Pregenerated sensors for ODC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011179Ensembl transcript IDs: ENSMUST00000171737.3, ENSMUST00000221613.2, ENSMUST00000222617.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTaGCATCATCCTGCTCCTCCACCTCCGGCGGGAAGCCATGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GDGPSRSPGHKTWAA*HHPAPPPPAGSHGS Trigger: AGAGCCATGGCTTCCCGCCGGAGGTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGTCACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR GCA 90 bp | ATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTaGTCCTCCACCTCCGGCGGGAAGCCATGGCTCTGGATCTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: IPLSWAQDMGSVPSS*SSTSGGKPWLWICF Trigger: GAAGCAGATCCAGAGCCATGGCTTCCCGCCGGAGGTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR TCA 90 bp | GCTCCTCCACCTCCGGCGGGAAGCCATGGCTCTGGATCTGCTTCATaGGTTGCCACATTGGCCGTGACATTACATAGTAGATGTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: APPPPAGSHGSGSAS*VATLAVTLHSRCLA Trigger: GGCCAAACATCTACTATGTAATGTCACGGCCAATGTGGCAACTCATGAAGCAGATCCAGAGCCATGGCTTCCCGCCGGAGGTGGAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR CCA 90 bp | TCAGGGTTTCTGCAGGCAAGGACTTCAGATGACCTCCCTAGGAAGTaGCCATGCCAACCGGTCACTAGGCAGGTGACATTCCTCACCAAC | + |
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Preference number: 1 (lower is better) Translates to: SGFLQARTSDDLPRK*PCQPVTRQVTFLTN Trigger: GTTGGTGAGGAATGTCACCTGCCTAGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTGCAGAAACCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR GCA 90 bp | TTTCTGCAGGCAAGGACTTCAGATGACCTCCCTAGGAAGTGGCCATaGCAACCGGTCACTAGGCAGGTGACATTCCTCACCAACAGACTC | + |
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Preference number: 1 (lower is better) Translates to: FLQARTSDDLPRKWP*QPVTRQVTFLTNRL Trigger: GAGTCTGTTGGTGAGGAATGTCACCTGCCTAGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTGCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR CCA 90 bp | CACCAACAGACTCTGGGCAACAAAGTTCTCAGCCAACTGCACACTTaGGATGGGCTAAGCAGACTGATGCTGTACAGAGAGGGCACAGCC | + |
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Preference number: 1 (lower is better) Translates to: HQQTLGNKVLSQLHT*DGLSRLMLYREGTA Trigger: GGCTGTGCCCTCTCTGTACAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCCAGAGTCTGTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR CCA 90 bp | ACAGACTCTGGGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATaGGCTAAGCAGACTGATGCTGTACAGAGAGGGCACAGCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: TDSGQQSSQPTAHLG*AKQTDAVQRGHSLV Trigger: CACAAGGCTGTGCCCTCTCTGTACAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCCAGAGTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTCCACGGCACCCCAAGCCCCTaGACCAACTGTATTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: PALLGTRHGQRAIILLLHGTPSP*TNCISV Trigger: GACTGAAATACAGTTGGTGCAGGGGCTTGGGGTGCC...GTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTCCACTCCCCAGATGCTGGATaGGTAATACTTCTCGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PALLGTRHGQRAIILLLHSPDAG*VILLVW Trigger: CCAGACGAGAAGTATTACTCATCCAGCATCTGGGGA...GTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGGCTGCAGGGTGACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGGGGAAGCCATGGCTCTaGATCTGCTTCATGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: KHRLQGDGPSRSPGHKTWGKPWL*ICFMSC Trigger: GCAACTCATGAAGCAGATCCAGAGCCATGGCTTCCC...CCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGTCACCCTGCAGCCTGTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR GCA 90 bp | ACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGGATCAGTACATCCACTaGCCACATGGAAGCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: TVHPALLGTRHGQRAIILDQYIH*PHGSSH Trigger: GTGTGAGCTTCCATGTGGGCAGTGGATGTACTGATC...CAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTCCACATCCAATCACCCACATaGATTTCAGGCAGGTTACAG | + |
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Preference number: 2 (lower is better) Translates to: PALLGTRHGQRAIILLLHIQSPT*ISGRLQ Trigger: CTGTAACCTGCCTGAAATGCATGTGGGTGATTGGAT...GTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | ACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCCATGGCTCTGGATCTaGTTCATGAGTTGCCACATT | + |
