Pregenerated sensors for OCLN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021638Ensembl transcript IDs: ENSMUST00000022140.12, ENSMUST00000069756.11, ENSMUST00000159459.8, ENSMUST00000159515.2, ENSMUST00000160859.8
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCACCGCAGGAAAAGTGATGATACCGGTCCACGACGTTAACTCCTaGACCAGCACTCAGAGAAGCTGTGTGAGTTCAAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: VTAGKVMIPVHDVNS*TSTQRSCVSSRPAW Trigger: CCAGGCTGGCCTTGAACTCACACAGCTTCTCTGAGTGCTGGTTCAGGAGTTAACGTCGTGGACCGGTATCATCACTTTTCCTGCGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR GCA 90 bp | ACTTCCCAGATTAGAGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTaGAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCA | + |
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Preference number: 1 (lower is better) Translates to: TSQIRVQSQFASGEN*RDIVQADAPLPSPA Trigger: TGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACTCTAATCTGGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR GCA 90 bp | TGCCACCCGGGGAGTGGGAGGCAGGAGGACTGCAAATTTGAAGTCTaGCATCTTGAGCTACCTAGTGAAACCCTGTCTAAATCAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: CHPGSGRQEDCKFEV*HLELPSETLSKSKQ Trigger: TTGTTTTGATTTAGACAGGGTTTCACTAGGTAGCTCAAGATGGCAGACTTCAAATTTGCAGTCCTCCTGCCTCCCACTCCCCGGGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR GCA 90 bp | TGCCTGAACAGACCGATGGACACACCCTGGTACTGGCTTCAGGCCTaGAGTGGTAGCACCACGTTGGAAAAGAATTATTTCTTTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: CLNRPMDTPWYWLQA*SGSTTLEKNYFFYS Trigger: AGAGTAAAAGAAATAATTCTTTTCCAACGTGGTGCTACCACTGCAGGCCTGAAGCCAGTACCAGGGTGTGTCCATCGGTCTGTTCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR GCA 90 bp | CTGTTCTATGAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTaGCCAAGGACTGGGCAATCACCTGCTAGCACAGCACCCAAGGTA | + |
|
Preference number: 1 (lower is better) Translates to: LFYEHYPISSQSFVH*PRTGQSPASTAPKV Trigger: TACCTTGGGTGCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTCATAGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR CCA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTaGAAAACCAAAAACAACCTGATTCTAAATAACAGTCACCTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: SVSSRSARATQRNPV*KTKNNLILNNSHLR Trigger: CCTCAGGTGACTGTTATTTAGAATCAGGTTGTTTTTGGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAGGAGAACCTCTAATCTACCTGCCACCCGGGGAGTGGGAGGCAGGAGGAAACAGAAAAGAACAATaGTTTCCAAGAGGGAGACGT | + |
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Preference number: 2 (lower is better) Translates to: PGGEPLIYLPPGEWEAGGNRKEQ*FPRGRR Trigger: ACGTCTCCCTCTTGGAAATCATTGTTCTTTTCTGTT...TCCTCCTGCCTCCCACTCCCCGGGTGGCAGGTAGATTAGAGGTTCTCCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR CAA 90 bp | AATCTACCTGCCACCCGGGGAGTGGGAGGCAGGAGGACTGCAAATTaGAAGTCTGCCATCTTGAGCTACCTAGTGAAACCCTGTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: NLPATRGVGGRRTAN*KSAILSYLVKPCLN Trigger: ATTTAGACAGGGTTTCACTAGGTAGCTCAAGATGGCAGACTTCAAATTTGCAGTCCTCCTGCCTCCCACTCCCCGGGTGGCAGGTAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR-3UTR CCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATATTAGACGGTCTACCTaGAGGAACACACTGCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: AKTALAVSVWRSHRRKSDIRRST*RNTLPG Trigger: GCCAGGCAGTGTGTTCCTCCAGGTAGACCGTCTAAT...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CCA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCAAGTCAGTTTGCCTCTaGAGAGAATTGCAGAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: SVSSRSARATQRNPVWKTKSVCL*RELQRH Trigger: ATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTT...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTGTGAACCTTCACATCAAAGCTCAACACACATCACAGCTCACACCAGGACCAAGTCAGTTTGCCTCTaGAGAGAATTGCAGAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: ACEPSHQSSTHITAHTRTKSVCL*RELQRH Trigger: ATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTT...GGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATAGTCCAAAGTCAGTTTaGCTCTGGAGAGAATTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AKTALAVSVWRSHRRKSDSPKSV*LWRELQ Trigger: CTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATACCGGTAAGTCAGTTTGCCTCTaGAGAGAATTGCAGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: ALAVSVWRSHRRKSDDTGKSVCL*RELQRH Trigger: ATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTT...ACCGGTATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATAGTCCAAAGTCAGTTTaGCTCTGGAGAGAATTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KTALAVSVWRSHRRKSDDSPKSV*LWRELQ Trigger: CTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAACCTTGATCTTACCAACTTACAATAACACACACACGTGCGCATCATTTGGGAGGCAGGAGGACTaGAAATTTGAAGTCTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: METLILPTYNNTHTCASFGRQED*KFEVCH Trigger: ATGGCAGACTTCAAATTTGCAGTCCTCCTGCCTCCC...AAATGATGCGCACGTGTGTGTGTTATTGTAAGTTGGTAAGATCAAGGTTTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR-3UTR TCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATCACCAGGACCTTTCTTaGCATTTAAAATATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AKTALAVSVWRSHRRKSDHQDLS*HLKYQA Trigger: TGCTTGATATTTTAAATGTCAAGAAAGGTCCTGGTG...