Pregenerated sensors for OCRL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001173Ensembl transcript IDs: ENSMUST00000001202.15, ENSMUST00000115013.2, ENSMUST00000115020.8, ENSMUST00000154732.2
Found 324 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGGCTGAGCTGGACAAAAGGCCGAGGCAGTGAAGCAACTTGGTaGTTTGGCCTGATGAAGGAAGGGCACTACGTGCATGCTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: PRLSWTKGRGSEATW*FGLMKEGHYVHAPQ Trigger: CTGTGGAGCATGCACGTAGTGCCCTTCCTTCATCAGGCCAAAGCACCAAGTTGCTTCACTGCCTCGGCCTTTTGTCCAGCTCAGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR CCA 90 bp | CATCCCAGGCTGAGCTGGACAAAAGGCCGAGGCAGTGAAGCAACTTaGTGCTTTGGCCTGATGAAGGAAGGGCACTACGTGCATGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: HPRLSWTKGRGSEAT*CFGLMKEGHYVHAP Trigger: TGGAGCATGCACGTAGTGCCCTTCCTTCATCAGGCCAAAGCACCAAGTTGCTTCACTGCCTCGGCCTTTTGTCCAGCTCAGCCTGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR CCA 90 bp | GGAGATAGGAGAATGGGTTCTGAGGGTTACCCTCAATGCTTGGTTTaGAGGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: GDRRMGSEGYPQCLV*RARKAPGTSLEVHR Trigger: TCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCCTCCAAACCAAGCATTGAGGGTAACCCTCAGAACCCATTCTCCTATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR TCA 90 bp | CCTGCCATTCTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTaGACATGCAAGTGGCACCACGAATTCATGGACGCTAGGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PAILVGEVVVISSGT*TCKWHHEFMDARSS Trigger: GGAGCTCCTAGCGTCCATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAGAATGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
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| 3UTR TCA 90 bp | AGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTaGGAGCATGGAGGAAGTGTGCAAAGTAGTGACATGAGGAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: RTPTESLASSRLPSK*EHGGSVQSSDMRRG Trigger: CCCTCTCCTCATGTCACTACTTTGCACACTTCCTCCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR TCA 90 bp | TCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTGTTaGGAGAGGCCAGTAACTTTCCCCGACACTTTAGGAGATAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: SLLEGGGCGAQSEPC*ERPVTFPDTLGDRR Trigger: TCTCCTATCTCCTAAAGTGTCGGGGAAAGTTACTGGCCTCTCTCAACAGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR TCA 90 bp | ATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCTaGTATACTCACAGTGCTTTCCTCGCTGTTGTGATGTTTCTCACA | + |
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Preference number: 1 (lower is better) Translates to: IVAGHGDWEAGMFSF*YTHSAFLAVVMFLT Trigger: TGTGAGAAACATCACAACAGCGAGGAAAGCACTGTGAGTATATCAGAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR TCA 90 bp | GAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTaGGCTATAGCAAGTAGTACTTGTAGGCTTAGAACAGGAAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: EGGSKVHHTKNCRQV*AIASSTCRLRTGRP Trigger: AGGCCTTCCTGTTCTAAGCCTACAAGTACTACTTGCTATAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR TCA 90 bp | CCCTGTGGACCACCTTGCTCCAGCTCCTACCATCTGCTTCTTCAGTaGTTACTTTCTGGCCTAATAGATATGACAAAATTCTTCTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: PCGPPCSSSYHLLLQ*LLSGLIDMTKFFCS Trigger: AGAGCAGAAGAATTTTGTCATATCTATTAGGCCAGAAAGTAATCACTGAAGAAGCAGATGGTAGGAGCTGGAGCAAGGTGGTCCACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR GCA 90 bp | GTATCAGCCAATAGACTGGAATCATTTCTTCCCGAAGATGCTAGGTaGAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: VSANRLESFLPEDAR*SLSLPVKPEILNSE Trigger: CTCTGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTCTATTGGCTGATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCAAGCAAGTCAATTTCACCAGGCAGTTTTGCAGCCAGAAGCTGGCAGCTGATGTGGAGCTCAGAGTaGGCCCTGTTGAGAGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: KPSKSISPGSFAARSWQLMWSSE*ALLREA Trigger: GGCCTCTCTCAACAGGGCTCACTCTGAGCTCCACAT...CAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGATAGACATCCCAGGCTaGGCTGGACAAAAGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: TLEELGMKRLRGRIGRIGIDIPG*AGQKAE Trigger: CTCGGCCTTTTGTCCAGCTCAGCCTGGGATGTCTAT...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR CAA 90 bp | ACTTTAGGAGATAGGAGAATGGGTTCTGAGGGTTACCCTCAATGCTaGGTTTGGAGGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TLGDRRMGSEGYPQC*VWRARKAPGTSLEV Trigger: CACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCCTCCAAACCAAGCATTGAGGGTAACCCTCAGAACCCATTCTCCTATCTCCTAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCACTTTTCAGATCATTTTaGAGTAGTCGGAGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GSGFLVGEMGTNMQDCSALFRSF*SSRSPR Trigger: CCTTGGGCTCCGACTACTTCAAAATGATCTGAAAAG...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACCTTTCCTCGCTGTTGTaGTGTTTCTCACATCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDLSSLL*CFSHQW Trigger: CCACTGATGTGAGAAACATCACAACAGCGAGGAAAG...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTGAGGGTTACCCTCAATaGTTGGTTTGGAGGGCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VFLSLCLKEADVELRVSPEGYPQ*LVWRAR Trigger: CCTCGCCCTCCAAACCAAGCATTGAGGGTAACCCTC...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCCTTTTCAGATCATTTTaGAGTAGTCGGAGCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: NFTVQDTHRVTSLIQASFLFRSF*SSRSPR Trigger: CCTTGGGCTCCGACTACTTCAAAATGATCTGAAAAG...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGCTTGGGTTGGTTTGGTaGATGAAACCAAGCAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: TLEELGMKRLRGRIGRIGLGLVW*MKPSKS Trigger: TGACTTGCTTGGTTTCATTCACCAAACCAACCCAAG...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGAGGGTGGGTCCAAAGTaGATCATACAAAGAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: DTHRVTSLIQASFKVRAWRVGPK*IIQRTV Trigger: TACAGTTCTTTGTATGATGCACTTTGGACCCACCCT...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | AAACCAAGCAAGTCAATTTCACCAGGCAGTTTTGCAGCCAGAAGCTGGCAGCTGACTGTGATGCAAACATaGCTCTGGAAGTGGGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: KPSKSISPGSFAARSWQLTVMQT*LWKWVS Trigger: AGAAACCCACTTCCAGAGTCATGTTTGCATCACAGT...CAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGCCACTAATCAACTGTTaGCCCAATCAGATCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: TLEELGMKRLRGRIGRIGPLINC*PNQIFS Trigger: ACTGAAGATCTGATTGGGTCAACAGTTGATTAGTGG...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCAGGGCACTACGTGCATaGTCCACAGAGCCCCCACTA | + |
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Preference number: 2 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPRALRA*STEPPL Trigger: TAGTGGGGGCTCTGTGGAGCATGCACGTAGTGCCCT...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGAGGGCTCCACCAAGTGTaGTTCCCCACGAAGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRGLHQV*FPTKAN Trigger: GTTGGCCTTCGTGGGGAACCACACTTGGTGGAGCCC...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTATTTGCAGCCAGAAGCTaGCAGCTGGTTTGTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLFAARS*QLVCQS Trigger: TGACTGACAAACCAGCTGCCAGCTTCTGGCTGCAAA...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAGGCTTCCTTCAAAGTaGGAGCATGGAGGAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLRLPSK*EHGGSV Trigger: CACACTTCCTCCATGCTCTCACTTTGAAGGAAGCCT...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCTTCACCAGGCAGTTTTaGAGCCAGAAGCTGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPFTRQF*SQKLAA Trigger: AGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAA...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAGGCCCTCTCCTTGGATaGTACAAGATACTACTGATG | + |
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Preference number: 2 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLGPLLG*YKILLM Trigger: CATCAGTAGTATCTTGTACCATCCAAGGAGAGGGCC...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTACAATCAGATCTTCAGTaGGCTGGCACCAATACTTTG | + |
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Preference number: 2 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLQSDLQ*AGTNTL Trigger: CAAAGTATTGGTGCCAGCTCACTGAAGATCTGATTG...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCACCTCAATGCTTGGTTTaGAGGGCGAGGAAAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EDARCSLSLPVKPEILNSPQCLV*RARKAP Trigger: AGGAGCTTTCCTCGCCCTCCAAACCAAGCATTGAGG...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCAAGGCTTCCTTCAAAGTaGGAGCATGGAGGAAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: EDARCSLSLPVKPEILNSRLPSK*EHGGSV Trigger: CACACTTCCTCCATGCTCTCACTTTGAAGGAAGCCT...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGATCCTGGGACCTCACTTaGGGTGCACAGACTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRSWDLT*GAQTSL Trigger: AAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGA...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTTGTCTAAAAGGATTTTaGTGTGTAGGATATGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: VFLSLCLKEADVELRVSPCLKGF*CVGYGK Trigger: CTTACCATATCCTACACAGCAAAATCCTTTTAGACA...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGATTCACCAGGCAGTTTTaGAGCCAGAAGCTGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRFTRQF*SQKLAA Trigger: AGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAA...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTTCCTGGGACCTCACTTaGGGTGCACAGACTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: NKMKTLESFQVEEVMCVASWDLT*GAQTSL Trigger: AAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGA...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCGATAATCATGAGGACTaGGAAGCAGGGCAGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPDNHED*EAGQKT Trigger: TGTTTTCTGCCCTGCTTCCCAGTCCTCATGATTATC...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAACTGTGATGCAAACATaGCTCTGGAAGTGGGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPTVMQT*LWKWVS Trigger: AGAAACCCACTTCCAGAGTCATGTTTGCATCACAGT...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAATGACAAAATTCTTCTaGTCTCCGTCTTCCACTAAT | + |
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Preference number: 2 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLMTKFF*SPSSTN Trigger: ATTAGTGGAAGACGGAGAGCAGAAGAATTTTGTCAT...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCCCAGCTCCTACCATCTaGTTCTTCAGTGATTACTTT | + |
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Preference number: 2 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPPAPTI*FFSDYF Trigger: AAAGTAATCACTGAAGAAGCAGATGGTAGGAGCTGG...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCAAGTGAAGCAACTTGGTaGTTTGGCCTGATGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EDARCSLSLPVKPEILNSSEATW*FGLMKE Trigger: TTCCTTCATCAGGCCAAAGCACCAAGTTGCTTCACT...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCAAGATCTTCAGTGAGCTaGCACCAATACTTTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: EDARCSLSLPVKPEILNSRSSVS*HQYFDS Trigger: GGAATCAAAGTATTGGTGCCAGCTCACTGAAGATCT...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCACATCTGCTTCTTCAGTaGTTACTTTCTGGCCTAATA | + |
