTATATGGAAGTTGTTGTCACATACAGGAAAGACTaGCCAGCCCATAATCAGGTCATTGTAAGCATATGT | + |
|
Preference number: 3 (lower is better) Translates to: YYMEVVVTYRKD*PAHNQVIVSIC Trigger: ACATATGCTTACAATGACCTGATTATGGGCTGGGCAGTCTTTCCTGTATGTGACAACAACTTCCATATAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCTTGGTAAGAAGCAAAGATTTCTCTCTGCACAGTGTCCATTTCTCTTATCCACTGGTCCAAGTCTaGGCAAATCAAATTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FLLVRSKDFSLHSVHFSYPLVQV*ANQIFY Trigger: ATAGAAAATTTGATTTGCCAAGACTTGGACCAGTGG...ATAAGAGAAATGGACACTGTGCAGAGAGAAATCTTTGCTTCTTACCAAGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR TCA 90 bp | ACTACCACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACTTCCATCCTGTCTGCTaGCCTCCATCCGGCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TTTVIRAPRMAGCLVLRNFHPVC*PPSGTA Trigger: GGCAGTGCCGGATGGAGGTCAGCAGACAGGATGGAA...GTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTGGTAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACTGAGCAGAGACACTCGGAGGAGGTAGGAGCCTTGGGGAGCCTTGTCTTCCTCCTCCGTCAGTaGGTCAAAGTAATTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLTEQRHSEEVGALGSLVFLLRQ*VKVISA Trigger: AGCAGAAATTACTTTGACCCACTGACGGAGGAGGAA...GACAAGGCTCCCCAAGGCTCCTACCTCCTCCGAGTGTCTCTGCTCAGTCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACATCCACGTCTGGGTGATTCCTaGTCCAGTGTCTCCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCDQSTEDGWLLGSQEHPRLGDS*SSVSTF Trigger: AAAGGTGGAGACACTGGATCAGGAATCACCCAGACG...TGGATGTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTCAACCTTCAAGGCCCTGTCTGCACCATAGTCAAGAGTCTTAGCATTCTGCCACGAAGCTGTGTGTaGCCTGTACCCAGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVNLQGPVCTIVKSLSILPRSCV*PVPSGC Trigger: GCACCCACTGGGTACAGGTCACACACAGCTTCGTGG...CAGAATGCTAAGACTCTTGACTATGGTGCAGACAGGGCCTTGAAGGTTGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR CCA 90 bp | GTCAACCTTCAAGGCCCTGTCTGCACCATAGTCAAGAGTCTTAGCATTCTGGCACTGAAGTCACACCTTTaGGTCCCGCTGAAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNLQGPVCTIVKSLSILALKSHL*VPLKLA Trigger: TGCCAGCTTCAGCGGGACCCAAAGGTGTGACTTCAG...TGCCAGAATGCTAAGACTCTTGACTATGGTGCAGACAGGGCCTTGAAGGTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR TCA 90 bp | CAACTGAGGCTGCTCACCCTTCCAGCAAGTTCCTTCTGTCCTTCCAGATTCTTTCAGTGTCTCCACCTTTaGCCTTCCATCCTGTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRLLTLPASSFCPSRFFQCLHL*PSILSA Trigger: AGCAGACAGGATGGAAGGTCAAAGGTGGAGACACTG...AAAGAATCTGGAAGGACAGAAGGAACTTGCTGGAAGGGTGAGCAGCCTCAGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR GCA 90 bp | CAACTGAGGCTGCTCACCCTTCCAGCAAGTTCCTTCTGTCCTTCCAGATTCTTTTTGTGGAGTCTGATGTaGTGGGAGTTCTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QLRLLTLPASSFCPSRFFLWSLM*WEFWAA Trigger: AGCAGCCCAGAACTCCCAGCACATCAGACTCCACAA...AAAGAATCTGGAAGGACAGAAGGAACTTGCTGGAAGGGTGAGCAGCCTCAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTCAAGGCCCTGTCTGCACCATAGTCAAGAGTCTTAGCATTCTGGCATTCGTGACCTGTACCCAGTaGGTGCACAGATCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLQGPVCTIVKSLSILAFVTCTQ*VHRSSA Trigger: AGCTGAGGATCTGTGCACCCACTGGGTACAGGTCAC...GAATGCCAGAATGCTAAGACTCTTGACTATGGTGCAGACAGGGCCTTGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| 3UTR CAA 72 bp | CATAAAAGTTGCCACCATGAAGAACTGGGCACGTCCTaGTCTTCAGCTGCTCAGCTTGACACTCCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKSCHHEELGTS*SSAAQLDTPVR Trigger: CCTCACAGGAGTGTCAAGCTGAGCAGCTGAAGACAAGGACGTGCCCAGTTCTTCATGGTGGCAACTTTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCACAGATCACAACCCCTAGGGCAGGAGTCAGTTTTATTAGAAATATTCCCCATCCGGCACTGCCTTaGGTTTATTTCCTCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EAQITTPRAGVSFIRNIPHPALP*VYFLLR Trigger: ACGGAGGAGGAAATAAACTCAAGGCAGTGCCGGATG...GGGAATATTTCTAATAAAACTGACTCCTGCCCTAGGGGTTGTGATCTGTGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | CAACTGAGGCTGCTCACCCTTCCAGCAAGTTCCTTCTGTCCTTCCAGATTCTTTATGTGCTGGGAGTTCTaGGCTGCTCATGTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: QLRLLTLPASSFCPSRFFMCWEF*AAHVKT Trigger: GGTTTTAACATGAGCAGCCCAGAACTCCCAGCACAT...AAAGAATCTGGAAGGACAGAAGGAACTTGCTGGAAGGGTGAGCAGCCTCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | CAACTGAGGCTGCTCACCCTTCCAGCAAGTTCCTTCTGTCCTTCCAGATTCTTTCACAACTTTCTCTTGTaGAGTCTGATGTGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLRLLTLPASSFCPSRFFHNFLL*SLMCWE Trigger: CTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTG...AAAGAATCTGGAAGGACAGAAGGAACTTGCTGGAAGGGTGAGCAGCCTCAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| 3UTR CAA 72 bp | CTTCACAGATTGAGCAGCCAAACTATTCCCCATAGCTaGCAAGTCACGGGCTTCTTTGAAGAGGCACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLSSQTIPHS*QVTGFFEEAQI Trigger: GATCTGTGCCTCTTCAAAGAAGCCCGTGACTTGCAAGCTATGGGGAATAGTTTGGCTGCTCAATCTGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR GCA 90 bp | AGGAAGAACAGCTACAACCTGAAGCCCAAAATAAAATATCAACCTAGTTCTCCAGCACAGATCCTCAGCTaGATCACCCCCAACCCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKNSYNLKPKIKYQPSSPAQILS*ITPNPS Trigger: GCTAGGGTTGGGGGTGATGCAGCTGAGGATCTGTGC...TGGAGAACTAGGTTGATATTTTATTTTGGGCTTCAGGTTGTAGCTGTTCTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR CCA 90 bp | AACCTTCAAGGCCCTGTCTGCACCATAGTCAAGAGTCTTAGCATTCTGGCATTCCTGAAGCTGGCAGCCTaGATTTTTGTTGATGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLQGPVCTIVKSLSILAFLKLAA*IFVDEL Trigger: CAACTCATCAACAAAAATCCAGGCTGCCAGCTTCAG...GAATGCCAGAATGCTAAGACTCTTGACTATGGTGCAGACAGGGCCTTGAAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR GCA 90 bp | TCGGAGAAGGGGACACTTGAATTTTCCCTCTACTATATGGAAGTTGTTGTCACACTTCCTCATCCTCTTTaGAGGTATCCAGGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEKGTLEFSLYYMEVVVTLPHPL*RYPGSQ Trigger: CTGAGAGCCTGGATACCTGCAAAGAGGATGAGGAAG...TGTGACAACAACTTCCATATAGTAGAGGGAAAATTCAAGTGTCCCCTTCTCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | AGGAAGAACAGCTACAACCTGAAGCCCAAAATAAAATATCAACCTAGTTCTCCAACAGGCACGCTTGAGTaGAATGCCAGGTTCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKNSYNLKPKIKYQPSSPTGTLE*NARFPF Trigger: GAACGGGAACCTGGCATTCCACTCAAGCGTGCCTGT...TGGAGAACTAGGTTGATATTTTATTTTGGGCTTCAGGTTGTAGCTGTTCTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| 