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATCACCAGGACCTTTCTTaGCATTTAAAATATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KTALAVSVWRSHRRKSDDHQDLS*HLKYQA Trigger: TGCTTGATATTTTAAATGTCAAGAAAGGTCCTGGTG...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTCTATGAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTGCCCAAAAGTCAGTTTGCCTCTaGAGAGAATTGCAGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: CCSMNIIPFLVRVLFTAQKSVCL*RELQRH Trigger: ATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTT...TTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTCATAGAACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAACCTTGATCTTACCAACTTACAATAACACACACACGTGCGCATCATTTCACCAGGACCTTTCTTaGCATTTAAAATATCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: METLILPTYNNTHTCASFHQDLS*HLKYQA Trigger: TGCTTGATATTTTAAATGTCAAGAAAGGTCCTGGTG...AAATGATGCGCACGTGTGTGTGTTATTGTAAGTTGGTAAGATCAAGGTTTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTTCTATGAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTGCCCAAGATACTCTGATACAATaGAAAGGTCTAGTGGGTTAT | + |
|
Preference number: 2 (lower is better) Translates to: CCSMNIIPFLVRVLFTAQDTLIQ*KGLVGY Trigger: ATAACCCACTAGACCTTTCCATTGTATCAGAGTATC...TTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTCATAGAACAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR CCA 72 bp | AACTGCCTGAACAGACCGATGGACACACCCTGGTACTaGCTTCAGGCCTGCAGTGGTAGCACCACGTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: NCLNRPMDTPWY*LQACSGSTTLE Trigger: TTCCAACGTGGTGCTACCACTGCAGGCCTGAAGCCAGTACCAGGGTGTGTCCATCGGTCTGTTCAGGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR GCA 72 bp | GTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTaGAGGCAGATGCACCTCTCCCTTCTCCCGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: VSLPLERIAETS*RQMHLSLLPQL Trigger: CAGTTGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTTTGTTCACTGCCCAAGGACTGGGCAATCACCTGCTAGCACAGCACCCATGCCTCTGGAGAGAATaGCAGAGACATCGTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: RVLFTAQGLGNHLLAQHPCLWRE*QRHRAG Trigger: GCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCA...TGGGTGCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR GCA 72 bp | AGACCGATGGACACACCCTGGTACTGGCTTCAGGCCTaGAGTGGTAGCACCACGTTGGAAAAGAATTATTTC | + |
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Preference number: 3 (lower is better) Translates to: RPMDTPWYWLQA*SGSTTLEKNYF Trigger: GAAATAATTCTTTTCCAACGTGGTGCTACCACTGCAGGCCTGAAGCCAGTACCAGGGTGTGTCCATCGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR-3UTR CAA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATTGCCTCTGGAGAGAATaGCAGAGACATCGTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: AKTALAVSVWRSHRRKSDCLWRE*QRHRAG Trigger: GCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCA...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR GCA 72 bp | GGGAGTGGGAGGCAGGAGGACTGCAAATTTGAAGTCTaGCATCTTGAGCTACCTAGTGAAACCCTGTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: GSGRQEDCKFEV*HLELPSETLSK Trigger: TTTAGACAGGGTTTCACTAGGTAGCTCAAGATGGCAGACTTCAAATTTGCAGTCCTCCTGCCTCCCACTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR GCA 72 bp | GAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTaGCCAAGGACTGGGCAATCACCTGCTAGCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: EHYPISSQSFVH*PRTGQSPASTA Trigger: TGCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| 3UTR-3UTR CAA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATATGCCTCTGGAGAGAATaGCAGAGACATCGTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: KAQHTSQLTPGPFLTFKICLWRE*QRHRAG Trigger: GCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCA...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CAA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCGAGTCCAAAGTCAGTTaGCCTCTGGAGAGAATTGCA | + |
