Pregenerated sensors for ODF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025482Ensembl transcript IDs: ENSMUST00000026555.12, ENSMUST00000106049.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTaGCTTGTCCAATCCATGGCCAGCCCAGCACATTTCTGTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: ACSVVQGQAVSGPHW*LVQSMASPAHFCGR Trigger: CCTCCCACAGAAATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| 3UTR CAA 90 bp | ACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATaGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TSVLCGAGPGCQRTP*VTCPIHGQPSTFLW Trigger: CCACAGAAATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCCCAGCACATTTCTGTaGGAGGATCGTAGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: GAGPGCQRTPLVTCPIHGPSTFL*EDRSHR Trigger: TCTGTGACTACGATCCTCCCACAGAAATGTGCTGGG...GCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCCAGCACATTTCTGTaGGAGGATCGTAGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: WCRARLSADPIGDLSNPWPSTFL*EDRSHR Trigger: TCTGTGACTACGATCCTCCCACAGAAATGTGCTGGG...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| 3UTR TCA 72 bp | GTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTaGCTTGTCCAATCCATGGCCAGCCCAGCACATTTC | + |
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Preference number: 3 (lower is better) Translates to: VVQGQAVSGPHW*LVQSMASPAHF Trigger: GAAATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR TCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCTGCTGTAGAGGGCCATaGTGGGCCCCCGGGGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSCCRGP*WAPGGD Trigger: ATCGCCCCCGGGGGCCCATCATGGCCCTCTACAGCA...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR TCA 90 bp | CCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCTGCTGTAGAGGGCCATaGTGGGCCCCCGGGGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: PGCQRTPLVTCPIHGQPSCCRGP*WAPGGD Trigger: ATCGCCCCCGGGGGCCCATCATGGCCCTCTACAGCA...GCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | ACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCAACCTTGCCCACCGTGTaGGGCCCCATCACCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: TVQTSVLCGAGPGCQRTPTLPTV*GPITTG Trigger: GCCTGTGGTGATGGGGCCCCACACGGTGGGCAAGGT...TGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR TCA 90 bp | ACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCAACTTGCTGCGGCCCTTaGTGGAGAAGGAGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVQTSVLCGAGPGCQRTPTCCGP*WRRRAG Trigger: CCCAGCCCTCCTTCTCCATCAAGGGCCGCAGCAAGT...TGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCGGTAGCGCCCCAGGATaGAGTAGGCAGGGCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSGSAPG*SRQGQG Trigger: ACCTTGGCCCTGCCTACTCCATCCTGGGGCGCTACC...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTCTCCGCCAAGAGCATaGGAGCCCCACGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKLACSVVQGQAVSGPHSPPRA*EPHGSC Trigger: ACAGCTTCCGTGGGGCTCCCATGCTCTTGGCGGAGA...ATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | ACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTGGTAGCGCCCCAGGATaGAGTAGGCAGGGCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TSVLCGAGPGCQRTPLVTGSAPG*SRQGQG Trigger: ACCTTGGCCCTGCCTACTCCATCCTGGGGCGCTACC...AGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGACCTTGCCCACCGTGTaGGGCCCCATCACCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: WCRARLSADPIGDLSNPWTLPTV*GPITTG Trigger: GCCTGTGGTGATGGGGCCCCACACGGTGGGCAAGGT...