3UTR CAA 72 bp | TTCAGGTCTCCACACAGTAGATCTTTCCTTCACAGATaGAGCAGCCAAACTATTCCCCATAGCTTGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRSPHSRSFLHR*SSQTIPHSLQV Trigger: GACTTGCAAGCTATGGGGAATAGTTTGGCTGCTCAATCTGTGAAGGAAAGATCTACTGTGTGGAGACCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCCCAAAATAAAATATCAACCTAGTTCTCCACTATATTTGCCTGGTGACTTGTGGAGTCTGATGTaGTGGGAGTTCTGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKPKIKYQPSSPLYLPGDLWSLM*WEFWAA Trigger: AGCAGCCCAGAACTCCCAGCACATCAGACTCCACAA...GTCACCAGGCAAATATAGTGGAGAACTAGGTTGATATTTTATTTTGGGCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR CCA 90 bp | AACGCTTTCATGGAAATAGAGCCCCACATCATAAAAGTTGCCACCATGAAGAACTGTATTCATTTCCTTTaGGTCCCGCTGAAGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NAFMEIEPHIIKVATMKNCIHFL*VPLKLA Trigger: TGCCAGCTTCAGCGGGACCCAAAGGAAATGAATACA...GTTCTTCATGGTGGCAACTTTTATGATGTGGGGCTCTATTTCCATGAAAGCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTCATTGTAAGCATATGTTCCATGGAGAAGGAAGAGTTCAAACAAGAAAGAACCTCCATCCGGCACTaGCTTGAGTTTATTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVIVSICSMEKEEFKQERTSIRH*LEFISS Trigger: GGAGGAAATAAACTCAAGGCAGTGCCGGATGGAGGT...TCTTTCTTGTTTGAACTCTTCCTTCTCCATGGAACATATGCTTACAATGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | CTACACAGAAAATATGATTCAGCTAAAAGGAAGAACAGCTACAACCTGAAGCCCCACAACTTTCTCTTGTaGAGTCTGATGTGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHRKYDSAKRKNSYNLKPHNFLL*SLMCWE Trigger: CTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTG...GGGCTTCAGGTTGTAGCTGTTCTTCCTTTTAGCTGAATCATATTTTCTGTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| 3UTR CAA 72 bp | AAACAAGAAAGACAAGCCAGGCTTCACGGCTTTCCTTaGAGGAAGTACCACAGAAACGCTTTCATGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KQERQARLHGFP*RKYHRNAFMEI Trigger: TATTTCCATGAAAGCGTTTCTGTGGTACTTCCTCAAAGGAAAGCCGTGAAGCCTGGCTTGTCTTTCTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAAAATATGATTCAGCTAAAAGGAAGAACAGCTACAACCTGAAGCCCAAAATGTGCTGGGAGTTCTaGGCTGCTCATGTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: HRKYDSAKRKNSYNLKPKMCWEF*AAHVKT Trigger: GGTTTTAACATGAGCAGCCCAGAACTCCCAGCACAT...TTTGGGCTTCAGGTTGTAGCTGTTCTTCCTTTTAGCTGAATCATATTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTTCTCCACTATATTTGCCTGGTGACATTCTATAAGCAACAGTGTCAACCTTTTTTGTTGATGAGTTaGAAGGGTGTGATCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLHYICLVTFYKQQCQPFLLMS*KGVIQH Trigger: ATGCTGGATCACACCCTTGCAACTCATCAACAAAAA...AGGTTGACACTGTTGCTTATAGAATGTCACCAGGCAAATATAGTGGAGAACTAG 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTGGTAAGAAGCAAAGATTTCTCTCTGCACAGTGTCCATTTCTCTTATTTTTTGTTGATGAGTTaGAAGGGTGTGATCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLVRSKDFSLHSVHFSYFLLMS*KGVIQH Trigger: ATGCTGGATCACACCCTTGCAACTCATCAACAAAAA...ATAAGAGAAATGGACACTGTGCAGAGAGAAATCTTTGCTTCTTACCAAGAGAAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS TCA 90 bp | GAGCTCTGTCCTGATGAAGAACCTGCAAGCAGAACAGCGCCTCTCTaGGCTTGCCTCTCAGAGTCCTCAGTGTACCCAGGAGCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELCPDEEPASRTAPL*ACLSESSVYPGASS