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Preference number: 2 (lower is better) Translates to: TVHPALLGTRHGQRAIILPWLWI*FMSCHI Trigger: AATGTGGCAACTCATGAAGCAGATCCAGAGCCATGG...CAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR GCA 90 bp | CAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCACGATCCGATCAAGGAGCAGAAGCACAGGCTaGAGGGTGACGGTCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: QSPTCISGRLQRSTIRSRSRSTG*RVTVHP Trigger: GGGATGGACCGTCACCCTGCAGCCTGTGCTTCTGCT...CCTTGATCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCACGATCCGATCAAGGTCCATCCCGCTCTCCTaGGCACAAGACATGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: QSPTCISGRLQRSTIRSRSIPLS*AQDMGS Trigger: GCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGA...CCTTGATCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCACAGGCTGCAGGGTGACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGATCCAATCACCCACATaGATTTCAGGCAGGTTACAG | + |
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Preference number: 2 (lower is better) Translates to: KHRLQGDGPSRSPGHKTWIQSPT*ISGRLQ Trigger: CTGTAACCTGCCTGAAATGCATGTGGGTGATTGGAT...CCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGTCACCCTGCAGCCTGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTTGGTCCCCAGATGCTaGATGAGTAATACTTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: SIPLSWAQDMGSVPSSCSLVPRC*MSNTSR Trigger: ACGAGAAGTATTACTCATCCAGCATCTGGGGACCAA...GGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATGCAGTGGGTCTCTCCATaGCACAGCAGCCTGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: GNKVLSQLHTWDGLSRLMQWVSP*HSSLCR Trigger: TCTGCACAGGCTGCTGTGTCATGGAGAGACCCACTG...CATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR TCA 90 bp | CAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCACGATCCGATCAAGGGCATCCGACACTGCCTaGACGAAGGTCTCAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: QSPTCISGRLQRSTIRSRASDTA*TKVSGS Trigger: TGATCCTGAGACCTTCGTTCAGGCAGTGTCGGATGC...CCTTGATCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTCCACCCAATATCAAGCAGATaGATGCTGAAACCAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: PALLGTRHGQRAIILLLHPISSR*MLKPTS Trigger: AGAAGTTGGTTTCAGCATGCATCTGCTTGATATTGG...GTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR CAA 90 bp | TCACCAACAGACTCTGGGCAACAAAGTTCTCAGCCAACTGCACACTaGGGATGGGCTAAGCAGACTGATGCTGTACAGAGAGGGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: SPTDSGQQSSQPTAH*GWAKQTDAVQRGHS Trigger: GCTGTGCCCTCTCTGTACAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCCAGAGTCTGTTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR CCA 90 bp | ACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCAAGAGCTACAAGAATaGCATCTACACATTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: TVHPALLGTRHGQRAIILQELQE*HLHIDP Trigger: AGGATCAATGTGTAGATGCCATTCTTGTAGCTCTTG...CAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCACAGGCTGCAGGGTGACGGTCCATCCCGCTCTCCTGGGCACAAGACATGCAGCATACTTGATTTaGGAGACTTGTTTACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RSTGCRVTVHPALLGTRHAAYLI*ETCLQG Trigger: TCCTTGTAAACAAGTCTCTCAAATCAAGTATGCTGC...ATGTCTTGTGCCCAGGAGAGCGGGATGGACCGTCACCCTGCAGCCTGTGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCATGTTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGGCTTGGGTCTCTTCTaGAGCAGGGCCTTCACATGG | + |
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Preference number: 2 (lower is better) Translates to: THVLKQHPITHMHFRQVTGLGLF*SRAFTW Trigger: CCATGTGAAGGCCCTGCTGCAGAAGAGACCCAAGCC...TGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAACATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAGCGGGCATCCGACACTaGCTGAACGAAGGTCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: CIGANPTLTKTSQTSSKLAGIRH*LNEGLR Trigger: CCTGAGACCTTCGTTCAGGCAGTGTCGGATGCCCGC...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATACTTCTCGTCTGGCTTaGGTCTCTTCTGCAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: HLLAFHTALVPTLLSQRHTSRLA*VSSAAG Trigger: CCCTGCTGCAGAAGAGACCCAAGCCAGACGAGAAGT...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCATGTTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACACCTGGGCACAAGACATaGGCAGCGTGCCATCATCCT | + |
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Preference number: 2 (lower is better) Translates to: THVLKQHPITHMHFRQVTPGHKT*AACHHP Trigger: AGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGG...TGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAACATGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCTCCCCAGATGCTGGATaGGTAATACTTCTCGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FSNSIQSPTCISGRLQRSSPDAG*VILLVW Trigger: CCAGACGAGAAGTATTACTCATCCAGCATCTGGGGA...GGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAGGCTTGGGTCTCTTCTaGAGCAGGGCCTTCACATGG | + |
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Preference number: 2 (lower is better) Translates to: CIGANPTLTKTSQTSSKLGLGLF*SRAFTW Trigger: CCATGTGAAGGCCCTGCTGCAGAAGAGACCCAAGCC...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAGGACTTCAGATGACCTCCCTAGGAAGTGGCCATGCCAACCGGTCACTTACATAGTAGATGTTTaGCCTCTGGAACCCATTGAA | + |