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Preference number: 2 (lower is better) Translates to: EDARCSLSLPVKPEILNSHLLLQ*LLSGLI Trigger: TATTAGGCCAGAAAGTAATCACTGAAGAAGCAGATG...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR GCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGAAGGGTGGGTCCAAAGTaGATCATACAAAGAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRRVGPK*IIQRTV Trigger: TACAGTTCTTTGTATGATGCACTTTGGACCCACCCT...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR CCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTGATAATCATGAGGACTaGGAAGCAGGGCAGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: NKMKTLESFQVEEVMCVADNHED*EAGQKT Trigger: TGTTTTCTGCCCTGCTTCCCAGTCCTCATGATTATC...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCCTAGCCTATAGTACATaGGATCCTGTCTCAAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AVVRMLIYHLSQGPSLILLAYST*DPVSKR Trigger: TCTTTTTGAGACAGGATCTCATGTACTATAGGCTAG...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR CAA 90 bp | TTCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTaGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: FFYIQSINNVSDVSM*FLYFEHTSRYLAGH Trigger: ATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR-3UTR CCA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGCTTGCAGGACATCAGTaGTTATTAGGAAATTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLLAGHQ*LLGNSH Trigger: GTGAGAATTTCCTAATAACCACTGATGTCCTGCAAG...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR-3UTR GCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGATGTCTAAAAGGATTTTaGTGTGTAGGATATGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRCLKGF*CVGYGK Trigger: CTTACCATATCCTACACAGCAAAATCCTTTTAGACA...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | GGGACCAACATGCAGGATTGCTCCGCATGTCAAGTGTaGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GTNMQDCSACQV*IVAGHGDWEAG Trigger: CCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTGACATGCGGAGCAATCCTGCATGTTGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | GAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTGTTaGGAGAGGCCAGTAACTTTCCCCGACACTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGGGCGAQSEPC*ERPVTFPDTLG Trigger: TCCTAAAGTGTCGGGGAAAGTTACTGGCCTCTCTCAACAGGGCTCACTCTGAGCTCCACATCCGCCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | ACATCCCAGGCTGAGCTGGACAAAAGGCCGAGGCAGTaGAGCAACTTGGTGCTTTGGCCTGATGAAGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSQAELDKRPRQ*SNLVLWPDEGR Trigger: CCTTCCTTCATCAGGCCAAAGCACCAAGTTGCTTCACTGCCTCGGCCTTTTGTCCAGCTCAGCCTGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | CTGAGCTGGACAAAAGGCCGAGGCAGTGAAGCAACTTaGTGCTTTGGCCTGATGAAGGAAGGGCACTACGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSWTKGRGSEAT*CFGLMKEGHYV Trigger: CACGTAGTGCCCTTCCTTCATCAGGCCAAAGCACCAAGTTGCTTCACTGCCTCGGCCTTTTGTCCAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR GCA 72 bp | AGCTGGACAAAAGGCCGAGGCAGTGAAGCAACTTGGTaGTTTGGCCTGATGAAGGAAGGGCACTACGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: SWTKGRGSEATW*FGLMKEGHYVH Trigger: ATGCACGTAGTGCCCTTCCTTCATCAGGCCAAAGCACCAAGTTGCTTCACTGCCTCGGCCTTTTGTCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | AGAATGGGTTCTGAGGGTTACCCTCAATGCTTGGTTTaGAGGGCGAGGAAAGCTCCTGGGACCTCACTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RMGSEGYPQCLV*RARKAPGTSLE Trigger: CTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCCTCCAAACCAAGCATTGAGGGTAACCCTCAGAACCCATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | ATAGGAGAATGGGTTCTGAGGGTTACCCTCAATGCTTaGTTTGGAGGGCGAGGAAAGCTCCTGGGACCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IGEWVLRVTLNA*FGGRGKLLGPH Trigger: GTGAGGTCCCAGGAGCTTTCCTCGCCCTCCAAACCAAGCATTGAGGGTAACCCTCAGAACCCATTCTCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | CTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTaGACATGCAAGTGGCACCACGAATTCATGGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: LVGEVVVISSGT*TCKWHHEFMDA Trigger: AGCGTCCATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR TCA 72 bp | GGTGCACAGACTTCTCTTTTGACTGTGATGCAAACATaGCTCTGGAAGTGGGTTTCTAGTGGGGGAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GAQTSLLTVMQT*LWKWVSSGGDG Trigger: CCCATCTCCCCCACTAGAAACCCACTTCCAGAGTCATGTTTGCATCACAGTCAAAAGAGAAGTCTGTGCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR GCA 72 bp | AGTGTCAAGGAGTCAAGGGCAGTCTTTTTAAGTCTTTaGTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVKESRAVFLSL*LKEADVELRVS Trigger: GCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGACTGCCCTTGACTCCTTGACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | AGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTaGTCCCACGGACCAGTCTCTCTTACACAGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RVISSGRGNVCG*SHGPVSLTQHL Trigger: CAAGTGCTGTGTAAGAGAGACTGGTCCGTGGGACCAGCCACACACATTACCTCTTCCACTTGAAATGACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTACTCCTGGGACCTCACTaGAGGTGCACAGACTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLLLGPH*RCTDFS Trigger: AGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAG...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | TTCCTGGCCCTCTCCTTGGATGGTACAAGATACTACTaGTGGAATCAGTGCCCAAGATTGTACACACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLALSLDGTRYY*WNQCPRLYTQP Trigger: AGGCTGTGTGTACAATCTTGGGCACTGATTCCATCAGTAGTATCTTGTACCATCCAAGGAGAGGGCCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGAGTCTTTTTAAGTCTTaGCTTGAAGGAGGCGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: TLEELGMKRLRGRIGRIGSLFKS*LEGGGC Trigger: ACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGACT...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR GCA 72 bp | AATGAAACCAAGCAAGTCAATTTCACCAGGCAGTTTTaGAGCCAGAAGCTGGCAGCTGGTTTGTCAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NETKQVNFTRQF*SQKLAAGLSVN Trigger: GTTGACTGACAAACCAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | TTTGATGGTGGATGTTTTCCTGGCCCTCTCCTTGGATaGTACAAGATACTACTGATGGAATCAGTGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FDGGCFPGPLLG*YKILLMESVPK Trigger: CTTGGGCACTGATTCCATCAGTAGTATCTTGTACCATCCAAGGAGAGGGCCAGGAAAACATCCACCATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCATTTCACCAGGCAGTTTaGCAGCCAGAAGCTGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPFHQAV*QPEAGS Trigger: GCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAA...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCATTCTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTGAACATGCAACCTGTGTTTTATCCCTaGCAGCATAATTTAGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CHSCGRGGGNIQWNLNMQPVFYP*QHNLVC Trigger: GCACACTAAATTATGCTGCAAGGGATAAAACACAGG...TTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAGAATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR TCA 72 bp | ACTGCACAAACGCTTGTAACAATCACATGGAGACAGTaGACTTCACTGTTCAGGACACCCACAGAGTCACTA | + |
|
Preference number: 3 (lower is better) Translates to: TAQTLVTITWRQ*TSLFRTPTESL Trigger: TAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATTGTTACAAGCGTTTGTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | ATTAGGAAATTCTCACCGAGTCAGAGGCCTCTGATATaGGAATGCTTAGGGACAATTTCCAGGGACCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: IRKFSPSQRPLI*ECLGTISRDHS Trigger: ACTGTGGTCCCTGGAAATTGTCCCTAAGCATTCTCATATCAGAGGCCTCTGACTCGGTGAGAATTTCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAGGTTACCCTCAATGCTaGGTTTGGAGGGCGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPGYPQC*VWRARK Trigger: TTTCCTCGCCCTCCAAACCAAGCATTGAGGGTAACC...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | CATTCTGATATACTCACAGTGCTTTCCTCGCTGTTGTaGTGTTTCTCACATCAGTGGGACGCCATCTCTATA | + |
|
Preference number: 3 (lower is better) Translates to: HSDILTVLSSLL*CFSHQWDAISI Trigger: TATAGAGATGGCGTCCCACTGATGTGAGAAACATCACAACAGCGAGGAAAGCACTGTGAGTATATCAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | AATTCTTCTGCTCTCCGTCTTCCACTAATCAACTGTTaGCCCAATCAGATCTTCAGTGAGCTGGCACCAATA | + |
|
Preference number: 3 (lower is better) Translates to: NSSALRLPLINC*PNQIFSELAPI Trigger: TATTGGTGCCAGCTCACTGAAGATCTGATTGGGTCAACAGTTGATTAGTGGAAGACGGAGAGCAGAAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CCA 72 bp | TTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTaGTTATTAGGAAATTCTCACCGAGTCAGAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FEHTSRYLAGHQ*LLGNSHRVRGL Trigger: GAGGCCTCTGACTCGGTGAGAATTTCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCGAAATATGGTAACTTaGGCTTGGCAATATATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NHMETVNFTVQDTHRVTSRNMVT*AWQYMS Trigger: AGACATATATTGCCAAGCCAAAGTTACCATATTTCG...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | ACCAAGTGTGGTTCCCCACGAAGGCCAACATTACAGTaGCATACAGATATCATTGTAGTAGAACTGCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKCGSPRRPTLQ*HTDIIVVELHK Trigger: TTTGTGCAGTTCTACTACAATGATATCTGTATGTCACTGTAATGTTGGCCTTCGTGGGGAACCACACTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | CCACCTTGCTCCAGCTCCTACCATCTGCTTCTTCAGTaGTTACTTTCTGGCCTAATAGATATGACAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: PPCSSSYHLLLQ*LLSGLIDMTKF Trigger: GAATTTTGTCATATCTATTAGGCCAGAAAGTAATCACTGAAGAAGCAGATGGTAGGAGCTGGAGCAAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR GCA 72 bp | GGAAGCAGGGATGTTTTCATTCTGATATACTCACAGTaGTTTCCTCGCTGTTGTGATGTTTCTCACATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GSRDVFILIYSQ*FPRCCDVSHIS Trigger: ACTGATGTGAGAAACATCACAACAGCGAGGAAAGCACTGTGAGTATATCAGAATGAAAACATCCCTGCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | GAATGCTTATCTATCATCTATCACAAGGACCAAGTTTaGTTCTCAGGACTGAGTAAAACCAGGGGTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ECLSIIYHKDQV*FSGLSKTRGAV Trigger: TACAGCACCCCTGGTTTTACTCAGTCCTGAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR CCA 72 bp | CAGCTCCTACCATCTGCTTCTTCAGTGATTACTTTCTaGCCTAATAGATATGACAAAATTCTTCTGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLLPSASSVITF*PNRYDKILLLS Trigger: GGAGAGCAGAAGAATTTTGTCATATCTATTAGGCCAGAAAGTAATCACTGAAGAAGCAGATGGTAGGAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGCAGGATACATACCTTTaGTTCTCCCAAGAACTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLQDTYL*FSQELN Trigger: ATTGAGTTCTTGGGAGAACAAAAGGTATGTATCCTG...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR-3UTR CAA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGCGAAATATGGTAACTTaGGCTTGGCAATATATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLRNMVT*AWQYMS Trigger: AGACATATATTGCCAAGCCAAAGTTACCATATTTCG...