Pregenerated sensors for ODF3L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045620Ensembl transcript IDs: ENSMUST00000055036.7, ENSMUST00000215694.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTaGTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PLSRHQLCYQNPRSS*SMCSRKIACEAGGR Trigger: CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATACCGGCTGGATGTCGTaGGAGCCAGGGCCAGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNTGWMS*EPGPGR Trigger: TCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGT...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATAGATGCGCTCCTCCATaGGGACCTGGGGGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNRCAPP*GPGGRW Trigger: CCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCT...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGGGGTTTGTGCACAGTaGCCGGCTGGATGTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNGVCAQ*PAGCRG Trigger: CCCACGACATCCAGCCGGTCACTGTGCACAAACCCC...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGTTGGTCCCCAGAGTaGCTGGCAGCTGGTACTGGT | + |
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Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQCWSPE*LAAGTG Trigger: ACCAGTACCAGCTGCCAGTCACTCTGGGGACCAACA...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATCCTCCATGGGGACCTaGGGGCAGGTGGATATTCCA | + |
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Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQSSMGT*GQVDIP Trigger: TGGAATATCCACCTGCCCCCAGGTCCCCATGGAGGA...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGATGCGCTCCTCCATaGGGACCTGGGGGCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSSCSMCSRKIACEAGGRCAPP*GPGGRW Trigger: CCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCT...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATATAGCCAGTACAGGATaGCCGGAGGTACTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNIASTG*PEVLGR Trigger: CCTGCCAAGTACCTCCGGTCATCCTGTACTGGCTAT...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | CGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGGGGGTTTGTGCACAGTaGCCGGCTGGATGTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RSSCSMCSRKIACEAGGRGVCAQ*PAGCRG Trigger: CCCACGACATCCAGCCGGTCACTGTGCACAAACCCC...CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGCCAGGGCCAGGCCGATaGGTGTGGTCCAAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: PRSSCSMCSRKIACEAGGPGPGR*VWSKGQ Trigger: CTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGG...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAAGTACTTGGCAGGCCCTaGACCTTTGATTGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQVLGRP*TFDCGH Trigger: ATGGCCACAATCAAAGGTCCAGGGCCTGCCAAGTAC...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | CGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGTGCACAGTGACCGGCTaGATGTCGTGGGAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RSSCSMCSRKIACEAGGRCTVTG*MSWEPG Trigger: CCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCA...CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATTGGGCACAAGTGGGGTaGATGTTTGATGCCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNWAQVG*MFDAHG Trigger: ACCATGGGCATCAAACATTCACCCCACTTGTGCCCA...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCCCAGGGCCAGGCCGATaGGTGTGGTCCAAAGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SSCSMCSRKIACEAGGRSPGPGR*VWSKGQ Trigger: CTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGG...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATCTCTTCCTCCTTCTCTaGGTGCTGTGCGTAGAACAC | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNLFLLL*VLCVEH Trigger: GTGTTCTACGCACAGCACCCAGAGAAGGAGGAAGAG...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGTACTTGGCAGGCCCTaGACCTTTGATTGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNVLGRP*TFDCGH Trigger: ATGGCCACAATCAAAGGTCCAGGGCCTGCCAAGTAC...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGTTCTGGTAGACGGATaGCTCAGGTCGGGTATGCAT | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNVLVDG*LRSGMH Trigger: ATGCATACCCGACCTGAGCCATCCGTCTACCAGAAC...