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Preference number: 2 (lower is better) Translates to: QARTSDDLPRKWPCQPVTYIVDV*PLEPIE Trigger: TTCAATGGGTTCCAGAGGCCAAACATCTACTATGTA...AGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTACCTGGGCACAAGACATaGGCAGCGTGCCATCATCCT | + |
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Preference number: 2 (lower is better) Translates to: CIGANPTLTKTSQTSSKLPGHKT*AACHHP Trigger: AGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGG...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATAGCAGCAACAGTGTATaGACCCATGTTCTCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: GQQSSQPTAHLGWAKQTDSSNSV*THVLKQ Trigger: CTGTTTGAGAACATGGGTGCATACACTGTTGCTGCT...ATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCATGTTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACATGCAAGCGTGAAAGCTaGTGCGACATAGTATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: THVLKQHPITHMHFRQVTCKRES*CDIVSA Trigger: GGCAGATACTATGTCGCATCAGCTTTCACGCTTGCA...TGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAACATGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCACGATCCGATCAAGGCAAGAGCTACAAGAATaGCATCTACACATTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: QSPTCISGRLQRSTIRSRQELQE*HLHIDP Trigger: AGGATCAATGTGTAGATGCCATTCTTGTAGCTCTTG...CCTTGATCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTCCTCCACTCACCACATTGGCCGTGACATTACATAGTAGATGTTTGGCCCTTTGGAATCATCAGTaGCAATCCGTAGAACCAACT | + |
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Preference number: 2 (lower is better) Translates to: PAPPLTTLAVTLHSRCLALWNHQ*QSVEPT Trigger: AGTTGGTTCTACGGATTGCCACTGATGATTCCAAAG...GGCCAAACATCTACTATGTAATGTCACGGCCAATGTGGTGAGTGGAGGAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR CAA 90 bp | GTTTTGAGTGTGGCACCAAACTTAACACTGAGGCGACAGACAGCTTaGGAATCATCAGTGGCAATCCGTAGAACCAACTTTGCCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLSVAPNLTLRRQTA*ESSVAIRRTNFAFG Trigger: TCCAAAGGCAAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAGCTGTCTGTCGCCTCAGTGTTAAGTTTGGTGCCACACTCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTATGCAAGCGTGAAAGCTaGTGCGACATAGTATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: CIGANPTLTKTSQTSSKLCKRES*CDIVSA Trigger: GGCAGATACTATGTCGCATCAGCTTTCACGCTTGCA...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATTTGGTCCCCAGATGCTaGATGAGTAATACTTCTCGT | + |
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Preference number: 2 (lower is better) Translates to: HLLAFHTALVPTLLSQRHLVPRC*MSNTSR Trigger: ACGAGAAGTATTACTCATCCAGCATCTGGGGACCAA...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCCCTTTGGATGTGCTCTaGCGACTTTCATCAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: FSNSIQSPTCISGRLQRSPLDVL*RLSSIQ Trigger: TTGAATTGATGAAAGTCGCCAGAGCACATCCAAAGG...GGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATGGAAGCTCACACCAATaGCGTCAATATTTAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HLLAFHTALVPTLLSQRHGSSHQ*RQYLAL Trigger: AAGAGCTAAATATTGACGTCATTGGTGTGAGCTTCC...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCATGTTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACATCAAAAGTCATCATCTaGACTCCGTTACTGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: THVLKQHPITHMHFRQVTSKVII*TPLLAA Trigger: TGCTGCCAGTAACGGAGTCCAGATGATGACTTTTGA...TGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAACATGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTTTGGAATCATCAGTGGCAATCCGTAGAACCAACTTTGCCTTTGGATGTGAAGGTTTGTTCATTTaGCTCATCTTCATCGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TALESSVAIRRTNFAFGCEGLFI*LIFIVR Trigger: TCTGACGATGAAGATGAGTCAAATGAACAAACCTTC...ACATCCAAAGGCAAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAGCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| 3UTR GCA 72 bp | TCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTaGTCCTCCACCTCCGGCGGGAAGCCATGGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SWAQDMGSVPSS*SSTSGGKPWLW Trigger: CCAGAGCCATGGCTTCCCGCCGGAGGTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR CCA 72 bp | TCCTGCTCCTCCACCTCCGGCGGGAAGCCATGGCTCTaGATCTGCTTCATGAGTTGCCACATTGGCCGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SCSSTSGGKPWL*ICFMSCHIGRD Trigger: GTCACGGCCAATGTGGCAACTCATGAAGCAGATCCAGAGCCATGGCTTCCCGCCGGAGGTGGAGGAGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR GCA 72 bp | GCACAGCCTTGTGCCATCCACCTCTCCTCTGTGCTATaGGGGGCTAGCCCAACCTTCAGATCCACAGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: AQPCAIHLSSVL*GASPTFRSTGS Trigger: ACTGCCTGTGGATCTGAAGGTTGGGCTAGCCCCGCATAGCACAGAGGAGAGGTGGATGGCACAAGGCTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| 3UTR GCA 72 bp | AGAGGGCACAGCCTTGTGCCATCCACCTCTCCTCTGTaGTATGCGGGGCTAGCCCAACCTTCAGATCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: RGHSLVPSTSPL*YAGLAQPSDPQ Trigger: CTGTGGATCTGAAGGTTGGGCTAGCCCCGCATAGCACAGAGGAGAGGTGGATGGCACAAGGCTGTGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR GCA 72 bp | GCAAGGACTTCAGATGACCTCCCTAGGAAGTGGCCATaGCAACCGGTCACTAGGCAGGTGACATTCCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: ARTSDDLPRKWP*QPVTRQVTFLT Trigger: GGTGAGGAATGTCACCTGCCTAGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR CCA 72 bp | CTGCAGGCAAGGACTTCAGATGACCTCCCTAGGAAGTaGCCATGCCAACCGGTCACTAGGCAGGTGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: LQARTSDDLPRK*PCQPVTRQVTF Trigger: GAATGTCACCTGCCTAGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR TCA 72 bp | CCCAACCTTCAGATCCACAGGCAGTGGGTCTCTCCATaGCACAGCAGCCTGTGCAGATGTTGGTGCCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PNLQIHRQWVSP*HSSLCRCWCLL Trigger: AAGAAGGCACCAACATCTGCACAGGCTGCTGTGTCATGGAGAGACCCACTGCCTGTGGATCTGAAGGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTTTTTGGCAATGATGTaGACTGCAAGCGTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SIPLSWAQDMGSVPSSCSFLAMM*TASVKA Trigger: AGCTTTCACGCTTGCAGTCAACATCATTGCCAAAAA...GGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
||
| 3UTR CCA 72 bp | GGGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATaGGCTAAGCAGACTGATGCTGTACAGAGAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GQQSSQPTAHLG*AKQTDAVQRGH Trigger: GTGCCCTCTCTGTACAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGGTCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGAACTGTATTTCAGTCTaGCTTGCACAGTCAAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TVHPALLGTRHGQRAIILNCISV*LAQSNP Trigger: AGGATTTGACTGTGCAAGCAAGACTGAAATACAGTT...CAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
||
| 3UTR GCA 72 bp | GCACCCATGTTCTCAAACAGCATCCAATCACCCACATaGATTTCAGGCAGGTTACAGCGCTCCACGATCCGA | + |
|
Preference number: 3 (lower is better) Translates to: APMFSNSIQSPT*ISGRLQRSTIR Trigger: TCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAACATGGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
||
| 3UTR CCA 72 bp | GTCACTAGGCAGGTGACATTCCTCACCAACAGACTCTaGGCAACAAAGTTCTCAGCCAACTGCACACTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VTRQVTFLTNRL*ATKFSANCTLG Trigger: CCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCCAGAGTCTGTTGGTGAGGAATGTCACCTGCCTAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATGCTGTACTTCTCGTCTGGCTaGGGTCTCTTCTGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NKVLSQLHTWDGLSRLMLYFSSG*GLFCSR Trigger: CCTGCTGCAGAAGAGACCCAAGCCAGACGAGAAGTA...CAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATGCTGTCTGATGGGAAGTACTaGTCCAGAGCTGGGTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: NKVLSQLHTWDGLSRLMLSDGKY*SRAGLI Trigger: AATCAACCCAGCTCTGGACAAGTACTTCCCATCAGA...CAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCACGATCCTTTTTGGCAATGATGTaGACTGCAAGCGTGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TASNHPHAFQAGYSAPRSFLAMM*TASVKA Trigger: AGCTTTCACGCTTGCAGTCAACATCATTGCCAAAAA...GGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCAATGGCATCTACACATaGATCCTAGCAGAAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FSNSIQSPTCISGRLQRSNGIYT*ILAEAQ Trigger: CTGTGCTTCTGCTAGGATCAATGTGTAGATGCCATT...GGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221613.2 ENSMUST00000222617.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGAATCATCAGTGGCAATCCGTAGAACCAACTTTGCCTTTGGATGTGCTCTCTGATGGGAAGTACTaGTCCAGAGCTGGGTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: LWNHQWQSVEPTLPLDVLSDGKY*SRAGLI Trigger: AATCAACCCAGCTCTGGACAAGTACTTCCCATCAGA...GAGCACATCCAAAGGCAAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCAATATTTAGCTCTTTaGCCCGTTCCAAGAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLLAFHTALVPTLLSQRHQYLAL*PVPREA Trigger: GGCTTCTCTTGGAACGGGCAAAAGAGCTAAATATTG...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
||
| CDS-3UTR CCA 90 bp | CCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCTCCACCAAATCCTGTCCCAATaGCAGCTAGGGTGCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: PALLGTRHGQRAIILLLHQILSQ*QLGCSL Trigger: TAGTGAGCACCCTAGCTGCCATTGGGACAGGATTTG...GTGGAGGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| 3UTR CAA 72 bp | CTAAGCAGACTGATGCTGTACAGAGAGGGCACAGCCTaGTGCCATCCACCTCTCCTCTGTGCTATGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLMLYREGTA*CHPPLLCAMRG Trigger: GCCCCGCATAGCACAGAGGAGAGGTGGATGGCACAAGGCTGTGCCCTCTCTGTACAGCATCAGTCTGCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGGCGGGCATCCGACACTaGCTGAACGAAGGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKAGIRH*LNEGLR Trigger: CCTGAGACCTTCGTTCAGGCAGTGTCGGATGCCCGC...