Pregenerated sensors for OCSTAMP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027670Ensembl transcript IDs: ENSMUST00000029213.5
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGACGTTGTGGGAAGGTCAGCTGGGTGCTCTCTCTGCCTCTCTaGGCTAGCTGGCGTTCACCACAGCCGCTGGCTCCTGAGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LGRCGKVSWVLSLPL*ASWRSPQPLAPESS Trigger: TGAAGACTCAGGAGCCAGCGGCTGTGGTGAACGCCAGCTAGCTCAGAGAGGCAGAGAGAGCACCCAGCTGACCTTCCCACAACGTCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 90 bp | GATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTaGCTTGCTCACCTTGCTTTCTTACAGAACCCAGGACCACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: DAEAMEGCSLLACFP*LAHLAFLQNPGPPA Trigger: GGCTGGTGGTCCTGGGTTCTGTAAGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 90 bp | TTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATaGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCACC | + |
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Preference number: 1 (lower is better) Translates to: LELKQVRKQELMQRP*RDVLYWLASPGLLT Trigger: GGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 90 bp | ATGATAACTCCAGCTTCTGTCAAGTTGACACACAAACCCAGCCAGTaGAGGGTCCATGGCCGTCATGAGGAAGAGCGTGGCAGCAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: MITPASVKLTHKPSQ*RVHGRHEEERGSKQ Trigger: CTGCTTGCTGCCACGCTCTTCCTCATGACGGCCATGGACCCTGCACTGGCTGGGTTTGTGTGTCAACTTGACAGAAGCTGGAGTTATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 90 bp | CATTTAAGACAGCATGGAGAAGGAGGCGACAGAGCCTTTCCTTTCTaGGACGTTGTGGGAAGGTCAGCTGGGTGCTCTCTCTGCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: HLRQHGEGGDRAFPF*DVVGRSAGCSLCLS Trigger: AGAGAGGCAGAGAGAGCACCCAGCTGACCTTCCCACAACGTCCCAGAAAGGAAAGGCTCTGTCGCCTCCTTCTCCATGCTGTCTTAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 90 bp | AGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTaGCTTGCTTCCCCTGGCTTGCTCACCTTGCTTTCTTACAGAACC | + |
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Preference number: 1 (lower is better) Translates to: RKQELMQRPWRDVLY*LASPGLLTLLSYRT Trigger: GGTTCTGTAAGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 90 bp | TTAGGGTCTATCTTAGTCAGGGCTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATTCAGCTTATA | + |
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Preference number: 1 (lower is better) Translates to: LGSILVRASIPAQTS*PRSKLGRKGFIQLI Trigger: TATAAGCTGAATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAGCCCTGACTAAGATAGACCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CAA 90 bp | CAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTaGCTCACCTTGCTTTCTTACAGAACCCAGGACCACCAGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QRPWRDVLYWLASPG*LTLLSYRTQDHQPR Trigger: CCTGGGCTGGTGGTCCTGGGTTCTGTAAGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCTCTGCTTTCCTCGCCCCGCCCTCTCCACGGAGCCAACCCCTTCCTGCACAAAGGCTTGTAAATTaGAGGAGTGCCGAGGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SFSAFLAPPSPRSQPLPAQRLVN*RSAEVN Trigger: ATTCACCTCGGCACTCCTCCAATTTACAAGCCTTTG...TGCAGGAAGGGGTTGGCTCCGTGGAGAGGGCGGGGCGAGGAAAGCAGAGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CAA 90 bp | TCAACGGAAGCTCCTTTCTCTATGATAACTCCAGCTTCTGTCAAGTaGACACACAAACCCAGCCAGTGCAGGGTCCATGGCCGTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: STEAPFSMITPASVK*THKPSQCRVHGRHE Trigger: CTCATGACGGCCATGGACCCTGCACTGGCTGGGTTTGTGTGTCAACTTGACAGAAGCTGGAGTTATCATAGAGAAAGGAGCTTCCGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR GCA 90 bp | AGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCGCTGGGTGCTCTCTCTaGCTCTCTGAGCTAGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RHNLKAKSYLEMLQGFDIAGCSL*LSELAG Trigger: GCCAGCTAGCTCAGAGAGGCAGAGAGAGCACCCAGC...GATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR TCA 90 bp | CACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCTCACTCTCTCTGCCTCTCTaGGCTAGCTGGCGTTCACCA | + |
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Preference number: 2 (lower is better) Translates to: HNLKAKSYLEMLQGFDISLSLPL*ASWRSP Trigger: TGGTGAACGCCAGCTAGCTCAGAGAGGCAGAGAGAG...TGAGATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CCA 90 bp | AGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCACTCATGGCCACACATaGGTAACCAGAGGCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RHNLKAKSYLEMLQGFDITHGHT*VTRGQA Trigger: AGCCTGGCCTCTGGTTACCCATGTGTGGCCATGAGT...GATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTCTCAAAGGCTTGTAAATTGGAGGAGTGCCGAGGTGAATCCACTTGCAGGTGTAGATTTGGAAACTaGAGCTCCGAGATGTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: EFSKACKLEECRGESTCRCRFGN*SSEMCN Trigger: GTTGCACATCTCGGAGCTTCAGTTTCCAAATCTACA...CCTGCAAGTGGATTCACCTCGGCACTCCTCCAATTTACAAGCCTTTGAGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTATGAGCACTAAACAAAGGTGTCTCTTCTCTGAAATTCAAAACTGGGCACGCGCACATTCCCCGTaGAAAGCAGATCACTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: RLMSTKQRCLFSEIQNWARAHSP*KADHCC Trigger: GCAACAGTGATCTGCTTTTCACGGGGAATGTGCGCG...TGCCCAGTTTTGAATTTCAGAGAAGAGACACCTTTGTTTAGTGCTCATAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR TCA 90 bp | ATGCCAGAGCTATATAAAGTCAACTCTAGGTCAAGAGGCAGAGCAAGCCACCAGAACAGAAGTCTGAGCTaGAGGGCATTTAAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: MPELYKVNSRSRGRASHQNRSLS*RAFKTA Trigger: TGCTGTCTTAAATGCCCTTCAGCTCAGACTTCTGTT...CTGGTGGCTTGCTCTGCCTCTTGACCTAGAGTTGACTTTATATAGCTCTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CCA 90 bp | CGGAGCCAACCCCTTCCTGCAGTCTTAAGAACACGTGACTCTGTTTTACCGAATACAACAATTTTACTCTaGAGGACTCATGGCCACACA | + |