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Preference number: 3 (lower is better) Translates to: NVADIMYRISPEIQRQECESKVS*PLERIA Trigger: TGCAATTCTCTCCAGAGGCAAACTGACTTTGGACTC...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CAA 90 bp | GATAGGAAACTGATGGAATTAAAGCCACGGAAACTTTGTAATGATCACAAAGTTTGCCTCTGGAGAGAATaGCAGAGACATCGTGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: DRKLMELKPRKLCNDHKVCLWRE*QRHRAG Trigger: GCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCA...AACTTTGTGATCATTACAAAGTTTCCGTGGCTTTAATTCCATCAGTTTCCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATACCGGTACACCAGGACCTTTCTaGACATTTAAAATATCAAGC | + |
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Preference number: 3 (lower is better) Translates to: ALAVSVWRSHRRKSDDTGTPGPF*TFKISS Trigger: GCTTGATATTTTAAATGTCAAGAAAGGTCCTGGTGT...ACCGGTATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR-3UTR CAA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCACACCAGGACCTTTCTaGACATTTAAAATATCAAGC | + |
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Preference number: 3 (lower is better) Translates to: NVADIMYRISPEIQRQECTPGPF*TFKISS Trigger: GCTTGATATTTTAAATGTCAAGAAAGGTCCTGGTGT...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| 3UTR GCA 72 bp | ACCTTGATCTTACCAACTTACAATAACACACACACGTaGGCATCATTTAATGCAGGGAACTTCATAAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: TLILPTYNNTHT*ASFNAGNFIRR Trigger: CCTTCTTATGAAGTTCCCTGCATTAAATGATGCGCACGTGTGTGTGTTATTGTAAGTTGGTAAGATCAAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| CDS-3UTR CCA 90 bp | TGGAGAGAATTGCAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCATAGATCCAGAAGCCTaGGCCGTCGGGTTCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: WRELQRHRAGRCTSPFSRIDPEA*AVGFTP Trigger: GGGAGTGAACCCGACGGCCCAGGCTTCTGGATCTAT...GCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTGCAATTCTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| 3UTR CAA 72 bp | GCCACCCGGGGAGTGGGAGGCAGGAGGACTGCAAATTaGAAGTCTGCCATCTTGAGCTACCTAGTGAAACCC | + |
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Preference number: 4 (lower is better) Translates to: ATRGVGGRRTAN*KSAILSYLVKP Trigger: GGGTTTCACTAGGTAGCTCAAGATGGCAGACTTCAAATTTGCAGTCCTCCTGCCTCCCACTCCCCGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
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| CDS-3UTR CCA 90 bp | CAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCAACTGGCATCTCGCCTTTGGCTGCTCTTaGGTCTGTATATCCGCCATA | + |
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Preference number: 4 (lower is better) Translates to: QRHRAGRCTSPFSRNWHLAFGCS*VCISAI Trigger: TATGGCGGATATACAGACCCAAGAGCAGCCAAAGGC...GAGATGCCAGTTGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CCA 90 bp | CAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCAACTGGCATCTCCCAACAGGAAGCCTTTaGCTGCTCTTGGGTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: QRHRAGRCTSPFSRNWHLPTGSL*LLLGLY Trigger: ATACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGG...GAGATGCCAGTTGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR TCA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCAAAGAGTACGCTGGCTaGGAGAGCATCGGCCGGACA | + |
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Preference number: 4 (lower is better) Translates to: SVSSRSARATQRNPVWKTKEYAG*ESIGRT Trigger: TGTCCGGCCGATGCTCTCTCAGCCAGCGTACTCTTT...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR TCA 90 bp | CAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCAACTGGCATCTCCTCCCACCATCCTCTTaGTGTGCGATAATTTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: QRHRAGRCTSPFSRNWHLLPPSS*CAIICS Trigger: AGAGCAAATTATCGCACATCAAGAGGATGGTGGGAG...GAGATGCCAGTTGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACACCTCTTGCCCTTTCCTaGTTTCCCCTTCGTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LEEHTAWRVNLHIKAQHTPLALS*FPLRGS Trigger: GCTCCCACGAAGGGGAAAGCAGGAAAGGGCAAGAGG...TGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACAGATCCGGATCACCCCTaGGGGCGACGTCCATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: LEEHTAWRVNLHIKAQHTDPDHP*GRRPFV Trigger: TACAAATGGACGTCGCCCCCAGGGGTGATCCGGATC...TGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CCA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGAGATCCGGATCACCCCTaGGGGCGACGTCCATTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SPKSVCLWRELQRHRAGRDPDHP*GRRPFV Trigger: TACAAATGGACGTCGCCCCCAGGGGTGATCCGGATC...