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGTGCACAGTGACCGGCTaGATGTCGTGGGAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMCTVTG*MSWEPG Trigger: CCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCA...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAAATCAGTGGGCACAAGTaGGGTGAATGTTTGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQISGHK*GECLMP Trigger: GGGCATCAAACATTCACCCCACTTGTGCCCACTGAT...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAACTTCTCTGGGTGCTGTaGGTAGAACACATAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQLLWVL*VEHIVP Trigger: AGGAACTATGTGTTCTACGCACAGCACCCAGAGAAG...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAAAATTTATGCGTGGATTaGAGATGCGCTCCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQNLCVD*RCAPPW Trigger: CCATGGAGGAGCGCATCTCCAATCCACGCATAAATT...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | CGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGGGTCCCCAGAGTGACTaGCAGCTGGTACTGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: RSSCSMCSRKIACEAGGRGPQSD*QLVLVR Trigger: CCTAACCAGTACCAGCTGCCAGTCACTCTGGGGACC...CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATATCAGTGGGCACAAGTaGGGTGAATGTTTGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNISGHK*GECLMP Trigger: GGGCATCAAACATTCACCCCACTTGTGCCCACTGAT...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGATAGCCAGTACAGGATaGCCGGAGGTACTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PRSSCSMCSRKIACEAGGIASTG*PEVLGR Trigger: CCTGCCAAGTACCTCCGGTCATCCTGTACTGGCTAT...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATATGCAGACTGTAAGCTaGCTCCTGGAACATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNMQTVS*LLEHGD Trigger: ATCTCCATGTTCCAGGAGCCAGCTTACAGTCTGCAT...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGTCCTCCATGGGGACCTaGGGGCAGGTGGATATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMSSMGT*GQVDIP Trigger: TGGAATATCCACCTGCCCCCAGGTCCCCATGGAGGA...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGGGTCCCCAGAGTGACTaGCAGCTGGTACTGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMGPQSD*QLVLVR Trigger: CCTAACCAGTACCAGCTGCCAGTCACTCTGGGGACC...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | CGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGTGGGCACAAGTGGGGTaGATGTTTGATGCCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: RSSCSMCSRKIACEAGGRWAQVG*MFDAHG Trigger: ACCATGGGCATCAAACATTCACCCCACTTGTGCCCA...CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGCTTGATTTCATGCCATaGGGGCACCTCTTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PRSSCSMCSRKIACEAGGLDFMP*GHLFLL Trigger: AAGGAGGAAGAGGTGCCCTCATGGCATGAAATCAAG...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCGTTCTGGTAGACGGATaGCTCAGGTCGGGTATGCAT | + |
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Preference number: 4 (lower is better) Translates to: SSCSMCSRKIACEAGGRSVLVDG*LRSGMH Trigger: ATGCATACCCGACCTGAGCCATCCGTCTACCAGAAC...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR TCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGCTTGATTTCATGCCATaGGGGCACCTCTTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMLDFMP*GHLFLL Trigger: AAGGAGGAAGAGGTGCCCTCATGGCATGAAATCAAG...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGGTCTGCTTGATTTCATaGCATGAGGGCACCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMVCLIS*HEGTSS Trigger: GGAAGAGGTGCCCTCATGGCATGAAATCAAGCAGAC...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGTGCAGGAGGCTGGCATaGAATTTATGCGTGGATTGG | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMCRRLA*NLCVDW Trigger: CCAATCCACGCATAAATTGCATGCCAGCCTCCTGCA...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAATTTATGCGTGGATTaGAGATGCGCTCCTCCATGG | + |