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR GCA 72 bp | AATAGACTGGAATCATTTCTTCCCGAAGATGCTAGGTaGAGTCTTTCACTACCAGTTAAACCTGAAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NRLESFLPEDAR*SLSLPVKPEIL Trigger: AAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTCTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR GCA 72 bp | TTACTTTCTGGCCTAATAGATATGACAAAATTCTTCTaGTCTCCGTCTTCCACTAATCAACTGTTGACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LLSGLIDMTKFF*SPSSTNQLLTQ Trigger: TTGGGTCAACAGTTGATTAGTGGAAGACGGAGAGCAGAAGAATTTTGTCATATCTATTAGGCCAGAAAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR TCA 72 bp | CCAGTTAAACCTGAAATCCTTAATTCAGAGCAACTATaGAATAGTACCTTGGAGGAATTAGGAATGAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PVKPEILNSEQL*NSTLEELGMKR Trigger: CCTCTTCATTCCTAATTCCTCCAAGGTACTATTTCATAGTTGCTCTGAATTAAGGATTTCAGGTTTAACTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCACCAAGAGGAACTGGATaGCATGCTGGCGGTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAPRGTG*HAGGHL Trigger: CAAATGACCGCCAGCATGCCATCCAGTTCCTCTTGG...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCCGGCCAGGTGCGAATTaGCAATGCAGAAAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFRPGAN*QCRKWC Trigger: ACACCACTTTCTGCATTGTCAATTCGCACCTGGCCG...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCAACCTTCACCCCAATATaGAACAGGGCGCTAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSATFTPI*NRALTG Trigger: ACCTGTTAGCGCCCTGTTCCATATTGGGGTGAAGGT...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCATGGCACCTTGGAAGCTaGGAAATGACCTGTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAWHLGS*EMTCLQ Trigger: CTGCAAACAGGTCATTTCCCAGCTTCCAAGGTGCCA...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CAA 72 bp | GATAGGAGAATGGGTTCTGAGGGTTACCCTCAATGCTaGGTTTGGAGGGCGAGGAAAGCTCCTGGGACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRRMGSEGYPQC*VWRARKAPGTS Trigger: TGAGGTCCCAGGAGCTTTCCTCGCCCTCCAAACCAAGCATTGAGGGTAACCCTCAGAACCCATTCTCCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CAA 72 bp | AATGGGCACAGGAGAGGCATTCCCCTGTGGACCACCTaGCTCCAGCTCCTACCATCTGCTTCTTCAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: NGHRRGIPLWTT*LQLLPSASSVI Trigger: AATCACTGAAGAAGCAGATGGTAGGAGCTGGAGCAAGGTGGTCCACAGGGGAATGCCTCTCCTGTGCCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCTGGAACAAGAAGCTGTaGCTGAGCTTCCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFWNKKL*LSFLSF Trigger: GAAGCTCAGGAAGCTCAGTCACAGCTTCTTGTTCCA...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGCAGATCCGAGGATCATaGGCAGAGTCAAGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: DTHRVTSLIQASFKVRAWQIRGS*AESRHR Trigger: GCGATGTCTTGACTCTGCTCATGATCCTCGGATCTG...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACTGGCACCTTGGAAGCTaGGAAATGACCTGTTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDWHLGS*EMTCLQ Trigger: CTGCAAACAGGTCATTTCCCAGCTTCCAAGGTGCCA...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACAACTGGATGGCATGCTaGCGGTCATTTGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDNWMAC*RSFGVC Trigger: ACAGACTCCAAATGACCGCCAGCATGCCATCCAGTT...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CAA 72 bp | TGGTTTGGAGGGCGAGGAAAGCTCCTGGGACCTCACTaGAGGTGCACAGACTTCTCTTTTGACTGTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WFGGRGKLLGPH*RCTDFSFDCDA Trigger: TGCATCACAGTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCCTCCAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCATATCCAGGCAATCAATaGTCTGCTGTAACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAYPGNQ*SAVTPP Trigger: AGGAGGAGTTACAGCAGATCATTGATTGCCTGGATA...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCCAGATCCGAGGATCATaGGCAGAGTCAAGACATCGC | + |
|
Preference number: 4 (lower is better) Translates to: NFTVQDTHRVTSLIQASFQIRGS*AESRHR Trigger: GCGATGTCTTGACTCTGCTCATGATCCTCGGATCTG...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACGAGTCTGTCTTGTCATaGGGTTTGGTGGAGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDESVLS*GLVEVL Trigger: TAAGACCTCCACCAAACCTCATGACAAGACAGACTC...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | AAACCAAGCAAGTCAATTTCACCAGGCAGTTTTGCAGCCAGAAGCTGGCAGCTGGCCAAGGTTCTAAGCTaGTGTCTGGAGACTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPSKSISPGSFAARSWQLAKVLS*CLETGR Trigger: ACGGCCAGTCTCCAGACAGCAGCTTAGAACCTTGGC...CAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCAGAGTTCACGAAGGAATaGCATCAAGTAGCGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAEFTKE*HQVAEN Trigger: GTTTTCCGCTACTTGATGGCATTCCTTCGTGAACTC...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCGCGGGACAGTCTGATTaGGGACTGAAAAAGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFAGQSD*GLKKSF Trigger: GAATGACTTTTTCAGTCCCCAATCAGACTGTCCCGC...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGGAAGGGGTCGCTCACTaGTACCTTCATCCAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLEELGMKRLRGRIGRIGEGVAH*YLHPRV Trigger: TACCCTTGGATGAAGGTACCAGTGAGCGACCCCTTC...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCCTGGTACCAGCTAGATaGGTCTTTTTGTTCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFLVPAR*VFLFWN Trigger: GTTCCAGAACAAAAAGACTCATCTAGCTGGTACCAG...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGACAGCTCATAACAGATaGCTGGCTCTGGCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLEELGMKRLRGRIGRIGTAHNR*LALAEL Trigger: AAGCTCTGCCAGAGCCAGTCATCTGTTATGAGCTGT...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATTCTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGCCAAGGTTCTAAGCTaGTGTCTGGAGACTGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CHSCGRGGGNIQWNLNMQAKVLS*CLETGR Trigger: ACGGCCAGTCTCCAGACAGCAGCTTAGAACCTTGGC...TTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAGAATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCAGTCCTCCTGGTGACATaGATATTTGAACAAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAVLLVT*IFEQVI Trigger: GATCACTTGTTCAAATATGCATGTCACCAGGAGGAC...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCAAGGCAATCAATGATCTaGTGTAACTCCTCCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSARQSMI*CNSSCI Trigger: AATGCAGGAGGAGTTACAGCAGATCATTGATTGCCT...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCCTGCTGTCTGGAGACTaGCCGTTCACATTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NFTVQDTHRVTSLIQASFLLSGD*PFTFQV Trigger: AACTTGGAATGTGAACGGCCAGTCTCCAGACAGCAG...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACCGGAAAACATTTCTATaGCACCTTGGAAGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDRKTFL*HLGSWE Trigger: TTCCCAGCTTCCAAGGTGCCATAGAAATGTTTTCCG...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CAA 72 bp | GTCAAGGAGTCAAGGGCAGTCTTTTTAAGTCTTTGCTaGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VKESRAVFLSLC*KEADVELRVSP Trigger: AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGACTGCCCTTGACTCCTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATCGGCCAGGTGCGAATTaGCAATGCAGAAAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHRPGAN*QCRKWC Trigger: ACACCACTTTCTGCATTGTCAATTCGCACCTGGCCG...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | TGCCATTCTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAACGTGGGCGGCCAGGTaGGAATTGACAATGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CHSCGRGGGNIQWNLNMQTWAAR*ELTMQK Trigger: TTTCTGCATTGTCAATTCGCACCTGGCCGCCCACGT...TTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAGAATGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACGTCCTCCTGGTGACATaGATATTTGAACAAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDVLLVT*IFEQVI Trigger: GATCACTTGTTCAAATATGCATGTCACCAGGAGGAC...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCATGGTATTGGTCACTTTaGGCTGTTCTTTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAWYWSL*AVLCLK Trigger: CTTCAAACAAAGAACAGCCCAAAGTGACCAATACCA...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTACAAGGCGGACCAGTTaGACTTTTCTATACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPTRRTS*TFLYLA Trigger: GGCCAAGTATAGAAAAGTTCAACTGGTCCGCCTTGT...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTCAACATCATGCTTCATaGTGTTCACTTGCGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPQHHAS*CSLAGQ Trigger: CTGTCCCGCAAGTGAACATCATGAAGCATGATGTTG...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCGCATATTTGAACAAGTaGTCTACTAGAAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFAYLNK*STRSQI Trigger: GATCTGGCTTCTAGTAGATCACTTGTTCAAATATGC...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGAACAAGTCCTCCTGGTaGCATGCATATTTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DTHRVTSLIQASFKVRAWNKSSW*HAYLNK Trigger: CTTGTTCAAATATGCATGTCACCAGGAGGACTTGTT...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTAACGTGGGCGGCCAGGTaGGAATTGACAATGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERVGPKCIIQRTVDKSELTWAAR*ELTMQK Trigger: TTTCTGCATTGTCAATTCGCACCTGGCCGCCCACGT...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCCACTGGCATCAGGCATaGAAAGTCTGTAGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFTVQDTHRVTSLIQASFHWHQA*KVCSSS Trigger: ACTTGAACTACAGACTTTGCATGCCTGATGCCAGTG...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGGAATTGTCTCAGGAATaGTGGTATCCAGGCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: DTHRVTSLIQASFKVRAWELSQE*WYPGNQ Trigger: TTGATTGCCTGGATACCAGCATTCCTGAGACAATTC...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATCTGCTGTCTGGAGACTaGCCGTTCACATTCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHLLSGD*PFTFQV Trigger: AACTTGGAATGTGAACGGCCAGTCTCCAGACAGCAG...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTATGCTGGCGGTCATTTaGAGTCTGTCTTGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPMLAVI*SLSCHE Trigger: CTCATGACAAGACAGACTCCAAATGACCGCCAGCAT...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTACCAAGAGGAACTGGATaGCATGCTGGCGGTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERVGPKCIIQRTVDKSELPRGTG*HAGGHL Trigger: CAAATGACCGCCAGCATGCCATCCAGTTCCTCTTGG...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCGGGCTGTTCTTTGTTTaGAGCTTCCTTTTCACGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NHMETVNFTVQDTHRVTSGLFFV*SFLFTR Trigger: TCGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCC...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACGGTGACATGCATATTTaGACAAGTGATCTACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDGDMHI*TSDLLE Trigger: TTCTAGTAGATCACTTGTTCAAATATGCATGTCACC...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAGAGCTTCCAGGAAAATaGGCAGTGCTTCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLELPGK*AVLQPQ Trigger: CTGTGGCTGAAGCACTGCTCATTTTCCTGGAAGCTC...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCATGTTGTTCCTTTCCATaGAACTGGATTATTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSGFLVGEMGTNMQDCSACCSFP*NWIINS Trigger: TGAGTTAATAATCCAGTTGCATGGAAAGGAACAACA...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCTTCTCCTTTTGCAGCTaGCGAAACTTCACATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFTVQDTHRVTSLIQASFFSFCS*RNFTFS Trigger: TGAGAATGTGAAGTTTCGGCAGCTGCAAAAGGAGAA...