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CCA 90 bp | GCGTGTGAACCTTCACATCAAAGCTCAACACACATCACAGCTCACACCAGGACCAGCAGAAGGCTGCCATaGCCAACAGGAAGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACEPSHQSSTHITAHTRTSRRLP*PTGSLW Trigger: CCAAAGGCTTCCTGTTGGCCATGGCAGCCTTCTGCT...GGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACAGTCAGAGGAATCTCCTaGGCCACTTCAGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEEHTAWRVNLHIKAQHTVRGIS*ATSGTR Trigger: TCTGGTGCCTGAAGTGGCCCAGGAGATTCCTCTGAC...TGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAACCTTCACATCAAAGCTCAACACACATCACAGCTCACACCAGGACCGTCAGAGGAATCTCCTaGGCCACTTCAGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACEPSHQSSTHITAHTRTVRGIS*ATSGTR Trigger: TCTGGTGCCTGAAGTGGCCCAGGAGATTCCTCTGAC...GGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATACCGGTCCTCTTGCCCTTTCCTaGTTTCCCCTTCGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALAVSVWRSHRRKSDDTGPLALS*FPLRGS Trigger: GCTCCCACGAAGGGGAAAGCAGGAAAGGGCAAGAGG...ACCGGTATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAACCTTCACATCAAAGCTCAACACACATCACAGCTCACACCAGGACCATAAAAAGAGTACGCTaGCTGAGAGAGCATCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ACEPSHQSSTHITAHTRTIKRVR*LREHRP Trigger: CGGCCGATGCTCTCTCAGCCAGCGTACTCTTTTTAT...GGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAACCTTCACATCAAAGCTCAACACACATCACAGCTCACACCAGGACCGCCTTTGGCTGCTCTTaGGTCTGTATATCCGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ACEPSHQSSTHITAHTRTAFGCS*VCISAI Trigger: TATGGCGGATATACAGACCCAAGAGCAGCCAAAGGC...GGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATACCGGTAGCAGAAGGCTGCCATaGCCAACAGGAAGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ALAVSVWRSHRRKSDDTGSRRLP*PTGSLW Trigger: CCAAAGGCTTCCTGTTGGCCATGGCAGCCTTCTGCT...ACCGGTATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGTTTTGTTCACTGCCCAAGGACTGGGCAATCACCTGCTAGCACAGCACCCCCCACTCTTCAACATTaGGGGGCTGTTCATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSFVHCPRTGQSPASTAPPTLQH*GAVHHK Trigger: TTTATGATGAACAGCCCCCCAATGTTGAAGAGTGGG...GGGTGCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGTCAGAGGAATCTCCTaGGCCACTTCAGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKTALAVSVWRSHRRKSDVRGIS*ATSGTR Trigger: TCTGGTGCCTGAAGTGGCCCAGGAGATTCCTCTGAC...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAGAGAATTGCAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCATAATGATTGGGTTTaGATTCATCAGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LERIAETSCRQMHLSLLPHNDWV*IHQVCK Trigger: CTTACAGACCTGATGAATTCAAACCCAATCATTATG...CGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTGCAATTCTCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGACTCCCACCATCCTCTTaGTGTGCGATAATTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVCLWRELQRHRAGRLPPSS*CAIICS Trigger: AGAGCAAATTATCGCACATCAAGAGGATGGTGGGAG...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCCCTCTTGCCCTTTCCTaGTTTCCCCTTCGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVADIMYRISPEIQRQECPLALS*FPLRGS Trigger: GCTCCCACGAAGGGGAAAGCAGGAAAGGGCAAGAGG...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGAGAATTGCAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGATACTCCTGCAGACCTaGATCAAAATTTCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LERIAETSCRQMHLSLLPILLQT*IKISLV Trigger: TACAAGAGAAATTTTGATGCAGGTCTGCAGGAGTAT...CGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTGCAATTCTCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGAATTGCAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCAAGCTCTTATACTCCTaGAGACCTGCATCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: WRELQRHRAGRCTSPFSRKLLYS*RPASKF Trigger: AAATTTTGATGCAGGTCTGCAGGAGTATAAGAGCTT...GCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTGCAATTCTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGAAGGTCTGTAAGGAGGTaGACTTTCAAAAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVCLWRELQRHRAGRRSVRR*TFKRPH Trigger: GTGAGGCCTTTTGAAAGTCCACCTCCTTACAGACCT...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCGATCCGGATCACCCCTaGGGGCGACGTCCATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NVADIMYRISPEIQRQECDPDHP*GRRPFV Trigger: TACAAATGGACGTCGCCCCCAGGGGTGATCCGGATC...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATATAGATCCAGAAGCCTaGGCCGTCGGGTTCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTALAVSVWRSHRRKSDDIDPEA*AVGFTP Trigger: GGGAGTGAACCCGACGGCCCAGGCTTCTGGATCTAT...