Pregenerated sensors for ODF3L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035963Ensembl transcript IDs: ENSMUST00000095464.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCATGTCCAGCCAGGGAAAGGGACACTTCTCCCTGGCCTGGTCTaGCCTGGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTTGGG | + |
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Preference number: 1 (lower is better) Translates to: LHVQPGKGTLLPGLV*PGKEAQPHPLWRLG Trigger: CCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCTTTCCCTGGCTGGACATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR CCA 90 bp | TGTCCAGCCAGGGAAAGGGACACTTCTCCCTGGCCTGGTCTGACCTaGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTTGGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: CPARERDTSPWPGLT*EGGSTSPSMETWVT Trigger: TGTGACCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCTTTCCCTGGCTGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGTCTGACCTGGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTTGGGTCAAAGGACCTCGGACTaGAGACGGGGAGGGAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: AWSDLGRRLNLTLYGDLGQRTSD*RRGGRH Trigger: GTGCCTCCCTCCCCGTCTTCAGTCCGAGGTCCTTTG...ACCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR TCA 90 bp | GTGAGAAGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCAAGCGGCCTGGACACTaGATTCTAGGACACACGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRRAETAGPPPGEFSGLIKRPGH*ILGHTA Trigger: AGCCGTGTGTCCTAGAATTCAGTGTCCAGGCCGCTT...GATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCTTCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGAAGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCCAACCTCACCCTCTATaGAGACTTGGGTCACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VRRAETAGPPPGEFSGLIQPHPL*RLGSQA Trigger: GGCCTGTGACCCAAGTCTCCATAGAGGGTGAGGTTG...GATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCTTCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGGTCACAGGCCCCAGGGACAGAAAGATCAGGTGGCCTCAAAGGACCTCGTCCTCTGTTCCACTCTaGGGAAACGGCCCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: TWVTGPRDRKIRWPQRTSSSVPL*GNGPGE Trigger: CTCTCCTGGGCCGTTTCCTCAGAGTGGAACAGAGGA...CGAGGTCCTTTGAGGCCACCTGATCTTTCTGTCCCTGGGGCCTGTGACCCAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGACACTTCTCCCTGGCCTGGTCTGACCTGGGAAGGAGGCTCAACCTCACCCGACAGAAAGATCAGGTaGCCTCAAAGGACCTCGGAC | + |
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Preference number: 2 (lower is better) Translates to: RDTSPWPGLTWEGGSTSPDRKIR*PQRTSD Trigger: GTCCGAGGTCCTTTGAGGCCACCTGATCTTTCTGTC...GGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR CCA 90 bp | AGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAAACCCAATGGCCTGGTCTGACCTaGGAAGGAGGCTCAACCTCA | + |
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Preference number: 2 (lower is better) Translates to: RLQGHLQESSPASSAETQWPGLT*EGGSTS Trigger: TGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGCCA...TTGGGTTTCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR TCA 72 bp | GAAGACGGGGAGGGAGGCACCTCCTCTGTTCCACTCTaGGGAAACGGCCCAGGAGAGGCCCCGGCTGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: EDGEGGTSSVPL*GNGPGEAPAAC Trigger: ACAGGCAGCCGGGGCCTCTCCTGGGCCGTTTCCTCAGAGTGGAACAGAGGAGGTGCCTCCCTCCCCGTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAACCCTCTATGGAGACTaGGGTCACAGGCCCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RAETAGPPPGEFSGLICRTLYGD*GHRPQG Trigger: TCCCTGGGGCCTGTGACCCAAGTCTCCATAGAGGGT...TCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR CCA 72 bp | TGGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTTaGGTCACAGGCCCCAGGGACAGAAAGATCAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: WEGGSTSPSMET*VTGPRDRKIRW Trigger: CCACCTGATCTTTCTGTCCCTGGGGCCTGTGACCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR CCA 72 bp | AGGGAAAGGGACACTTCTCCCTGGCCTGGTCTGACCTaGGAAGGAGGCTCAACCTCACCCTCTATGGAGACT | + |
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Preference number: 3 (lower is better) Translates to: RERDTSPWPGLT*EGGSTSPSMET Trigger: AGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCTTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | AGGGACACTTCTCCCTGGCCTGGTCTGACCTGGGAAGGAGGCTCAACCTCACCCTGGCCCGGCCCTGCATaGAGTAGGCAGGGGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: RDTSPWPGLTWEGGSTSPWPGPA*SRQGDS Trigger: GCTGTCCCCCTGCCTACTCCATGCAGGGCCGGGCCA...GGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | GGGGTGAGAAGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATTCCGCTGGCGTACTaGGGGTGCCTTCTCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVRRAETAGPPPGEFSGLIPLAY*GCLLWA Trigger: AGCCCAGAGAAGGCACCCCCAGTACGCCAGCGGAAT...GAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCTTCTCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | CACCTCCTCTGTTCCACTCTGAGGAAACGGCCCAGGAGAGGCCCCGGCTGCCTGGCCCAGAGTGAAAGCTaGGGCATTCCGCTGGCGTAC | + |
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Preference number: 4 (lower is better) Translates to: HLLCSTLRKRPRRGPGCLAQSES*GIPLAY Trigger: GTACGCCAGCGGAATGCCCCAGCTTTCACTCTGGGC...CAGGCAGCCGGGGCCTCTCCTGGGCCGTTTCCTCAGAGTGGAACAGAGGAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR TCA 90 bp | AGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAGGCGAGAGCCCAGAGTaGAAGCTGGGGCATTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RAETAGPPPGEFSGLICRGESPE*KLGHSA Trigger: AGCGGAATGCCCCAGCTTTCACTCTGGGCTCTCGCC...TCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR TCA 90 bp | AGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAAACCCAATCACCTCCAGACCTCTaGCCTTGGCCCGGCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RLQGHLQESSPASSAETQSPPDL*PWPGPA Trigger: TGCAGGGCCGGGCCAAGGTCAGAGGTCTGGAGGTGA...TTGGGTTTCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | AGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAAACCCAAGGTCAGCCTAGCCTCTaGGTCGCAGCTGAGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RLQGHLQESSPASSAETQGQPSL*VAAEGP Trigger: GGGACCCTCAGCTGCGACCCAGAGGCTAGGCTGACC...TTGGGTTTCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | CAGGGACAGAAAGATCAGGTGGCCTCAAAGGACCTCGGACTGAAGACGGGGAGGTGGGGGTGCCTTCTCTaGGCTGTAGGCCCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QGQKDQVASKDLGLKTGRWGCLL*AVGPRS Trigger: GGACCTGGGGCCTACAGCCCAGAGAAGGCACCCCCA...CCTCCCCGTCTTCAGTCCGAGGTCCTTTGAGGCCACCTGATCTTTCTGTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | CAGGGACAGAAAGATCAGGTGGCCTCAAAGGACCTCGGACTGAAGACGGGGAGGGGAGAGGTGCTTCACTaGGCCTCCGAGCGAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: QGQKDQVASKDLGLKTGRGEVLH*ASERGS Trigger: ACTCCCTCGCTCGGAGGCCCAGTGAAGCACCTCTCC...CCTCCCCGTCTTCAGTCCGAGGTCCTTTGAGGCCACCTGATCTTTCTGTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | CTTGGGTCACAGGCCCCAGGGACAGAAAGATCAGGTGGCCTCAAAGGACCTCGGCGATCCCCAGAGGGGTaGCATGGTGTAGGCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: LGSQAPGTERSGGLKGPRRSPEG*HGVGIG Trigger: CCCAATGCCTACACCATGCCACCCCTCTGGGGATCG...CCGAGGTCCTTTGAGGCCACCTGATCTTTCTGTCCCTGGGGCCTGTGACCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | AGCCAGGGAAAGGGACACTTCTCCCTGGCCTGGTCTGACCTGGGAAGGAGGCTCGCTGCCGGTAGGTGTTaGGGTCCGGACTCTCATACT | + |
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Preference number: 4 (lower is better) Translates to: SQGKGHFSLAWSDLGRRLAAGRC*GPDSHT Trigger: AGTATGAGAGTCCGGACCCCAACACCTACCGGCAGC...GAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCTTTCCCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | GGTGGGGTGAGAAGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCAACAGTGACCTGTTCTaGGTTGTGGGTACCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: GGVRRAETAGPPPGEFSGNSDLF*VVGTRT Trigger: GGTCCTGGTACCCACAACCCAGAACAGGTCACTGTT...GCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCTTCTCACCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR GCA 90 bp | GTGAGAAGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTCCGGACTCTCATACTaGCCAGGGCCTGGAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: VRRAETAGPPPGEFSGLISGLSY*PGPGIS Trigger: AGAGATTCCAGGCCCTGGGCAGTATGAGAGTCCGGA...GATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCTTCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | GGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAAGCATGGTGTAGGCATTaGGGGCAGGAACAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GQRLQGHLQESSPASSAEAWCRH*GQEQRC Trigger: ACACCTCTGTTCCTGCCCCCAATGCCTACACCATGC...TTCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR GCA 90 bp | AGCCAGGGAAAGGGACACTTCTCCCTGGCCTGGTCTGACCTGGGAAGGAGGCTCGGTTTGATAAAGATCTaGGATCCCCAGAGGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SQGKGHFSLAWSDLGRRLGLIKI*DPQRGG Trigger: GCCACCCCTCTGGGGATCGCAGATCTTTATCAAACC...GAGCCTCCTTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCTTTCCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | CCATGTCCAGCCAGGGAAAGGGACACTTCTCCCTGGCCTGGTCTGACCTGGGAAGAAGTAGACAGGTCCTaGGCTGGAATCCTGGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: PCPARERDTSPWPGLTWEEVDRS*AGILER Trigger: CCTCTCCAGGATTCCAGCCCAGGACCTGTCTACTTC...TTCCCAGGTCAGACCAGGCCAGGGAGAAGTGTCCCTTTCCCTGGCTGGACATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGTCTGACCTGGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTTGGGTACCTGTTCTGGGTTGTaGGTACCAGGACCAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AWSDLGRRLNLTLYGDLGTCSGL*VPGPGV Trigger: CACACCTGGTCCTGGTACCCACAACCCAGAACAGGT...ACCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| 3UTR CAA 72 bp | CTGGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTaGGGTCACAGGCCCCAGGGACAGAAAGATCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LGRRLNLTLYGD*GHRPQGQKDQV Trigger: CACCTGATCTTTCTGTCCCTGGGGCCTGTGACCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR TCA 90 bp | CACAGGCCCCAGGGACAGAAAGATCAGGTGGCCTCAAAGGACCTCGGACTGAAGGATGCCCGCTTTGAGTaGCGGATGCCCATGGTATAT | + |