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGTCAAGAAGTAATCTTTaGCTCGATCCAAATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTHRVTSLIQASFKVRAWSRSNL*LDPNGG Trigger: TCCTCCATTTGGATCGAGGCAAAGATTACTTCTTGA...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTATGCTGTAACTCCTCCTaGATTCCAGGGGTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ERVGPKCIIQRTVDKSELCCNSS*IPGVWN Trigger: GTTCCAAACCCCTGGAATGCAGGAGGAGTTACAGCA...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAGGCAATCAATGATCTaGTGTAACTCCTCCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: NFTVQDTHRVTSLIQASFRQSMI*CNSSCI Trigger: AATGCAGGAGGAGTTACAGCAGATCATTGATTGCCT...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGGAATTGTCTCAGGAATaGTGGTATCCAGGCAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLEELGMKRLRGRIGRIGELSQE*WYPGNQ Trigger: TTGATTGCCTGGATACCAGCATTCCTGAGACAATTC...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTAATATCAGGAGGATTTaGATCACAGTCGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPNIRRI*ITVEPR Trigger: CCTTGGCTCGACTGTGATCCAAATCCTCCTGATATT...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATGCGGGACAGTCTGATTaGGGACTGAAAAAGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHAGQSD*GLKKSF Trigger: GAATGACTTTTTCAGTCCCCAATCAGACTGTCCCGC...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCGACTTTTCACCTCACTaGCATCAGGCATGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHMETVNFTVQDTHRVTSDFSPH*HQACKV Trigger: GACTTTGCATGCCTGATGCCAGTGAGGTGAAAAGTC...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATGACTTTTCACCTCACTaGCATCAGGCATGCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHDFSPH*HQACKV Trigger: GACTTTGCATGCCTGATGCCAGTGAGGTGAAAAGTC...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCGGCATTTCCCACTaGAATCCCATCTGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHMETVNFTVQDTHRVTSLGISH*NPICQF Trigger: AAACTGACAGATGGGATTCCAGTGGGAAATGCCGAG...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTCATGGCTTGCAGTATTaGCTGTCATTAAGCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPHGLQY*LSLSLG Trigger: CCCTAAGCTTAATGACAGCCAATACTGCAAGCCATG...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATGGTTCCAAAGCAACTTaGGAGGTAATTCCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHGSKAT*EVIPTD Trigger: ATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACC...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTATTTCTATGGCACCTTaGAAGCTGGGAAATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPISMAP*KLGNDL Trigger: CAGGTCATTTCCCAGCTTCCAAGGTGCCATAGAAAT...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCTCTGATATGAGAATGCTTAGGGACAATTTCCAGGGACCACAGTTAAGTACAAGGCGGACCAGTTaGACTTTTCTATACTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EASDMRMLRDNFQGPQLSTRRTS*TFLYLA Trigger: GGCCAAGTATAGAAAAGTTCAACTGGTCCGCCTTGT...ACTTAACTGTGGTCCCTGGAAATTGTCCCTAAGCATTCTCATATCAGAGGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCGCATATTTGAACAAGTaGTCTACTAGAAGCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NFTVQDTHRVTSLIQASFAYLNK*STRSQI Trigger: GATCTGGCTTCTAGTAGATCACTTGTTCAAATATGC...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCTATCCAGGCAATCAATaGTCTGCTGTAACTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NHMETVNFTVQDTHRVTSYPGNQ*SAVTPP Trigger: AGGAGGAGTTACAGCAGATCATTGATTGCCTGGATA...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCACAAAGTGGCGCTCTCTaGTCCAGTCTCCCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPQSGAL*SSLPVP Trigger: GGGTACAGGGAGACTGGACCAGAGAGCGCCACTTTG...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | CAGATGTGTCGATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGCAAAGTGGCGCTCTCTaGTCCAGTCTCCCTGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: QMCRCCSYILSILQDTLQQSGAL*SSLPVP Trigger: GGGTACAGGGAGACTGGACCAGAGAGCGCCACTTTG...CTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCGGGATGAAAGAAAAATaGCAGGGAACCTGTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NHMETVNFTVQDTHRVTSGMKEK*QGTCPL Trigger: CAATGGACAGGTTCCCTGCCATTTTTCTTTCATCCC...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTAATGCTGGCGGTCATTTaGAGTCTGTCTTGTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERVGPKCIIQRTVDKSELMLAVI*SLSCHE Trigger: CTCATGACAAGACAGACTCCAAATGACCGCCAGCAT...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTAGCTTCAGCCACAGAATaGTTATTGCCAGGAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERVGPKCIIQRTVDKSELASATE*LLPGIV Trigger: GACAATTCCTGGCAATAACCATTCTGTGGCTGAAGC...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCTCTGATATGAGAATGCTTAGGGACAATTTCCAGGGACCACAGTTAAGTAGTCTGATTGGGGACTaGAAAAGTCATTCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: EASDMRMLRDNFQGPQLSSLIGD*KSHSCT Trigger: TGTGCAAGAATGACTTTTTCAGTCCCCAATCAGACT...ACTTAACTGTGGTCCCTGGAAATTGTCCCTAAGCATTCTCATATCAGAGGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTTTTTTCTGTGTGCGCTaGATGTTTAACTGGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPFFCVR*MFNWSN Trigger: ATTTGACCAGTTAAACATTCAGCGCACACAGAAAAA...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | AAACCAAGCAAGTCAATTTCACCAGGCAGTTTTGCAGCCAGAAGCTGGCAGCTGGGTGACATGCATATTTaGACAAGTGATCTACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPSKSISPGSFAARSWQLGDMHI*TSDLLE Trigger: TTCTAGTAGATCACTTGTTCAAATATGCATGTCACC...CAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCACAGCTCATAACAGATaGCTGGCTCTGGCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPTAHNR*LALAEL Trigger: AAGCTCTGCCAGAGCCAGTCATCTGTTATGAGCTGT...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTCAATCATGTTGGTGTTaGTATTGTTGTAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPQSCWC*YCCSQR Trigger: TCTCTGACTACAACAATATCAACACCAACATGATTG...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | TGCCATTCTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGCTCTTGGAATCCAATaGAGTAAATATCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CHSCGRGGGNIQWNLNMQALGIQ*SKYQED Trigger: ATCCTCCTGATATTTACTGCATTGGATTCCAAGAGC...TTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAGAATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAGAGTTCACGAAGGAATaGCATCAAGTAGCGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLEFTKE*HQVAEN Trigger: GTTTTCCGCTACTTGATGGCATTCCTTCGTGAACTC...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | AAACCAAGCAAGTCAATTTCACCAGGCAGTTTTGCAGCCAGAAGCTGGCAGCTGTCCTTTCCATGCAACTaGATTATTAACTCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSKSISPGSFAARSWQLSFPCN*IINSYC Trigger: GCAGTATGAGTTAATAATCCAGTTGCATGGAAAGGA...CAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTCAGAAAGTGGTGTTGTaGAATACAAATCTTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPQKVVL*NTNLTA Trigger: AGCTGTAAGATTTGTATTCCACAACACCACTTTCTG...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATTTGCCTCGATCCAAATaGAGGACAAGAATATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHLPRSK*RTRISS Trigger: TGAAGATATTCTTGTCCTCCATTTGGATCGAGGCAA...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGGGTTCCAAAGCAACTTaGGAGGTAATTCCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLGSKAT*EVIPTD Trigger: ATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACC...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAGAAGGGGTCGCTCACTaGTACCTTCATCCAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPEGVAH*YLHPRV Trigger: TACCCTTGGATGAAGGTACCAGTGAGCGACCCCTTC...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCAGAAGCCAGATCTCTTTaGGGACTTGAAGGGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EDARCSLSLPVKPEILNSEARSL*GLEGVA Trigger: AGCGACCCCTTCAAGTCCCCAAAGAGATCTGGCTTC...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGAAGCTTCGAGGACCTCTaGGAGGAACTTCAAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRSFEDL*EELQTA Trigger: CGCTGTTTGAAGTTCCTCTCAGAGGTCCTCGAAGCT...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGCCTGTCCATTGTTGCTaGTCTGGAACTTCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLPVHCC*SGTSPF Trigger: AAAAGGAGAAGTTCCAGATCAGCAACAATGGACAGG...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACAAGTCCTCCTGGTaGCATGCATATTTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLNKSSW*HAYLNK Trigger: CTTGTTCAAATATGCATGTCACCAGGAGGACTTGTT...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGAGAGCTTCCAGGAAAATaGGCAGTGCTTCAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRELPGK*AVLQPQ Trigger: CTGTGGCTGAAGCACTGCTCATTTTCCTGGAAGCTC...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCGAGTCTGTCTTGTCATaGGGTTTGGTGGAGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPESVLS*GLVEVL Trigger: TAAGACCTCCACCAAACCTCATGACAAGACAGACTC...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTCAAAAGAGTTTCTTCTaGTTCTTGAACACATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFLSLCLKEADVELRVSPQKSFF*FLNTSE Trigger: TTCAGATGTGTTCAAGAAGCAGAAGAAACTCTTTTG...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTACCACAGAATGGTTATTaGCAGGAATTGTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLPQNGY*QELSQE Trigger: TTCCTGAGACAATTCCTGGCAATAACCATTCTGTGG...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATTCCTTTCCATGCAACTaGATTATTAACTCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHSFPCN*IINSYC Trigger: GCAGTATGAGTTAATAATCCAGTTGCATGGAAAGGA...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATCAGAAAGTGGTGTTGTaGAATACAAATCTTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHQKVVL*NTNLTA Trigger: AGCTGTAAGATTTGTATTCCACAACACCACTTTCTG...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGTGTCGATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGACCTTCACCCCAATATaGAACAGGGCGCTAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QMCRCCSYILSILQDTLQTFTPI*NRALTG Trigger: ACCTGTTAGCGCCCTGTTCCATATTGGGGTGAAGGT...CTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGGCTTCAGCCACAGAATaGTTATTGCCAGGAATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLASATE*LLPGIV Trigger: GACAATTCCTGGCAATAACCATTCTGTGGCTGAAGC...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGAGCTTCGAGGACCTCTaGGAGGAACTTCAAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLSFEDL*EELQTA Trigger: CGCTGTTTGAAGTTCCTCTCAGAGGTCCTCGAAGCT...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATTGGAACAAGAAGCTGTaGCTGAGCTTCCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTYRVSITSQMCRCCSYWNKKL*LSFLSF Trigger: GAAGCTCAGGAAGCTCAGTCACAGCTTCTTGTTCCA...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | CAGATGTGTCGATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGCTCGGCATTTCCCACTaGAATCCCATCTGTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QMCRCCSYILSILQDTLQLGISH*NPICQF Trigger: AAACTGACAGATGGGATTCCAGTGGGAAATGCCGAG...CTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGGGTAATTCCCACCGATaGTCAAGAAGTAATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NHFFPKMLGAVFHYQLNLGNSHR*SRSNLC Trigger: GCAAAGATTACTTCTTGACCATCGGTGGGAATTACC...CAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTGAAGCCAGATCTCTTTaGGGACTTGAAGGGGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKMKTLESFQVEEVMCVAEARSL*GLEGVA Trigger: AGCGACCCCTTCAAGTCCCCAAAGAGATCTGGCTTC...