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | ACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCAATGGAGAAGGAGGGCTaGGAGACCTTGCCCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: TVQTSVLCGAGPGCQRTPMEKEG*ETLPTV Trigger: CACGGTGGGCAAGGTCTCCCAGCCCTCCTTCTCCAT...TGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | AAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCGATGGGGCCTCCAGGTaGCCATCCATACCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KPSKLACSVVQGQAVSGPDGASR*PSIPPL Trigger: CAGAGGAGGTATGGATGGGCACCTGGAGGCCCCATC...GGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | ACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTCAGCAGGGCCTGGAGTaGTGTCCACTCGGAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLCGAGPGCQRTPLVTQQGLE*CPLGRS Trigger: AGACCTTCCGAGTGGACAGCACTCCAGGCCCTGCTG...AGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | CCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATGGATGCCCTCCCTGTTaGATCTCATTCCTGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PSKLACSVVQGQAVSGPHGCPPC*ISFLAL Trigger: GAGGGCCAGGAATGAGATGCAACAGGGAGGGCATCC...ATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCGGGTCAGCAAGGTCTTaGTATGGTAGCGCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSGSARS*YGSAPG Trigger: TCCTGGGGCGCTACCATACCAAGACCTTGCTGACCC...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCGTATGCCGCAGGACCTaGAGTCTTGTGCAGGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSVCRRT*SLVQVV Trigger: GACGACCTGCACAAGACTCCAGGTCCTGCGGCATAC...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCAGGGTGACCAGGTGCTaGGATGCCCTCCCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSKLACSVVQGQAVSGPRVTRC*DALPVA Trigger: TGCAACAGGGAGGGCATCCCAGCACCTGGTCACCCT...GGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| 3UTR CAA 72 bp | CTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATaGGTGACTTGTCCAATCCATGGCCAGCCCAGCACA | + |
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Preference number: 4 (lower is better) Translates to: LCGAGPGCQRTP*VTCPIHGQPST Trigger: TGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACTGTGCAGGTCGTCGCTaGAGCTGCCCAACTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RLSADPIGDLSNPWPAQHCAGRR*SCPTCC Trigger: GCAGCAAGTTGGGCAGCTTCAGCGACGACCTGCACA...GTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGGATGGGGCCTCCAGGTaGCCATCCATACCTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WCRARLSADPIGDLSNPWDGASR*PSIPPL Trigger: CAGAGGAGGTATGGATGGGCACCTGGAGGCCCCATC...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | AGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCGAAGCTGTAGGCCGGTaGTCGGAGTTTGGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: RARLSADPIGDLSNPWPAEAVGR*SEFGGC Trigger: ACACCCACCAAACTCCGAGCACCGGCCTACAGCTTC...GGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCCAGGGCCAAGGTCCTTaGCAGTCTTCAGGATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSQGQGP*QSSGSW Trigger: CCAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTG...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACCAGCAGGGCCTGGAGTaGTGTCCACTCGGAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RLSADPIGDLSNPWPAQHQQGLE*CPLGRS Trigger: AGACCTTCCGAGTGGACAGCACTCCAGGCCCTGCTG...GTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | AGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCGACCAGGTGCTGGGATaGCCTCCCTGTTGCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: RARLSADPIGDLSNPWPADQVLG*PPCCIS Trigger: TGAGATGCAACAGGGAGGGCATCCCAGCACCTGGTC...GGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAAAGCCCGTGGTGGGTaGAATCAGGTACTTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSKARGG*NQVLGS Trigger: GGACCCAAGTACCTGATTCCACCCACCACGGGCTTT...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGATGGAGAAGGAGGGCTaGGAGACCTTGCCCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: WCRARLSADPIGDLSNPWMEKEG*ETLPTV Trigger: CACGGTGGGCAAGGTCTCCCAGCCCTCCTTCTCCAT...