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Preference number: 2 (lower is better) Translates to: RSQPLPAVLRTRDSVLPNTTILL*RTHGHT Trigger: TGTGTGGCCATGAGTCCTCCAGAGTAAAATTGTTGT...ATTCGGTAAAACAGAGTCACGTGTTCTTAAGACTGCAGGAAGGGGTTGGCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGACTGGCTTGCTTCCCCTaGCTTGCTCACCTTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GLFSLYFHTAVHHQRKSGLACFP*LAHLAF Trigger: GAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAG...TCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR GCA 90 bp | GGTTTATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGATTATGTTTCCTTCTCTaGTTTCCTCGCCCCGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GLFSLYFHTAVHHQRKSGLCFLL*FPRPAL Trigger: GAGGGCGGGGCGAGGAAAGCAGAGAAGGAAACATAA...TCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CCA 90 bp | TATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGATTGGAGAGCCTTTCCTTTCTaGGACGTTGTGGGAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: YSAYTSTLLFIIKGSQDWRAFPF*DVVGRS Trigger: TGACCTTCCCACAACGTCCCAGAAAGGAAAGGCTCT...CCAATCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR TCA 90 bp | TATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGATTGGGAGGGAACAGAAGTCTaGGCTGAAGGGCATTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: YSAYTSTLLFIIKGSQDWEGTEV*AEGHLR Trigger: TCTTAAATGCCCTTCAGCTCAGACTTCTGTTCCCTC...CCAATCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CCA 90 bp | ATGCCAGAGCTATATAAAGTCAACTCTAGGTCAAGAGGCAGAGCAAGCCACCAGTCTGAAATTCAAAACTaGGCAGGGCATCTTGTATTT | + |
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Preference number: 2 (lower is better) Translates to: MPELYKVNSRSRGRASHQSEIQN*AGHLVF Trigger: AAATACAAGATGCCCTGCCCAGTTTTGAATTTCAGA...CTGGTGGCTTGCTCTGCCTCTTGACCTAGAGTTGACTTTATATAGCTCTGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR GCA 90 bp | TATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGATTGGACTCAGAAATTCACCTaGGTCTGTCTCCCAAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: YSAYTSTLLFIIKGSQDWTQKFT*VCLPSV Trigger: AACACTTGGGAGACAGACGCAGGTGAATTTCTGAGT...CCAATCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR TCA 90 bp | TATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGATTGGAGTCTTAAGAACACGTaGCTCTGTTTTACCGAATGG | + |
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Preference number: 2 (lower is better) Translates to: YSAYTSTLLFIIKGSQDWSLKNT*LCFTEW Trigger: CCATTCGGTAAAACAGAGTCACGTGTTCTTAAGACT...CCAATCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CAA 90 bp | AACAAAGGTGTCTCTTCTCTGAAATTCAAAACTGGGCAGGGCATCTaGTATTTTTATTCACTAAACGTCAGAAGTCTAGATGGAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NKGVSSLKFKTGQGI*YFYSLNVRSLDGKA Trigger: GGCCTTTCCATCTAGACTTCTGACGTTTAGTGAATAAAAATACAAGATGCCCTGCCCAGTTTTGAATTTCAGAGAAGAGACACCTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | TGTGGGAAGGTCAGCTGGGTGCTCTCTCTGCCTCTCTaGGCTAGCTGGCGTTCACCACAGCCGCTGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: CGKVSWVLSLPL*ASWRSPQPLAP Trigger: AGGAGCCAGCGGCTGTGGTGAACGCCAGCTAGCTCAGAGAGGCAGAGAGAGCACCCAGCTGACCTTCCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 72 bp | TGGGACGTTGTGGGAAGGTCAGCTGGGTGCTCTCTCTaGCTCTCTGAGCTAGCTGGCGTTCACCACAGCCGC | + |
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Preference number: 3 (lower is better) Translates to: WDVVGRSAGCSL*LSELAGVHHSR Trigger: GCGGCTGTGGTGAACGCCAGCTAGCTCAGAGAGGCAGAGAGAGCACCCAGCTGACCTTCCCACAACGTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 72 bp | CAGCATGGAGAAGGAGGCGACAGAGCCTTTCCTTTCTaGGACGTTGTGGGAAGGTCAGCTGGGTGCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QHGEGGDRAFPF*DVVGRSAGCSL Trigger: GAGAGAGCACCCAGCTGACCTTCCCACAACGTCCCAGAAAGGAAAGGCTCTGTCGCCTCCTTCTCCATGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 72 bp | TTTCCTTTCTGGGACGTTGTGGGAAGGTCAGCTGGGTaGTCTCTCTGCCTCTCTGAGCTAGCTGGCGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: FPFWDVVGRSAG*SLCLSELAGVH Trigger: GTGAACGCCAGCTAGCTCAGAGAGGCAGAGAGAGCACCCAGCTGACCTTCCCACAACGTCCCAGAAAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 72 bp | TTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCACCTTaGTTTCTTACAGAACCCAGGACCACCAGCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: FFTGLLPLACSP*FLTEPRTTSPG Trigger: CCCTGGGCTGGTGGTCCTGGGTTCTGTAAGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | AAGCCACCAGCGGACAGAGGGAACAGAAGTCTGAGCTaGAGGGCATTTAAGACAGCATGGAGAAGGAGGCGA | + |
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Preference number: 3 (lower is better) Translates to: KPPADRGNRSLS*RAFKTAWRRRR Trigger: TCGCCTCCTTCTCCATGCTGTCTTAAATGCCCTTCAGCTCAGACTTCTGTTCCCTCTGTCCGCTGGTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | CACCCCCAATGGACCCACCCACCCTTGATCACTAACTaGGAAAATGCCTTACAGCTGGATCTCACGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: HPQWTHPPLITN*ENALQLDLTEA Trigger: TGCCTCCGTGAGATCCAGCTGTAAGGCATTTTCTCAGTTAGTGATCAAGGGTGGGTGGGTCCATTGGGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | CAGGATTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTaGTGCAGAGGCCATGGAGGGATGTTCTTTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: QDWNSSRSGSRS*CRGHGGMFFTG Trigger: GCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 72 bp | GAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTaGCTTGCTTCCCCTGGCTTGCTCACCTTGCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ELMQRPWRDVLY*LASPGLLTLLS Trigger: AGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCTCTGCATCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | AGGGATAGCACCACCCCCAATGGACCCACCCACCCTTaGTCACTAACTGAGAAAATGCCTTACAGCTGGATC | + |