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR GCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGAGCAGAAGCACAGGCTaGAGGGTGACGGTCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKSRSTG*RVTVHP Trigger: GGGATGGACCGTCACCCTGCAGCCTGTGCTTCTGCT...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATGCGGGCATCCGACACTaGCTGAACGAAGGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQQSSQPTAHLGWAKQTDAGIRH*LNEGLR Trigger: CCTGAGACCTTCGTTCAGGCAGTGTCGGATGCCCGC...ATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGGACTTCAGATGACCTCCCTAGGAAGTGGCCATGCCAACCGGTCACTGTCCCGTGTACTCACTaGCATGTCAAACACACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QARTSDDLPRKWPCQPVTVPCTH*HVKHTA Trigger: CGCTGTGTGTTTGACATGGCAGTGAGTACACGGGAC...AGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGGCATCCGACACTGCCTaGACGAAGGTCTCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKASDTA*TKVSGS Trigger: TGATCCTGAGACCTTCGTTCAGGCAGTGTCGGATGC...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGCATCCACTGCCCACATaGAAGCTCACACCAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKHPLPT*KLTPMT Trigger: CGTCATTGGTGTGAGCTTCCATGTGGGCAGTGGATG...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGTGCAAGCGTGAAAGCTaGTGCGACATAGTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKCKRES*CDIVSA Trigger: GGCAGATACTATGTCGCATCAGCTTTCACGCTTGCA...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATGCTGTACGGCACCCCAAGCCCCTaGACCAACTGTATTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVLSQLHTWDGLSRLMLYGTPSP*TNCISV Trigger: GACTGAAATACAGTTGGTGCAGGGGCTTGGGGTGCC...GTACAGCATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR GCA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATGGCTTGGGTCTCTTCTaGAGCAGGGCCTTCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLAFHTALVPTLLSQRHGLGLF*SRAFTW Trigger: CCATGTGAAGGCCCTGCTGCAGAAGAGACCCAAGCC...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGCAAATCCTGTCCCAATaGCAGCTAGGGTGCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKQILSQ*QLGCSL Trigger: TAGTGAGCACCCTAGCTGCCATTGGGACAGGATTTG...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATCATCCACTGCCCACATaGAAGCTCACACCAATGACG | + |
|
Preference number: 4 (lower is better) Translates to: GQQSSQPTAHLGWAKQTDHPLPT*KLTPMT Trigger: CGTCATTGGTGTGAGCTTCCATGTGGGCAGTGGATG...ATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCGGGAAGCCATGGCTCTaGATCTGCTTCATGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAFHTALVPTLLSQRHPGKPWL*ICFMSC Trigger: GCAACTCATGAAGCAGATCCAGAGCCATGGCTTCCC...GGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR GCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGATCGTTACACTTGACTaGGTAAAAGGGAGTGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKIVTLD*VKGSDA Trigger: CGCGTCACTCCCTTTTACGCAGTCAAGTGTAACGAT...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGGACTTCAGATGACCTCCCTAGGAAGTGGCCATGCCAACCGGTCACTCCTTTGGATGTGCTCTaGCGACTTTCATCAATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QARTSDDLPRKWPCQPVTPLDVL*RLSSIQ Trigger: TTGAATTGATGAAAGTCGCCAGAGCACATCCAAAGG...AGTGACCGGTTGGCATGGCCACTTCCTAGGGAGGTCATCTGAAGTCCTTGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | GCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAAATGGTCCCCCTGGGCACAAGACATaGGCAGCGTGCCATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ANPTLTKTSQTSSKLNGPPGHKT*AACHHP Trigger: AGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGG...GGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR CCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTATCCATCCCGCTCTCCTaGGCACAAGACATGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CIGANPTLTKTSQTSSKLSIPLS*AQDMGS Trigger: GCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGA...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR GCA 90 bp | GCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAAATGGTCCCGGCACCCCAAGCCCCTaGACCAACTGTATTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ANPTLTKTSQTSSKLNGPGTPSP*TNCISV Trigger: GACTGAAATACAGTTGGTGCAGGGGCTTGGGGTGCC...GGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCGATCAGTACATCCACTaGCCACATGGAAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSNSIQSPTCISGRLQRSDQYIH*PHGSSH Trigger: GTGTGAGCTTCCATGTGGGCAGTGGATGTACTGATC...GGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCCCATGGCTCTGGATCTaGTTCATGAGTTGCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFHTALVPTLLSQRHPPWLWI*FMSCHI Trigger: AATGTGGCAACTCATGAAGCAGATCCAGAGCCATGG...GGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR GCA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATGATCAGTACATCCACTaGCCACATGGAAGCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HLLAFHTALVPTLLSQRHDQYIH*PHGSSH Trigger: GTGTGAGCTTCCATGTGGGCAGTGGATGTACTGATC...