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Preference number: 4 (lower is better) Translates to: HRPQGQKDQVASKDLGLKDARFE*RMPMVY Trigger: ATATACCATGGGCATCCGTCACTCAAAGCGGGCATC...CTTCAGTCCGAGGTCCTTTGAGGCCACCTGATCTTTCTGTCCCTGGGGCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CCA 90 bp | GGTCTGACCTGGGAAGGAGGCTCAACCTCACCCTCTATGGAGACTTGGGTCACAAGCCATTCTCCAAGGTaGCAATTCCACAGGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: GLTWEGGSTSPSMETWVTSHSPR*QFHRIF Trigger: GAAAATCCTGTGGAATTGCCACCTTGGAGAATGGCT...TGTGACCCAAGTCTCCATAGAGGGTGAGGTTGAGCCTCCTTCCCAGGTCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CCA 90 bp | CTGGCGTACTGGGGGTGCCTTCTCTGGGCTGTAGGCCCCAGGTCCTaGTGTCACCTCCAGACCTCTGACCTTGGCCCGGCCCTGCATGGA | + |
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Preference number: 5 (lower is better) Translates to: LAYWGCLLWAVGPRS*CHLQTSDLGPALHG Trigger: TCCATGCAGGGCCGGGCCAAGGTCAGAGGTCTGGAGGTGACACCAGGACCTGGGGCCTACAGCCCAGAGAAGGCACCCCCAGTACGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CAA 90 bp | GGGGTGAGAAGGGCAGAGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCTCCAGACCTCTGACCTaGGCCCGGCCCTGCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: GVRRAETAGPPPGEFSGLSRPLT*ARPCME Trigger: CTCCATGCAGGGCCGGGCCAAGGTCAGAGGTCTGGA...GAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCTCTGCCCTTCTCACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CCA 90 bp | TATGCCGGGGCCCGGGCCCGGTTAACAGTGACCTGTTCTGGGTTGTaGGTACCAGGACCAGGTGTGTCCTCCAGGGGCCGTGGTGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: YAGARARLTVTCSGL*VPGPGVSSRGRGVR Trigger: TCGGACACCACGGCCCCTGGAGGACACACCTGGTCCTGGTACCCACAACCCAGAACAGGTCACTGTTAACCGGGCCCGGGCCCCGGCATA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CCA 90 bp | GGTGTCTGGAGGCTTCTGTCGGAGGCGAGAGCCCAGAGTGAAAGCTaGGGCATTCCGCTGGCGTACTGGGGGTGCCTTCTCTGGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: GVWRLLSEARAQSES*GIPLAYWGCLLWAV Trigger: TACAGCCCAGAGAAGGCACCCCCAGTACGCCAGCGGAATGCCCCAGCTTTCACTCTGGGCTCTCGCCTCCGACAGAAGCCTCCAGACACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CAA 90 bp | AGACTGCAGGGCCACCTCCAGGAGAGTTCTCCGGCCTCATCTGCAGAAACCCAATGGTGGATGCCCGCTTaGAGTGACGGATGCCCATGG | + |
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Preference number: 5 (lower is better) Translates to: RLQGHLQESSPASSAETQWWMPA*SDGCPW Trigger: CCATGGGCATCCGTCACTCAAAGCGGGCATCCACCA...TTGGGTTTCTGCAGATGAGGCCGGAGAACTCTCCTGGAGGTGGCCCTGCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS GCA 90 bp | AGGTGCTTCACTGGGCCTCCGAGCGAGGGAGTAGGCAGGACTGGCTaGCTTGGTACAATCGTGATTGACATAGCCAACGGTGGACGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RCFTGPPSEGVGRTG*LGTIVIDIANGGRK Trigger: CTTCCGTCCACCGTTGGCTATGTCAATCACGATTGTACCAAGGCAGCCAGTCCTGCCTACTCCCTCGCTCGGAGGCCCAGTGAAGCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS-3UTR CAA 90 bp | CAGGGACAGAAAGATCAGGTGGCCTCAAAGGACCTCGGACTGAAGACGGGGAGGGTGACCTGTTCTGGGTaGTGGGTACCAGGACCAGGT | + |