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCCGGAAAACATTTCTATaGCACCTTGGAAGCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPRKTFL*HLGSWE Trigger: TTCCCAGCTTCCAAGGTGCCATAGAAATGTTTTCCG...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGAAACTGGATGGCATGCTaGCGGTCATTTGGAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRNWMAC*RSFGVC Trigger: ACAGACTCCAAATGACCGCCAGCATGCCATCCAGTT...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| 3UTR CAA 72 bp | ATGTTAATAGGCAAGAATGACACGACTTGGGTTGGTTaGGTGAATGAAACCAAGCAAGTCAATTTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLIGKNDTTWVG*VNETKQVNFTR Trigger: CCTGGTGAAATTGACTTGCTTGGTTTCATTCACCAAACCAACCCAAGTCGTGTCATTCTTGCCTATTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCGGGCTGTTCTTTGTTTaGAGCTTCCTTTTCACGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AVVRMLIYHLSQGPSLILGLFFV*SFLFTR Trigger: TCGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCC...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCCAACATCATGCTTCATaGTGTTCACTTGCGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVVRMLIYHLSQGPSLILQHHAS*CSLAGQ Trigger: CTGTCCCGCAAGTGAACATCATGAAGCATGATGTTG...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGCCTGTCCATTGTTGCTaGTCTGGAACTTCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MLFLYFEHTSRYLAGHQWPVHCC*SGTSPF Trigger: AAAAGGAGAAGTTCCAGATCAGCAACAATGGACAGG...CCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCACCTGTACCCGAATTTTaGAGCCACTGTTTGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EDARCSLSLPVKPEILNSPVPEF*SHCLKQ Trigger: TTGCTTCAAACAGTGGCTGCAAAATTCGGGTACAGG...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTTGCTGTAACTCCTCCTaGATTCCAGGGGTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKMKTLESFQVEEVMCVACCNSS*IPGVWN Trigger: GTTCCAAACCCCTGGAATGCAGGAGGAGTTACAGCA...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR GCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCCCACAGAATGGTTATTaGCAGGAATTGTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPPQNGY*QELSQE Trigger: TTCCTGAGACAATTCCTGGCAATAACCATTCTGTGG...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | CTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGTTATTAGGAGCTTCCGCATGGTATTaGTCACTTTGGGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFEHTSRYLAGHQWLLGASAWY*SLWAVL Trigger: AAGAACAGCCCAAAGTGACCAATACCATGCGGAAGC...TCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAATTTCTATGGCACCTTaGAAGCTGGGAAATGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPISMAP*KLGNDL Trigger: CAGGTCATTTCCCAGCTTCCAAGGTGCCATAGAAAT...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGTCTGATTGGGGACTaGAAAAGTCATTCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPSLIGD*KSHSCT Trigger: TGTGCAAGAATGACTTTTTCAGTCCCCAATCAGACT...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCATTACAGAGTCTTTGCTaGCGTATACATCAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPLQSLC*RIHQGR Trigger: TCTCCCTTGATGTATACGTCAGCAAAGACTCTGTAA...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATCACTGGCATCAGGCATaGAAAGTCTGTAGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTYRVSITSQMCRCCSYHWHQA*KVCSSS Trigger: ACTTGAACTACAGACTTTGCATGCCTGATGCCAGTG...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTGCTTCCGCATGGTATTaGTCACTTTGGGCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKMKTLESFQVEEVMCVAASAWY*SLWAVL Trigger: AAGAACAGCCCAAAGTGACCAATACCATGCGGAAGC...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | CTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGTTATTAGGACAAATAGCTTCCGCATaGTATTGGTCACTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYFEHTSRYLAGHQWLLGQIASA*YWSLWA Trigger: AGCCCAAAGTGACCAATACCATGCGGAAGCTATTTG...TCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATAATATCAGGAGGATTTaGATCACAGTCGAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTYRVSITSQMCRCCSYNIRRI*ITVEPR Trigger: CCTTGGCTCGACTGTGATCCAAATCCTCCTGATATT...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATGGGATGAAAGAAAAATaGCAGGGAACCTGTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSTYRVSITSQMCRCCSYGMKEK*QGTCPL Trigger: CAATGGACAGGTTCCCTGCCATTTTTCTTTCATCCC...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTTCCATCGGATCTGTTTTGTATCCCTTTCCTAGAGATTGTCTAAAACCCAGGAACTTCTCGAATTaGTCTTTTCATTCGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSIGSVLYPFPRDCLKPRNFSN*SFHSAQ Trigger: TTGTGCCGAATGAAAAGACCAATTCGAGAAGTTCCT...GGGTTTTAGACAATCTCTAGGAAAGGGATACAAAACAGATCCGATGGAAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR TCA 90 bp | CTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGTTATTAGGATTACAGAGTCTTTGCTaGCGTATACATCAAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYFEHTSRYLAGHQWLLGLQSLC*RIHQGR Trigger: TCTCCCTTGATGTATACGTCAGCAAAGACTCTGTAA...TCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATTTCTCCTTTTGCAGCTaGCGAAACTTCACATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTYRVSITSQMCRCCSYFSFCS*RNFTFS Trigger: TGAGAATGTGAAGTTTCGGCAGCTGCAAAAGGAGAA...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | CAGATGTGTCGATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGTCAAGAAGTAATCTTTaGCTCGATCCAAATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMCRCCSYILSILQDTLQSRSNL*LDPNGG Trigger: TCCTCCATTTGGATCGAGGCAAAGATTACTTCTTGA...CTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTCAAATAGCTTCCGCATaGTATTGGTCACTTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKMKTLESFQVEEVMCVAQIASA*YWSLWA Trigger: AGCCCAAAGTGACCAATACCATGCGGAAGCTATTTG...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGCATGGCTTGCAGTATTaGCTGTCATTAAGCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLHGLQY*LSLSLG Trigger: CCCTAAGCTTAATGACAGCCAATACTGCAAGCCATG...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCGGTAATTCCCACCGATaGTCAAGAAGTAATCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AVVRMLIYHLSQGPSLILGNSHR*SRSNLC Trigger: GCAAAGATTACTTCTTGACCATCGGTGGGAATTACC...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGAGCTCTTGGAATCCAATaGAGTAAATATCAGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRALGIQ*SKYQED Trigger: ATCCTCCTGATATTTACTGCATTGGATTCCAAGAGC...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAATAGTGTCTAATTTCTaGTACCAGCTAGATGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPIVSNF*YQLDES Trigger: AGACTCATCTAGCTGGTACCAGAAATTAGACACTAT...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CCA 90 bp | CTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGTTATTAGGAAGGAACTTCTCGAATTaGTCTTTTCATTCGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LYFEHTSRYLAGHQWLLGRNFSN*SFHSAQ Trigger: TTGTGCCGAATGAAAAGACCAATTCGAGAAGTTCCT...TCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCTTTTTCTGTGTGCGCTaGATGTTTAACTGGTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AVVRMLIYHLSQGPSLILFFCVR*MFNWSN Trigger: ATTTGACCAGTTAAACATTCAGCGCACACAGAAAAA...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR TCA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGACAATCATGTTGGTGTTaGTATTGTTGTAGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRQSCWC*YCCSQR Trigger: TCTCTGACTACAACAATATCAACACCAACATGATTG...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CCA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGTGGTATTGGTCACTTTaGGCTGTTCTTTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLWYWSL*AVLCLK Trigger: CTTCAAACAAAGAACAGCCCAAAGTGACCAATACCA...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTTTGCCTCGATCCAAATaGAGGACAAGAATATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKMKTLESFQVEEVMCVALPRSK*RTRISS Trigger: TGAAGATATTCTTGTCCTCCATTTGGATCGAGGCAA...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATTGTTGTTCCTTTCCATaGAACTGGATTATTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTYRVSITSQMCRCCSYCCSFP*NWIINS Trigger: TGAGTTAATAATCCAGTTGCATGGAAAGGAACAACA...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCCAAAAGAGTTTCTTCTaGTTCTTGAACACATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVVRMLIYHLSQGPSLILQKSFF*FLNTSE Trigger: TTCAGATGTGTTCAAGAAGCAGAAGAAACTCTTTTG...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR GCA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTCAAATGACAACATCATaGTTCATGATGTTCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKMKTLESFQVEEVMCVAQMTTS*FMMFTC Trigger: GCAAGTGAACATCATGAAGCATGATGTTGTCATTTG...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR GCA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGCAAATGACAACATCATaGTTCATGATGTTCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLQMTTS*FMMFTC Trigger: GCAAGTGAACATCATGAAGCATGATGTTGTCATTTG...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| 3UTR CAA 72 bp | ATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTaGTTCCTATATTTTGAGCATACTTCAAGATACCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQSINNVSDVSM*FLYFEHTSRYL Trigger: AAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCACTGCATTCCAGGGGTTaGGAACAAGTCCTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGFLVGEMGTNMQDCSALHSRG*EQVLLV Trigger: CACCAGGAGGACTTGTTCCAAACCCCTGGAATGCAG...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS GCA 90 bp | ATGGGTGAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: MGEGWRDGSAVKSTD*SSRGPEFNSQQPHG Trigger: ACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTCACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154732.2 |
||