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCAACTGGCATCTCTATCCCACAAAATATTaGACTTATCATACCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRHRAGRCTSPFSRNWHLYPTKY*TYHTDP Trigger: TGGATCGGTATGATAAGTCCAATATTTTGTGGGATA...GAGATGCCAGTTGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATACCGGTCTCCCACCATCCTCTTaGTGTGCGATAATTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALAVSVWRSHRRKSDDTGLPPSS*CAIICS Trigger: AGAGCAAATTATCGCACATCAAGAGGATGGTGGGAG...ACCGGTATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACATCCGCCATACATGTCATTaGTTGGTGCATAATGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTHCLACEPSHQSSTHIRHTCH*LVHNDW Trigger: CCAATCATTATGCACCAAGCAATGACATGTATGGCG...GATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATACCGGTAGGTCTGTAAGGAGGTaGACTTTCAAAAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALAVSVWRSHRRKSDDTGRSVRR*TFKRPH Trigger: GTGAGGCCTTTTGAAAGTCCACCTCCTTACAGACCT...ACCGGTATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGACCCACTCTTCAACATTaGGGGGCTGTTCATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVCLWRELQRHRAGRPTLQH*GAVHHK Trigger: TTTATGATGAACAGCCCCCCAATGTTGAAGAGTGGG...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTCTATGAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTGCCCAAAAAGAGTACGCTGGCTaGGAGAGCATCGGCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CCSMNIIPFLVRVLFTAQKEYAG*ESIGRT Trigger: TGTCCGGCCGATGCTCTCTCAGCCAGCGTACTCTTT...TTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTCATAGAACAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR GCA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGACGCCATACATGTCATTaGTTGGTGCATAATGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPKSVCLWRELQRHRAGRRHTCH*LVHNDW Trigger: CCAATCATTATGCACCAAGCAATGACATGTATGGCG...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATACCTCTTGCCCTTTCCTaGTTTCCCCTTCGTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQHTSQLTPGPFLTFKIPLALS*FPLRGS Trigger: GCTCCCACGAAGGGGAAAGCAGGAAAGGGCAAGAGG...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACATCCATAATGATTGGGTTTaGATTCATCAGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGTHCLACEPSHQSSTHIHNDWV*IHQVCK Trigger: CTTACAGACCTGATGAATTCAAACCCAATCATTATG...GATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCCAGGAAGCCTTTGGCTaGTCTTGGGTCTGTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: NVADIMYRISPEIQRQECQEAFG*SWVCIS Trigger: GGATATACAGACCCAAGAGCAGCCAAAGGCTTCCTG...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACAATACTCCTGCAGACCTaGATCAAAATTTCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LEEHTAWRVNLHIKAQHTILLQT*IKISLV Trigger: TACAAGAGAAATTTTGATGCAGGTCTGCAGGAGTAT...TGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGTGAACCTTCACATCAAAGCTCAACACACATCACAGCTCACACCAGGACCAAGCTCTTATACTCCTaGAGACCTGCATCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: ACEPSHQSSTHITAHTRTKLLYS*RPASKF Trigger: AAATTTTGATGCAGGTCTGCAGGAGTATAAGAGCTT...GGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTTTGTTCACTGCCCAAGGACTGGGCAATCACCTGCTAGCACAGCACCCATATCCCACAAAATATTaGACTTATCATACCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLFTAQGLGNHLLAQHPYPTKY*TYHTDP Trigger: TGGATCGGTATGATAAGTCCAATATTTTGTGGGATA...TGGGTGCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATCCCACTCTTCAACATTaGGGGGCTGTTCATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: AKTALAVSVWRSHRRKSDPTLQH*GAVHHK Trigger: TTTATGATGAACAGCCCCCCAATGTTGAAGAGTGGG...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| 3UTR CAA 72 bp | GGAGGCAGGAGGACTGCAAATTTGAAGTCTGCCATCTaGAGCTACCTAGTGAAACCCTGTCTAAATCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRRTANLKSAI*SYLVKPCLNQN Trigger: GTTTTGATTTAGACAGGGTTTCACTAGGTAGCTCAAGATGGCAGACTTCAAATTTGCAGTCCTCCTGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR GCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATCGCCATACATGTCATTaGTTGGTGCATAATGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKTALAVSVWRSHRRKSDRHTCH*LVHNDW Trigger: CCAATCATTATGCACCAAGCAATGACATGTATGGCG...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCAGGTCTGTAAGGAGGTaGACTTTCAAAAGGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVADIMYRISPEIQRQECRSVRR*TFKRPH Trigger: GTGAGGCCTTTTGAAAGTCCACCTCCTTACAGACCT...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCTATCCCACAAAATATTaGACTTATCATACCGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSRSARATQRNPVWKTYPTKY*TYHTDP Trigger: TGGATCGGTATGATAAGTCCAATATTTTGTGGGATA...