Pregenerated sensors for ODF2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028256Ensembl transcript IDs: ENSMUST00000029920.15, ENSMUST00000098538.9, ENSMUST00000098539.7, ENSMUST00000106192.9, ENSMUST00000195926.2, ENSMUST00000196552.5, ENSMUST00000196857.5, ENSMUST00000198764.2, ENSMUST00000199124.5, ENSMUST00000200353.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCCCTCTTCTGAATTTGGCGCTGTAGACGATCGTGCACTACTTTaGCTGATTGAGAAAGCCTGTTTGCTTTCAAAGCACTTTCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: LPSSEFGAVDDRALL*LIEKACLLSKHFPF Trigger: AAAAGGAAAGTGCTTTGAAAGCAAACAGGCTTTCTCAATCAGTCAAAGTAGTGCACGATCGTCTACAGCGCCAAATTCAGAAGAGGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196552.5 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGCTGTGCTGTATTTCCTTCAAGCAGATAGCCTGGTGCTGGGTTTTAGTGAGCCCTCTCTCTAGATaGCATTTTCTCTACTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SRLCCISFKQIAWCWVLVSPLSR*HFLYFF Trigger: GAAGAAGTAGAGAAAATGTCATCTAGAGAGAGGGCT...CACTAAAACCCAGCACCAGGCTATCTGCTTGAAGGAAATACAGCACAGCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGCTGTGCTGTATTTCCTTCAAGCAGATAGCCTGGTGCTGGGTTTTAGTGAGTTCCATAGAAGATTaGTTTCCTAGTATGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SRLCCISFKQIAWCWVLVSSIED*FPSMCK Trigger: CTTGCACATACTAGGAAATCAATCTTCTATGGAACT...CACTAAAACCCAGCACCAGGCTATCTGCTTGAAGGAAATACAGCACAGCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCTTTCAAAGCACTTTCCTTTTCATTCTGAAACAGACACGAGAGTTCACGGACACTTTCATTGTCACTaGGATCCTTCAACAAGCATA | + |
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Preference number: 2 (lower is better) Translates to: LLSKHFPFHSETDTRVHGHFHCH*DPSTSI Trigger: TATGCTTGTTGAAGGATCTCAGTGACAATGAAAGTG...TCCGTGAACTCTCGTGTCTGTTTCAGAATGAAAAGGAAAGTGCTTTGAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196552.5 |
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| 3UTR CAA 90 bp | TCCTTTTCAAGTACTTTTTCCTCAAGGTTTCTGTTCTCACTTTCATaGTCACTGAGATCCTTCAACAAGCATAGCAAGCTGTCTCCTATT | + |
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Preference number: 2 (lower is better) Translates to: SFSSTFSSRFLFSLS*SLRSFNKHSKLSPI Trigger: AATAGGAGACAGCTTGCTATGCTTGTTGAAGGATCTCAGTGACAATGAAAGTGAGAACAGAAACCTTGAGGAAAAAGTACTTGAAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196552.5 |
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| 3UTR GCA 72 bp | AGGCTGTGCTGTATTTCCTTCAAGCAGATAGCCTGGTaGTGGGTTTTAGTGTTCATCTTGTCAACAAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: RLCCISFKQIAW*WVLVFILSTSW Trigger: CCAACTTGTTGACAAGATGAACACTAAAACCCAGCACCAGGCTATCTGCTTGAAGGAAATACAGCACAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| 3UTR TCA 72 bp | TCTGAATTTGGCGCTGTAGACGATCGTGCACTACTTTaGCTGATTGAGAAAGCCTGTTTGCTTTCAAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SEFGAVDDRALL*LIEKACLLSKH Trigger: GTGCTTTGAAAGCAAACAGGCTTTCTCAATCAGTCAAAGTAGTGCACGATCGTCTACAGCGCCAAATTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196552.5 |
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| 3UTR CCA 72 bp | TCAAGGCTGTGCTGTATTTCCTTCAAGCAGATAGCCTaGTGCTGGGTTTTAGTGTTCATCTTGTCAACAAGT | + |