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGCCTTTGGATGTGCTCTaGCGACTTTCATCAATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PPSPSLPYCIGANPTLTKPLDVL*RLSSIQ Trigger: TTGAATTGATGAAAGTCGCCAGAGCACATCCAAAGG...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAACCAACTTTGCCTTTaGATGTGCTCTGGCGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFHTALVPTLLSQRHPNQLCL*MCSGDF Trigger: AAAGTCGCCAGAGCACATCCAAAGGCAAAGTTGGTT...GGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAACAAAGTTCTCAGCCAACTGCACACTTGGGATGGGCTAAGCAGACTGATAACCAACTTTGCCTTTaGATGTGCTCTGGCGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQQSSQPTAHLGWAKQTDNQLCL*MCSGDF Trigger: AAAGTCGCCAGAGCACATCCAAAGGCAAAGTTGGTT...ATCAGTCTGCTTAGCCCATCCCAAGTGTGCAGTTGGCTGAGAACTTTGTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
||
| CDS-3UTR CCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAACTTCTCGTCTGGCTTaGGTCTCTTCTGCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CIGANPTLTKTSQTSSKLTSRLA*VSSAAG Trigger: CCCTGCTGCAGAAGAGACCCAAGCCAGACGAGAAGT...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCTTGGTCCCCAGATGCTaGATGAGTAATACTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFHTALVPTLLSQRHPLVPRC*MSNTSR Trigger: ACGAGAAGTATTACTCATCCAGCATCTGGGGACCAA...GGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR TCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTCCCCAGATGCTGGATaGGTAATACTTCTCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKSPDAG*VILLVW Trigger: CCAGACGAGAAGTATTACTCATCCAGCATCTGGGGA...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCGCAGCATACTTGATTTaGGAGACTTGTTTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLAFHTALVPTLLSQRHPAAYLI*ETCLQG Trigger: TCCTTGTAAACAAGTCTCTCAAATCAAGTATGCTGC...GGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
||
| CDS-3UTR TCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGCAAGCAGATGCATGCTaGAACCAACTTCTGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKQADAC*NQLLLP Trigger: TGGCAACAGAAGTTGGTTTCAGCATGCATCTGCTTG...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
||
| CDS-3UTR GCA 90 bp | GTTCATTTGACTCATCTTCATCGTCAGAGCCGGGCTGCTCCTTCCACACGGTTTACTGTATTTCAGTCTTaGTTGCACAGTCAAATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHLTHLHRQSRAAPSTRFTVFQS*LHSQIL Trigger: CAGGATTTGACTGTGCAAGCAAGACTGAAATACAGT...AAACCGTGTGGAAGGAGCAGCCCGGCTCTGACGATGAAGATGAGTCAAATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| CDS-3UTR CCA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAATACTTCTCGTCTaGCTTGGGTCTCTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FHTALVPTLLSQRHPKLAVILLV*LGSLLQ Trigger: CTGCAGAAGAGACCCAAGCCAGACGAGAAGTATTAC...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| 3UTR CAA 72 bp | GTGGCACCAAACTTAACACTGAGGCGACAGACAGCTTaGGAATCATCAGTGGCAATCCGTAGAACCAACTTT | + |
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Preference number: 4 (lower is better) Translates to: VAPNLTLRRQTA*ESSVAIRRTNF Trigger: AAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAGCTGTCTGTCGCCTCAGTGTTAAGTTTGGTGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| CDS-3UTR GCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAATCGTTACACTTGACTaGGTAAAAGGGAGTGACGCG | + |
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Preference number: 4 (lower is better) Translates to: CIGANPTLTKTSQTSSKLIVTLD*VKGSDA Trigger: CGCGTCACTCCCTTTTACGCAGTCAAGTGTAACGAT...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR GCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGGAAACCAACTTCTGTTaGCATGTCAAACACACAGCG | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKETNFC*HVKHTA Trigger: CGCTGTGTGTTTGACATGGCAACAGAAGTTGGTTTC...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR GCA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAATCCAATCACCCACATaGATTTCAGGCAGGTTACAG | + |
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Preference number: 4 (lower is better) Translates to: FHTALVPTLLSQRHPKLAIQSPT*ISGRLQ Trigger: CTGTAACCTGCCTGAAATGCATGTGGGTGATTGGAT...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR GCA 90 bp | GCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAAATGGTCCCAGCAGCAACAGTGTATaGACCCATGTTCTCAAACAG | + |
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Preference number: 4 (lower is better) Translates to: ANPTLTKTSQTSSKLNGPSSNSV*THVLKQ Trigger: CTGTTTGAGAACATGGGTGCATACACTGTTGCTGCT...GGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGCCTTCATCAAGGATGTaGCAGTCAAACTCGTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKPSSRM*QSNSSL Trigger: TAAGGACGAGTTTGACTGCCACATCCTTGATGAAGG...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000222617.2 |