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAGTATGCCGCAGGACCTaGAGTCTTGTGCAGGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPVCRRT*SLVQVV Trigger: GACGACCTGCACAAGACTCCAGGTCCTGCGGCATAC...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCAGGGCTGTGGGCTCCTaGTCCTGGCTTCAGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RARLSADPIGDLSNPWPARAVGS*SWLQGF Trigger: AAAACCCTGAAGCCAGGACCAGGAGCCCACAGCCCT...GGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAAGGGCTGTGGGCTCCTaGTCCTGGCTTCAGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPRAVGS*SWLQGF Trigger: AAAACCCTGAAGCCAGGACCAGGAGCCCACAGCCCT...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCATACCTCCTCTGCCATaGCTGGCTCTGTCCATGGAC | + |
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Preference number: 4 (lower is better) Translates to: RALWCRARLSADPIGDLSIPPLP*LALSMD Trigger: GTCCATGGACAGAGCCAGCCATGGCAGAGGAGGTAT...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS-3UTR TCA 90 bp | TTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCCCATGGACAAGAGGGTaGCCAGGTGCTGGGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSKPSKLACSVVQGQAVSPWTRG*PGAGMP Trigger: GGGCATCCCAGCACCTGGTCACCCTCTTGTCCATGG...GCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCCAGGGCCAAGGTCCTTaGCAGTCTTCAGGATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PGCQRTPLVTCPIHGQPSQGQGP*QSSGSW Trigger: CCAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTG...GCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCACCGGTGCTCGGAGTTTaGTGGGTGTGTGCTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPPVLGV*WVCASQ Trigger: TTGTGAAGCACACACCCACCAAACTCCGAGCACCGG...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATCAGTCTTCAGGATCTTaGGGTTCACACTGTAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PSKLACSVVQGQAVSGPHQSSGS*GSHCSG Trigger: CCCGCTACAGTGTGAACCCCAAGATCCTGAAGACTG...ATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | ACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCACGGGCAGAAATGGAATaGCTGGGTGCTGAGTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: TVQTSVLCGAGPGCQRTPRAEME*LGAESN Trigger: GTTTGACTCAGCACCCAGCCATTCCATTTCTGCCCG...TGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGGTGGGCTCCTGGTCCTaGCTTCAGGGTTTTATCCCC | + |
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Preference number: 4 (lower is better) Translates to: WCRARLSADPIGDLSNPWVGSWS*LQGFIP Trigger: GGGGATAAAACCCTGAAGCCAGGACCAGGAGCCCAC...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR TCA 90 bp | CTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTTGTGCAGGTCGTCGCTaGAGCTGCCCAACTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSADPIGDLSNPWPAQHICAGRR*SCPTCC Trigger: GCAGCAAGTTGGGCAGCTTCAGCGACGACCTGCACA...AATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR GCA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAAGTTTGGTGGGTGTGTaGTTCACAAAGCCCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPSLVGV*FTKPVV Trigger: CACCACGGGCTTTGTGAAGCACACACCCACCAAACT...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | ACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTGTGGAATCAGGTACTTaGGTCCAGGGCTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TSVLCGAGPGCQRTPLVTVESGT*VQGCCR Trigger: TCTACAGCAGCCCTGGACCCAAGTACCTGATTCCAC...AGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCGTGGAATCAGGTACTTaGGTCCAGGGCTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KPSKLACSVVQGQAVSGPVESGT*VQGCCR Trigger: TCTACAGCAGCCCTGGACCCAAGTACCTGATTCCAC...GGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGAAAGCCCGTGGTGGGTaGAATCAGGTACTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WCRARLSADPIGDLSNPWKARGG*NQVLGS Trigger: GGACCCAAGTACCTGATTCCACCCACCACGGGCTTT...