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Preference number: 3 (lower is better) Translates to: SRLCCISFKQIA*CWVLVFILSTS Trigger: ACTTGTTGACAAGATGAACACTAAAACCCAGCACCAGGCTATCTGCTTGAAGGAAATACAGCACAGCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| 3UTR TCA 72 bp | TGTTCTTTTAGCTTTTCATTCTCAGCTTCCCTCTTCTaGATTTGGCGCTGTAGACGATCGTGCACTACTTTG | + |
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Preference number: 3 (lower is better) Translates to: CSFSFSFSASLF*IWRCRRSCTTL Trigger: CAAAGTAGTGCACGATCGTCTACAGCGCCAAATTCAGAAGAGGGAAGCTGAGAATGAAAAGCTAAAAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196552.5 |
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| 3UTR-3UTR CAA 90 bp | ACTTTCCTTTTCATTCTGAAACAGACACGAGAGTTCACGGATATAGGTCTCCTTCAAGCTGTCTCCTATTaGTTCATAGTCAGTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: TFLFILKQTREFTDIGLLQAVSY*FIVSLF Trigger: AAACAGACTGACTATGAACAAATAGGAGACAGCTTG...AAGGAGACCTATATCCGTGAACTCTCGTGTCTGTTTCAGAATGAAAAGGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196552.5 |
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| CDS-3UTR CCA 90 bp | CTCTCATTCCGAGTCTCCGACTTCTCAAGGCTGTGCTGTATTTCCTTCAAGCAGCGGCTTCCAGTTGCCTaGACAGGGCTGTGTACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSFRVSDFSRLCCISFKQRLPVA*TGLCTL Trigger: CAGAGTACACAGCCCTGTCCAGGCAACTGGAAGCCG...CTGCTTGAAGGAAATACAGCACAGCCTTGAGAAGTCGGAGACTCGGAATGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| CDS TCA 90 bp | GCAGCGCTGCAGCTTCTCCTGACACTCCTGAAGTCTCTGTTCGGCTaGCGTGAAGGAGCTGCGGGCTTGCTCTACCTGCTTCAGATTCGA | + |
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Preference number: 5 (lower is better) Translates to: AALQLLLTLLKSLFG*REGAAGLLYLLQIR Trigger: TCGAATCTGAAGCAGGTAGAGCAAGCCCGCAGCTCCTTCACGTCAGCCGAACAGAGACTTCAGGAGTGTCAGGAGAAGCTGCAGCGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS TCA 90 bp | GCTGCAGCTTCTCCTGACACTCCTGAAGTCTCTGTTCGGCTGACGTaGAGGAGCTGCGGGCTTGCTCTACCTGCTTCAGATTCGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: AAASPDTPEVSVRLT*RSCGLALPASDSTP Trigger: TGGAGTCGAATCTGAAGCAGGTAGAGCAAGCCCGCAGCTCCTTCACGTCAGCCGAACAGAGACTTCAGGAGTGTCAGGAGAAGCTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS TCA 90 bp | GAAGGCTTTGGTTTCCATCAACCCGGTTCCTCCCCTTTGTGGCTTTaGCCTGGGCTTTCACTGCATTCCCGAGCAGCAGAGGGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: EGFGFHQPGSSPLWL*PGLSLHSRAAEGMC Trigger: GCACATCCCCTCTGCTGCTCGGGAATGCAGTGAAAGCCCAGGTCAAAGCCACAAAGGGGAGGAACCGGGTTGATGGAAACCAAAGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS CCA 90 bp | CTTTGGTTTCCATCAACCCGGTTCCTCCCCTTTGTGGCTTTGACCTaGGCTTTCACTGCATTCCCGAGCAGCAGAGGGGATGTGCATGAG | + |