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| 3UTR CAA 72 bp | TGGTACTGGCTTCAGGCCTGCAGTGGTAGCACCACGTaGGAAAAGAATTATTTCTTTTACTCTTCCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: WYWLQACSGSTT*EKNYFFYSSNI Trigger: GATGTTGGAAGAGTAAAAGAAATAATTCTTTTCCAACGTGGTGCTACCACTGCAGGCCTGAAGCCAGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR GCA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATACAGGAAGCCTTTGGCTaGTCTTGGGTCTGTATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQHTSQLTPGPFLTFKIQEAFG*SWVCIS Trigger: GGATATACAGACCCAAGAGCAGCCAAAGGCTTCCTG...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATAGCCTTTGGCTGCTCTTaGGTCTGTATATCCGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KAQHTSQLTPGPFLTFKIAFGCS*VCISAI Trigger: TATGGCGGATATACAGACCCAAGAGCAGCCAAAGGC...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTTCTATGAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTGCCCAACCAACAGGAAGCCTTTaGCTGCTCTTGGGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CCSMNIIPFLVRVLFTAQPTGSL*LLLGLY Trigger: ATACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGG...TTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTCATAGAACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR CCA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATACCAACAGGAAGCCTTTaGCTGCTCTTGGGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQHTSQLTPGPFLTFKIPTGSL*LLLGLY Trigger: ATACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGG...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATCCCACTCTTCAACATTaGGGGGCTGTTCATCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTALAVSVWRSHRRKSDDPTLQH*GAVHHK Trigger: TTTATGATGAACAGCCCCCCAATGTTGAAGAGTGGG...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR TCA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATCATAATGATTGGGTTTaGATTCATCAGGTCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AKTALAVSVWRSHRRKSDHNDWV*IHQVCK Trigger: CTTACAGACCTGATGAATTCAAACCCAATCATTATG...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CCA 90 bp | GATAGGAAACTGATGGAATTAAAGCCACGGAAACTTTGTAATGATCACAAAGTTATAAAAAGAGTACGCTaGCTGAGAGAGCATCGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DRKLMELKPRKLCNDHKVIKRVR*LREHRP Trigger: CGGCCGATGCTCTCTCAGCCAGCGTACTCTTTTTAT...AACTTTGTGATCATTACAAAGTTTCCGTGGCTTTAATTCCATCAGTTTCCTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR TCA 90 bp | GATAGGAAACTGATGGAATTAAAGCCACGGAAACTTTGTAATGATCACAAAGTTCTCCCACCATCCTCTTaGTGTGCGATAATTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRKLMELKPRKLCNDHKVLPPSS*CAIICS Trigger: AGAGCAAATTATCGCACATCAAGAGGATGGTGGGAG...AACTTTGTGATCATTACAAAGTTTCCGTGGCTTTAATTCCATCAGTTTCCTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR GCA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATATACTCCTGCAGACCTaGATCAAAATTTCTCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KTALAVSVWRSHRRKSDDILLQT*IKISLV Trigger: TACAAGAGAAATTTTGATGCAGGTCTGCAGGAGTAT...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR GCA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATAAGCTCTTATACTCCTaGAGACCTGCATCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: KTALAVSVWRSHRRKSDDKLLYS*RPASKF Trigger: AAATTTTGATGCAGGTCTGCAGGAGTATAAGAGCTT...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS GCA 90 bp | AGCGATGAAGCAGAAGGCTGCCATGGCCAACAGGAAGCCTTTGGCTaGTCTTGGGTCTGTATATCCGCCATAGCCATAGCCATAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SDEAEGCHGQQEAFG*SWVCISAIAIAIAS Trigger: GGAGGCTATGGCTATGGCTATGGCGGATATACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGGCCATGGCAGCCTTCTGCTTCATCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCGCCAACAGGAAGCCTTaGGCTGCTCTTGGGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRSARATQRNPVWKTANRKP*AALGSV Trigger: TACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGGC...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACAAGCCTTTGGCTGCTCTaGGGTCTGTATATCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LEEHTAWRVNLHIKAQHTSLWLL*GLYIRH Trigger: ATGGCGGATATACAGACCCAAGAGCAGCCAAAGGCT...TGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | CAGAGTTTTGTTCACTGCCCAAGGACTGGGCAATCACCTGCTAGCACAGCACCCCAGGCACCAGAGGTGTaGACTTATAGAAAGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSFVHCPRTGQSPASTAPQAPEV*TYRKTL Trigger: CAGAGTCTTTCTATAAGTCAACACCTCTGGTGCCTG...GGGTGCTGTGCTAGCAGGTGATTGCCCAGTCCTTGGGCAGTGAACAAAACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR CAA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGAAGCCTTTGGCTGCTCTaGGGTCTGTATATCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPKSVCLWRELQRHRAGRSLWLL*GLYIRH Trigger: ATGGCGGATATACAGACCCAAGAGCAGCCAAAGGCT...