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Preference number: 4 (lower is better) Translates to: PRSSCSMCSRKIACEAGGNLCVD*RCAPPW Trigger: CCATGGAGGAGCGCATCTCCAATCCACGCATAAATT...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCAGAACACATAGTTCCTaGACCCCTTGGACTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SSCSMCSRKIACEAGGRSRTHSS*TPWTAS Trigger: TGAAGCAGTCCAAGGGGTCCAGGAACTATGTGTTCT...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGCTGGCTCCTGGAACATaGAGATGTCATGGGCTATAT | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMLAPGT*RCHGLY Trigger: ATATAGCCCATGACATCTCCATGTTCCAGGAGCCAG...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGATGCAGACTGTAAGCTaGCTCCTGGAACATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMMQTVS*LLEHGD Trigger: ATCTCCATGTTCCAGGAGCCAGCTTACAGTCTGCAT...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAACAAAACGAGTTACTTTaGGATTCAAGAAATAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GHSAGTSSATRIHGQVAQQNELL*DSRNSK Trigger: CTTGCTATTTCTTGAATCCCAAAGTAACTCGTTTTG...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGCTATATTCTCCTTGTaGAACCAATTCTTGTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ATQQAPALLPESTVKLLNAIFSL*NQFLFV Trigger: CACAAACAAGAATTGGTTCCACAAGGAGAATATAGC...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCGTTCCAGACACAGTGTaGGGAACAAGCAGGATGATA | + |
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Preference number: 4 (lower is better) Translates to: SSCSMCSRKIACEAGGRSVPDTV*GTSRMI Trigger: TATCATCCTGCTTGTTCCCCACACTGTGTCTGGAAC...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGATGATGACAGGGGTCTaGTTGATTTCATGCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMMMTGV*LISCHE Trigger: CTCATGGCATGAAATCAAGCAGACCCCTGTCATCAT...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGATGACAGGGGTCTaGTTGATTTCATGCCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SSCSMCSRKIACEAGGRSMMTGV*LISCHE Trigger: CTCATGGCATGAAATCAAGCAGACCCCTGTCATCAT...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | CGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGATCCATCACTCTATATaGACACCGGTAGCCAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: RSSCSMCSRKIACEAGGRIHHSI*TPVAKS Trigger: ACTTTTGGCTACCGGTGTCCATATAGAGTGATGGAT...CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGATCCATCACTCTATATaGACACCGGTAGCCAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PRSSCSMCSRKIACEAGGIHHSI*TPVAKS Trigger: ACTTTTGGCTACCGGTGTCCATATAGAGTGATGGAT...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CCA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGGCTATATTCTCCTTGTaGAACCAATTCTTGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCSMCSRKIACEAGGRSMAIFSL*NQFLFV Trigger: CACAAACAAGAATTGGTTCCACAAGGAGAATATAGC...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | AAGGCAGGTATGCGGGGTTTGTGCACAGTGACCGGCTGGATGTCGTaGGAGCCAGGGCCAGGCCGATGCGTGTGGTCCAAAGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAGMRGLCTVTGWMS*EPGPGRCVWSKGQP Trigger: TGGCTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | CCCATGGTGAAGGCAGGTATGCGGGGTTTGTGCACAGTGACCGGCTaGATGTCGTGGGAGCCAGGGCCAGGCCGATGCGTGTGGTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PMVKAGMRGLCTVTG*MSWEPGPGRCVWSK Trigger: TTTGGACCACACGCATCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTTCACCATGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 90 bp | TGCACAGTGACCGGCTGGATGTCGTGGGAGCCAGGGCCAGGCCGATaGGTGTGGTCCAAAGGACAGCCAAAGCGCTTGGCCATGCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CTVTGWMSWEPGPGR*VWSKGQPKRLAMLN Trigger: GTTTAGCATGGCCAAGCGCTTTGGCTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | GTGACCGGCTGGATGTCGTGGGAGCCAGGGCCAGGCCGATGCGTGTaGTCCAAAGGACAGCCAAAGCGCTTGGCCATGCTAAACAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTGWMSWEPGPGRCV*SKGQPKRLAMLNKG Trigger: CCCTTTGTTTAGCATGGCCAAGCGCTTTGGCTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 90 bp | GGTGAATGTTTGATGCCCATGGTGAAGGCAGGTATGCGGGGTTTGTaGACAGTGACCGGCTGGATGTCGTGGGAGCCAGGGCCAGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GECLMPMVKAGMRGL*TVTGWMSWEPGPGR Trigger: TCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTTCACCATGGGCATCAAACATTCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | GCGCTTGGCCATGCTAAACAAAGGGCTGCGGTTCTGGTAGACGGATaGCTCAGGTCGGGTATGCATAGCAGGTCCGGGACCTCCTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: ALGHAKQRAAVLVDG*LRSGMHSRSGTSCY Trigger: ATAGCAGGAGGTCCCGGACCTGCTATGCATACCCGACCTGAGCCATCCGTCTACCAGAACCGCAGCCCTTTGTTTAGCATGGCCAAGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGCAGGTATGCGGGGTTaGTGCACAGTGACCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATQQAPALLPESTVKLLNAGMRG*CTVTGW Trigger: CCAGCCGGTCACTGTGCACAAACCCCGCATACCTGC...