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Preference number: 5 (lower is better) Translates to: LWFPSTRFLPFVALT*AFTAFPSSRGDVHE Trigger: CTCATGCACATCCCCTCTGCTGCTCGGGAATGCAGTGAAAGCCCAGGTCAAAGCCACAAAGGGGAGGAACCGGGTTGATGGAAACCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS GCA 90 bp | AGGGCTGTGTACTCTGCAGCCTTCTCTTTCAGCTCCAGGTCACTGTaGTTGAGACACTCCTCTTGGTCGGCCAGCTTCTTCTCAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: RAVYSAAFSFSSRSL*LRHSSWSASFFSSS Trigger: AGAGCTTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAAGAGAAGGCTGCAGAGTACACAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS TCA 90 bp | TTCCAGTCACTGGAAGCTGAAACTGTTTCAGACAGCTTGGCTTCCTaGTCTCTGACTTGGGAGGCGAGGCGCTCGATATCCCCTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: FQSLEAETVSDSLAS*SLTWEARRSISPVK Trigger: CTTCACAGGGGATATCGAGCGCCTCGCCTCCCAAGTCAGAGATCAGGAAGCCAAGCTGTCTGAAACAGTTTCAGCTTCCAGTGACTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS GCA 90 bp | AGTCTCTGTTCGGCTGACGTGAAGGAGCTGCGGGCTTGCTCTACCTaGTTCAGATTCGACTCCACCTGGCCTCTCATCTTCTCTAACTTT | + |
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Preference number: 5 (lower is better) Translates to: SLCSADVKELRACST*FRFDSTWPLIFSNF Trigger: AAAGTTAGAGAAGATGAGAGGCCAGGTGGAGTCGAATCTGAAGCAGGTAGAGCAAGCCCGCAGCTCCTTCACGTCAGCCGAACAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS CCA 90 bp | CTGAAACCTTTTGTCTTCCTTCTTCCAAAGCGGCTTCCAGTTGCCTaGACAGGGCTGTGTACTCTGCAGCCTTCTCTTTCAGCTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: LKPFVFLLPKRLPVA*TGLCTLQPSLSAPG Trigger: ACCTGGAGCTGAAAGAGAAGGCTGCAGAGTACACAGCCCTGTCCAGGCAACTGGAAGCCGCTTTGGAAGAAGGAAGACAAAAGGTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS TCA 90 bp | CTGTGTACTCTGCAGCCTTCTCTTTCAGCTCCAGGTCACTGTGCTTaGGACACTCCTCTTGGTCGGCCAGCTTCTTCTCAAGCTCTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LCTLQPSLSAPGHCA*DTPLGRPASSQALY Trigger: ATAAAGAGCTTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAAGAGAAGGCTGCAGAGTACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS GCA 90 bp | TCTTCTGAAACCTTTTGTCTTCCTTCTTCCAAAGCGGCTTCCAGTTaGCTGGACAGGGCTGTGTACTCTGCAGCCTTCTCTTTCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSETFCLPSSKAASS*LDRAVYSAAFSFSS Trigger: GGAGCTGAAAGAGAAGGCTGCAGAGTACACAGCCCTGTCCAGGCAACTGGAAGCCGCTTTGGAAGAAGGAAGACAAAAGGTTTCAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS CCA 90 bp | GCCTTCTCTTTCAGCTCCAGGTCACTGTGCTTGAGACACTCCTCTTaGTCGGCCAGCTTCTTCTCAAGCTCTTTATTCTCTGCATCCATC | + |
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Preference number: 5 (lower is better) Translates to: AFSFSSRSLCLRHSS*SASFFSSSLFSASI Trigger: GATGGATGCAGAGAATAAAGAGCTTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAAGAGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS GCA 90 bp | CAACTGAGCTTCCTTAAGCGTTGCTTTCAACTCCATCTTTGTATTTaGGACGTCTTGCTTGAGCCTGCTGAGGTGCTTCTCAGGGGCACA | + |
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Preference number: 5 (lower is better) Translates to: QLSFLKRCFQLHLCI*DVLLEPAEVLLRGT Trigger: TGTGCCCCTGAGAAGCACCTCAGCAGGCTCAAGCAAGACGTCGCAAATACAAAGATGGAGTTGAAAGCAACGCTTAAGGAAGCTCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 |
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| CDS-3UTR CAA 90 bp | AAACTGCAAGTAATTCTTAATGCTCTCATTCCGAGTCTCCGACTTCTCAAGGCTCAAAGCGGCTTCCAGTaGCCTGGACAGGGCTGTGTA | + |