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Preference number: 3 (lower is better) Translates to: RDSTTPNGPTHP*SLTEKMPYSWI Trigger: GATCCAGCTGTAAGGCATTTTCTCAGTTAGTGATCAAGGGTGGGTGGGTCCATTGGGGGTGGTGCTATCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATTCACCTaGGTCTGTCTCCCAAGTGTTGGTATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKFT*VCLPSVGIKGV Trigger: CACACCTTTAATACCAACACTTGGGAGACAGACGCAGGTGAATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | GAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTaGTATCTCAAAGGCCACTCCCAGCAACACATCTCC | + |
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Preference number: 3 (lower is better) Translates to: EGKKLPGNAARL*YLKGHSQQHIS Trigger: GGAGATGTGTTGCTGGGAGTGGCCTTTGAGATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | TCATGGCCACACATGGGTAACCAGAGGCCAGGCTTATaGGCACTAAACAAAGGTGTCTCTTCTCTGAAATTC | + |
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Preference number: 3 (lower is better) Translates to: SWPHMGNQRPGL*ALNKGVSSLKF Trigger: GAATTTCAGAGAAGAGACACCTTTGTTTAGTGCTCATAAGCCTGGCCTCTGGTTACCCATGTGTGGCCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 72 bp | AGGGTTAGGGTCTATCTTAGTCAGGGCTTCTATTCCTaGACAAACATCATGACCAAGAAGCAAGTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: RVRVYLSQGFYS*TNIMTKKQVGE Trigger: CTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAGCCCTGACTAAGATAGACCCTAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CCA 72 bp | TTGCAGATTAACGTGAATTCTCAAAGGCTTGTAAATTaGAGGAGTGCCGAGGTGAATCCACTTGCAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LQINVNSQRLVN*RSAEVNPLAGS Trigger: AGACCCTGCAAGTGGATTCACCTCGGCACTCCTCCAATTTACAAGCCTTTGAGAATTCACGTTAATCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CAA 90 bp | AGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCAAAAGCAGATCACTGTaGCCACGCCCAATTATTATG | + |
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Preference number: 3 (lower is better) Translates to: RHNLKAKSYLEMLQGFDIKSRSL*PRPIIM Trigger: CATAATAATTGGGCGTGGCAACAGTGATCTGCTTTT...GATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR TCA 72 bp | ATCTTAGTCAGGGCTTCTATTCCTGCACAAACATCATaGCCAAGAAGCAAGTTGGGGAGGAAAGGGTTTATT | + |
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Preference number: 3 (lower is better) Translates to: ILVRASIPAQTS*PRSKLGRKGFI Trigger: AATAAACCCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAGCCCTGACTAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR GCA 72 bp | GGGAGGAAAGGGTTTATTCAGCTTATACTTCCACACTaGTGTTCATCATCAAAGGAAGTCAGGATTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: GRKGFIQLILPH*CSSSKEVRIGT Trigger: AGTTCCAATCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATAAACCCTTTCCTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR-3UTR CAA 90 bp | GGTTTATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGAACTGGGCAGGGCATCTaGTATTTTTATTCACTAAAC | + |
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Preference number: 3 (lower is better) Translates to: GLFSLYFHTAVHHQRKSGTGQGI*YFYSLN Trigger: GTTTAGTGAATAAAAATACAAGATGCCCTGCCCAGT...TCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGTCTAGCGGAAAGGGACTGGGCGGTCTGGTCCTCCCAAACGTCCAGTTATGTGTGGCACCAGCCTaGGCCAGCTGCCGAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLSSGKGLGGLVLPNVQLCVAPA*ASCRTS Trigger: GCTGGTTCGGCAGCTGGCCCAGGCTGGTGCCACACA...TAACTGGACGTTTGGGAGGACCAGACCGCCCAGTCCCTTTCCGCTAGACAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CCA 90 bp | TCCTTCTCTGCTTTCCTCGCCCCGCCCTCTCCACGGAGCCAACCCCTTCCTGCAAGGTCAGCAGATGTGTaGCACCAGCCTGGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SFSAFLAPPSPRSQPLPARSADV*HQPGPA Trigger: AGCTGGCCCAGGCTGGTGCCACACATCTGCTGACCT...TGCAGGAAGGGGTTGGCTCCGTGGAGAGGGCGGGGCGAGGAAAGCAGAGAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR GCA 90 bp | GGGCTGTCTAGCGGAAAGGGACTGGGCGGTCTGGTCCTCCCAAACGTCCAGTTACCGCTGAGTGCCCAGTaGTGCTCGAGCCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: GLSSGKGLGGLVLPNVQLPLSAQ*CSSQEL Trigger: GAGTTCCTGGCTCGAGCAGCACTGGGCACTCAGCGG...TAACTGGACGTTTGGGAGGACCAGACCGCCCAGTCCCTTTCCGCTAGACAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| 3UTR CAA 72 bp | GAGAAGGAGGCGACAGAGCCTTTCCTTTCTGGGACGTaGTGGGAAGGTCAGCTGGGTGCTCTCTCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: EKEATEPFLSGT*WEGQLGALSAS Trigger: AGAGGCAGAGAGAGCACCCAGCTGACCTTCCCACAACGTCCCAGAAAGGAAAGGCTCTGTCGCCTCCTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR GCA 90 bp | CATTTAAGACAGCATGGAGAAGGAGGCGACAGAGCCTTTCCTTTCTGGGACGTTTGGGAAGAAGGAGGCTaGGATGGTGTGGCGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HLRQHGEGGDRAFPFWDVWEEGG*DGVAQA Trigger: CGCCTGCGCCACACCATCGCAGCCTCCTTCTTCCCA...AACGTCCCAGAAAGGAAAGGCTCTGTCGCCTCCTTCTCCATGCTGTCTTAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| 3UTR CAA 72 bp | GTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTCACCTaGCTTTCTTACAGAACCCAGGACCACCAGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYWLASPGLLT*LSYRTQDHQPR