Trigger: GGAAGATGCTCCTGGGTACACTGAGGACTCTGAGAGGCAAGCTCAGAGAGGCGCTGTTCTGCTTGCAGGTTCTTCATCAGGACAGAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS GCA 90 bp | GAAGCTGTGTGTGACCTGTACCCAGTGGGTGCACAGATCCTCAGCTaGATCACCCCCAACCCTAGCCCCAAACAAATCTTCCACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EAVCDLYPVGAQILS*ITPNPSPKQIFHRS Trigger: GCTTCTGTGGAAGATTTGTTTGGGGCTAGGGTTGGGGGTGATGCAGCTGAGGATCTGTGCACCCACTGGGTACAGGTCACACACAGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR CAA 90 bp | ACCATTAAGCACACTGGACGTTCTGGAGAAAGCTGCCTGCGGCTCTCAGGGCTTCCATCCGGCACTGCCTaGAGTTTATTTCCTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TIKHTGRSGESCLRLSGLPSGTA*SLFPPP Trigger: CGGAGGAGGAAATAAACTCAAGGCAGTGCCGGATGG...AAGCCCTGAGAGCCGCAGGCAGCTTTCTCCAGAACGTCCAGTGTGCTTAATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS CCA 90 bp | AGCCCCAAACAAATCTTCCACAGAAGCTGTACAGGCACGCTTGAGTaGAATGCCAGGTTCCCGTTCAGGACACCCAGGTCGGATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPKQIFHRSCTGTLE*NARFPFRTPRSDEK Trigger: CTTCTCATCCGACCTGGGTGTCCTGAACGGGAACCTGGCATTCCACTCAAGCGTGCCTGTACAGCTTCTGTGGAAGATTTGTTTGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS TCA 90 bp | TCTTTGCAGGTATCCAGGCTCTCAGTGGAACGTCTGGGTGATTCCTaGTCCAGTGTCTCCACCTTTGACCTTCCATCCTGTCTGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SLQVSRLSVERLGDS*SSVSTFDLPSCLLT Trigger: GGTCAGCAGACAGGATGGAAGGTCAAAGGTGGAGACACTGGATCAGGAATCACCCAGACGTTCCACTGAGAGCCTGGATACCTGCAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
||
| CDS TCA 90 bp | AAATCCTGTCCTGATGAAGAACCTGCAAGCAGAACAGCGCCTCTCTaGGCTTGCCTCTCAGAGTCCTCAGTGTACCCAGGAGCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSCPDEEPASRTAPL*ACLSESSVYPGASS Trigger: GGAAGATGCTCCTGGGTACACTGAGGACTCTGAGAGGCAAGCTCAGAGAGGCGCTGTTCTGCTTGCAGGTTCTTCATCAGGACAGGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054635.8 |
||
| CDS GCA 90 bp | TCTCAGAGTCCTCAGTGTACCCAGGAGCATCTTCCTCATCCTCTTTaGAGGTATCCAGGCTCTCAGTGGAACGTCTGGGTGATTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SQSPQCTQEHLPHPL*RYPGSQWNVWVIPD Trigger: ATCAGGAATCACCCAGACGTTCCACTGAGAGCCTGGATACCTGCAAAGAGGATGAGGAAGATGCTCCTGGGTACACTGAGGACTCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
||
| CDS CCA 90 bp | CTTCCTCATCCTCTTTGCAGGTATCCAGGCTCTCAGTGGAACGTCTaGGTGATTCCTGATCCAGTGTCTCCACCTTTGACCTTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPHPLCRYPGSQWNV*VIPDPVSPPLTFHP Trigger: AGGATGGAAGGTCAAAGGTGGAGACACTGGATCAGGAATCACCCAGACGTTCCACTGAGAGCCTGGATACCTGCAAAGAGGATGAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
||
| CDS CCA 90 bp | TGGAGTCTGATGTGCTGGGAGTTCTGGGCTGCTCATGTTAAAACCTaGATTCCCGGCACCTTCGGTAGCGTCCGTGTATTCTTTAACCAT | + |
|
Preference number: 5 (lower is better) Translates to: WSLMCWEFWAAHVKT*IPGTFGSVRVFFNH Trigger: ATGGTTAAAGAATACACGGACGCTACCGAAGGTGCCGGGAATCCAGGTTTTAACATGAGCAGCCCAGAACTCCCAGCACATCAGACTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
||