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Preference number: 5 (lower is better) Translates to: KLQVILNALIPSLRLLKAQSGFQ*PGQGCV Trigger: TACACAGCCCTGTCCAGGCAACTGGAAGCCGCTTTG...AGCCTTGAGAAGTCGGAGACTCGGAATGAGAGCATTAAGAATTACTTGCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| CDS TCA 90 bp | TTCTATGGCAATTTTCTCGAACTGACTTTTCCAGTCACTGGAAGCTaGAACTGTTTCAGACAGCTTGGCTTCCTGATCTCTGACTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: FYGNFLELTFPVTGS*NCFRQLGFLISDLG Trigger: TCCCAAGTCAGAGATCAGGAAGCCAAGCTGTCTGAAACAGTTTCAGCTTCCAGTGACTGGAAAAGTCAGTTCGAGAAAATTGCCATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS-3UTR CAA 90 bp | TCAAGGCTGTGCTGTATTTCCTTCAAGCAGATAGCCTGGTGCTGGGTTTTAGTGTCAATTCCAGTACTTTaGTCTTCCTTCTTCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SRLCCISFKQIAWCWVLVSIPVL*SSFFQS Trigger: GCTTTGGAAGAAGGAAGACAAAAGTACTGGAATTGA...CACTAAAACCCAGCACCAGGCTATCTGCTTGAAGGAAATACAGCACAGCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200353.2 |
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| CDS CCA 90 bp | AAGGAGCTGCGGGCTTGCTCTACCTGCTTCAGATTCGACTCCACCTaGCCTCTCATCTTCTCTAACTTTTTGTTTTTATTCGTTATTATT | + |
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Preference number: 5 (lower is better) Translates to: KELRACSTCFRFDST*PLIFSNFLFLFVII Trigger: AATAATAACGAATAAAAACAAAAAGTTAGAGAAGATGAGAGGCCAGGTGGAGTCGAATCTGAAGCAGGTAGAGCAAGCCCGCAGCTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS CCA 90 bp | TGGCTACAGCCTCTTGCTTATTCATTTTCACCTGCAAGTTCCACTTaGCTATTTGGGTTTCCAAGCTCTGTACATGTTCTTTTAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: WLQPLAYSFSPASST*LFGFPSSVHVLLAF Trigger: AAAAGCTAAAAGAACATGTACAGAGCTTGGAAACCCAAATAGCCAAGTGGAACTTGCAGGTGAAAATGAATAAGCAAGAGGCTGTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS TCA 90 bp | TTCTTAAATAATGGCAAAAGTAATTCAACTGAACAGGATGCCAACTaGGCTTCCTTAAGCGTTGCTTTCAACTCCATCTTTGTATTTGCG | + |
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Preference number: 5 (lower is better) Translates to: FLNNGKSNSTEQDAN*ASLSVAFNSIFVFA Trigger: CGCAAATACAAAGATGGAGTTGAAAGCAACGCTTAAGGAAGCTCAGTTGGCATCCTGTTCAGTTGAATTACTTTTGCCATTATTTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 |
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| CDS GCA 72 bp | TCGGCTGACGTGAAGGAGCTGCGGGCTTGCTCTACCTaGTTCAGATTCGACTCCACCTGGCCTCTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SADVKELRACST*FRFDSTWPLIF Trigger: GAAGATGAGAGGCCAGGTGGAGTCGAATCTGAAGCAGGTAGAGCAAGCCCGCAGCTCCTTCACGTCAGCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS CCA 72 bp | CCATCAACCCGGTTCCTCCCCTTTGTGGCTTTGACCTaGGCTTTCACTGCATTCCCGAGCAGCAGAGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PSTRFLPFVALT*AFTAFPSSRGD Trigger: ATCCCCTCTGCTGCTCGGGAATGCAGTGAAAGCCCAGGTCAAAGCCACAAAGGGGAGGAACCGGGTTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS TCA 72 bp | CAGCTTCTCCTGACACTCCTGAAGTCTCTGTTCGGCTaGCGTGAAGGAGCTGCGGGCTTGCTCTACCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QLLLTLLKSLFG*REGAAGLLYLL Trigger: AAGCAGGTAGAGCAAGCCCGCAGCTCCTTCACGTCAGCCGAACAGAGACTTCAGGAGTGTCAGGAGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS TCA 72 bp | GGTTTCCATCAACCCGGTTCCTCCCCTTTGTGGCTTTaGCCTGGGCTTTCACTGCATTCCCGAGCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GFHQPGSSPLWL*PGLSLHSRAAE