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| CDS-3UTR CCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTCAAAAGTCATCATCTaGACTCCGTTACTGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKSKVII*TPLLAA Trigger: TGCTGCCAGTAACGGAGTCCAGATGATGACTTTTGA...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR CCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGGACATAGTATCTGCCTaGCTCAGCTATGATTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKDIVSA*LSYDSH Trigger: GTGAGAATCATAGCTGAGCCAGGCAGATACTATGTC...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR TCA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATGCAGCATACTTGATTTaGGAGACTTGTTTACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: HLLAFHTALVPTLLSQRHAAYLI*ETCLQG Trigger: TCCTTGTAAACAAGTCTCTCAAATCAAGTATGCTGC...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR TCA 90 bp | GCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAAATGGTCCCGGAAGCTCACACCAATaGCGTCAATATTTAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ANPTLTKTSQTSSKLNGPGSSHQ*RQYLAL Trigger: AAGAGCTAAATATTGACGTCATTGGTGTGAGCTTCC...GGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR GCA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCATTTAGCCACCTCAGATaGTTCTTTAGAATGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FHTALVPTLLSQRHPKLAFSHLR*FFRMSP Trigger: CGGAGACATTCTAAAGAAGCATCTGAGGTGGCTAAA...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR GCA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAATGTTGGTCCCCAGATaGTGGATGAGTAATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: FHTALVPTLLSQRHPKLAMLVPR*WMSNTS Trigger: AGAAGTATTACTCATCCAGCATCTGGGGACCAACAT...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CCA 90 bp | ACAGCTTTGGAATCATCAGTGGCAATCCGTAGAACCAACTTTGCCTTTGGATGTCCTTCATCAAGGATGTaGCAGTCAAACTCGTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: TALESSVAIRRTNFAFGCPSSRM*QSNSSL Trigger: TAAGGACGAGTTTGACTGCCACATCCTTGATGAAGG...ACATCCAAAGGCAAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| CDS-3UTR CCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGCTTTGGAATCATCAGTaGCAATCCGTAGAACCAACT | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKLWNHQ*QSVEPT Trigger: AGTTGGTTCTACGGATTGCCACTGATGATTCCAAAG...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR CCA 90 bp | GCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAAATGGTCCCCTTTGGAATCATCAGTaGCAATCCGTAGAACCAACT | + |
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Preference number: 4 (lower is better) Translates to: ANPTLTKTSQTSSKLNGPLWNHQ*QSVEPT Trigger: AGTTGGTTCTACGGATTGCCACTGATGATTCCAAAG...GGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR TCA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAGGAAGCTCACACCAATaGCGTCAATATTTAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CIGANPTLTKTSQTSSKLGSSHQ*RQYLAL Trigger: AAGAGCTAAATATTGACGTCATTGGTGTGAGCTTCC...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR TCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGGAAGGTTTGTTCATTTaGCTCATCTTCATCGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKEGLFI*LIFIVR Trigger: TCTGACGATGAAGATGAGTCAAATGAACAAACCTTC...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR TCA 90 bp | CTTTGGAATCATCAGTGGCAATCCGTAGAACCAACTTTGCCTTTGGATGTGCTCTGCTATCGTTACACTTaGAGAGGAAGAGACTTCATT | + |
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Preference number: 4 (lower is better) Translates to: LWNHQWQSVEPTLPLDVLCYRYT*RGRDFI Trigger: AATGAAGTCTCTTCCTCTTCAAGTGTAACGATAGCA...GAGCACATCCAAAGGCAAAGTTGGTTCTACGGATTGCCACTGATGATTCCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| CDS-3UTR GCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGACTGTATTTCAGTCTTaGTTGCACAGTCAAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKTVFQS*LHSQIL Trigger: CAGGATTTGACTGTGCAAGCAAGACTGAAATACAGT...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR GCA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGCCAATATCAAGCAGATaGATGCTGAAACCAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: YCIGANPTLTKTSQTSSKPISSR*MLKPTS Trigger: AGAAGTTGGTTTCAGCATGCATCTGCTTGATATTGG...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CCA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCATACATAGTAGATGTTTaGCCTCTGGAACCCATTGAA | + |