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | CTTCTCAAGGTTGTACTTGCAGGAGGCTGGCATGCAATTTATGCGTaGATTGGAGATGCGCTCCTCCATGGGGACCTGGGGGCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKVVLAGGWHAIYA*IGDALLHGDLGAGG Trigger: TCCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGAGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAAGCAGGCCCTGGACCTTaGATTGTGGCCATGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: GHSAGTSSATRIHGQVAQAGPGP*IVAMMT Trigger: TGTCATCATGGCCACAATCAAAGGTCCAGGGCCTGC...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 90 bp | TTGGCAGGCCCTGGACCTTTGATTGTGGCCATGATGACAGGGGTCTaGTTGATTTCATGCCATGAGGGCACCTCTTCCTCCTTCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LAGPGPLIVAMMTGV*LISCHEGTSSSFSG Trigger: CCCAGAGAAGGAGGAAGAGGTGCCCTCATGGCATGAAATCAAGCAGACCCCTGTCATCATGGCCACAATCAAAGGTCCAGGGCCTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | CAAGGTTGTACTTGCAGGAGGCTGGCATGCAATTTATGCGTGGATTaGAGATGCGCTCCTCCATGGGGACCTGGGGGCAGGTGGATATTC | + |
|
Preference number: 5 (lower is better) Translates to: QGCTCRRLACNLCVD*RCAPPWGPGGRWIF Trigger: GAATATCCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | CAGCTGGTACTGGTTAGGAGCAGGGTTGGGATCCATCACTCTATATaGACACCGGTAGCCAAAAGTGTACTGGGGAGGCTGACGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLVLVRSRVGIHHSI*TPVAKSVLGRLTFP Trigger: GGGGAACGTCAGCCTCCCCAGTACACTTTTGGCTACCGGTGTCCATATAGAGTGATGGATCCCAACCCTGCTCCTAACCAGTACCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | GGCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAAATGACAGGGGTCTGCTaGATTTCATGCCATGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GHSAGTSSATRIHGQVAQMTGVC*ISCHEG Trigger: GCCCTCATGGCATGAAATCAAGCAGACCCCTGTCAT...TTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 90 bp | CAGAGGGTCGAGTCTTCTCAAGGTTGTACTTGCAGGAGGCTGGCATaGAATTTATGCGTGGATTGGAGATGCGCTCCTCCATGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: QRVESSQGCTCRRLA*NLCVDWRCAPPWGP Trigger: AGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGAGAAGACTCGACCCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 90 bp | GAGGCTGACGTTCCCCAGAGGGTCGAGTCTTCTCAAGGTTGTACTTaGAGGAGGCTGGCATGCAATTTATGCGTGGATTGGAGATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EADVPQRVESSQGCT*RRLACNLCVDWRCA Trigger: AGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGAGAAGACTCGACCCTCTGGGGAACGTCAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | TTCCCCAGAGGGTCGAGTCTTCTCAAGGTTGTACTTGCAGGAGGCTaGCATGCAATTTATGCGTGGATTGGAGATGCGCTCCTCCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPRGSSLLKVVLAGG*HAIYAWIGDALLHG Trigger: CCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGAGAAGACTCGACCCTCTGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | CGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGCGGAAGACAGGGATGTaGGTCCCCAGAGTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSCSMCSRKIACEAGGRRKTGM*VPRVTG Trigger: GCCAGTCACTCTGGGGACCAACATCCCTGTCTTCCG...CCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGGCAGGTATGCGGGGTTaGTGCACAGTGACCGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCSMCSRKIACEAGGRSMAGMRG*CTVTGW Trigger: CCAGCCGGTCACTGTGCACAAACCCCGCATACCTGC...