Trigger: CCTGGGCTGGTGGTCCTGGGTTCTGTAAGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR TCA 90 bp | CATTTAAGACAGCATGGAGAAGGAGGCGACAGAGCCTTTCCTTTCTGGGACGTTTGCCTGAGGTCCCTGTaGCTCCAGAGTCCGAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLRQHGEGGDRAFPFWDVCLRSL*LQSPSS Trigger: GGAACTCGGACTCTGGAGTCACAGGGACCTCAGGCA...AACGTCCCAGAAAGGAAAGGCTCTGTCGCCTCCTTCTCCATGCTGTCTTAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | GAATTCTCAAAGGCTTGTAAATTGGAGGAGTGCCGAGGTGAATCCACTTGCAGGGCCCAGTTCCCTGGCTaGCTGGCGCAGCTGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EFSKACKLEECRGESTCRAQFPG*LAQLVS Trigger: ACTTACCAGCTGCGCCAGGCAGCCAGGGAACTGGGC...CCTGCAAGTGGATTCACCTCGGCACTCCTCCAATTTACAAGCCTTTGAGAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | AGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCCTGGGCCCAGTTCCCTaGCTGCCTGGCGCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RHNLKAKSYLEMLQGFDILGPVP*LPGAAG Trigger: ACCAGCTGCGCCAGGCAGCCAGGGAACTGGGCCCAG...GATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | ATGAGCACTAAACAAAGGTGTCTCTTCTCTGAAATTCAAAACTGGGCAGGGCATGGCTGCCTGCTCGGCTaGCTGGGCCCAGTTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSTKQRCLFSEIQNWAGHGCLLG*LGPVPW Trigger: CCAGGGAACTGGGCCCAGCCAGCCGAGCAGGCAGCC...ATGCCCTGCCCAGTTTTGAATTTCAGAGAAGAGACACCTTTGTTTAGTGCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| 3UTR CAA 72 bp | AGGAGTGCCGAGGTGAATCCACTTGCAGGGTCTCCATaGAGGATGTTATCAGGGCTGTCTAGCGGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSAEVNPLAGSP*RMLSGLSSGKG Trigger: TCCCTTTCCGCTAGACAGCCCTGATAACATCCTCAATGGAGACCCTGCAAGTGGATTCACCTCGGCACTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | ATGAGCACTAAACAAAGGTGTCTCTTCTCTGAAATTCAAAACTGGGCAGGGCATATGTCAGGCTGCGGCTaGCTGCTCGGCTGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MSTKQRCLFSEIQNWAGHMSGCG*LLGWLG Trigger: GCCCAGCCAGCCGAGCAGGCAGCCGCAGCCTGACAT...ATGCCCTGCCCAGTTTTGAATTTCAGAGAAGAGACACCTTTGTTTAGTGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | ATGAGCACTAAACAAAGGTGTCTCTTCTCTGAAATTCAAAACTGGGCAGGGCATAGCGGCGGCCCTGCTTaGAGCCCAGGGTTGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MSTKQRCLFSEIQNWAGHSGGPA*SPGLAH Trigger: GTGTGCCAACCCTGGGCTCCAAGCAGGGCCGCCGCT...ATGCCCTGCCCAGTTTTGAATTTCAGAGAAGAGACACCTTTGTTTAGTGCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | AGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCAGAAGGAGGCTGCGATaGTGTGGCGCAGGCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHNLKAKSYLEMLQGFDIRRRLR*CGAGAR Trigger: CCTGGCGCCTGCGCCACACCATCGCAGCCTCCTTCT...GATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | GAATTCTCAAAGGCTTGTAAATTGGAGGAGTGCCGAGGTGAATCCACTTGCAGGAGCCTCCTGGCCTCCTaGTCTGGGAAGAAGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFSKACKLEECRGESTCRSLLAS*SGKKEA Trigger: AGCCTCCTTCTTCCCAGACCAGGAGGCCAGGAGGCT...CCTGCAAGTGGATTCACCTCGGCACTCCTCCAATTTACAAGCCTTTGAGAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| 3UTR CAA 72 bp | TGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTaGCTCACCTTGCTTTCTTACAGAACCCAGGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: WRDVLYWLASPG*LTLLSYRTQDH Trigger: GTGGTCCTGGGTTCTGTAAGAAAGCAAGGTGAGCAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | AGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCCCTCAAATGTCAGGCTaGGGCTGCCTGCTCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHNLKAKSYLEMLQGFDIPQMSG*GCLLGW Trigger: CCAGCCGAGCAGGCAGCCGCAGCCTGACATTTGAGG...GATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGGGTATTTGATCGCATTGTGAACCTGGAGATTATGAACTGTAAACATCTGGCAGGAACAACCCGGTaGCCACCCGCTGAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRVFDRIVNLEIMNCKHLAGTTR*PPAECP Trigger: TGGGCACTCAGCGGGTGGTCACCGGGTTGTTCCTGC...CAGATGTTTACAGTTCATAATCTCCAGGTTCACAATGCGATCAAATACCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| 3UTR CAA 72 bp | GCTCCTTTCTCTATGATAACTCCAGCTTCTGTCAAGTaGACACACAAACCCAGCCAGTGCAGGGTCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: APFSMITPASVK*THKPSQCRVHG Trigger: GCCATGGACCCTGCACTGGCTGGGTTTGTGTGTCAACTTGACAGAAGCTGGAGTTATCATAGAGAAAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | CACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCTCACACTGGAAGGAGCGCTaGATGGAGGCAAACACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HNLKAKSYLEMLQGFDISHWKER*MEANTL Trigger: GAGCGTGTTTGCCTCCATGCAGCGCTCCTTCCAGTG...TGAGATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR TCA 90 bp | TTTTATTCACTAAACGTCAGAAGTCTAGATGGAAAGGCCCCAAAGGAGCAGGAAAGGGAGTCATGTGCCTaGGGTCCCTGTGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FYSLNVRSLDGKAPKEQERESCA*GPCDSR Trigger: TCTGGAGTCACAGGGACCTCAGGCACATGACTCCCT...TTCCTGCTCCTTTGGGGCCTTTCCATCTAGACTTCTGACGTTTAGTGAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | CACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCTCAGTGGAACAACTGCCTTaGAGATCCCCAAGCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLKAKSYLEMLQGFDISVEQLP*RSPSAR Trigger: TCTGGCGCTTGGGGATCTGCAAGGCAGTTGTTCCAC...TGAGATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | AGAACTCACATCTCAAGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGGCTTTCCAGGCAGCCTaGAGTGGAACAACTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTHISRHNLKAKSYLEMLAFQAA*SGTTAL Trigger: CAAGGCAGTTGTTCCACTGCAGGCTGCCTGGAAAGC...CAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCTTGAGATGTGAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | CACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGCAAGGCTTTGATATCTCAGTAGTTCGTTACAGCTaGCTGGGACAGGCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNLKAKSYLEMLQGFDISVVRYS*LGQAGR Trigger: TCTCCCAGCCTGTCCCAGCCAGCTGTAACGAACTAC...TGAGATATCAAAGCCTTGCAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR TCA 90 bp | TGCAGGGTATTTGATCGCATTGTGAACCTGGAGATTATGAACTGTAAACATCTGGAAGGCCCCATAGTCTaGGGCCACTGTCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CRVFDRIVNLEIMNCKHLEGPIV*GHCHSC Trigger: ACAGCTGTGACAGTGGCCTCAGACTATGGGGCCTTC...CAGATGTTTACAGTTCATAATCTCCAGGTTCACAATGCGATCAAATACCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCACTAAACGTCAGAAGTCTAGATGGAAAGGCCCCAAAGGAGCAGGAAGACAGCCAGGTTGGCTaGACTGTAGGACAGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FYSLNVRSLDGKAPKEQEDSQVG*TVGQEQ Trigger: TTGCTCCTGTCCTACAGTGCAGCCAACCTGGCTGTC...TTCCTGCTCCTTTGGGGCCTTTCCATCTAGACTTCTGACGTTTAGTGAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | GGTTTATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGAGGAAGGCTGAGCCCTTaGCCTCGACCTCAAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLYFHTAVHHQRKSGGRLSP*PRPQMS Trigger: TGACATTTGAGGTCGAGGGCAAGGGCTCAGCCTTCC...TCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR GCA 90 bp | TTTAAAACAACAATTTTACTCTGGAGGACTCATGGCCACACATGGGTAACCAGAGGCTACAGCTGCTTGTaGCAAGAGGAAGGCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: FKTTILLWRTHGHTWVTRGYSCL*QEEGPI Trigger: TATGGGGCCTTCCTCTTGGCACAAGCAGCTGTAGCC...TCTGGTTACCCATGTGTGGCCATGAGTCCTCCAGAGTAAAATTGTTGTTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | TTTTATTCACTAAACGTCAGAAGTCTAGATGGAAAGGCCCCAAAGGAGCAGGAACCACTGTCACAGCTGTaGCTACTAAGAGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYSLNVRSLDGKAPKEQEPLSQL*LLRAMP Trigger: TGGCATTGCTCTTAGTAGCCACAGCTGTGACAGTGG...TTCCTGCTCCTTTGGGGCCTTTCCATCTAGACTTCTGACGTTTAGTGAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CCA 90 bp | GGTTTATTCAGCTTATACTTCCACACTGCTGTTCATCATCAAAGGAAGTCAGGATTCAGGTGGTCACTCTaGTTGTGTCTCCTCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFSLYFHTAVHHQRKSGFRWSL*LCLLWS Trigger: GCTCCAGAGGAGACACAACCAGAGTGACCACCTGAA...TCCTGACTTCCTTTGATGATGAACAGCAGTGTGGAAGTATAAGCTGAATAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| 3UTR CAA 72 bp | GTCTCTTCTCTGAAATTCAAAACTGGGCAGGGCATCTaGTATTTTTATTCACTAAACGTCAGAAGTCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSLKFKTGQGI*YFYSLNVRSLD Trigger: ATCTAGACTTCTGACGTTTAGTGAATAAAAATACAAGATGCCCTGCCCAGTTTTGAATTTCAGAGAAGAGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | CGATGGTGTGGCGCAGGCGCCAGGCGTAGGCCTGTAGCACCAAGGTaGCGCCCGCCAGCAGTTGCAGGGCGCCCGCCGCCAGAGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RWCGAGARRRPVAPR*RPPAVAGRPPPEQR Trigger: CCGCTGCTCTGGCGGCGGGCGCCCTGCAACTGCTGGCGGGCGCCACCTTGGTGCTACAGGCCTACGCCTGGCGCCTGCGCCACACCATCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS TCA 90 bp | TGGCGCCCGCCAGCAGTTGCAGGGCGCCCGCCGCCAGAGCAGCGGTaGCACGGGGTGGTTGAGCCTGTGGTAGATGACAGTCGTGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WRPPAVAGRPPPEQR*HGVVEPVVDDSRGA Trigger: CGCCCCACGACTGTCATCTACCACAGGCTCAACCACCCCGTGTCACCGCTGCTCTGGCGGCGGGCGCCCTGCAACTGCTGGCGGGCGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS GCA 90 bp | GGAAGGCTGAGCCCTTGCCCTCGACCTCAAATGTCAGGCTGCGGCTaGCTGCTCGGCTGGCTGGGCCCAGTTCCCTGGCTGCCTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRLSPCPRPQMSGCG*LLGWLGPVPWLPGA Trigger: TGCGCCAGGCAGCCAGGGAACTGGGCCCAGCCAGCCGAGCAGGCAGCCGCAGCCTGACATTTGAGGTCGAGGGCAAGGGCTCAGCCTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS GCA 90 bp | GAAGGCGGAAGGCTGAGCCCTTGCCCTCGACCTCAAATGTCAGGCTaGGGCTGCCTGCTCGGCTGGCTGGGCCCAGTTCCCTGGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EGGRLSPCPRPQMSG*GCLLGWLGPVPWLP Trigger: AGGCAGCCAGGGAACTGGGCCCAGCCAGCCGAGCAGGCAGCCGCAGCCTGACATTTGAGGTCGAGGGCAAGGGCTCAGCCTTCCGCCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS TCA 90 bp | GGTACCAGGCCGACTCTCCCAGGAGGCCCAGCAGGAACAACCCGGTaGCCACCCGCTGAGTGCCCAGTGCTGCTCGAGCCAGGAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTRPTLPGGPAGTTR*PPAECPVLLEPGTP Trigger: TGGAGTTCCTGGCTCGAGCAGCACTGGGCACTCAGCGGGTGGTCACCGGGTTGTTCCTGCTGGGCCTCCTGGGAGAGTCGGCCTGGTACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS TCA 90 bp | GACTCTCCCAGGAGGCCCAGCAGGAACAACCCGGTGACCACCCGCTaGGTGCCCAGTGCTGCTCGAGCCAGGAACTCCAGGCCAGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSPRRPSRNNPVTTR*VPSAARARNSRPEK Trigger: CTTCTCTGGCCTGGAGTTCCTGGCTCGAGCAGCACTGGGCACTCAGCGGGTGGTCACCGGGTTGTTCCTGCTGGGCCTCCTGGGAGAGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS GCA 90 bp | CAGGCTGCGGCTGCCTGCTCGGCTGGCTGGGCCCAGTTCCCTGGCTaGCTGGCGCAGCTGGTAAGTGGTATTAAGCAGACTCTCCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QAAAACSAGWAQFPG*LAQLVSGIKQTLQR Trigger: TCTTTGGAGAGTCTGCTTAATACCACTTACCAGCTGCGCCAGGCAGCCAGGGAACTGGGCCCAGCCAGCCGAGCAGGCAGCCGCAGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS GCA 90 bp | GCCCAGCAGGAACAACCCGGTGACCACCCGCTGAGTGCCCAGTGCTaGTCGAGCCAGGAACTCCAGGCCAGAGAAGTCTTCCAGGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQQEQPGDHPLSAQC*SSQELQAREVFQDL Trigger: GAGATCCTGGAAGACTTCTCTGGCCTGGAGTTCCTGGCTCGAGCAGCACTGGGCACTCAGCGGGTGGTCACCGGGTTGTTCCTGCTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | CACGCACATTGCCTAAGACGTTTGGCACCACAGCGACAGCCAGGTTaGCTGCACTGTAGGACAGGAGCAAGCGGCGGCCCTGCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HAHCLRRLAPQRQPG*LHCRTGASGGPAWS