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGACATCGTGCAGGCAGATGCACCTCTCCCTTCTCCCGCAACTGGCATCTCTTATCCCACAAAATATaGGACTTATCATACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: QRHRAGRCTSPFSRNWHLLSHKI*DLSYRS Trigger: GGATCGGTATGATAAGTCCAATATTTTGTGGGATAA...GAGATGCCAGTTGCGGGAGAAGGGAGAGGTGCATCTGCCTGCACGATGTCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCCAGGCACCAGAGGTGTaGACTTATAGAAAGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRSARATQRNPVWKTQAPEV*TYRKTL Trigger: CAGAGTCTTTCTATAAGTCAACACCTCTGGTGCCTG...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS TCA 90 bp | AGTACCTCCAGGAGTATAAAACTGGTTGCAGATCATATATATCTGTaGGCCGTACATAGATCCAGAAGCCTGGGCCGTCGGGTTCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: STSRSIKLVADHIYL*AVHRSRSLGRRVHS Trigger: GGAGTGAACCCGACGGCCCAGGCTTCTGGATCTATGTACGGCTCACAGATATATATGATCTGCAACCAGTTTTATACTCCTGGAGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CCA 90 bp | GAGCATCGGCCGGACATGCATCTCTCCGCCATACATGTCATTGCTTaGTGCATAATGATTGGGTTTGAATTCATCAGGTCTGTAAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHRPDMHLSAIHVIA*CIMIGFEFIRSVRR Trigger: CCTCCTTACAGACCTGATGAATTCAAACCCAATCATTATGCACCAAGCAATGACATGTATGGCGGAGAGATGCATGTCCGGCCGATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS CCA 90 bp | GATGCACATCACAATAATGAGCATAGACAGGATCCGGATCACCCCTaGGGGCGACGTCCATTTGTAGAAGTGAAGAATTTCATCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DAHHNNEHRQDPDHP*GRRPFVEVKNFIFR Trigger: CCGGAAGATGAAATTCTTCACTTCTACAAATGGACGTCGCCCCCAGGGGTGATCCGGATCCTGTCTATGCTCATTATTGTGATGTGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CCA 90 bp | TTGCAGATCATATATATCTGTGAGCCGTACATAGATCCAGAAGCCTaGGCCGTCGGGTTCACTCCCATTATGTACACGATCGTGGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: LQIIYICEPYIDPEA*AVGFTPIMYTIVAI Trigger: TATTGCCACGATCGTGTACATAATGGGAGTGAACCCGACGGCCCAGGCTTCTGGATCTATGTACGGCTCACAGATATATATGATCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CCA 90 bp | TTTGTAGAAGTGAAGAATTTCATCTTCCGGATAAAAAGAGTACGCTaGCTGAGAGAGCATCGGCCGGACATGCATCTCTCCGCCATACAT | + |
|
Preference number: 5 (lower is better) Translates to: FVEVKNFIFRIKRVR*LREHRPDMHLSAIH Trigger: ATGTATGGCGGAGAGATGCATGTCCGGCCGATGCTCTCTCAGCCAGCGTACTCTTTTTATCCGGAAGATGAAATTCTTCACTTCTACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGAACACACTGCCTGGCGTGTGAACCTTCACATCAAAGCTCAACACACATCCATACATGTCATTGCTaGGTGCATAATGATTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGTHCLACEPSHQSSTHIHTCHC*VHNDWV Trigger: AACCCAATCATTATGCACCAAGCAATGACATGTATG...GATGTGTGTTGAGCTTTGATGTGAAGGTTCACACGCCAGGCAGTGTGTTCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCGTAGTGATACAAATATaGATCCACGTAGAGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRSARATQRNPVWKTVVIQI*IHVETS Trigger: ACTGGTCTCTACGTGGATCAATATTTGTATCACTAC...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATCAGGCACCAGAGGTGTaGACTTATAGAAAGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AKTALAVSVWRSHRRKSDQAPEV*TYRKTL Trigger: CAGAGTCTTTCTATAAGTCAACACCTCTGGTGCCTG...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | AGTCCAAAGTCAGTTTGCCTCTGGAGAGAATTGCAGAGACATCGTGCAGGCAGACATACATGTCATTGCTaGGTGCATAATGATTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPKSVCLWRELQRHRAGRHTCHC*VHNDWV Trigger: AACCCAATCATTATGCACCAAGCAATGACATGTATG...TCTGCCTGCACGATGTCTCTGCAATTCTCTCCAGAGGCAAACTGACTTTGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATAGCCAACAGGAAGCCTTaGGCTGCTCTTGGGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KAQHTSQLTPGPFLTFKIANRKP*AALGSV Trigger: TACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGGC...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | TGCTGTTCTATGAACATTATCCCATTTCTAGTCAGAGTTTTGTTCACTGCCCAAGCCAACAGGAAGCCTTaGGCTGCTCTTGGGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CCSMNIIPFLVRVLFTAQANRKP*AALGSV Trigger: TACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGGC...TTGGGCAGTGAACAAAACTCTGACTAGAAATGGGATAATGTTCATAGAACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069756.11 |
||
| CDS-3UTR CAA 90 bp | AGCGTAAGTTCTAGGTCAGCCAGGGCTACACAGAGAAACCCTGTCTGGAAAACCTTATCCCACAAAATATaGGACTTATCATACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSRSARATQRNPVWKTLSHKI*DLSYRS Trigger: GGATCGGTATGATAAGTCCAATATTTTGTGGGATAA...GGTTTTCCAGACAGGGTTTCTCTGTGTAGCCCTGGCTGACCTAGAACTTACGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCCAGGCACCAGAGGTGTaGACTTATAGAAAGACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NVADIMYRISPEIQRQECQAPEV*TYRKTL Trigger: CAGAGTCTTTCTATAAGTCAACACCTCTGGTGCCTG...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | GCCAAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGTAGTGATACAAATATaGATCCACGTAGAGACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AKTALAVSVWRSHRRKSDVVIQI*IHVETS Trigger: ACTGGTCTCTACGTGGATCAATATTTGTATCACTAC...ATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | AACGTGGCCGATATAATGTATCGTATTTCCCCTGAAATACAAAGGCAGGAATGCTTATCCCACAAAATATaGGACTTATCATACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: NVADIMYRISPEIQRQECLSHKI*DLSYRS Trigger: GGATCGGTATGATAAGTCCAATATTTTGTGGGATAA...GCATTCCTGCCTTTGTATTTCAGGGGAAATACGATACATTATATCGGCCACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTGCCTTAGCAGTTTCAGTTTGGAGAAGTCACCGCAGGAAAAGTGATGATTTATCCCACAAAATATaGGACTTATCATACCGATCC | + |