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACCCGGTGCTCGGAGTTTaGTGGGTGTGTGCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLSADPIGDLSNPWPAQHPVLGV*WVCASQ Trigger: TTGTGAAGCACACACCCACCAAACTCCGAGCACCGG...GTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTTCTCCGCCAAGAGCATaGGAGCCCCACGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSADPIGDLSNPWPAQHISPPRA*EPHGSC Trigger: ACAGCTTCCGTGGGGCTCCCATGCTCTTGGCGGAGA...AATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCCAGTCTTCAGGATCTTaGGGTTCACACTGTAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGCQRTPLVTCPIHGQPSQSSGS*GSHCSG Trigger: CCCGCTACAGTGTGAACCCCAAGATCCTGAAGACTG...GCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR TCA 90 bp | AAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCGGAATGGCTGGGTGCTaGGTCAAACACATACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPSKLACSVVQGQAVSGPGMAGC*VKHILG Trigger: ACCAAGTATGTGTTTGACTCAGCACCCAGCCATTCC...GGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACCGGGCAGAAATGGAATaGCTGGGTGCTGAGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLSADPIGDLSNPWPAQHRAEME*LGAESN Trigger: GTTTGACTCAGCACCCAGCCATTCCATTTCTGCCCG...GTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAAGCCATGGTGTACTGTaGAGCCTTGAACTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPSHGVL*SLELGH Trigger: GTGACCAAGTTCAAGGCTCCACAGTACACCATGGCT...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTGTGGGCTCCTGGTCCTaGCTTCAGGGTTTTATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSADPIGDLSNPWPAQHIVGSWS*LQGFIP Trigger: GGGGATAAAACCCTGAAGCCAGGACCAGGAGCCCAC...AATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR TCA 90 bp | GGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCTGTACTGTGGAGCCTTaGACTTGGTCACTTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGPGCQRTPLVTCPIHGCTVEP*TWSLEP Trigger: AGGTTCAAGTGACCAAGTTCAAGGCTCCACAGTACA...GCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR GCA 90 bp | AACTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAAGAGGGTGACCAGGTaGTGGGATGCCCTCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLSKPSKLACSVVQGQAVKRVTR*WDALPV Trigger: AACAGGGAGGGCATCCCAGCACCTGGTCACCCTCTT...GACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTCATCCATACCTCCTCTaGCATGGCTGGCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSADPIGDLSNPWPAQHIHPYLL*HGWLCP Trigger: TGGACAGAGCCAGCCATGGCAGAGGAGGTATGGATG...AATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCTTGGTAGATTTCTCTaGAAAGTAATCACCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGPGCQRTPLVTCPIHGLGRFL*KVITRA Trigger: GGCCCGGGTGATTACTTTCCAGAGAAATCTACCAAG...GCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCCTTGGTAGATTTCTCTaGAAAGTAATCACCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGCQRTPLVTCPIHGQPSLGRFL*KVITRA Trigger: GGCCCGGGTGATTACTTTCCAGAGAAATCTACCAAG...GCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACTGTACTGTGGAGCCTTaGACTTGGTCACTTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSADPIGDLSNPWPAQHCTVEP*TWSLEP Trigger: AGGTTCAAGTGACCAAGTTCAAGGCTCCACAGTACA...GTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCAGTTTGGTGGGTGTGTaGTTCACAAAGCCCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKPSKLACSVVQGQAVSSLVGV*FTKPVV Trigger: CACCACGGGCTTTGTGAAGCACACACCCACCAAACT...GCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTTCACAAAGCCCGTGGTaGGTGGAATCAGGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSADPIGDLSNPWPAQHISQSPW*VESGTW