Trigger: GCTCCAAGCAGGGCCGCCGCTTGCTCCTGTCCTACAGTGCAGCCAACCTGGCTGTCGCTGTGGTGCCAAACGTCTTAGGCAATGTGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | GTGCCGGGCTGTTTGTTCAGGTGGTCACTCTGGTTGTGTCTCCTCTaGAGCCGGGCCTGCAAGTGGCTAAGCCTCCTGGCCTCCTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPGCLFRWSLWLCLL*SRACKWLSLLASWS Trigger: AGACCAGGAGGCCAGGAGGCTTAGCCACTTGCAGGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | TCCCGGGTGGCCATAGTGCCGGGCTGTTTGTTCAGGTGGTCACTCTaGTTGTGTCTCCTCTGGAGCCGGGCCTGCAAGTGGCTAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRVAIVPGCLFRWSL*LCLLWSRACKWLSL Trigger: GAGGCTTAGCCACTTGCAGGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCACTATGGCCACCCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | AGACAGCTCAGCAGCTCCTCCCGTGACAACTTAGGCTGGGCTGTTTaGAGCAGCCACGGAGGCGGAGAGGTCAGCAGATGTGTGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RQLSSSSRDNLGWAV*SSHGGGEVSRCVAP Trigger: TGGTGCCACACATCTGCTGACCTCTCCGCCTCCGTGGCTGCTCCAAACAGCCCAGCCTAAGTTGTCACGGGAGGAGCTGCTGAGCTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | TTCCTGGATTCCCGGGTGGCCATAGTGCCGGGCTGTTTGTTCAGGTaGTCACTCTGGTTGTGTCTCCTCTGGAGCCGGGCCTGCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLDSRVAIVPGCLFR*SLWLCLLWSRACKW Trigger: CCACTTGCAGGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCACTATGGCCACCCGGGAATCCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTCTGCTTTCCTCGCCCCGCCCTCTCCACGGAGCCAACCCCTTCCTGCAATAGTGCCGGGCTGTTaGTTCAGGTGGTCACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFSAFLAPPSPRSQPLPAIVPGC*FRWSLW Trigger: CCAGAGTGACCACCTGAACAAACAGCCCGGCACTAT...TGCAGGAAGGGGTTGGCTCCGTGGAGAGGGCGGGGCGAGGAAAGCAGAGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS TCA 90 bp | TTCCAGGATCTCCTGAGTGATCGTGTGCATGTGAAGGCGGAAGGCTaGGCCCTTGCCCTCGACCTCAAATGTCAGGCTGCGGCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FQDLLSDRVHVKAEG*ALALDLKCQAAAAC Trigger: GCAGGCAGCCGCAGCCTGACATTTGAGGTCGAGGGCAAGGGCTCAGCCTTCCGCCTTCACATGCACACGATCACTCAGGAGATCCTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | AGCCTTAGGAGACAGCTCAGCAGCTCCTCCCGTGACAACTTAGGCTaGGCTGTTTGGAGCAGCCACGGAGGCGGAGAGGTCAGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRRQLSSSSRDNLG*AVWSSHGGGEVSRC Trigger: ACATCTGCTGACCTCTCCGCCTCCGTGGCTGCTCCAAACAGCCCAGCCTAAGTTGTCACGGGAGGAGCTGCTGAGCTGTCTCCTAAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS TCA 90 bp | GAGCCAGGAACTCCAGGCCAGAGAAGTCTTCCAGGATCTCCTGAGTaGTCGTGTGCATGTGAAGGCGGAAGGCTGAGCCCTTGCCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: EPGTPGQRSLPGSPE*SCACEGGRLSPCPR Trigger: TCGAGGGCAAGGGCTCAGCCTTCCGCCTTCACATGCACACGATCACTCAGGAGATCCTGGAAGACTTCTCTGGCCTGGAGTTCCTGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS TCA 90 bp | GAACCAGCTGCCGAGTCGCGTAGATATTGTCGAAACGCAGGTCAGTaGGGTAGCGATGAAGGTACCAGGCCGACTCTCCCAGGAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPAAESRRYCRNAGQ*GSDEGTRPTLPGGP Trigger: TGGGCCTCCTGGGAGAGTCGGCCTGGTACCTTCATCGCTACCTCACTGACCTGCGTTTCGACAATATCTACGCGACTCGGCAGCTGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | GCCAGGCCTGCGATAAGACTGGCCAAGGAAACACACAGGAGAAGCTaGGTCAGTAGTTCGTTACAGCTGGCTGGGACAGGCTGGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARPAIRLAKETHRRS*VSSSLQLAGTGWEK Trigger: CTTCTCCCAGCCTGTCCCAGCCAGCTGTAACGAACTACTGACCCAGCTTCTCCTGTGTGTTTCCTTGGCCAGTCTTATCGCAGGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
||
| CDS CCA 90 bp | GTGCCAAGAGGAAGGCCCCATAGTCTGAGGCCACTGTCACAGCTGTaGCTACTAAGAGCAATGCCAGTAGCCCCAGCCTTAGGAGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPRGRPHSLRPLSQL*LLRAMPVAPALGDS Trigger: GCTGTCTCCTAAGGCTGGGGCTACTGGCATTGCTCTTAGTAGCCACAGCTGTGACAGTGGCCTCAGACTATGGGGCCTTCCTCTTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CAA 90 bp | ATGCCAGAGCTATATAAAGTCAACTCTAGGTCAAGAGGCAGAGCAAGCCACCAGCTTAGGCTGGGCTGTTaGGAGCAGCCACGGAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: MPELYKVNSRSRGRASHQLRLGC*EQPRRR Trigger: CCGCCTCCGTGGCTGCTCCAAACAGCCCAGCCTAAG...CTGGTGGCTTGCTCTGCCTCTTGACCTAGAGTTGACTTTATATAGCTCTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 90 bp | CAAAGGATAAAGCTGCAAAGAGACCAGCCAGTGATGCGCCAGGCCTaGGATAAGACTGGCCAAGGAAACACACAGGAGAAGCTGGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: QRIKLQRDQPVMRQA*DKTGQGNTQEKLGQ Trigger: CTGACCCAGCTTCTCCTGTGTGTTTCCTTGGCCAGTCTTATCGCAGGCCTGGCGCATCACTGGCTGGTCTCTTTGCAGCTTTATCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 90 bp | TTAAGCAGACTCTCCAAAGAGCCCTCAGTAACACAGCTCAGCACTTaGCCAGCTGCACGCACATTGCCTAAGACGTTTGGCACCACAGCG | + |
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Preference number: 5 (lower is better) Translates to: LSRLSKEPSVTQLST*PAARTLPKTFGTTA Trigger: CGCTGTGGTGCCAAACGTCTTAGGCAATGTGCGTGCAGCTGGGCAAGTGCTGAGCTGTGTTACTGAGGGCTCTTTGGAGAGTCTGCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CAA 90 bp | CGGAGCCAACCCCTTCCTGCAGTCTTAAGAACACGTGACTCTGTTTTACCGAATCGGAAGGCTGAGCCCTaGCCCTCGACCTCAAATGTC | + |