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS TCA 90 bp | CTCCTGGAACATGGAGATGTCATGGGCTATATAGCCAGTACAGGATaGCCGGAGGTACTTGGCAGGCCCTGGACCTTTGATTGTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLEHGDVMGYIASTG*PEVLGRPWTFDCGH Trigger: ATGGCCACAATCAAAGGTCCAGGGCCTGCCAAGTACCTCCGGTCATCCTGTACTGGCTATATAGCCCATGACATCTCCATGTTCCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 90 bp | GACGGATGGCTCAGGTCGGGTATGCATAGCAGGTCCGGGACCTCCTaGTATATTCTCCTTGTGGAACCAATTCTTGTTTGTGGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DGWLRSGMHSRSGTS*YILLVEPILVCGSQ Trigger: CTGGCTTCCACAAACAAGAATTGGTTCCACAAGGAGAATATAGCAGGAGGTCCCGGACCTGCTATGCATACCCGACCTGAGCCATCCGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | AGGCTGGCATGCAATTTATGCGTGGATTGGAGATGCGCTCCTCCATaGGGACCTGGGGGCAGGTGGATATTCCAAAACGAGTTACTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLACNLCVDWRCAPP*GPGGRWIFQNELLW Trigger: CCAAAGTAACTCGTTTTGGAATATCCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGGATGACCGGAGGTACTaGGCAGGCCCTGGACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SCSMCSRKIACEAGGRSMDDRRY*AGPGPL Trigger: CAAAGGTCCAGGGCCTGCCAAGTACCTCCGGTCATC...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATTGGTTAGGAGCAGGGTaGGGATCCATCACTCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: ATQQAPALLPESTVKLLNWLGAG*GSITLY Trigger: ATATAGAGTGATGGATCCCAACCCTGCTCCTAACCA...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | GACTGCTTCATAGTGAAGGCTAATGGTAGTGTTCCAGACACAGTGTaGGGAACAAGCAGGATGATAAAGGGCTCACACTGGGGTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DCFIVKANGSVPDTV*GTSRMIKGSHWGPQ Trigger: CTGTGGACCCCAGTGTGAGCCCTTTATCATCCTGCTTGTTCCCCACACTGTGTCTGGAACACTACCATTAGCCTTCACTATGAAGCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGGCAGGCCCTGGACCTTaGATTGTGGCCATGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: SCSMCSRKIACEAGGRSMAGPGP*IVAMMT Trigger: TGTCATCATGGCCACAATCAAAGGTCCAGGGCCTGC...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | GCCACTCAGCAGGCACCAGCTCTGCTACCAGAATCCACGGTCAAGTTGCTCAATGGAACCAATTCTTGTTaGTGGAAGCCAGACTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: ATQQAPALLPESTVKLLNGTNSC*WKPDYR Trigger: CCTATAGTCTGGCTTCCACAAACAAGAATTGGTTCC...ATTGAGCAACTTGACCGTGGATTCTGGTAGCAGAGCTGGTGCCTGCTGAGTGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGACAGGGGTCTGCTaGATTTCATGCCATGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSMCSRKIACEAGGRSMTGVC*ISCHEG Trigger: GCCCTCATGGCATGAAATCAAGCAGACCCCTGTCAT...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCCAATTTATGCGTGGATaGGAGATGCGCTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSMCSRKIACEAGGRSQFMRG*EMRSSM Trigger: CATGGAGGAGCGCATCTCCAATCCACGCATAAATTG...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGCAATTTATGCGTGGATaGGAGATGCGCTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SCSMCSRKIACEAGGRSMQFMRG*EMRSSM Trigger: CATGGAGGAGCGCATCTCCAATCCACGCATAAATTG...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | CCACGGTCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGTGGTTAGGAGCAGGGTaGGGATCCATCACTCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: PRSSCSMCSRKIACEAGGWLGAG*GSITLY Trigger: ATATAGAGTGATGGATCCCAACCCTGCTCCTAACCA...CCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGACCGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCAAGTGGGGTGAATGTTaGATGCCCATGGTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSMCSRKIACEAGGRSKWGEC*MPMVKA Trigger: TGCCTTCACCATGGGCATCAAACATTCACCCCACTT...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 90 bp | GTCTATGATCCGTTTCTTAGTGTGCCGTGTATGCAGACTGTAAGCTaGCTCCTGGAACATGGAGATGTCATGGGCTATATAGCCAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: VYDPFLSVPCMQTVS*LLEHGDVMGYIAST Trigger: TGTACTGGCTATATAGCCCATGACATCTCCATGTTCCAGGAGCCAGCTTACAGTCTGCATACACGGCACACTAAGAAACGGATCATAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCGGAACCAATTCTTGTTaGTGGAAGCCAGACTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSMCSRKIACEAGGRSGTNSC*WKPDYR Trigger: CCTATAGTCTGGCTTCCACAAACAAGAATTGGTTCC...