Trigger: CCAAGTACCTGATTCCACCCACCACGGGCTTTGTGA...AATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | TTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGTGCTCGGAGTTTGGTaGGTGTGTGCTTCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSKPSKLACSVVQGQAVSVLGVW*VCASQS Trigger: GCTTTGTGAAGCACACACCCACCAAACTCCGAGCAC...GCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | GGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCCAGAAATGGAATGGCTaGGTGCTGAGTCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGPGCQRTPLVTCPIHGQKWNG*VLSQTH Trigger: ATGTGTTTGACTCAGCACCCAGCCATTCCATTTCTG...GCCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGAATGGCTGGGTGCTaGGTCAAACACATACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSKPSKLACSVVQGQAVSGMAGC*VKHILG Trigger: ACCAAGTATGTGTTTGACTCAGCACCCAGCCATTCC...GCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AACTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCGTGCTCGGAGTTTGGTaGGTGTGTGCTTCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLSKPSKLACSVVQGQAVVLGVW*VCASQS Trigger: GCTTTGTGAAGCACACACCCACCAAACTCCGAGCAC...GACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CCA 90 bp | CTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGAGCCATGGTGTACTGTaGAGCCTTGAACTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVKTVQTSVLCGAGPGCQSHGVL*SLELGH Trigger: GTGACCAAGTTCAAGGCTCCACAGTACACCATGGCT...CTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | CCATTGGTGACTTGTCCAATCCATGGCCAGCCCAGCACATTTCTGTGGGAGGATCTCCTCTGCCATGGCTaGCTCTGTCCATGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLVTCPIHGQPSTFLWEDLLCHG*LCPWTR Trigger: TCTTGTCCATGGACAGAGCCAGCCATGGCAGAGGAG...ATCCTCCCACAGAAATGTGCTGGGCTGGCCATGGATTGGACAAGTCACCAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AAAAATAACTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGGGTCAGCAAGGTCTTaGTATGGTAGCGCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNNLSKPSKLACSVVQGQGSARS*YGSAPG Trigger: TCCTGGGGCGCTACCATACCAAGACCTTGCTGACCC...CTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAGTTATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CCA 90 bp | AACTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCCAGAAATGGAATGGCTaGGTGCTGAGTCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: NLSKPSKLACSVVQGQAVQKWNG*VLSQTH Trigger: ATGTGTTTGACTCAGCACCCAGCCATTCCATTTCTG...GACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 90 bp | CCGGGCCGGGGGTCAGCAAGGTCTTGGTATGGTAGCGCCCCAGGATaGAGTAGGCAGGGCCAAGGTCCTTGCCAGTCTTCAGGATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PGRGSARSWYGSAPG*SRQGQGPCQSSGSW Trigger: CCAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTGCCTACTCCATCCTGGGGCGCTACCATACCAAGACCTTGCTGACCCCCGGCCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS TCA 90 bp | CCCCTGGGGGCTCCACCCGGGCAGCCATGGTGTACTGTGGAGCCTTaGACTTGGTCACTTGAACCTCAGTCTGACGGTATGCCGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLGAPPGQPWCTVEP*TWSLEPQSDGMPQD Trigger: GTCCTGCGGCATACCGTCAGACTGAGGTTCAAGTGACCAAGTTCAAGGCTCCACAGTACACCATGGCTGCCCGGGTGGAGCCCCCAGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CAA 90 bp | CGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCGCAGGGCCAAGGTCCTaGCCAGTCTTCAGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RALWCRARLSADPIGDLSAGPRS*PVFRIL Trigger: CAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTGC...GGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CAA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAAACTTGCTGCGGCCCTaGATGGAGAAGGAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPNLLRP*MEKEGW Trigger: CCAGCCCTCCTTCTCCATCAAGGGCCGCAGCAAGTT...