| CDS CCA 90 bp | CAGCATGTCATGTCTCACAACTTTCTCTTGTGGAGTCTGATGTGCTaGGAGTTCTGGGCTGCTCATGTTAAAACCTGGATTCCCGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: QHVMSHNFLLWSLMC*EFWAAHVKTWIPGT Trigger: GGTGCCGGGAATCCAGGTTTTAACATGAGCAGCCCAGAACTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTGAGACATGACATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
||
| CDS CCA 90 bp | TCAGGACTGAAGTCACACCTTTGGGTCCCGCTGAAGCTGGCAGCCTaGATTTTTGTTGATGAGTTGCAAGGGTGTGATCCAGCATGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGLKSHLWVPLKLAA*IFVDELQGCDPACH Trigger: ATGACATGCTGGATCACACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCAGCTTCAGCGGGACCCAAAGGTGTGACTTCAGTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
||
| CDS-3UTR CAA 90 bp | ACTACCACTGTGATCAGAGCACCGAGGATGGCTGGTTGCTTGGTTCTCAGGAACCAGCCTGGATTTTTGTaGATGAGTTGCAAGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTTVIRAPRMAGCLVLRNQPGFL*MSCKGV Trigger: CACACCCTTGCAACTCATCAACAAAAATCCAGGCTG...GTTCCTGAGAACCAAGCAACCAGCCATCCTCGGTGCTCTGATCACAGTGGTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS-3UTR CAA 90 bp | GCCTCACGAACCAGAGAGATGCCATCATCAGAAGGATGTACCAGAAGCTCTGACTCTTCCTCATCCTCTTaGCAGGTATCCAGGCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASRTREMPSSEGCTRSSDSSSSS*QVSRLS Trigger: TGAGAGCCTGGATACCTGCAAAGAGGATGAGGAAGA...GTCAGAGCTTCTGGTACATCCTTCTGATGATGGCATCTCTCTGGTTCGTGAGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
||
| CDS GCA 90 bp | ATCCAGCATGTCATGTCTCACAACTTTCTCTTGTGGAGTCTGATGTaGTGGGAGTTCTGGGCTGCTCATGTTAAAACCTGGATTCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQHVMSHNFLLWSLM*WEFWAAHVKTWIPG Trigger: GCCGGGAATCCAGGTTTTAACATGAGCAGCCCAGAACTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTGAGACATGACATGCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
||
| CDS CCA 90 bp | TGCAAGGGTGTGATCCAGCATGTCATGTCTCACAACTTTCTCTTGTaGAGTCTGATGTGCTGGGAGTTCTGGGCTGCTCATGTTAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: CKGVIQHVMSHNFLL*SLMCWEFWAAHVKT Trigger: GGTTTTAACATGAGCAGCCCAGAACTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTGAGACATGACATGCTGGATCACACCCTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
||
| CDS-3UTR CAA 90 bp | AACGCTTTCATGGAAATAGAGCCCCACATCATAAAAGTTGCCACCATGAAGAACAGCGCCTCTCTGAGCTaGCCTCTCAGAGTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NAFMEIEPHIIKVATMKNSASLS*PLRVLS Trigger: ACTGAGGACTCTGAGAGGCAAGCTCAGAGAGGCGCT...GTTCTTCATGGTGGCAACTTTTATGATGTGGGGCTCTATTTCCATGAAAGCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| CDS TCA 90 bp | GCAAGTTCCTTCTGTCCTTCCAGATTCTTTAGTCACTTCTGGAAATaGGCGTTGCCCCTTGTCACTAGCCTTTGTGTAAGGATTCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: ASSFCPSRFFSHFWK*ALPLVTSLCVRIPV Trigger: GACGGGAATCCTTACACAAAGGCTAGTGACAAGGGGCAACGCTCATTTCCAGAAGTGACTAAAGAATCTGGAAGGACAGAAGGAACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054635.8 |
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| CDS CCA 90 bp | TTCTGCTGTATTCATTTCCTTTGGGTCCCGCTGAAGCTGGCAGCCTaGATTTTTGTTGATGAGTTGCAAGGGTGTGATCCAGCATGTCAT | + |