Trigger: CTCTGCTGCTCGGGAATGCAGTGAAAGCCCAGGTCAAAGCCACAAAGGGGAGGAACCGGGTTGATGGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS TCA 72 bp | TCTCCTGACACTCCTGAAGTCTCTGTTCGGCTGACGTaGAGGAGCTGCGGGCTTGCTCTACCTGCTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SPDTPEVSVRLT*RSCGLALPASD Trigger: ATCTGAAGCAGGTAGAGCAAGCCCGCAGCTCCTTCACGTCAGCCGAACAGAGACTTCAGGAGTGTCAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS CAA 72 bp | TGGTTTCCATCAACCCGGTTCCTCCCCTTTGTGGCTTaGACCTGGGCTTTCACTGCATTCCCGAGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WFPSTRFLPFVA*TWAFTAFPSSR Trigger: TCTGCTGCTCGGGAATGCAGTGAAAGCCCAGGTCAAAGCCACAAAGGGGAGGAACCGGGTTGATGGAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS TCA 72 bp | CTGGAAGCTGAAACTGTTTCAGACAGCTTGGCTTCCTaGTCTCTGACTTGGGAGGCGAGGCGCTCGATATCC | + |
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Preference number: 6 (lower is better) Translates to: LEAETVSDSLAS*SLTWEARRSIS Trigger: GGATATCGAGCGCCTCGCCTCCCAAGTCAGAGATCAGGAAGCCAAGCTGTCTGAAACAGTTTCAGCTTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS TCA 72 bp | CTGCAGCCTTCTCTTTCAGCTCCAGGTCACTGTGCTTaGGACACTCCTCTTGGTCGGCCAGCTTCTTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: LQPSLSAPGHCA*DTPLGRPASSQ Trigger: TTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAAGAGAAGGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS TCA 72 bp | TTGGTCAGAAGGCTTTGGTTTCCATCAACCTGGCCTTaGAGCTCCCTAATGGTGAGCGCCTGCTCTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: LVRRLWFPSTWP*SSLMVSACSAH Trigger: GTGTGCAGAGCAGGCGCTCACCATTAGGGAGCTTCAAGGCCAGGTTGATGGAAACCAAAGCCTTCTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098538.9 |
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| CDS GCA 72 bp | TTTGTATTTGCGACGTCTTGCTTGAGCCTGCTGAGGTaGTTCTCAGGGGCACACTGTGGAGCAGATCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FVFATSCLSLLR*FSGAHCGADPL Trigger: GAGAGGATCTGCTCCACAGTGTGCCCCTGAGAAGCACCTCAGCAGGCTCAAGCAAGACGTCGCAAATACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 ENSMUST00000199124.5 |
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| CDS GCA 72 bp | TACTCTGCAGCCTTCTCTTTCAGCTCCAGGTCACTGTaGTTGAGACACTCCTCTTGGTCGGCCAGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YSAAFSFSSRSL*LRHSSWSASFF Trigger: GAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAAGAGAAGGCTGCAGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS CCA 72 bp | CTTGAGCCTGCTGAGGTGCTTCTCAGGGGCACACTGTaGAGCAGATCCTCTCTCCCGGATGAGATAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LEPAEVLLRGTL*SRSSLPDEIRN Trigger: ATTTCTTATCTCATCCGGGAGAGAGGATCTGCTCCACAGTGTGCCCCTGAGAAGCACCTCAGCAGGCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 ENSMUST00000199124.5 |