|
Preference number: 5 (lower is better) Translates to: KTALAVSVWRSHRRKSDDLSHKI*DLSYRS Trigger: GGATCGGTATGATAAGTCCAATATTTTGTGGGATAA...ATCATCACTTTTCCTGCGGTGACTTCTCCAAACTGAAACTGCTAAGGCAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS-3UTR CAA 90 bp | AAAGCTCAACACACATCACAGCTCACACCAGGACCTTTCTTGACATTTAAAATACATACATGTCATTGCTaGGTGCATAATGATTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KAQHTSQLTPGPFLTFKIHTCHC*VHNDWV Trigger: AACCCAATCATTATGCACCAAGCAATGACATGTATG...TATTTTAAATGTCAAGAAAGGTCCTGGTGTGAGCTGTGATGTGTGTTGAGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS GCA 72 bp | GCAGAAGGCTGCCATGGCCAACAGGAAGCCTTTGGCTaGTCTTGGGTCTGTATATCCGCCATAGCCATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEGCHGQQEAFG*SWVCISAIAIA Trigger: GGCTATGGCTATGGCGGATATACAGACCCAAGAGCAGCCAAAGGCTTCCTGTTGGCCATGGCAGCCTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS GCA 72 bp | TGTAGTCTGTTTCATAGTGGTCAGGGTCCGTCCTCTTaGCCTTTCCTGCTTTCCCCTTCGTGGGAGCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CSLFHSGQGPSS*PFLLSPSWEPF Trigger: AAAGGGCTCCCACGAAGGGGAAAGCAGGAAAGGGCAAGAGGACGGACCCTGACCACTATGAAACAGACTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000160859.8 |
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| CDS CAA 72 bp | GAGGAATCTCCTGGGCCACTTCAGGCACCAGAGGTGTaGACTTATAGAAAGACTCTGGGTATGATCGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: EESPGPLQAPEV*TYRKTLGMIAC Trigger: GCAAGCGATCATACCCAGAGTCTTTCTATAAGTCAACACCTCTGGTGCCTGAAGTGGCCCAGGAGATTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000159459.8 ENSMUST00000159515.2 ENSMUST00000160859.8 |
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| CDS CCA 72 bp | GTGAAGAATTTCATCTTCCGGATAAAAAGAGTACGCTaGCTGAGAGAGCATCGGCCGGACATGCATCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VKNFIFRIKRVR*LREHRPDMHLS Trigger: GGAGAGATGCATGTCCGGCCGATGCTCTCTCAGCCAGCGTACTCTTTTTATCCGGAAGATGAAATTCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CCA 72 bp | CACAATAATGAGCATAGACAGGATCCGGATCACCCCTaGGGGCGACGTCCATTTGTAGAAGTGAAGAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: HNNEHRQDPDHP*GRRPFVEVKNF Trigger: GAAATTCTTCACTTCTACAAATGGACGTCGCCCCCAGGGGTGATCCGGATCCTGTCTATGCTCATTATTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CCA 72 bp | ATATATATCTGTGAGCCGTACATAGATCCAGAAGCCTaGGCCGTCGGGTTCACTCCCATTATGTACACGATC | + |
|
Preference number: 6 (lower is better) Translates to: IYICEPYIDPEA*AVGFTPIMYTI Trigger: GATCGTGTACATAATGGGAGTGAACCCGACGGCCCAGGCTTCTGGATCTATGTACGGCTCACAGATATATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS TCA 72 bp | AGGAGTATAAAACTGGTTGCAGATCATATATATCTGTaGGCCGTACATAGATCCAGAAGCCTGGGCCGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSIKLVADHIYL*AVHRSRSLGRR Trigger: CCGACGGCCCAGGCTTCTGGATCTATGTACGGCTCACAGATATATATGATCTGCAACCAGTTTTATACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CAA 90 bp | GGCTATAGCCTCCTGGGGATCAACCACACAGTAGTGATACAAATATaGATCCACGTAGAGACCAGTACCTCCAGGAGTATAAAACTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GYSLLGINHTVVIQI*IHVETSTSRSIKLV Trigger: AACCAGTTTTATACTCCTGGAGGTACTGGTCTCTACGTGGATCAATATTTGTATCACTACTGTGTGGTTGATCCCCAGGAGGCTATAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CCA 72 bp | CCGGACATGCATCTCTCCGCCATACATGTCATTGCTTaGTGCATAATGATTGGGTTTGAATTCATCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PDMHLSAIHVIA*CIMIGFEFIRS Trigger: AGACCTGATGAATTCAAACCCAATCATTATGCACCAAGCAATGACATGTATGGCGGAGAGATGCATGTCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
||
| CDS CAA 72 bp | CTCCTGGGGATCAACCACACAGTAGTGATACAAATATaGATCCACGTAGAGACCAGTACCTCCAGGAGTATA | + |
|
Preference number: 6 (lower is better) Translates to: LLGINHTVVIQI*IHVETSTSRSI Trigger: TATACTCCTGGAGGTACTGGTCTCTACGTGGATCAATATTTGTATCACTACTGTGTGGTTGATCCCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022140.12 ENSMUST00000069756.11 ENSMUST00000160859.8 |
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