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Preference number: 5 (lower is better) Translates to: QGQKDQVASKDLGLKTGRVTCSG*WVPGPG Trigger: ACCTGGTCCTGGTACCCACAACCCAGAACAGGTCAC...CCTCCCCGTCTTCAGTCCGAGGTCCTTTGAGGCCACCTGATCTTTCTGTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS TCA 90 bp | GAGCGAGGGAGTAGGCAGGACTGGCTGCCTTGGTACAATCGTGATTaGCATAGCCAACGGTGGACGGAAGAACATACAAGCCAGGTCCGG | + |
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Preference number: 5 (lower is better) Translates to: ERGSRQDWLPWYNRD*HSQRWTEEHTSQVR Trigger: CCGGACCTGGCTTGTATGTTCTTCCGTCCACCGTTGGCTATGTCAATCACGATTGTACCAAGGCAGCCAGTCCTGCCTACTCCCTCGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CCA 72 bp | GCCCGGGCCCGGTTAACAGTGACCTGTTCTGGGTTGTaGGTACCAGGACCAGGTGTGTCCTCCAGGGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: ARARLTVTCSGL*VPGPGVSSRGR Trigger: ACGGCCCCTGGAGGACACACCTGGTCCTGGTACCCACAACCCAGAACAGGTCACTGTTAACCGGGCCCGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS TCA 72 bp | GTCCGGACTCTCATACTGCCCAGGGCCTGGAATCTCTaGAGGATCCTGAGGGGGACGTGCAGGGGGTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: VRTLILPRAWNL*RILRGTCRGCA Trigger: CGCACACCCCCTGCACGTCCCCCTCAGGATCCTTCAGAGATTCCAGGCCCTGGGCAGTATGAGAGTCCGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS GCA 72 bp | TCTCTGAAGGATCCTGAGGGGGACGTGCAGGGGGTGTaGGGCCCACAACTGTGTAGCTGGGACTGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SLKDPEGDVQGV*GPQLCSWDCWV Trigger: AACCCAGCAGTCCCAGCTACACAGTTGTGGGCCGCACACCCCCTGCACGTCCCCCTCAGGATCCTTCAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CCA 72 bp | CATGGTGTAGGCATTGGGGGCAGGAACAGAGGTGTCTaGAGGCTTCTGTCGGAGGCGAGAGCCCAGAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: HGVGIGGRNRGV*RLLSEARAQSE Trigger: TTCACTCTGGGCTCTCGCCTCCGACAGAAGCCTCCAGACACCTCTGTTCCTGCCCCCAATGCCTACACCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CAA 72 bp | AGCATTTGGTGTCCCCTACCATGGTGGATGCCCGCTTaGAGTGACGGATGCCCATGGTATATGCCGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SIWCPLPWWMPA*SDGCPWYMPGP Trigger: GGGCCCCGGCATATACCATGGGCATCCGTCACTCAAAGCGGGCATCCACCATGGTAGGGGACACCAAATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS GCA 72 bp | ACTGGGCCTCCGAGCGAGGGAGTAGGCAGGACTGGCTaGCTTGGTACAATCGTGATTGACATAGCCAACGGT | + |
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Preference number: 6 (lower is better) Translates to: TGPPSEGVGRTG*LGTIVIDIANG Trigger: ACCGTTGGCTATGTCAATCACGATTGTACCAAGGCAGCCAGTCCTGCCTACTCCCTCGCTCGGAGGCCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS CCA 72 bp | GAACATACAAGCCAGGTCCGGAGCCATTCTCCAAGGTaGCAATTCCACAGGATTTTCTCAGCCCGGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: EHTSQVRSHSPR*QFHRIFSARSP Trigger: CGGAGACCGGGCTGAGAAAATCCTGTGGAATTGCCACCTTGGAGAATGGCTCCGGACCTGGCTTGTATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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| CDS TCA 72 bp | AGTAGGCAGGACTGGCTGCCTTGGTACAATCGTGATTaGCATAGCCAACGGTGGACGGAAGAACATACAAGC | + |
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Preference number: 6 (lower is better) Translates to: SRQDWLPWYNRD*HSQRWTEEHTS Trigger: GCTTGTATGTTCTTCCGTCCACCGTTGGCTATGTCAATCACGATTGTACCAAGGCAGCCAGTCCTGCCTACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095464.3 |
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