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CAA 90 bp | AAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCGGGATGCCCTCCCTGTaGCATCTCATTCCTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPSKLACSVVQGQAVSGPGMPSL*HLIPGP Trigger: AGGGCCAGGAATGAGATGCAACAGGGAGGGCATCCC...GGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS CCA 90 bp | GCATGGGAGCCCCACGGAAGCTGTAGGCCGGTGCTCGGAGTTTGGTaGGTGTGTGCTTCACAAAGCCCGTGGTGGGTGGAATCAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: AWEPHGSCRPVLGVW*VCASQSPWWVESGT Trigger: AGTACCTGATTCCACCCACCACGGGCTTTGTGAAGCACACACCCACCAAACTCCGAGCACCGGCCTACAGCTTCCGTGGGGCTCCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 90 bp | AGAGCATGGGAGCCCCACGGAAGCTGTAGGCCGGTGCTCGGAGTTTaGTGGGTGTGTGCTTCACAAAGCCCGTGGTGGGTGGAATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RAWEPHGSCRPVLGV*WVCASQSPWWVESG Trigger: ACCTGATTCCACCCACCACGGGCTTTGTGAAGCACACACCCACCAAACTCCGAGCACCGGCCTACAGCTTCCGTGGGGCTCCCATGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 90 bp | GGATGGAGTAGGCAGGGCCAAGGTCCTTGCCAGTCTTCAGGATCTTaGGGTTCACACTGTAGCGGGGCCCTGGGGAGCAATTCTCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GWSRQGQGPCQSSGS*GSHCSGALGSNSPP Trigger: TGGCGGAGAATTGCTCCCCAGGGCCCCGCTACAGTGTGAACCCCAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTGCCTACTCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CAA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAGCAGGGCCAAGGTCCTaGCCAGTCTTCAGGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPAGPRS*PVFRIL Trigger: CAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTGC...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS-3UTR CAA 90 bp | TGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCAATCCATGGCTGAAGCTGCCCAACTaGCTGCGGCCCTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WCRARLSADPIGDLSNPWLKLPN*LRPLME Trigger: CTCCATCAAGGGCCGCAGCAAGTTGGGCAGCTTCAG...CCATGGATTGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS TCA 90 bp | CCATACCTCCTCTGCCATGGCTGGCTCTGTCCATGGACAAGAGGGTaGCCAGGTGCTGGGATGCCCTCCCTGTTGCATCTCATTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PYLLCHGWLCPWTRG*PGAGMPSLLHLIPG Trigger: GCCAGGAATGAGATGCAACAGGGAGGGCATCCCAGCACCTGGTCACCCTCTTGTCCATGGACAGAGCCAGCCATGGCAGAGGAGGTATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS CCA 90 bp | ATTTCTCTGGAAAGTAATCACCCGGGCCGGGGGTCAGCAAGGTCTTaGTATGGTAGCGCCCCAGGATGGAGTAGGCAGGGCCAAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISLESNHPGRGSARS*YGSAPGWSRQGQGP Trigger: AGGACCTTGGCCCTGCCTACTCCATCCTGGGGCGCTACCATACCAAGACCTTGCTGACCCCCGGCCCGGGTGATTACTTTCCAGAGAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGGCCGGTGCTCGGAGTTaGGTGGGTGTGTGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LVKTVQTSVLCGAGPGCQAGARS*VGVCFT Trigger: TGTGAAGCACACACCCACCAAACTCCGAGCACCGGC...CTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CAA 90 bp | AACTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCGCCGGTGCTCGGAGTTaGGTGGGTGTGTGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NLSKPSKLACSVVQGQAVAGARS*VGVCFT Trigger: TGTGAAGCACACACCCACCAAACTCCGAGCACCGGC...GACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CAA 90 bp | AACTTGTCAAAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCCTGAAGCTGCCCAACTaGCTGCGGCCCTTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NLSKPSKLACSVVQGQAVLKLPN*LRPLME Trigger: CTCCATCAAGGGCCGCAGCAAGTTGGGCAGCTTCAG...GACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTTTGACAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CAA 90 bp | AAACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCTTGAACTTGGTCACTaGAACCTCAGTCTGACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KPSKLACSVVQGQAVSGPLELGH*NLSLTV