| CDS CCA 90 bp | TCCTCGTTCCCAAGCAGGAAGACCAAGAGGAACTGGATGGCATGCTaGCGGTCATTTGGAGTCTGTCTTGTCATGAGGTTTGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSFPSRKTKRNWMAC*RSFGVCLVMRFGGG Trigger: ACCTCCACCAAACCTCATGACAAGACAGACTCCAAATGACCGCCAGCATGCCATCCAGTTCCTCTTGGTCTTCCTGCTTGGGAACGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS CCA 90 bp | CATGGTGGCTCACAACCATCTGTAATGGGATCCGACGGCCTCTTCTaGTGTGTCCCAATATGGAACAGGGCGCTAACAGGTTTGTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HGGSQPSVMGSDGLF*CVPIWNRALTGLWS Trigger: TGACCACAAACCTGTTAGCGCCCTGTTCCATATTGGGACACACCAGAAGAGGCCGTCGGATCCCATTACAGATGGTTGTGAGCCACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154732.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCAGCCAAGGACCACTCTaGCTCTTTCACAGACTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFSQGPL*LFHRLE Trigger: TTCGAGTCTGTGAAAGAGCAAGAGTGGTCCTTGGCT...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCGATCTCTTTGGGGACTaGAAGGGGTCGCTCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NFTVQDTHRVTSLIQASFDLFGD*KGSLTG Trigger: ACCAGTGAGCGACCCCTTCAAGTCCCCAAAGAGATC...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGCTGCATTCCAGGGGTTaGGAACAAGTCCTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLEELGMKRLRGRIGRIGLHSRG*EQVLLV Trigger: CACCAGGAGGACTTGTTCCAAACCCCTGGAATGCAG...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CAA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGCTGGAACTTCTCCTTTaGCAGCTGCCGAAACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DTHRVTSLIQASFKVRAWLELLL*QLPKLH Trigger: GTGAAGTTTCGGCAGCTGCAAAAGGAGAAGTTCCAG...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGGGTTTCTAGTGGGGGAGATGGGGACCAACATGCAGGATTGCTCCGCACAGGAACTTCTCGAATaGGTCTTTTCATTCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GSGFLVGEMGTNMQDCSAQELLE*VFSFGT Trigger: TGTGCCGAATGAAAAGACCAATTCGAGAAGTTCCTG...TGCGGAGCAATCCTGCATGTTGGTCCCCATCTCCCCCACTAGAAACCCACTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS CCA 90 bp | GCTGCCCGGTTTGGGTGTTCGGGACAAATAGCTTCCGCATGGTATTaGTCACTTTGGGCTGTTCTTTGTTTGAAGCTTCCTTTTCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: AARFGCSGQIASAWY*SLWAVLCLKLPFHA Trigger: CGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAACCGGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 90 bp | CCATCTGTAATGGGATCCGACGGCCTCTTCTGGTGTGTCCCAATATaGAACAGGGCGCTAACAGGTTTGTGGTCACTAGTTTTGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSVMGSDGLFWCVPI*NRALTGLWSLVLSS Trigger: GGAACTCAAAACTAGTGACCACAAACCTGTTAGCGCCCTGTTCCATATTGGGACACACCAGAAGAGGCCGTCGGATCCCATTACAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154732.2 |
||
| CDS-3UTR CAA 90 bp | GACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAAAGTGAGAGCATGGTGGGCTGTTCTTTGTTaGAAGCTTCCTTTTCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: DTHRVTSLIQASFKVRAWWAVLC*KLPFHA Trigger: CGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCA...CCATGCTCTCACTTTGAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCGGAACCTGTCCATTGTaGCTGATCTGGAACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NFTVQDTHRVTSLIQASFGTCPL*LIWNFS Trigger: GGAGAAGTTCCAGATCAGCAACAATGGACAGGTTCC...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCTGTCTAAGGTCTCGTTaGGCTCCAAGTAGCCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NFTVQDTHRVTSLIQASFCLRSR*APSSPQ Trigger: TTGAGGGCTACTTGGAGCCAAACGAGACCTTAGACA...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | GGGCGAGGAAAGCTCCTGGGACCTCACTTGAGGTGCACAGACTTCTCTTTTGACGGTTATTGCCAGGAATaGTCTCAGGAATGCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRGKLLGPHLRCTDFSFDGYCQE*SQECWY Trigger: ATACCAGCATTCCTGAGACAATTCCTGGCAATAACC...GTCAAAAGAGAAGTCTGTGCACCTCAAGTGAGGTCCCAGGAGCTTTCCTCGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS CCA 90 bp | CGCTTTGTGAGGATATGTTTAATGAGACCCTCTCGCTGCCCGGTTTaGGTGTTCGGGACAAATAGCTTCCGCATGGTATTGGTCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RFVRICLMRPSRCPV*VFGTNSFRMVLVTL Trigger: CAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAACCGGGCAGCGAGAGGGTCTCATTAAACATATCCTCACAAAGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCCACAAGGCGGACCAGTaGAACTTTTCTATACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NFTVQDTHRVTSLIQASFHKADQ*NFSILG Trigger: GCCAAGTATAGAAAAGTTCAACTGGTCCGCCTTGTG...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | AAACCAAGCAAGTCAATTTCACCAGGCAGTTTTGCAGCCAGAAGCTGGCAGCTGCTTCATGATGTTCACTaGCGGGACAGTCTGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPSKSISPGSFAARSWQLLHDVH*RDSLIG Trigger: CCCAATCAGACTGTCCCGCAAGTGAACATCATGAAG...CAGCTGCCAGCTTCTGGCTGCAAAACTGCCTGGTGAAATTGACTTGCTTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCAGGGCGCTAACAGGTTaGTGGTCACTAGTTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NFTVQDTHRVTSLIQASFRALTG*WSLVLS Trigger: ACTCAAAACTAGTGACCACAAACCTGTTAGCGCCCT...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTAGATCTCTTTGGGGACTaGAAGGGGTCGCTCACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ERVGPKCIIQRTVDKSELDLFGD*KGSLTG Trigger: ACCAGTGAGCGACCCCTTCAAGTCCCCAAAGAGATC...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS GCA 90 bp | TCTTTCTCTCGCTTTGTGAGGATATGTTTAATGAGACCCTCTCGCTaGCCGGTTTGGGTGTTCGGGACAAATAGCTTCCGCATGGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: SFSRFVRICLMRPSR*PVWVFGTNSFRMVL Trigger: CAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAACCGGGCAGCGAGAGGGTCTCATTAAACATATCCTCACAAAGCGAGAGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 90 bp | TCTGAGAGGAACTTCAAACAGCGTTCTTCATCAGGAATTTCAAAGTaGCGCTCTCTGGTCCAGTCTCCCTGTACCCGAATTTTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SERNFKQRSSSGISK*RSLVQSPCTRILQP Trigger: TGGCTGCAAAATTCGGGTACAGGGAGACTGGACCAGAGAGCGCCACTTTGAAATTCCTGATGAAGAACGCTGTTTGAAGTTCCTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTGGATAGTAGCCGGGCACGGGGACTGGGAAGCAGGGATGTTTTCATTCGATATCTTGAACATGTaGTTCCTTTCCATGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: QVWIVAGHGDWEAGMFSFDILNM*FLSMQL Trigger: CAGTTGCATGGAAAGGAACAACATGTTCAAGATATC...GAATGAAAACATCCCTGCTTCCCAGTCCCCGTGCCCGGCTACTATCCACACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | AATCACATGGAGACAGTGAACTTCACTGTTCAGGACACCCACAGAGTCACTAGCAGCTTCCGCATGGTATaGGTCACTTTGGGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NHMETVNFTVQDTHRVTSSFRMV*VTLGCS Trigger: AGAACAGCCCAAAGTGACCAATACCATGCGGAAGCT...GCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTTCACTGTCTCCATGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATGGAACCTGTCCATTGTaGCTGATCTGGAACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHGTCPL*LIWNFS Trigger: GGAGAAGTTCCAGATCAGCAACAATGGACAGGTTCC...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATGCTCGAAGCCATGGCTaGCAGTATTGGCTGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHARSHG*QYWLSL Trigger: TAATGACAGCCAATACTGCAAGCCATGGCTTCGAGC...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATTCTTGTGGGAGAGGTGGTGGTAATATCCAGTGGAACCTGAACATGCAATGTCTAAGGTCTCGTTaGGCTCCAAGTAGCCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CHSCGRGGGNIQWNLNMQCLRSR*APSSPQ Trigger: TTGAGGGCTACTTGGAGCCAAACGAGACCTTAGACA...TTGCATGTTCAGGTTCCACTGGATATTACCACCACCTCTCCCACAAGAATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTGGAGGAATTAGGAATGAAGAGGTTGAGGGGCAGGATAGGCAGGATAGGGGGTTATTGCCAGGAATaGTCTCAGGAATGCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TLEELGMKRLRGRIGRIGGYCQE*SQECWY Trigger: ATACCAGCATTCCTGAGACAATTCCTGGCAATAACC...CCCTATCCTGCCTATCCTGCCCCTCAACCTCTTCATTCCTAATTCCTCCAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS CCA 90 bp | ACTTCAAACAGCGTTCTTCATCAGGAATTTCAAAGTGGCGCTCTCTaGTCCAGTCTCCCTGTACCCGAATTTTGCAGCCACTGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSNSVLHQEFQSGAL*SSLPVPEFCSHCLK Trigger: CTTCAAACAGTGGCTGCAAAATTCGGGTACAGGGAGACTGGACCAGAGAGCGCCACTTTGAAATTCCTGATGAAGAACGCTGTTTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 90 bp | ACGTGGGCGGCCAGGTGCGAATTGACAATGCAGAAAGTGGTGTTGTaGAATACAAATCTTACAGCTACCCCACCTTTGTTTCCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TWAARCELTMQKVVL*NTNLTATPPLFPIF Trigger: GAAAATGGGAAACAAAGGTGGGGTAGCTGTAAGATTTGTATTCCACAACACCACTTTCTGCATTGTCAATTCGCACCTGGCCGCCCACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS-3UTR CAA 90 bp | GGTGGTGGTAATATCCAGTGGAACCTGAACATGCAAGTGGCACCACGAATTCATTGGGCTGTTCTTTGTTaGAAGCTTCCTTTTCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGGNIQWNLNMQVAPRIHWAVLC*KLPFHA Trigger: CGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCA...ATGAATTCGTGGTGCCACTTGCATGTTCAGGTTCCACTGGATATTACCACCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTTTTAAGTCTTTGCTTGAAGGAGGCGGATGTGGAGCTCAGAGTGAGCCCTAAATATCAGGAGGATTaGGATCACAGTCGAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VFLSLCLKEADVELRVSPKYQED*DHSRAK Trigger: CTTGGCTCGACTGTGATCCAAATCCTCCTGATATTT...AGGGCTCACTCTGAGCTCCACATCCGCCTCCTTCAAGCAAAGACTTAAAAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTAGCTCGAAGCCATGGCTaGCAGTATTGGCTGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: ERVGPKCIIQRTVDKSELARSHG*QYWLSL Trigger: TAATGACAGCCAATACTGCAAGCCATGGCTTCGAGC...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS TCA 90 bp | AGGAACTTCTCGAATTGGTCTTTTCATTCGGCACAAAGCCTCCAATaGGGTTCCAAAGCAACTTGGGAGGTAATTCCCACCGATGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RNFSNWSFHSAQSLQ*GSKATWEVIPTDGQ Trigger: TTGACCATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCTCATTGGAGGCTTTGTGCCGAATGAAAAGACCAATTCGAGAAGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 90 bp | CTCGTTTGGCTCCAAGTAGCCCTCAAAAGGTTCAGCTCGAAGCCATaGCTTGCAGTATTGGCTGTCATTAAGCTTAGGGATGAAAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVWLQVALKRFSSKP*LAVLAVIKLRDERK Trigger: TTTTCTTTCATCCCTAAGCTTAATGACAGCCAATACTGCAAGCCATGGCTTCGAGCTGAACCTTTTGAGGGCTACTTGGAGCCAAACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CCA 90 bp | CCTCCAATGAGGTTCCAAAGCAACTTGGGAGGTAATTCCCACCGATaGTCAAGAAGTAATCTTTGCCTCGATCCAAATGGAGGACAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPMRFQSNLGGNSHR*SRSNLCLDPNGGQE Trigger: TTCTTGTCCTCCATTTGGATCGAGGCAAAGATTACTTCTTGACCATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCTCATTGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS-3UTR CAA 90 bp | GAGGCCTCTGATATGAGAATGCTTAGGGACAATTTCCAGGGACCACAGTTAAGTCACAAGGCGGACCAGTaGAACTTTTCTATACTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EASDMRMLRDNFQGPQLSHKADQ*NFSILG Trigger: GCCAAGTATAGAAAAGTTCAACTGGTCCGCCTTGTG...ACTTAACTGTGGTCCCTGGAAATTGTCCCTAAGCATTCTCATATCAGAGGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
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| CDS-3UTR CAA 90 bp | GAGAGGGTGGGTCCAAAGTGCATCATACAAAGAACTGTAGACAAGTCTGAGCTACCATGGCTTGCAGTATaGGCTGTCATTAAGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERVGPKCIIQRTVDKSELPWLAV*AVIKLR Trigger: CCTAAGCTTAATGACAGCCAATACTGCAAGCCATGG...TAGCTCAGACTTGTCTACAGTTCTTTGTATGATGCACTTTGGACCCACCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
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| CDS-3UTR CAA 90 bp | GAGGCCTCTGATATGAGAATGCTTAGGGACAATTTCCAGGGACCACAGTTAAGTTCCAGGTCTATGAGTTaGGTGACAGGAACTTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: EASDMRMLRDNFQGPQLSSRSMS*VTGTSR Trigger: TCGAGAAGTTCCTGTCACCAAACTCATAGACCTGGA...ACTTAACTGTGGTCCCTGGAAATTGTCCCTAAGCATTCTCATATCAGAGGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS TCA 90 bp | CAATCTTATCTTCACCGGAGTTCAGGATGGTTACAGAGTCTTTGCTaGCGTATACATCAAGGGAGATGTCTAAGGTCTCGTTTGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSYLHRSSGWLQSLC*RIHQGRCLRSRLAP Trigger: TGGAGCCAAACGAGACCTTAGACATCTCCCTTGATGTATACGTCAGCAAAGACTCTGTAACCATCCTGAACTCCGGTGAAGATAAGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS GCA 90 bp | AAATATCAGGAGGATTTGGATCACAGTCGAGCCAAGGTTCTAAGCTaGTGTCTGGAGACTGGCCGTTCACATTCCAAGTTCCAACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KYQEDLDHSRAKVLS*CLETGRSHSKFQQK Trigger: TTTTTGTTGGAACTTGGAATGTGAACGGCCAGTCTCCAGACAGCAGCTTAGAACCTTGGCTCGACTGTGATCCAAATCCTCCTGATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 90 bp | TTTGGGTGTTCGGGACAAATAGCTTCCGCATGGTATTGGTCACTTTaGGCTGTTCTTTGTTTGAAGCTTCCTTTTCACGCGAAAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: FGCSGQIASAWYWSL*AVLCLKLPFHAKAF Trigger: GAATGCTTTCGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS-3UTR CAA 90 bp | AACTTCACTGTTCAGGACACCCACAGAGTCACTAGCCTCATCCAGGCTTCCTTCATGCAGAAAGTGGTGTaGTGGAATACAAATCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: NFTVQDTHRVTSLIQASFMQKVV*WNTNLT Trigger: TGTAAGATTTGTATTCCACAACACCACTTTCTGCAT...GAAGGAAGCCTGGATGAGGCTAGTGACTCTGTGGGTGTCCTGAACAGTGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