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| CDS CAA 72 bp | AACTGTTTCAGACAGCTTGGCTTCCTGATCTCTGACTaGGGAGGCGAGGCGCTCGATATCCCCTGTGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: NCFRQLGFLISD*GGEALDIPCEV Trigger: CACTTCACAGGGGATATCGAGCGCCTCGCCTCCCAAGTCAGAGATCAGGAAGCCAAGCTGTCTGAAACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS TCA 72 bp | CAGGGGCACACTGTGGAGCAGATCCTCTCTCCCGGATaGGATAAGAAATCAGGCCCTCTGAAAGACTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QGHTVEQILSPG*DKKSGPLKDFH Trigger: ATGGAAGTCTTTCAGAGGGCCTGATTTCTTATCTCATCCGGGAGAGAGGATCTGCTCCACAGTGTGCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196552.5 ENSMUST00000196857.5 ENSMUST00000199124.5 |
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| CDS GCA 72 bp | ACCTTTTGTCTTCCTTCTTCCAAAGCGGCTTCCAGTTaGCTGGACAGGGCTGTGTACTCTGCAGCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: TFCLPSSKAASS*LDRAVYSAAFS Trigger: AGAGAAGGCTGCAGAGTACACAGCCCTGTCCAGGCAACTGGAAGCCGCTTTGGAAGAAGGAAGACAAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS CAA 72 bp | AACCTTTTGTCTTCCTTCTTCCAAAGCGGCTTCCAGTaGCCTGGACAGGGCTGTGTACTCTGCAGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: NLLSSFFQSGFQ*PGQGCVLCSLL Trigger: GAGAAGGCTGCAGAGTACACAGCCCTGTCCAGGCAACTGGAAGCCGCTTTGGAAGAAGGAAGACAAAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS GCA 72 bp | GTTGCTTTCAACTCCATCTTTGTATTTGCGACGTCTTaGTTGAGCCTGCTGAGGTGCTTCTCAGGGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: VAFNSIFVFATS*LSLLRCFSGAH Trigger: GTGTGCCCCTGAGAAGCACCTCAGCAGGCTCAAGCAAGACGTCGCAAATACAAAGATGGAGTTGAAAGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 ENSMUST00000199124.5 |
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| CDS CCA 72 bp | TTTGTCTTCCTTCTTCCAAAGCGGCTTCCAGTTGCCTaGACAGGGCTGTGTACTCTGCAGCCTTCTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: FVFLLPKRLPVA*TGLCTLQPSLS Trigger: TGAAAGAGAAGGCTGCAGAGTACACAGCCCTGTCCAGGCAACTGGAAGCCGCTTTGGAAGAAGGAAGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 |
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| CDS CAA 72 bp | GCTTTCAACTCCATCTTTGTATTTGCGACGTCTTGCTaGAGCCTGCTGAGGTGCTTCTCAGGGGCACACTGT | + |
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Preference number: 6 (lower is better) Translates to: AFNSIFVFATSC*SLLRCFSGAHC Trigger: ACAGTGTGCCCCTGAGAAGCACCTCAGCAGGCTCAAGCAAGACGTCGCAAATACAAAGATGGAGTTGAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 ENSMUST00000199124.5 |
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| CDS CAA 72 bp | CGTTGCTTTCAACTCCATCTTTGTATTTGCGACGTCTaGCTTGAGCCTGCTGAGGTGCTTCTCAGGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: RCFQLHLCICDV*LEPAEVLLRGT Trigger: TGTGCCCCTGAGAAGCACCTCAGCAGGCTCAAGCAAGACGTCGCAAATACAAAGATGGAGTTGAAAGCAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000196857.5 ENSMUST00000199124.5 |
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| CDS CAA 90 bp | AGCCTTCTCTTTCAGCTCCAGGTCACTGTGCTTGAGACACTCCTCTaGGTCGGCCAGCTTCTTCTCAAGCTCTTTATTCTCTGCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLLFQLQVTVLETLL*VGQLLLKLFILCIH Trigger: ATGGATGCAGAGAATAAAGAGCTTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAAGAGAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS CCA 72 bp | TTCAGCTCCAGGTCACTGTGCTTGAGACACTCCTCTTaGTCGGCCAGCTTCTTCTCAAGCTCTTTATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FSSRSLCLRHSS*SASFFSSSLFS Trigger: AGAGAATAAAGAGCTTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS CAA 72 bp | TTTCAGCTCCAGGTCACTGTGCTTGAGACACTCCTCTaGGTCGGCCAGCTTCTTCTCAAGCTCTTTATTCTC | + |