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | AGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCATGTTGTGGAACCAATTCTaGTTTGTGGAAGCCAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SCSMCSRKIACEAGGRSMLWNQF*FVEARL Trigger: TAGTCTGGCTTCCACAAACAAGAATTGGTTCCACAA...CATGCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTTGCTCAATGTGTTCTAGGAAAATAGCATGTGAGGCAGGAGGGAGGAGCTTGTGGAACCAATTCTaGTTTGTGGAAGCCAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: SSCSMCSRKIACEAGGRSLWNQF*FVEARL Trigger: TAGTCTGGCTTCCACAAACAAGAATTGGTTCCACAA...GCTCCTCCCTCCTGCCTCACATGCTATTTTCCTAGAACACATTGAGCAACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 72 bp | ACCGGCTGGATGTCGTGGGAGCCAGGGCCAGGCCGATaGGTGTGGTCCAAAGGACAGCCAAAGCGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGWMSWEPGPGR*VWSKGQPKRLA Trigger: GGCCAAGCGCTTTGGCTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | AAGGCAGGTATGCGGGGTTTGTGCACAGTGACCGGCTaGATGTCGTGGGAGCCAGGGCCAGGCCGATGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: KAGMRGLCTVTG*MSWEPGPGRCV Trigger: CACGCATCGGCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | TGGATGTCGTGGGAGCCAGGGCCAGGCCGATGCGTGTaGTCCAAAGGACAGCCAAAGCGCTTGGCCATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: WMSWEPGPGRCV*SKGQPKRLAML Trigger: TAGCATGGCCAAGCGCTTTGGCTGTCCTTTGGACCACACGCATCGGCCTGGCCCTGGCTCCCACGACATCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 90 bp | TGGGGTGAATGTTTGATGCCCATGGTGAAGGCAGGTATGCGGGGTTaGTGCACAGTGACCGGCTGGATGTCGTGGGAGCCAGGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WGECLMPMVKAGMRG*CTVTGWMSWEPGPG Trigger: GCCTGGCCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTTCACCATGGGCATCAAACATTCACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 72 bp | TTGATGCCCATGGTGAAGGCAGGTATGCGGGGTTTGTaGACAGTGACCGGCTGGATGTCGTGGGAGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LMPMVKAGMRGL*TVTGWMSWEPG Trigger: CCCTGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTTCACCATGGGCATCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | CATGCTAAACAAAGGGCTGCGGTTCTGGTAGACGGATaGCTCAGGTCGGGTATGCATAGCAGGTCCGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: HAKQRAAVLVDG*LRSGMHSRSGT Trigger: GGTCCCGGACCTGCTATGCATACCCGACCTGAGCCATCCGTCTACCAGAACCGCAGCCCTTTGTTTAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 72 bp | TACTTGCAGGAGGCTGGCATGCAATTTATGCGTGGATaGGAGATGCGCTCCTCCATGGGGACCTGGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YLQEAGMQFMRG*EMRSSMGTWGQ Trigger: CTGCCCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 72 bp | TGTTTGATGCCCATGGTGAAGGCAGGTATGCGGGGTTaGTGCACAGTGACCGGCTGGATGTCGTGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CLMPMVKAGMRG*CTVTGWMSWEP Trigger: TGGCTCCCACGACATCCAGCCGGTCACTGTGCACAAACCCCGCATACCTGCCTTCACCATGGGCATCAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 90 bp | GCAGGCCCTGGACCTTTGATTGTGGCCATGATGACAGGGGTCTGCTaGATTTCATGCCATGAGGGCACCTCTTCCTCCTTCTCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: AGPGPLIVAMMTGVC*ISCHEGTSSSFSGC Trigger: GCACCCAGAGAAGGAGGAAGAGGTGCCCTCATGGCATGAAATCAAGCAGACCCCTGTCATCATGGCCACAATCAAAGGTCCAGGGCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | GTTGTACTTGCAGGAGGCTGGCATGCAATTTATGCGTaGATTGGAGATGCGCTCCTCCATGGGGACCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: VVLAGGWHAIYA*IGDALLHGDLG Trigger: CCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | AAGACAGGGATGTTGGTCCCCAGAGTGACTGGCAGCTaGTACTGGTTAGGAGCAGGGTTGGGATCCATCACT | + |
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Preference number: 6 (lower is better) Translates to: KTGMLVPRVTGS*YWLGAGLGSIT Trigger: AGTGATGGATCCCAACCCTGCTCCTAACCAGTACCAGCTGCCAGTCACTCTGGGGACCAACATCCCTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 90 bp | TCAAGGTTGTACTTGCAGGAGGCTGGCATGCAATTTATGCGTGGATaGGAGATGCGCTCCTCCATGGGGACCTGGGGGCAGGTGGATATT | + |