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Preference number: 5 (lower is better) Translates to: RSQPLPAVLRTRDSVLPNRKAEP*PSTSNV Trigger: GACATTTGAGGTCGAGGGCAAGGGCTCAGCCTTCCG...ATTCGGTAAAACAGAGTCACGTGTTCTTAAGACTGCAGGAAGGGGTTGGCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CAA 90 bp | AGAACTCACATCTCAAGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGAGGTGGTCACTCTGGTaGTGTCTCCTCTGGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RTHISRHNLKAKSYLEMLRWSLW*CLLWSR Trigger: CCGGCTCCAGAGGAGACACAACCAGAGTGACCACCT...CAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCTTGAGATGTGAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CAA 90 bp | AGAACTCACATCTCAAGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGGCTCTCCACCGGAGGTaGGTTGAGGACGAAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: RTHISRHNLKAKSYLEMLALHRR*VEDEED Trigger: ATCCTCTTCGTCCTCAACCAACCTCCGGTGGAGAGC...CAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCTTGAGATGTGAGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS-3UTR CAA 90 bp | AGAACTCACATCTCAAGACACAACCTGAAGGCAAAAAGCTACCTGGAAATGCTGTATGAGGCGTCATATTaGACTGTGAGTGTGATTGGG | + |
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Preference number: 5 (lower is better) Translates to: RTHISRHNLKAKSYLEMLYEASY*TVSVIG Trigger: CCCAATCACACTCACAGTCAAATATGACGCCTCATA...CAGCATTTCCAGGTAGCTTTTTGCCTTCAGGTTGTGTCTTGAGATGTGAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | CCGACTCTCCCAGGAGGCCCAGCAGGAACAACCCGGTaGCCACCCGCTGAGTGCCCAGTGCTGCTCGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: PTLPGGPAGTTR*PPAECPVLLEP Trigger: TGGCTCGAGCAGCACTGGGCACTCAGCGGGTGGTCACCGGGTTGTTCCTGCTGGGCCTCCTGGGAGAGTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | AGCCCTTGCCCTCGACCTCAAATGTCAGGCTGCGGCTaGCTGCTCGGCTGGCTGGGCCCAGTTCCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPCPRPQMSGCG*LLGWLGPVPWL Trigger: CAGCCAGGGAACTGGGCCCAGCCAGCCGAGCAGGCAGCCGCAGCCTGACATTTGAGGTCGAGGGCAAGGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | AGGCTGAGCCCTTGCCCTCGACCTCAAATGTCAGGCTaGGGCTGCCTGCTCGGCTGGCTGGGCCCAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RLSPCPRPQMSG*GCLLGWLGPVP Trigger: GGGAACTGGGCCCAGCCAGCCGAGCAGGCAGCCGCAGCCTGACATTTGAGGTCGAGGGCAAGGGCTCAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | CCAGCAGTTGCAGGGCGCCCGCCGCCAGAGCAGCGGTaGCACGGGGTGGTTGAGCCTGTGGTAGATGACAGT | + |
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Preference number: 6 (lower is better) Translates to: PAVAGRPPPEQR*HGVVEPVVDDS Trigger: ACTGTCATCTACCACAGGCTCAACCACCCCGTGTCACCGCTGCTCTGGCGGCGGGCGCCCTGCAACTGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | TCCTGGCCTCCTGGTCTGGGAAGAAGGAGGCTGCGATaGTGTGGCGCAGGCGCCAGGCGTAGGCCTGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SWPPGLGRRRLR*CGAGARRRPVA Trigger: TGCTACAGGCCTACGCCTGGCGCCTGCGCCACACCATCGCAGCCTCCTTCTTCCCAGACCAGGAGGCCAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | AGCCGGGCCTGCAAGTGGCTAAGCCTCCTGGCCTCCTaGTCTGGGAAGAAGGAGGCTGCGATGGTGTGGCGC | + |
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Preference number: 6 (lower is better) Translates to: SRACKWLSLLAS*SGKKEAAMVWR Trigger: GCGCCACACCATCGCAGCCTCCTTCTTCCCAGACCAGGAGGCCAGGAGGCTTAGCCACTTGCAGGCCCGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | TGGGGCGTGAAGCGCAGCTCCCACTGGAAGGAGCGCTaGATGGAGGCAAACACGCTCTCCACCGGAGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: WGVKRSSHWKER*MEANTLSTGGW Trigger: CCAACCTCCGGTGGAGAGCGTGTTTGCCTCCATGCAGCGCTCCTTCCAGTGGGAGCTGCGCTTCACGCCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | GCTGCCTGCTCGGCTGGCTGGGCCCAGTTCCCTGGCTaGCTGGCGCAGCTGGTAAGTGGTATTAAGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: AACSAGWAQFPG*LAQLVSGIKQT Trigger: AGTCTGCTTAATACCACTTACCAGCTGCGCCAGGCAGCCAGGGAACTGGGCCCAGCCAGCCGAGCAGGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | TCCCGGGTGGCCATAGTGCCGGGCTGTTTGTTCAGGTaGTCACTCTGGTTGTGTCTCCTCTGGAGCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRVAIVPGCLFR*SLWLCLLWSRA Trigger: GGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCACTATGGCCACCCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 90 bp | CGGGTGGCCATAGTGCCGGGCTGTTTGTTCAGGTGGTCACTCTGGTaGTGTCTCCTCTGGAGCCGGGCCTGCAAGTGGCTAAGCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RVAIVPGCLFRWSLW*CLLWSRACKWLSLL Trigger: CAGGAGGCTTAGCCACTTGCAGGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCACTATGGCCACCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | GAACAACCCGGTGACCACCCGCTGAGTGCCCAGTGCTaGTCGAGCCAGGAACTCCAGGCCAGAGAAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: EQPGDHPLSAQC*SSQELQAREVF Trigger: GAAGACTTCTCTGGCCTGGAGTTCCTGGCTCGAGCAGCACTGGGCACTCAGCGGGTGGTCACCGGGTTGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | TGCCTAAGACGTTTGGCACCACAGCGACAGCCAGGTTaGCTGCACTGTAGGACAGGAGCAAGCGGCGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CLRRLAPQRQPG*LHCRTGASGGP Trigger: AGGGCCGCCGCTTGCTCCTGTCCTACAGTGCAGCCAACCTGGCTGTCGCTGTGGTGCCAAACGTCTTAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | AGACAGCTCAGCAGCTCCTCCCGTGACAACTTAGGCTaGGCTGTTTGGAGCAGCCACGGAGGCGGAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: RQLSSSSRDNLG*AVWSSHGGGEV Trigger: GACCTCTCCGCCTCCGTGGCTGCTCCAAACAGCCCAGCCTAAGTTGTCACGGGAGGAGCTGCTGAGCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | TGGAGGCCCAAGGGAGTCATGTGCCTGAGGTCCCTGTaGCTCCAGAGTCCGAGTTCCCTGTCCAGGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: WRPKGVMCLRSL*LQSPSSLSRLP Trigger: AGGAAGCCTGGACAGGGAACTCGGACTCTGGAGTCACAGGGACCTCAGGCACATGACTCCCTTGGGCCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | AGCAGCTCCTCCCGTGACAACTTAGGCTGGGCTGTTTaGAGCAGCCACGGAGGCGGAGAGGTCAGCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: SSSSRDNLGWAV*SSHGGGEVSRC Trigger: ACATCTGCTGACCTCTCCGCCTCCGTGGCTGCTCCAAACAGCCCAGCCTAAGTTGTCACGGGAGGAGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | GCCATAGTGCCGGGCTGTTTGTTCAGGTGGTCACTCTaGTTGTGTCTCCTCTGGAGCCGGGCCTGCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: AIVPGCLFRWSL*LCLLWSRACKW Trigger: CCACTTGCAGGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCACTATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | CTCCTGAGTGATCGTGTGCATGTGAAGGCGGAAGGCTaGGCCCTTGCCCTCGACCTCAAATGTCAGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLSDRVHVKAEG*ALALDLKCQAA Trigger: CGCAGCCTGACATTTGAGGTCGAGGGCAAGGGCTCAGCCTTCCGCCTTCACATGCACACGATCACTCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | TGTTTGTTCAGGTGGTCACTCTGGTTGTGTCTCCTCTaGAGCCGGGCCTGCAAGTGGCTAAGCCTCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: CLFRWSLWLCLL*SRACKWLSLLA Trigger: GGCCAGGAGGCTTAGCCACTTGCAGGCCCGGCTCCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 72 bp | GCACTTGCCCAGCTGCACGCACATTGCCTAAGACGTTaGGCACCACAGCGACAGCCAGGTTGGCTGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: ALAQLHAHCLRR*APQRQPGWLHC Trigger: ACAGTGCAGCCAACCTGGCTGTCGCTGTGGTGCCAAACGTCTTAGGCAATGTGCGTGCAGCTGGGCAAGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 90 bp | CACAGCTCAGCACTTGCCCAGCTGCACGCACATTGCCTAAGACGTTaGGCACCACAGCGACAGCCAGGTTGGCTGCACTGTAGGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: HSSALAQLHAHCLRR*APQRQPGWLHCRTG Trigger: TCCTGTCCTACAGTGCAGCCAACCTGGCTGTCGCTGTGGTGCCAAACGTCTTAGGCAATGTGCGTGCAGCTGGGCAAGTGCTGAGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 90 bp | GAGCCCTCAGTAACACAGCTCAGCACTTGCCCAGCTGCACGCACATaGCCTAAGACGTTTGGCACCACAGCGACAGCCAGGTTGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: EPSVTQLSTCPAART*PKTFGTTATARLAA Trigger: TGCAGCCAACCTGGCTGTCGCTGTGGTGCCAAACGTCTTAGGCAATGTGCGTGCAGCTGGGCAAGTGCTGAGCTGTGTTACTGAGGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | TCGAGGTCATATGGAGGCCCAAGGGAGTCATGTGCCTaGGGTCCCTGTGACTCCAGAGTCCGAGTTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SRSYGGPRESCA*GPCDSRVRVPC Trigger: ACAGGGAACTCGGACTCTGGAGTCACAGGGACCTCAGGCACATGACTCCCTTGGGCCTCCATATGACCTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 72 bp | GTAACACAGCTCAGCACTTGCCCAGCTGCACGCACATaGCCTAAGACGTTTGGCACCACAGCGACAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VTQLSTCPAART*PKTFGTTATAR Trigger: CCTGGCTGTCGCTGTGGTGCCAAACGTCTTAGGCAATGTGCGTGCAGCTGGGCAAGTGCTGAGCTGTGTTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 72 bp | TTCCTGGATTCCCGGGTGGCCATAGTGCCGGGCTGTTaGTTCAGGTGGTCACTCTGGTTGTGTCTCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLDSRVAIVPGC*FRWSLWLCLLW Trigger: CCAGAGGAGACACAACCAGAGTGACCACCTGAACAAACAGCCCGGCACTATGGCCACCCGGGAATCCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | ACTCCAGGCCAGAGAAGTCTTCCAGGATCTCCTGAGTaGTCGTGTGCATGTGAAGGCGGAAGGCTGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TPGQRSLPGSPE*SCACEGGRLSP Trigger: AGGGCTCAGCCTTCCGCCTTCACATGCACACGATCACTCAGGAGATCCTGGAAGACTTCTCTGGCCTGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | GCCGAGTCGCGTAGATATTGTCGAAACGCAGGTCAGTaGGGTAGCGATGAAGGTACCAGGCCGACTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: AESRRYCRNAGQ*GSDEGTRPTLP Trigger: TGGGAGAGTCGGCCTGGTACCTTCATCGCTACCTCACTGACCTGCGTTTCGACAATATCTACGCGACTCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | GGAAGGCCCCATAGTCTGAGGCCACTGTCACAGCTGTaGCTACTAAGAGCAATGCCAGTAGCCCCAGCCTTA | + |
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Preference number: 6 (lower is better) Translates to: GRPHSLRPLSQL*LLRAMPVAPAL Trigger: TAAGGCTGGGGCTACTGGCATTGCTCTTAGTAGCCACAGCTGTGACAGTGGCCTCAGACTATGGGGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | AAGCTGCAAAGAGACCAGCCAGTGATGCGCCAGGCCTaGGATAAGACTGGCCAAGGAAACACACAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KLQRDQPVMRQA*DKTGQGNTQEK Trigger: CTTCTCCTGTGTGTTTCCTTGGCCAGTCTTATCGCAGGCCTGGCGCATCACTGGCTGGTCTCTTTGCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS GCA 72 bp | CTCTCCAAAGAGCCCTCAGTAACACAGCTCAGCACTTaGCCAGCTGCACGCACATTGCCTAAGACGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LSKEPSVTQLST*PAARTLPKTFG Trigger: GCCAAACGTCTTAGGCAATGTGCGTGCAGCTGGGCAAGTGCTGAGCTGTGTTACTGAGGGCTCTTTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CCA 72 bp | GCGATAAGACTGGCCAAGGAAACACACAGGAGAAGCTaGGTCAGTAGTTCGTTACAGCTGGCTGGGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: AIRLAKETHRRS*VSSSLQLAGTG Trigger: GCCTGTCCCAGCCAGCTGTAACGAACTACTGACCCAGCTTCTCCTGTGTGTTTCCTTGGCCAGTCTTATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS TCA 72 bp | TTGACTGTGAGTGTGATTGGGACAGTGGGTAACTTCTaGGCCCAGGCTACAGCTGCTTGTGCCAAGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LTVSVIGTVGNF*AQATAACAKRK Trigger: CTTCCTCTTGGCACAAGCAGCTGTAGCCTGGGCTCAGAAGTTACCCACTGTCCCAATCACACTCACAGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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| CDS CAA 72 bp | AGGATGAAGTCCAGAACCTTATATGAGGCGTCATATTaGACTGTGAGTGTGATTGGGACAGTGGGTAACTTC | + |
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Preference number: 6 (lower is better) Translates to: RMKSRTLYEASY*TVSVIGTVGNF Trigger: GAAGTTACCCACTGTCCCAATCACACTCACAGTCAAATATGACGCCTCATATAAGGTTCTGGACTTCATCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029213.5 |
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