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| CDS-3UTR CAA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTATCCAGGTCTATGAGTTaGGTGACAGGAACTTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLSRSMS*VTGTSR Trigger: TCGAGAAGTTCCTGTCACCAAACTCATAGACCTGGA...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | GACTGGAATCATTTCTTCCCGAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAGCCACAGAATGGTTATaGCCAGGAATTGTCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DWNHFFPKMLGAVFHYQLATEWL*PGIVSG Trigger: TCCTGAGACAATTCCTGGCAATAACCATTCTGTGGC...TAACTGGTAGTGAAAGACTGCACCTAGCATCTTCGGGAAGAAATGATTCCAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| CDS CCA 90 bp | GGCTTGCAGTATTGGCTGTCATTAAGCTTAGGGATGAAAGAAAAATaGCAGGGAACCTGTCCATTGTTGCTGATCTGGAACTTCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLQYWLSLSLGMKEK*QGTCPLLLIWNFSF Trigger: AAAGGAGAAGTTCCAGATCAGCAACAATGGACAGGTTCCCTGCCATTTTTCTTTCATCCCTAAGCTTAATGACAGCCAATACTGCAAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS-3UTR CAA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGGTTCCAAAGCAACTaGGGAGGTAATTCCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPRFQSN*GGNSHR Trigger: TCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCT...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | CAGATGTGTCGATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGAGGTTCCAAAGCAACTaGGGAGGTAATTCCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: QMCRCCSYILSILQDTLQRFQSN*GGNSHR Trigger: TCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCT...CTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATAGCCAAGGACCACTCTaGCTCTTTCACAGACTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSTYRVSITSQMCRCCSYSQGPL*LFHRLE Trigger: TTCGAGTCTGTGAAAGAGCAAGAGTGGTCCTTGGCT...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCCTTCATGATGTTCACTaGCGGGACAGTCTGATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVRMLIYHLSQGPSLILLHDVH*RDSLIG Trigger: CCCAATCAGACTGTCCCGCAAGTGAACATCATGAAG...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGAGGGCGCTAACAGGTTaGTGGTCACTAGTTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: MLFLYFEHTSRYLAGHQWRALTG*WSLVLS Trigger: ACTCAAAACTAGTGACCACAAACCTGTTAGCGCCCT...CCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATCTGGAACTTCTCCTTTaGCAGCTGCCGAAACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTYRVSITSQMCRCCSYLELLL*QLPKLH Trigger: GTGAAGTTTCGGCAGCTGCAAAAGGAGAAGTTCCAG...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | CAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAAGACAGGGAACCTGTCCATaGTTGCTGATCTGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLFKGLTTAGYIPFVLPRQGTCP*LLIWNF Trigger: GAAGTTCCAGATCAGCAACAATGGACAGGTTCCCTG...TCTTGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS TCA 90 bp | ATCATGCTTCATGATGTTCACTTGCGGGACAGTCTGATTGGGGACTaGAAAAGTCATTCTTGCACAGATGTCTTTATAATCCTGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: IMLHDVHLRDSLIGD*KSHSCTDVFIILIP Trigger: AGGAATCAGGATTATAAAGACATCTGTGCAAGAATGACTTTTTCAGTCCCCAATCAGACTGTCCCGCAAGTGAACATCATGAAGCATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS GCA 90 bp | AGCAACTTGGGAGGTAATTCCCACCGATGGTCAAGAAGTAATCTTTaGCTCGATCCAAATGGAGGACAAGAATATCTTCAATCTTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNLGGNSHRWSRSNL*LDPNGGQEYLQSYL Trigger: AAGATAAGATTGAAGATATTCTTGTCCTCCATTTGGATCGAGGCAAAGATTACTTCTTGACCATCGGTGGGAATTACCTCCCAAGTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGAAATATCAGGAGGATTaGGATCACAGTCGAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MLFLYFEHTSRYLAGHQWKYQED*DHSRAK Trigger: CTTGGCTCGACTGTGATCCAAATCCTCCTGATATTT...CCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGCAGGGAACCTGTCCATaGTTGCTGATCTGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLQGTCP*LLIWNF Trigger: GAAGTTCCAGATCAGCAACAATGGACAGGTTCCCTG...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCTACATACAGAGTATCAATAACGTCTCAGATGTGTCGATGTTGTTCCTATCCATGGCTTGCAGTATaGGCTGTCATTAAGCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTYRVSITSQMCRCCSYPWLAV*AVIKLR Trigger: CCTAAGCTTAATGACAGCCAATACTGCAAGCCATGG...ATAGGAACAACATCGACACATCTGAGACGTTATTGATACTCTGTATGTAGAAGA 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GAAGATGCTAGGTGCAGTCTTTCACTACCAGTTAAACCTGAAATCCTTAATTCAAACATCTCGGATGTATaGACACTGATCTTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDARCSLSLPVKPEILNSNISDV*TLIFSG Trigger: GCCAGAAAAGATCAGTGTCAATACATCCGAGATGTT...TGAATTAAGGATTTCAGGTTTAACTGGTAGTGAAAGACTGCACCTAGCATCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS-3UTR CAA 90 bp | TCCCAATTATTTAAGGGCTTAACTACTGCAGGATACATACCTTTTGTTCTCCCAATGGTTACAGAGTCTTaGCTGACGTATACATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLFKGLTTAGYIPFVLPMVTES*LTYTSR Trigger: CCTTGATGTATACGTCAGCAAAGACTCTGTAACCAT...TGGGAGAACAAAAGGTATGTATCCTGCAGTAGTTAAGCCCTTAAATAATTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
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| CDS-3UTR CAA 90 bp | AATAAAATGAAAACCTTAGAGTCATTTCAAGTGGAAGAGGTAATGTGTGTGGCTGCCACAGAATGGTTATaGCCAGGAATTGTCTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NKMKTLESFQVEEVMCVAATEWL*PGIVSG Trigger: TCCTGAGACAATTCCTGGCAATAACCATTCTGTGGC...AGCCACACACATTACCTCTTCCACTTGAAATGACTCTAAGGTTTTCATTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS-3UTR CAA 90 bp | CTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGTTATTAGGAAACATCTCGGATGTATaGACACTGATCTTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYFEHTSRYLAGHQWLLGNISDV*TLIFSG Trigger: GCCAGAAAAGATCAGTGTCAATACATCCGAGATGTT...TCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
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| CDS-3UTR CAA 90 bp | GCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGATTCTCATGGTTACAGAGTCTTaGCTGACGTATACATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AVVRMLIYHLSQGPSLILMVTES*LTYTSR Trigger: CCTTGATGTATACGTCAGCAAAGACTCTGTAACCAT...GAGAATCAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | GATATAGCAGTTGTAAGAATGCTTATCTATCATCTATCACAAGGACCAAGTTTGCAGGAACTTCTCGAATaGGTCTTTTCATTCGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: DIAVVRMLIYHLSQGPSLQELLE*VFSFGT Trigger: TGTGCCGAATGAAAAGACCAATTCGAGAAGTTCCTG...CAAACTTGGTCCTTGTGATAGATGATAGATAAGCATTCTTACAACTGCTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | CTATATTTTGAGCATACTTCAAGATACCTTGCAGGACATCAGTGGTTATTAGGAGATATCTTGAACATGTaGTTCCTTTCCATGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LYFEHTSRYLAGHQWLLGDILNM*FLSMQL Trigger: CAGTTGCATGGAAAGGAACAACATGTTCAAGATATC...TCCTAATAACCACTGATGTCCTGCAAGGTATCTTGAAGTATGCTCAAAATATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS-3UTR CAA 90 bp | CAGATGTGTCGATGTTGTTCCTATATTTTGAGCATACTTCAAGATACCTTGCAGATGCAGAAAGTGGTGTaGTGGAATACAAATCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: QMCRCCSYILSILQDTLQMQKVV*WNTNLT Trigger: TGTAAGATTTGTATTCCACAACACCACTTTCTGCAT...CTGCAAGGTATCTTGAAGTATGCTCAAAATATAGGAACAACATCGACACATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115020.8 |
||
| CDS GCA 72 bp | CCGGAGGGGACCCTTCATCTCCAAACCCGCCACCATTaGCAGGGGCTGAGCTCCAATCGGGAGCCGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PEGTLHLQTRHH*QGLSSNREPRL Trigger: GAGCCGCGGCTCCCGATTGGAGCTCAGCCCCTGGCAATGGTGGCGGGTTTGGAGATGAAGGGTCCCCTCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CAA 72 bp | CCCGGAGGGGACCCTTCATCTCCAAACCCGCCACCATaGCCAGGGGCTGAGCTCCAATCGGGAGCCGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGGDPSSPNPPP*PGAELQSGAAA Trigger: AGCCGCGGCTCCCGATTGGAGCTCAGCCCCTGGCAATGGTGGCGGGTTTGGAGATGAAGGGTCCCCTCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 72 bp | GCCAGATCTCTTTGGGGACTTGAAGGGGTCGCTCACTaGTACCTTCATCCAAGGGTACCATCTGCAGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARSLWGLEGVAH*YLHPRVPSAEG Trigger: CCCTTCTGCAGATGGTACCCTTGGATGAAGGTACCAGTGAGCGACCCCTTCAAGTCCCCAAAGAGATCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001202.15 |
||
| CDS GCA 72 bp | GGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GWRDGSAVKSTD*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154732.2 |
||
| CDS CAA 90 bp | CTTGGCCTTCGAAGGCAGCCCCCTTTCCACAGCCAAGGACCACTCTaGCTCTTTCACAGACTCGAAGTAGAAAAAGGCTTCGGTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LGLRRQPPFHSQGPL*LFHRLEVEKGFGAQ Trigger: TTGAGCACCGAAGCCTTTTTCTACTTCGAGTCTGTGAAAGAGCAAGAGTGGTCCTTGGCTGTGGAAAGGGGGCTGCCTTCGAAGGCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS GCA 72 bp | CGCTTTGTGAGGATATGTTTAATGAGACCCTCTCGCTaGCCGGTTTGGGTGTTCGGGACAAATAGCTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RFVRICLMRPSR*PVWVFGTNSFR Trigger: GCGGAAGCTATTTGTCCCGAACACCCAAACCGGGCAGCGAGAGGGTCTCATTAAACATATCCTCACAAAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 72 bp | GACCAAGAGGAACTGGATGGCATGCTGGCGGTCATTTaGAGTCTGTCTTGTCATGAGGTTTGGTGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DQEELDGMLAVI*SLSCHEVWWRS Trigger: AGACCTCCACCAAACCTCATGACAAGACAGACTCCAAATGACCGCCAGCATGCCATCCAGTTCCTCTTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| CDS CCA 72 bp | ATGGGATCCGACGGCCTCTTCTGGTGTGTCCCAATATaGAACAGGGCGCTAACAGGTTTGTGGTCACTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: MGSDGLFWCVPI*NRALTGLWSLV Trigger: AACTAGTGACCACAAACCTGTTAGCGCCCTGTTCCATATTGGGACACACCAGAAGAGGCCGTCGGATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154732.2 |
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| CDS CCA 72 bp | TCCACAACCTTCACCATAAGATACATGGGTGAGGGCTaGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: STTFTIRYMGEG*RDGSAVKSTDC Trigger: GCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCTCACCCATGTATCTTATGGTGAAGGTTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154732.2 |
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| CDS CAA 72 bp | CGAAGGCAGCCCCCTTTCCACAGCCAAGGACCACTCTaGCTCTTTCACAGACTCGAAGTAGAAAAAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RRQPPFHSQGPL*LFHRLEVEKGF Trigger: GAAGCCTTTTTCTACTTCGAGTCTGTGAAAGAGCAAGAGTGGTCCTTGGCTGTGGAAAGGGGGCTGCCTTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 90 bp | CGCTGCCCGGTTTGGGTGTTCGGGACAAATAGCTTCCGCATGGTATaGGTCACTTTGGGCTGTTCTTTGTTTGAAGCTTCCTTTTCACGC | + |
|