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Preference number: 5 (lower is better) Translates to: FCCIHFLWVPLKLAA*IFVDELQGCDPACH Trigger: ATGACATGCTGGATCACACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCAGCTTCAGCGGGACCCAAAGGAAATGAATACAGCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
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| CDS-3UTR CAA 90 bp | AATATCAACCTAGTTCTCCACTATATTTGCCTGGTGACATTCTATAAGCAACAGACTGAAGTCACACCTTaGGGTCCCGCTGAAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: NINLVLHYICLVTFYKQQTEVTP*GPAEAG Trigger: GCCAGCTTCAGCGGGACCCAAAGGTGTGACTTCAGT...CTGTTGCTTATAGAATGTCACCAGGCAAATATAGTGGAGAACTAGGTTGATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS TCA 90 bp | TGTAAGGATTCCCGTCTGCAGTGCACAGCTGACTCGGAGCTTTCTTaGATGCTTTTTCTTTCTTTAAACATGACATGGGAATGTTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: CKDSRLQCTADSELS*MLFLSLNMTWECSG Trigger: GCCAGAACATTCCCATGTCATGTTTAAAGAAAGAAAAAGCATTCAAGAAAGCTCCGAGTCAGCTGTGCACTGCAGACGGGAATCCTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054635.8 |
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| CDS-3UTR CAA 90 bp | CTGAAGCCCAAAATAAAATATCAACCTAGTTCTCCACTATATTTGCCTGGTGACCAGCCTGGATTTTTGTaGATGAGTTGCAAGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LKPKIKYQPSSPLYLPGDQPGFL*MSCKGV Trigger: CACACCCTTGCAACTCATCAACAAAAATCCAGGCTG...GTCACCAGGCAAATATAGTGGAGAACTAGGTTGATATTTTATTTTGGGCTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS-3UTR CAA 90 bp | CTGAAGCCCAAAATAAAATATCAACCTAGTTCTCCACTATATTTGCCTGGTGACTGGCAGCCTGGATTTTaGTTGATGAGTTGCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: LKPKIKYQPSSPLYLPGDWQPGF*LMSCKG Trigger: ACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCA...GTCACCAGGCAAATATAGTGGAGAACTAGGTTGATATTTTATTTTGGGCTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS-3UTR CAA 90 bp | CAGGTCATTGTAAGCATATGTTCCATGGAGAAGGAAGAGTTCAAACAAGAAAGATGGCAGCCTGGATTTTaGTTGATGAGTTGCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QVIVSICSMEKEEFKQERWQPGF*LMSCKG Trigger: ACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCA...TCTTTCTTGTTTGAACTCTTCCTTCTCCATGGAACATATGCTTACAATGACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224909.2 |
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| CDS CCA 72 bp | CCTTCACCCACGAAGCTGTGTGTGACCTGTACCCAGTaGGTGCACAGATCCTCAGCTGCATCACCCCCAACC | + |
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Preference number: 6 (lower is better) Translates to: PSPTKLCVTCTQ*VHRSSAASPPT Trigger: GGTTGGGGGTGATGCAGCTGAGGATCTGTGCACCCACTGGGTACAGGTCACACACAGCTTCGTGGGTGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CAA 90 bp | ACCCTAGCCCCAAACAAATCTTCCACAGAAGCTGTACAGGCACGCTaGAGTGGAATGCCAGGTTCCCGTTCAGGACACCCAGGTCGGATG | + |
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Preference number: 6 (lower is better) Translates to: TLAPNKSSTEAVQAR*SGMPGSRSGHPGRM Trigger: CATCCGACCTGGGTGTCCTGAACGGGAACCTGGCATTCCACTCAAGCGTGCCTGTACAGCTTCTGTGGAAGATTTGTTTGGGGCTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS TCA 72 bp | CCTGATGAAGAACCTGCAAGCAGAACAGCGCCTCTCTaGGCTTGCCTCTCAGAGTCCTCAGTGTACCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PDEEPASRTAPL*ACLSESSVYPG Trigger: TCCTGGGTACACTGAGGACTCTGAGAGGCAAGCTCAGAGAGGCGCTGTTCTGCTTGCAGGTTCTTCATCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