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Preference number: 4 (lower is better) Translates to: FHTALVPTLLSQRHPKLAYIVDV*PLEPIE Trigger: TTCAATGGGTTCCAGAGGCCAAACATCTACTATGTA...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| 3UTR CAA 72 bp | GACTCCGTTACTGGCAGCATACTTGATTTGAGAGACTaGTTTACAAGGATTTGCATAGATAACCCTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: DSVTGSILDLRD*FTRICIDNPLC Trigger: GCAGAGAGGGTTATCTATGCAAATCCTTGTAAACAAGTCTCTCAAATCAAGTATGCTGCCAGTAACGGAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| CDS-3UTR CAA 90 bp | AGAAGCACAGGCTGCAGGGTGACGGTCCATCCCGCTCTCCTGGGCACAAGACATGAACCAACTTTGCCTTaGGATGTGCTCTGGCGACTT | + |
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Preference number: 5 (lower is better) Translates to: RSTGCRVTVHPALLGTRHEPTLP*DVLWRL Trigger: AAGTCGCCAGAGCACATCCAAAGGCAAAGTTGGTTC...ATGTCTTGTGCCCAGGAGAGCGGGATGGACCGTCACCCTGCAGCCTGTGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| CDS-3UTR CAA 90 bp | TCCATCCCGCTCTCCTGGGCACAAGACATGGGCAGCGTGCCATCATCCTGCTCCCAATATTTAGCTCTTTaGCCCGTTCCAAGAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: SIPLSWAQDMGSVPSSCSQYLAL*PVPREA Trigger: GGCTTCTCTTGGAACGGGCAAAAGAGCTAAATATTG...GGAGCAGGATGATGGCACGCTGCCCATGTCTTGTGCCCAGGAGAGCGGGATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| CDS-3UTR CAA 90 bp | CCCCCATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGTACTTCTCGTCTGGCTaGGGTCTCTTCTGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PPSPSLPYCIGANPTLTKYFSSG*GLFCSR Trigger: CCTGCTGCAGAAGAGACCCAAGCCAGACGAGAAGTA...CTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CAA 90 bp | CTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAGGCGACAGACAGCTTaGGAATCATCAGTGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: LLAFHTALVPTLLSQRHPRRQTA*ESSVAI Trigger: GATTGCCACTGATGATTCCAAAGCTGTCTGTCGCCT...GGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR CAA 90 bp | CAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCACGATCCGATCAAGGAACTGTATTTCAGTCTaGCTTGCACAGTCAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSPTCISGRLQRSTIRSRNCISV*LAQSNP Trigger: AGGATTTGACTGTGCAAGCAAGACTGAAATACAGTT...CCTTGATCGGATCGTGGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221613.2 |
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| CDS-3UTR CAA 90 bp | GCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTAAATGGTCCCGAACCAACTTTGCCTTaGGATGTGCTCTGGCGACTT | + |
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Preference number: 5 (lower is better) Translates to: ANPTLTKTSQTSSKLNGPEPTLP*DVLWRL Trigger: AAGTCGCCAGAGCACATCCAAAGGCAAAGTTGGTTC...GGGACCATTTAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR CAA 90 bp | TACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTCTGATGGGAAGTACTaGTCCAGAGCTGGGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: YCIGANPTLTKTSQTSSKSDGKY*SRAGLI Trigger: AATCAACCCAGCTCTGGACAAGTACTTCCCATCAGA...CTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CAA 90 bp | TTCTCAAACAGCATCCAATCACCCACATGCATTTCAGGCAGGTTACAGCGCTCCCTGCTATCGTTACACTaGAAGAGGAAGAGACTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSNSIQSPTCISGRLQRSLLSLH*KRKRLH Trigger: ATGAAGTCTCTTCCTCTTCAAGTGTAACGATAGCAG...GGAGCGCTGTAACCTGCCTGAAATGCATGTGGGTGATTGGATGCTGTTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222617.2 |
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| CDS-3UTR CAA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCACAATATTTAGCTCTTTaGCCCGTTCCAAGAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FHTALVPTLLSQRHPKLAQYLAL*PVPREA Trigger: GGCTTCTCTTGGAACGGGCAAAAGAGCTAAATATTG...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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| CDS-3UTR CAA 90 bp | TGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAGTAAGTTATTGTCCAGAGCTGGGTaGATTACACTGGTGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CIGANPTLTKTSQTSSKLLSRAG*ITLVIS Trigger: AGAGATCACCAGTGTAATCAACCCAGCTCTGGACAA...TAACTTACTGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CAA 90 bp | CATCTCCTAGCCTTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATTTTTTGGCAATGATGTaGACTGCAAGCGTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLLAFHTALVPTLLSQRHFLAMM*TASVKA Trigger: AGCTTTCACGCTTGCAGTCAACATCATTGCCAAAAA...ATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAAGGCTAGGAGATG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000171737.3 |
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| CDS-3UTR CAA 90 bp | TTCCATACTGCATTGGTGCCAACCCTACTCTCACAAAGACATCCCAAACTAGCAAACTGTATTTCAGTCTaGCTTGCACAGTCAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: FHTALVPTLLSQRHPKLANCISV*LAQSNP Trigger: AGGATTTGACTGTGCAAGCAAGACTGAAATACAGTT...TGCTAGTTTGGGATGTCTTTGTGAGAGTAGGGTTGGCACCAATGCAGTATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171737.3 ENSMUST00000221613.2 |
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