Trigger: TACCGTCAGACTGAGGTTCAAGTGACCAAGTTCAAG...GGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCATTGGTGACTTGTCCACTTGAACTTGGTCACTaGAACCTCAGTCTGACGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLCGAGPGCQRTPLVTCPLELGH*NLSLTV Trigger: TACCGTCAGACTGAGGTTCAAGTGACCAAGTTCAAG...TGGACAAGTCACCAATGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS-3UTR CAA 90 bp | ACCGTCCAAACTAGCGTGCTCTGTGGTGCAGGGCCAGGCTGTCAGCGGACCCCAGAGTCAAACACATACTaGGTAGATTTCTCTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVQTSVLCGAGPGCQRTPESNTY*VDFSGK Trigger: CTTTCCAGAGAAATCTACCAAGTATGTGTTTGACTC...TGGGGTCCGCTGACAGCCTGGCCCTGCACCACAGAGCACGCTAGTTTGGACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS CCA 90 bp | GGAGTGCTGTCCACTCGGAAGGTCTTAGTCCGGGCAGAAATGGAATaGCTGGGTGCTGAGTCAAACACATACTTGGTAGATTTCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVLSTRKVLVRAEME*LGAESNTYLVDFSG Trigger: TCCAGAGAAATCTACCAAGTATGTGTTTGACTCAGCACCCAGCCATTCCATTTCTGCCCGGACTAAGACCTTCCGAGTGGACAGCACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
||
| CDS TCA 90 bp | CACTCGGAAGGTCTTAGTCCGGGCAGAAATGGAATGGCTGGGTGCTaGGTCAAACACATACTTGGTAGATTTCTCTGGAAAGTAATCACC | + |
|
Preference number: 5 (lower is better) Translates to: HSEGLSPGRNGMAGC*VKHILGRFLWKVIT Trigger: GGTGATTACTTTCCAGAGAAATCTACCAAGTATGTGTTTGACTCAGCACCCAGCCATTCCATTTCTGCCCGGACTAAGACCTTCCGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | CCCAACTTGCTGCGGCCCTTGATGGAGAAGGAGGGCTaGGAGACCTTGCCCACCGTGTGGGGCCCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: PNLLRPLMEKEG*ETLPTVWGPIT Trigger: GGTGATGGGGCCCCACACGGTGGGCAAGGTCTCCCAGCCCTCCTTCTCCATCAAGGGCCGCAGCAAGTTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CAA 90 bp | GTCTTGTGCAGGTCGTCGCTGAAGCTGCCCAACTTGCTGCGGCCCTaGATGGAGAAGGAGGGCTGGGAGACCTTGCCCACCGTGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: VLCRSSLKLPNLLRP*MEKEGWETLPTVWG Trigger: GCCCCACACGGTGGGCAAGGTCTCCCAGCCCTCCTTCTCCATCAAGGGCCGCAGCAAGTTGGGCAGCTTCAGCGACGACCTGCACAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | GAGCCCCACGGAAGCTGTAGGCCGGTGCTCGGAGTTTaGTGGGTGTGTGCTTCACAAAGCCCGTGGTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: EPHGSCRPVLGV*WVCASQSPWWV Trigger: CACCCACCACGGGCTTTGTGAAGCACACACCCACCAAACTCCGAGCACCGGCCTACAGCTTCCGTGGGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CAA 90 bp | GCAGGACCTGGAGTCTTGTGCAGGTCGTCGCTGAAGCTGCCCAACTaGCTGCGGCCCTTGATGGAGAAGGAGGGCTGGGAGACCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: AGPGVLCRSSLKLPN*LRPLMEKEGWETLP Trigger: GGGCAAGGTCTCCCAGCCCTCCTTCTCCATCAAGGGCCGCAGCAAGTTGGGCAGCTTCAGCGACGACCTGCACAAGACTCCAGGTCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | CCCCACGGAAGCTGTAGGCCGGTGCTCGGAGTTTGGTaGGTGTGTGCTTCACAAAGCCCGTGGTGGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PHGSCRPVLGVW*VCASQSPWWVE Trigger: TTCCACCCACCACGGGCTTTGTGAAGCACACACCCACCAAACTCCGAGCACCGGCCTACAGCTTCCGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | CTTCAGGATCTTGGGGTTCACACTGTAGCGGGGCCCTaGGGAGCAATTCTCCGCCAAGAGCATGGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LQDLGVHTVAGP*GAILRQEHGSP Trigger: GGGGCTCCCATGCTCTTGGCGGAGAATTGCTCCCCAGGGCCCCGCTACAGTGTGAACCCCAAGATCCTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | GAAAGTAATCACCCGGGCCGGGGGTCAGCAAGGTCTTaGTATGGTAGCGCCCCAGGATGGAGTAGGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ESNHPGRGSARS*YGSAPGWSRQG Trigger: GCCCTGCCTACTCCATCCTGGGGCGCTACCATACCAAGACCTTGCTGACCCCCGGCCCGGGTGATTACTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | ATGGAGAAGGAGGGCTGGGAGACCTTGCCCACCGTGTaGGGCCCCATCACCACAGGCAGCATGTATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: MEKEGWETLPTV*GPITTGSMYAA Trigger: TGCTGCATACATGCTGCCTGTGGTGATGGGGCCCCACACGGTGGGCAAGGTCTCCCAGCCCTCCTTCTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS GCA 72 bp | CAAGAGCATGGGAGCCCCACGGAAGCTGTAGGCCGGTaGTCGGAGTTTGGTGGGTGTGTGCTTCACAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QEHGSPTEAVGR*SEFGGCVLHKA Trigger: GGCTTTGTGAAGCACACACCCACCAAACTCCGAGCACCGGCCTACAGCTTCCGTGGGGCTCCCATGCTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | AGGCAGGGCCAAGGTCCTTGCCAGTCTTCAGGATCTTaGGGTTCACACTGTAGCGGGGCCCTGGGGAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: RQGQGPCQSSGS*GSHCSGALGSN Trigger: ATTGCTCCCCAGGGCCCCGCTACAGTGTGAACCCCAAGATCCTGAAGACTGGCAAGGACCTTGGCCCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | CTGGCTCTGTCCATGGACAAGAGGGTGACCAGGTGCTaGGATGCCCTCCCTGTTGCATCTCATTCCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LALSMDKRVTRC*DALPVASHSWP Trigger: GGGCCAGGAATGAGATGCAACAGGGAGGGCATCCCAGCACCTGGTCACCCTCTTGTCCATGGACAGAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106049.2 |
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| CDS CCA 72 bp | GGGTCAGCAAGGTCTTGGTATGGTAGCGCCCCAGGATaGAGTAGGCAGGGCCAAGGTCCTTGCCAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GSARSWYGSAPG*SRQGQGPCQSS Trigger: TGAAGACTGGCAAGGACCTTGGCCCTGCCTACTCCATCCTGGGGCGCTACCATACCAAGACCTTGCTGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CAA 90 bp | CACCCGGGCAGCCATGGTGTACTGTGGAGCCTTGAACTTGGTCACTaGAACCTCAGTCTGACGGTATGCCGCAGGACCTGGAGTCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: HPGSHGVLWSLELGH*NLSLTVCRRTWSLV Trigger: CACAAGACTCCAGGTCCTGCGGCATACCGTCAGACTGAGGTTCAAGTGACCAAGTTCAAGGCTCCACAGTACACCATGGCTGCCCGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | CACTTGAACCTCAGTCTGACGGTATGCCGCAGGACCTaGAGTCTTGTGCAGGTCGTCGCTGAAGCTGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: HLNLSLTVCRRT*SLVQVVAEAAQ Trigger: TTGGGCAGCTTCAGCGACGACCTGCACAAGACTCCAGGTCCTGCGGCATACCGTCAGACTGAGGTTCAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | TTTGGTGGGTGTGTGCTTCACAAAGCCCGTGGTGGGTaGAATCAGGTACTTGGGTCCAGGGCTGCTGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: FGGCVLHKARGG*NQVLGSRAAVE Trigger: CTCTACAGCAGCCCTGGACCCAAGTACCTGATTCCACCCACCACGGGCTTTGTGAAGCACACACCCACCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS GCA 72 bp | CTTGAACTTGGTCACTTGAACCTCAGTCTGACGGTATaGCGCAGGACCTGGAGTCTTGTGCAGGTCGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: LELGHLNLSLTV*RRTWSLVQVVA Trigger: AGCGACGACCTGCACAAGACTCCAGGTCCTGCGGCATACCGTCAGACTGAGGTTCAAGTGACCAAGTTCAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CAA 72 bp | AGCCATGGTGTACTGTGGAGCCTTGAACTTGGTCACTaGAACCTCAGTCTGACGGTATGCCGCAGGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SHGVLWSLELGH*NLSLTVCRRTW Trigger: CCAGGTCCTGCGGCATACCGTCAGACTGAGGTTCAAGTGACCAAGTTCAAGGCTCCACAGTACACCATGGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CAA 72 bp | TGCTTGATGCCAAAGGTGACAGTAGGAGCACAGGGCTaGTTCAAGGTCACCTTCTCAGGGCTGTGGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CLMPKVTVGAQG*FKVTFSGLWAP Trigger: AGGAGCCCACAGCCCTGAGAAGGTGACCTTGAACAAGCCCTGTGCTCCTACTGTCACCTTTGGCATCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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| CDS CCA 72 bp | TCCACTCGGAAGGTCTTAGTCCGGGCAGAAATGGAATaGCTGGGTGCTGAGTCAAACACATACTTGGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: STRKVLVRAEME*LGAESNTYLVD Trigger: ATCTACCAAGTATGTGTTTGACTCAGCACCCAGCCATTCCATTTCTGCCCGGACTAAGACCTTCCGAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026555.12 ENSMUST00000106049.2 |
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