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| CDS GCA 72 bp | GACCTTCCATCCTGTCTGCTGACCTCCATCCGGCACTaGCTTGAGTTTATTTCCTCCTCCGTCAGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: DLPSCLLTSIRH*LEFISSSVSGS Trigger: TGACCCACTGACGGAGGAGGAAATAAACTCAAGGCAGTGCCGGATGGAGGTCAGCAGACAGGATGGAAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
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| CDS GCA 72 bp | CCTCAGTGTACCCAGGAGCATCTTCCTCATCCTCTTTaGAGGTATCCAGGCTCTCAGTGGAACGTCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PQCTQEHLPHPL*RYPGSQWNVWV Trigger: CACCCAGACGTTCCACTGAGAGCCTGGATACCTGCAAAGAGGATGAGGAAGATGCTCCTGGGTACACTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
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| CDS GCA 72 bp | TGTGACCTGTACCCAGTGGGTGCACAGATCCTCAGCTaGATCACCCCCAACCCTAGCCCCAAACAAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: CDLYPVGAQILS*ITPNPSPKQIF Trigger: GAAGATTTGTTTGGGGCTAGGGTTGGGGGTGATGCAGCTGAGGATCTGTGCACCCACTGGGTACAGGTCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CCA 72 bp | CAAATCTTCCACAGAAGCTGTACAGGCACGCTTGAGTaGAATGCCAGGTTCCCGTTCAGGACACCCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: QIFHRSCTGTLE*NARFPFRTPRS Trigger: CGACCTGGGTGTCCTGAACGGGAACCTGGCATTCCACTCAAGCGTGCCTGTACAGCTTCTGTGGAAGATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CCA 72 bp | ATGTGCTGGGAGTTCTGGGCTGCTCATGTTAAAACCTaGATTCCCGGCACCTTCGGTAGCGTCCGTGTATTC | + |
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Preference number: 6 (lower is better) Translates to: MCWEFWAAHVKT*IPGTFGSVRVF Trigger: GAATACACGGACGCTACCGAAGGTGCCGGGAATCCAGGTTTTAACATGAGCAGCCCAGAACTCCCAGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
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| CDS CAA 72 bp | TCCTCAGTGTACCCAGGAGCATCTTCCTCATCCTCTTaGCAGGTATCCAGGCTCTCAGTGGAACGTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SSVYPGASSSSS*QVSRLSVERLG Trigger: ACCCAGACGTTCCACTGAGAGCCTGGATACCTGCAAAGAGGATGAGGAAGATGCTCCTGGGTACACTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054635.8 ENSMUST00000224909.2 |
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| CDS TCA 72 bp | CAAACAAATCTTCCACAGAAGCTGTACAGGCACGCTTaGGTGGAATGCCAGGTTCCCGTTCAGGACACCCAG | + |
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Preference number: 6 (lower is better) Translates to: QTNLPQKLYRHA*VECQVPVQDTQ Trigger: CTGGGTGTCCTGAACGGGAACCTGGCATTCCACTCAAGCGTGCCTGTACAGCTTCTGTGGAAGATTTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CAA 72 bp | GCAAGTGTGAGCACAATCAGGACTGAAGTCACACCTTaGGGTCCCGCTGAAGCTGGCAGCCTGGATTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: ASVSTIRTEVTP*GPAEAGSLDFC Trigger: ACAAAAATCCAGGCTGCCAGCTTCAGCGGGACCCAAAGGTGTGACTTCAGTCCTGATTGTGCTCACACTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CAA 72 bp | CCAAACAAATCTTCCACAGAAGCTGTACAGGCACGCTaGAGTGGAATGCCAGGTTCCCGTTCAGGACACCCA | + |