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Preference number: 6 (lower is better) Translates to: SRLYLQEAGMQFMRG*EMRSSMGTWGQVDI Trigger: AATATCCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 72 bp | ATTGTGGCCATGATGACAGGGGTCTGCTTGATTTCATaGCATGAGGGCACCTCTTCCTCCTTCTCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: IVAMMTGVCLIS*HEGTSSSFSGC Trigger: GCACCCAGAGAAGGAGGAAGAGGTGCCCTCATGGCATGAAATCAAGCAGACCCCTGTCATCATGGCCACAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | TGCAATTTATGCGTGGATTGGAGATGCGCTCCTCCATaGGGACCTGGGGGCAGGTGGATATTCCAAAACGAG | + |
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Preference number: 6 (lower is better) Translates to: CNLCVDWRCAPP*GPGGRWIFQNE Trigger: CTCGTTTTGGAATATCCACCTGCCCCCAGGTCCCCATGGAGGAGCGCATCTCCAATCCACGCATAAATTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS TCA 72 bp | CATGGAGATGTCATGGGCTATATAGCCAGTACAGGATaGCCGGAGGTACTTGGCAGGCCCTGGACCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: HGDVMGYIASTG*PEVLGRPWTFD Trigger: ATCAAAGGTCCAGGGCCTGCCAAGTACCTCCGGTCATCCTGTACTGGCTATATAGCCCATGACATCTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 72 bp | GTTCCCCAGAGGGTCGAGTCTTCTCAAGGTTGTACTTaGAGGAGGCTGGCATGCAATTTATGCGTGGATTGG | + |
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Preference number: 6 (lower is better) Translates to: VPQRVESSQGCT*RRLACNLCVDW Trigger: CCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGAGAAGACTCGACCCTCTGGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 72 bp | GGACCTTTGATTGTGGCCATGATGACAGGGGTCTGCTaGATTTCATGCCATGAGGGCACCTCTTCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GPLIVAMMTGVC*ISCHEGTSSSF Trigger: GAAGGAGGAAGAGGTGCCCTCATGGCATGAAATCAAGCAGACCCCTGTCATCATGGCCACAATCAAAGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 72 bp | ATGTCCACAATCAGTGGGCACAAGTGGGGTGAATGTTaGATGCCCATGGTGAAGGCAGGTATGCGGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: MSTISGHKWGEC*MPMVKAGMRGL Trigger: CAAACCCCGCATACCTGCCTTCACCATGGGCATCAAACATTCACCCCACTTGTGCCCACTGATTGTGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CAA 90 bp | CAGTCACAAATGTCCACAATCAGTGGGCACAAGTGGGGTGAATGTTaGATGCCCATGGTGAAGGCAGGTATGCGGGGTTTGTGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: QSQMSTISGHKWGEC*MPMVKAGMRGLCTV Trigger: CACTGTGCACAAACCCCGCATACCTGCCTTCACCATGGGCATCAAACATTCACCCCACTTGTGCCCACTGATTGTGGACATTTGTGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS TCA 72 bp | GTCACAAATGTCCACAATCAGTGGGCACAAGTGGGGTaGATGTTTGATGCCCATGGTGAAGGCAGGTATGCG | + |
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Preference number: 6 (lower is better) Translates to: VTNVHNQWAQVG*MFDAHGEGRYA Trigger: CGCATACCTGCCTTCACCATGGGCATCAAACATTCACCCCACTTGTGCCCACTGATTGTGGACATTTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS GCA 72 bp | GAGTCTTCTCAAGGTTGTACTTGCAGGAGGCTGGCATaGAATTTATGCGTGGATTGGAGATGCGCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ESSQGCTCRRLA*NLCVDWRCAPP Trigger: TGGAGGAGCGCATCTCCAATCCACGCATAAATTGCATGCCAGCCTCCTGCAAGTACAACCTTGAGAAGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | GCCGTGTATGCAGACTGTAAGCTGGCTCCTGGAACATaGAGATGTCATGGGCTATATAGCCAGTACAGGATG | + |
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Preference number: 6 (lower is better) Translates to: AVYADCKLAPGT*RCHGLYSQYRM Trigger: CATCCTGTACTGGCTATATAGCCCATGACATCTCCATGTTCCAGGAGCCAGCTTACAGTCTGCATACACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | CCGTTTCTTAGTGTGCCGTGTATGCAGACTGTAAGCTaGCTCCTGGAACATGGAGATGTCATGGGCTATATA | + |
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Preference number: 6 (lower is better) Translates to: PFLSVPCMQTVS*LLEHGDVMGYI Trigger: TATATAGCCCATGACATCTCCATGTTCCAGGAGCCAGCTTACAGTCTGCATACACGGCACACTAAGAAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055036.7 ENSMUST00000215694.2 |
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| CDS CCA 72 bp | ATAGTGAAGGCTAATGGTAGTGTTCCAGACACAGTGTaGGGAACAAGCAGGATGATAAAGGGCTCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: IVKANGSVPDTV*GTSRMIKGSHW Trigger: CCAGTGTGAGCCCTTTATCATCCTGCTTGTTCCCCACACTGTGTCTGGAACACTACCATTAGCCTTCACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215694.2 |
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