Preference number: 6 (lower is better) Translates to: RCPVWVFGTNSFRMV*VTLGCSLFEASFSR Trigger: GCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAACCGGGCAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS GCA 72 bp | GAGGATTTGGATCACAGTCGAGCCAAGGTTCTAAGCTaGTGTCTGGAGACTGGCCGTTCACATTCCAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EDLDHSRAKVLS*CLETGRSHSKF Trigger: GAACTTGGAATGTGAACGGCCAGTCTCCAGACAGCAGCTTAGAACCTTGGCTCGACTGTGATCCAAATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 72 bp | AGCGTTCTTCATCAGGAATTTCAAAGTGGCGCTCTCTaGTCCAGTCTCCCTGTACCCGAATTTTGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVLHQEFQSGAL*SSLPVPEFCSH Trigger: GTGGCTGCAAAATTCGGGTACAGGGAGACTGGACCAGAGAGCGCCACTTTGAAATTCCTGATGAAGAACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 72 bp | AGGATATGTTTAATGAGACCCTCTCGCTGCCCGGTTTaGGTGTTCGGGACAAATAGCTTCCGCATGGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: RICLMRPSRCPV*VFGTNSFRMVL Trigger: CAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAACCGGGCAGCGAGAGGGTCTCATTAAACATATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 90 bp | TCCACGTGGGCGGCCAGGTGCGAATTGACAATGCAGAAAGTGGTGTaGTGGAATACAAATCTTACAGCTACCCCACCTTTGTTTCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: STWAARCELTMQKVV*WNTNLTATPPLFPI Trigger: AATGGGAAACAAAGGTGGGGTAGCTGTAAGATTTGTATTCCACAACACCACTTTCTGCATTGTCAATTCGCACCTGGCCGCCCACGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS TCA 72 bp | AATATAAGAAGCATCATCCCCACAAGGCGGACCAGTTaGACTTTTCTATACTTGGCCTTCGAAGGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: NIRSIIPTRRTS*TFLYLAFEGSP Trigger: GGGGCTGCCTTCGAAGGCCAAGTATAGAAAAGTTCAACTGGTCCGCCTTGTGGGGATGATGCTTCTTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 72 bp | CTCCAAGTAGCCCTCAAAAGGTTCAGCTCGAAGCCATaGCTTGCAGTATTGGCTGTCATTAAGCTTAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LQVALKRFSSKP*LAVLAVIKLRD Trigger: ATCCCTAAGCTTAATGACAGCCAATACTGCAAGCCATGGCTTCGAGCTGAACCTTTTGAGGGCTACTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CAA 72 bp | GCGGCCAGGTGCGAATTGACAATGCAGAAAGTGGTGTaGTGGAATACAAATCTTACAGCTACCCCACCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AARCELTMQKVV*WNTNLTATPPL Trigger: CAAAGGTGGGGTAGCTGTAAGATTTGTATTCCACAACACCACTTTCTGCATTGTCAATTCGCACCTGGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 90 bp | TCAAGTCCAGCTCTTGGAATCCAATGCAGTAAATATCAGGAGGATTaGGATCACAGTCGAGCCAAGGTTCTAAGCTGCTGTCTGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SSPALGIQCSKYQED*DHSRAKVLSCCLET Trigger: AGTCTCCAGACAGCAGCTTAGAACCTTGGCTCGACTGTGATCCAAATCCTCCTGATATTTACTGCATTGGATTCCAAGAGCTGGACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 90 bp | CAAGTAGCCCTCAAAAGGTTCAGCTCGAAGCCATGGCTTGCAGTATaGGCTGTCATTAAGCTTAGGGATGAAAGAAAAATGGCAGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: QVALKRFSSKPWLAV*AVIKLRDERKMAGN Trigger: GTTCCCTGCCATTTTTCTTTCATCCCTAAGCTTAATGACAGCCAATACTGCAAGCCATGGCTTCGAGCTGAACCTTTTGAGGGCTACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CAA 90 bp | GTCTTTTCATTCGGCACAAAGCCTCCAATGAGGTTCCAAAGCAACTaGGGAGGTAATTCCCACCGATGGTCAAGAAGTAATCTTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VFSFGTKPPMRFQSN*GGNSHRWSRSNLCL Trigger: GAGGCAAAGATTACTTCTTGACCATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCTCATTGGAGGCTTTGTGCCGAATGAAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS TCA 72 bp | CTTCACCGGAGTTCAGGATGGTTACAGAGTCTTTGCTaGCGTATACATCAAGGGAGATGTCTAAGGTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LHRSSGWLQSLC*RIHQGRCLRSR Trigger: ACGAGACCTTAGACATCTCCCTTGATGTATACGTCAGCAAAGACTCTGTAACCATCCTGAACTCCGGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS TCA 72 bp | TCGAATTGGTCTTTTCATTCGGCACAAAGCCTCCAATaGGGTTCCAAAGCAACTTGGGAGGTAATTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SNWSFHSAQSLQ*GSKATWEVIPT Trigger: GGTGGGAATTACCTCCCAAGTTGCTTTGGAACCTCATTGGAGGCTTTGTGCCGAATGAAAAGACCAATTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 72 bp | TCGGGACAAATAGCTTCCGCATGGTATTGGTCACTTTaGGCTGTTCTTTGTTTGAAGCTTCCTTTTCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGQIASAWYWSL*AVLCLKLPFHA Trigger: CGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 72 bp | GAAAAATGGCAGGGAACCTGTCCATTGTTGCTGATCTaGAACTTCTCCTTTTGCAGCTGCCGAAACTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: EKWQGTCPLLLI*NFSFCSCRNFT Trigger: TGTGAAGTTTCGGCAGCTGCAAAAGGAGAAGTTCCAGATCAGCAACAATGGACAGGTTCCCTGCCATTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CCA 72 bp | GCTTCCAGGAAAATGAGCAGTGCTTCAGCCACAGAATaGTTATTGCCAGGAATTGTCTCAGGAATGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ASRKMSSASATE*LLPGIVSGMLV Trigger: TACCAGCATTCCTGAGACAATTCCTGGCAATAACCATTCTGTGGCTGAAGCACTGCTCATTTTCCTGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
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| CDS CAA 72 bp | GTTTGGGTGTTCGGGACAAATAGCTTCCGCATGGTATaGGTCACTTTGGGCTGTTCTTTGTTTGAAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VWVFGTNSFRMV*VTLGCSLFEAS Trigger: GGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 72 bp | AAATATAAGAAGCATCATCCCCACAAGGCGGACCAGTaGAACTTTTCTATACTTGGCCTTCGAAGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KYKKHHPHKADQ*NFSILGLRRQP Trigger: GGGCTGCCTTCGAAGGCCAAGTATAGAAAAGTTCAACTGGTCCGCCTTGTGGGGATGATGCTTCTTATATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 72 bp | TTCGGCACAAAGCCTCCAATGAGGTTCCAAAGCAACTaGGGAGGTAATTCCCACCGATGGTCAAGAAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: FGTKPPMRFQSN*GGNSHRWSRSN Trigger: ATTACTTCTTGACCATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCTCATTGGAGGCTTTGTGCCGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS GCA 72 bp | GCTCTTTCACAGACTCGAAGTAGAAAAAGGCTTCGGTaGTCAAGTCCAGCTCTTGGAATCCAATGCAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALSQTRSRKRLR*SSPALGIQCSK Trigger: TTTACTGCATTGGATTCCAAGAGCTGGACTTGAGCACCGAAGCCTTTTTCTACTTCGAGTCTGTGAAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 72 bp | TTTGGGTGTTCGGGACAAATAGCTTCCGCATGGTATTaGTCACTTTGGGCTGTTCTTTGTTTGAAGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FGCSGQIASAWY*SLWAVLCLKLP Trigger: AGGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCCGAACACCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CCA 72 bp | AGGTTCCAAAGCAACTTGGGAGGTAATTCCCACCGATaGTCAAGAAGTAATCTTTGCCTCGATCCAAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: RFQSNLGGNSHR*SRSNLCLDPNG Trigger: TCCATTTGGATCGAGGCAAAGATTACTTCTTGACCATCGGTGGGAATTACCTCCCAAGTTGCTTTGGAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CAA 72 bp | GCTCTTGGAATCCAATGCAGTAAATATCAGGAGGATTaGGATCACAGTCGAGCCAAGGTTCTAAGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALGIQCSKYQED*DHSRAKVLSCC Trigger: ACAGCAGCTTAGAACCTTGGCTCGACTGTGATCCAAATCCTCCTGATATTTACTGCATTGGATTCCAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CAA 90 bp | GGGACAAATAGCTTCCGCATGGTATTGGTCACTTTGGGCTGTTCTTaGTTTGAAGCTTCCTTTTCACGCGAAAGCATTCTAGTCGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: GTNSFRMVLVTLGCS*FEASFSRESILVDE Trigger: TTCATCGACTAGAATGCTTTCGCGTGAAAAGGAAGCTTCAAACAAAGAACAGCCCAAAGTGACCAATACCATGCGGAAGCTATTTGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CAA 90 bp | TCTTCAATCTTATCTTCACCGGAGTTCAGGATGGTTACAGAGTCTTaGCTGACGTATACATCAAGGGAGATGTCTAAGGTCTCGTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSILSSPEFRMVTES*LTYTSREMSKVSFG Trigger: GCCAAACGAGACCTTAGACATCTCCCTTGATGTATACGTCAGCAAAGACTCTGTAACCATCCTGAACTCCGGTGAAGATAAGATTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
||
| CDS TCA 72 bp | ACATCATGCTTCATGATGTTCACTTGCGGGACAGTCTaGTTGGGGACTGAAAAAGTCATTCTTGCACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSCFMMFTCGTV*LGTEKVILAQM Trigger: CATCTGTGCAAGAATGACTTTTTCAGTCCCCAATCAGACTGTCCCGCAAGTGAACATCATGAAGCATGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS TCA 72 bp | GGGTTTGGAACAAGTCCTCCTGGTGACATGCATATTTaGACAAGTGATCTACTAGAAGCCAGATCTCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFGTSPPGDMHI*TSDLLEARSLW Trigger: CCAAAGAGATCTGGCTTCTAGTAGATCACTTGTTCAAATATGCATGTCACCAGGAGGACTTGTTCCAAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115013.2 |
||
| CDS CCA 72 bp | GCCAGGTGCGAATTGACAATGCAGAAAGTGGTGTTGTaGAATACAAATCTTACAGCTACCCCACCTTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARCELTMQKVVL*NTNLTATPPLF Trigger: AAACAAAGGTGGGGTAGCTGTAAGATTTGTATTCCACAACACCACTTTCTGCATTGTCAATTCGCACCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
||
| CDS CAA 72 bp | TTATCTTCACCGGAGTTCAGGATGGTTACAGAGTCTTaGCTGACGTATACATCAAGGGAGATGTCTAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSPEFRMVTES*LTYTSREMSKV Trigger: GACCTTAGACATCTCCCTTGATGTATACGTCAGCAAAGACTCTGTAACCATCCTGAACTCCGGTGAAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
||
| CDS GCA 72 bp | GGAGGTAATTCCCACCGATGGTCAAGAAGTAATCTTTaGCTCGATCCAAATGGAGGACAAGAATATCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GGNSHRWSRSNL*LDPNGGQEYLQ Trigger: TTGAAGATATTCTTGTCCTCCATTTGGATCGAGGCAAAGATTACTTCTTGACCATCGGTGGGAATTACCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CCA 72 bp | TATTGGCTGTCATTAAGCTTAGGGATGAAAGAAAAATaGCAGGGAACCTGTCCATTGTTGCTGATCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: YWLSLSLGMKEK*QGTCPLLLIWN Trigger: GTTCCAGATCAGCAACAATGGACAGGTTCCCTGCCATTTTTCTTTCATCCCTAAGCTTAATGACAGCCAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CAA 72 bp | CTCAAAAGGTTCAGCTCGAAGCCATGGCTTGCAGTATaGGCTGTCATTAAGCTTAGGGATGAAAGAAAAATG | + |
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Preference number: 6 (lower is better) Translates to: LKRFSSKPWLAV*AVIKLRDERKM Trigger: CATTTTTCTTTCATCCCTAAGCTTAATGACAGCCAATACTGCAAGCCATGGCTTCGAGCTGAACCTTTTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CAA 90 bp | TGTTCACTTGCGGGACAGTCTGATTGGGGACTGAAAAAGTCATTCTaGCACAGATGTCTTTATAATCCTGATTCCTTCGTTCGAACTCTT | + |
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Preference number: 6 (lower is better) Translates to: CSLAGQSDWGLKKSF*HRCLYNPDSFVRTL Trigger: AAGAGTTCGAACGAAGGAATCAGGATTATAAAGACATCTGTGCAAGAATGACTTTTTCAGTCCCCAATCAGACTGTCCCGCAAGTGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 |
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| CDS CAA 90 bp | CGGCATTTCCCACTGGAATCCCATCTGTCAGTTTTCGAATCATATTaGTACGTGGGAACGAAATTAATTTCCCCTTCATTGAAATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: RHFPLESHLSVFESY*YVGTKLISPSLKSA Trigger: TGCGGATTTCAATGAAGGGGAAATTAATTTCGTTCCCACGTACAAATATGATTCGAAAACTGACAGATGGGATTCCAGTGGGAAATGCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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| CDS CAA 72 bp | ACTAGTTTTGAGTTCCATGTGACTCCGGTAATGAAGTaGATTAACATTTATTCCTCTCCAAAGAATTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: TSFEFHVTPVMK*INIYSSPKNSV Trigger: GACCGAATTCTTTGGAGAGGAATAAATGTTAATCAACTTCATTACCGGAGTCACATGGAACTCAAAACTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001202.15 ENSMUST00000115020.8 ENSMUST00000154732.2 |
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