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Preference number: 6 (lower is better) Translates to: FQLQVTVLETLL*VGQLLLKLFIL Trigger: GAGAATAAAGAGCTTGAGAAGAAGCTGGCCGACCAAGAGGAGTGTCTCAAGCACAGTGACCTGGAGCTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS CCA 72 bp | TTTTCTTCCTCAAGAGAAAGCTTGGTCAGAAGGCTTTaGTTTCCATCAACCCGGTTCCTCCCCTTTGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: FSSSRESLVRRL*FPSTRFLPFVA Trigger: AGCCACAAAGGGGAGGAACCGGGTTGATGGAAACCAAAGCCTTCTGACCAAGCTTTCTCTTGAGGAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS CAA 90 bp | AATGAGATGATTTTCTTCCTCAAGAGAAAGCTTGGTCAGAAGGCTTaGGTTTCCATCAACCCGGTTCCTCCCCTTTGTGGCTTTGACCTG | + |
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Preference number: 6 (lower is better) Translates to: NEMIFFLKRKLGQKA*VSINPVPPLCGFDL Trigger: CAGGTCAAAGCCACAAAGGGGAGGAACCGGGTTGATGGAAACCAAAGCCTTCTGACCAAGCTTTCTCTTGAGGAAGAAAATCATCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195926.2 |
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| CDS CCA 72 bp | CTATGGCAATTTTCTCGAACTGACTTTTCCAGTCACTaGAAGCTGAAACTGTTTCAGACAGCTTGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LWQFSRTDFSSH*KLKLFQTAWLP Trigger: AGGAAGCCAAGCTGTCTGAAACAGTTTCAGCTTCCAGTGACTGGAAAAGTCAGTTCGAGAAAATTGCCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS CCA 72 bp | CCTCTTGCTTATTCATTTTCACCTGCAAGTTCCACTTaGCTATTTGGGTTTCCAAGCTCTGTACATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PLAYSFSPASST*LFGFPSSVHVL Trigger: AAGAACATGTACAGAGCTTGGAAACCCAAATAGCCAAGTGGAACTTGCAGGTGAAAATGAATAAGCAAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS CAA 72 bp | TTGTACCTGAGTCCTGTATCCTTCGACGAGGGTTTTTaGTCGTTTTTCTACTTCTTGCAGTTCTACAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LYLSPVSFDEGF*SFFYFLQFYKF Trigger: GAACTTGTAGAACTGCAAGAAGTAGAAAAACGACAAAAAACCCTCGTCGAAGGATACAGGACTCAGGTACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000195926.2 |
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| CDS CAA 90 bp | ATGGCTACAGCCTCTTGCTTATTCATTTTCACCTGCAAGTTCCACTaGGCTATTTGGGTTTCCAAGCTCTGTACATGTTCTTTTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: MATASCLFIFTCKFH*AIWVSKLCTCSFSF Trigger: AAAGCTAAAAGAACATGTACAGAGCTTGGAAACCCAAATAGCCAAGTGGAACTTGCAGGTGAAAATGAATAAGCAAGAGGCTGTAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029920.15 ENSMUST00000098538.9 ENSMUST00000098539.7 ENSMUST00000106192.9 ENSMUST00000198764.2 |
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| CDS CAA 90 bp | TCCTTTTCAAGTACTTTTTCCTCAAGGTTTCTGTTCTCACTTTCATaGTCACTGAGATCCTTCAACAAGCATAGCAAGCTGTCTCCTATG | + |
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Preference number: 6 (lower is better) Translates to: SFSSTFSSRFLFSLS*SLRSFNKHSKLSPM Trigger: CATAGGAGACAGCTTGCTATGCTTGTTGAAGGATCTCAGTGACAATGAAAGTGAGAACAGAAACCTTGAGGAAAAAGTACTTGAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029920.15 |
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