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Preference number: 6 (lower is better) Translates to: PNKSSTEAVQAR*SGMPGSRSGHP Trigger: TGGGTGTCCTGAACGGGAACCTGGCATTCCACTCAAGCGTGCCTGTACAGCTTCTGTGGAAGATTTGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CCA 72 bp | AAGTCACACCTTTGGGTCCCGCTGAAGCTGGCAGCCTaGATTTTTGTTGATGAGTTGCAAGGGTGTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: KSHLWVPLKLAA*IFVDELQGCDP Trigger: TGGATCACACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCAGCTTCAGCGGGACCCAAAGGTGTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224813.2 |
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| CDS CAA 72 bp | GGTGTGATCCAGCATGTCATGTCTCACAACTTTCTCTaGTGGAGTCTGATGTGCTGGGAGTTCTGGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GVIQHVMSHNFL*WSLMCWEFWAA Trigger: AGCAGCCCAGAACTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTGAGACATGACATGCTGGATCACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
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| CDS CCA 72 bp | GTGATCCAGCATGTCATGTCTCACAACTTTCTCTTGTaGAGTCTGATGTGCTGGGAGTTCTGGGCTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VIQHVMSHNFLL*SLMCWEFWAAH Trigger: ATGAGCAGCCCAGAACTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTGAGACATGACATGCTGGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
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| CDS CAA 72 bp | CCGCTGAAGCTGGCAGCCTGGATTTTTGTTGATGAGTaGCAAGGGTGTGATCCAGCATGTCATGTCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: PLKLAAWIFVDE*QGCDPACHVSQ Trigger: TTGTGAGACATGACATGCTGGATCACACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCAGCTTCAGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
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| CDS CAA 90 bp | CTTTGGGTCCCGCTGAAGCTGGCAGCCTGGATTTTTGTTGATGAGTaGCAAGGGTGTGATCCAGCATGTCATGTCTCACAACTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LWVPLKLAAWIFVDE*QGCDPACHVSQLSL Trigger: AAGAGAAAGTTGTGAGACATGACATGCTGGATCACACCCTTGCAACTCATCAACAAAAATCCAGGCTGCCAGCTTCAGCGGGACCCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
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| CDS CAA 90 bp | AGTTGCAAGGGTGTGATCCAGCATGTCATGTCTCACAACTTTCTCTaGTGGAGTCTGATGTGCTGGGAGTTCTGGGCTGCTCATGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SCKGVIQHVMSHNFL*WSLMCWEFWAAHVK Trigger: TTTAACATGAGCAGCCCAGAACTCCCAGCACATCAGACTCCACAAGAGAAAGTTGTGAGACATGACATGCTGGATCACACCCTTGCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054635.8 ENSMUST00000224813.2 ENSMUST00000224909.2 |
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| CDS TCA 72 bp | TTCTGTCCTTCCAGATTCTTTAGTCACTTCTGGAAATaGGCGTTGCCCCTTGTCACTAGCCTTTGTGTAAGG | + |
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Preference number: 6 (lower is better) Translates to: FCPSRFFSHFWK*ALPLVTSLCVR Trigger: CCTTACACAAAGGCTAGTGACAAGGGGCAACGCTCATTTCCAGAAGTGACTAAAGAATCTGGAAGGACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054635.8 |
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