Pregenerated sensors for OCIAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029152Ensembl transcript IDs: ENSMUST00000031038.11, ENSMUST00000071081.13, ENSMUST00000166823.5, ENSMUST00000200935.4, ENSMUST00000201505.2, ENSMUST00000201556.4, ENSMUST00000201739.2, ENSMUST00000202237.4, ENSMUST00000202250.4
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCAGGGACGGGGGACAGGGATGGATCCACAGGGGCGACACTGGTaGGTGCTAAGTTTGATCTGGAGGGAGGATGACAACACACTCACA | + |
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Preference number: 1 (lower is better) Translates to: WQGRGTGMDPQGRHW*VLSLIWREDDNTLT Trigger: TGTGAGTGTGTTGTCATCCTCCCTCCAGATCAAACTTAGCACTCACCAGTGTCGCCCCTGTGGATCCATCCCTGTCCCCCGTCCCTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 90 bp | TGTAGTCAGGACCACTGGGTCTGCAACCCTCACTTGACTAGCCATTaGCACAAGTCCTTGGGCAAATCACTAAGCTTCTCTGAGCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: CSQDHWVCNPHLTSH*HKSLGKSLSFSEPC Trigger: ACAGGGCTCAGAGAAGCTTAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGACCCAGTGGTCCTGACTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR TCA 90 bp | CTGGTGTCTCAACTCCTCCTGTTCCTGGAATATACTTGGTATCTTTaGTCCCAACCAGAAGAACACGGGGGCCACCTTAGGATTAAGGTA | + |
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Preference number: 1 (lower is better) Translates to: LVSQLLLFLEYTWYL*SQPEEHGGHLRIKV Trigger: TACCTTAATCCTAAGGTGGCCCCCGTGTTCTTCTGGTTGGGATCAAAGATACCAAGTATATTCCAGGAACAGGAGGAGTTGAGACACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 90 bp | ATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCTaGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAATG | + |
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Preference number: 1 (lower is better) Translates to: MKSAAESKHVGTNDT*MKLDMEGRPSVGPM Trigger: CATTGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR GCA 90 bp | GAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTaGACACAACTATGGCATAAACCCACCGTTCTCAGTGCCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: EFHESLPVTENNFTK*TQLWHKPTVLSAQA Trigger: AGCCTGGGCACTGAGAACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR CCA 90 bp | GGGAGGATGACAACACACTCACAACCCCATAGCTGGACAGATGAATaGCTGCCTCGGAGGTCATTAGTCATATTAAGTATGGATCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: GRMTTHSQPHSWTDE*LPRRSLVILSMDLS Trigger: AGAAAGATCCATACTTAATATGACTAATGACCTCCGAGGCAGCCATTCATCTGTCCAGCTATGGGGTTGTGAGTGTGTTGTCATCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 90 bp | TCTCTCCCTGTAACTGAAAACAATTTCACCAAGTGCACACAACTATaGCATAAACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACA | + |
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Preference number: 1 (lower is better) Translates to: SLPVTENNFTKCTQL*HKPTVLSAQAGTFT Trigger: TGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR CCA 90 bp | GCAGGCCTTGCCCATCTTTGTTCTTTCACACCTAGCCAAGTATGTTaGATGAATGAAGAGACCAACAAAAAGAGCAGACATGCTGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: AGLAHLCSFTPSQVC*MNEETNKKSRHAES Trigger: TGACTCAGCATGTCTGCTCTTTTTGTTGGTCTCTTCATTCATCCAACATACTTGGCTAGGTGTGAAAGAACAAAGATGGGCAAGGCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR TCA 90 bp | CACAAACCAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTaGGTCCAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: HKPGFRFNCIYEICC*VQACRYKRHLDEAG Trigger: TCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTGGTTTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR TCA 90 bp | CACACAAGATTGGCAGAGATTTCACATTTTCTCCATGTGGAAAGCTaGCTGAAAACACTATGGCAGGATACTGAGAACATACTTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: HTRLAEISHFLHVES*LKTLWQDTENILYS Trigger: GCTGTAAAGTATGTTCTCAGTATCCTGCCATAGTGTTTTCAGTCAGCTTTCCACATGGAGAAAATGTGAAATCTCTGCCAATCTTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 90 bp | AAAATGAAACACAGACAAAGGACAAGAGCTGCCTTCATAGAAAGCTaGTGTCTCAACTCCTCCTGTTCCTGGAATATACTTGGTATCTTT | + |
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Preference number: 1 (lower is better) Translates to: KMKHRQRTRAAFIES*CLNSSCSWNILGIF Trigger: AAAGATACCAAGTATATTCCAGGAACAGGAGGAGTTGAGACACCAGCTTTCTATGAAGGCAGCTCTTGTCCTTTGTCTGTGTTTCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR TCA 90 bp | GCCACATCCAAACCAAGTGTCACACACAGGCTAATAATGAGCAACTaGAATGCTACCAAGACAACAAAAGATAACTTTGTATCTCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: ATSKPSVTHRLIMSN*NATKTTKDNFVSPL Trigger: TAAGGGAGATACAAAGTTATCTTTTGTTGTCTTGGTAGCATTTCAGTTGCTCATTATTAGCCTGTGTGTGACACTTGGTTTGGATGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 90 bp | CCTCGGAGGTCATTAGTCATATTAAGTATGGATCTTTCTCACTTGTaGGTAAAGACCAAAGAGACTTTTATCTGCTTTTACATGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: PRRSLVILSMDLSHL*VKTKETFICFYMEK Trigger: TTTTTCCATGTAAAAGCAGATAAAAGTCTCTTTGGTCTTTACCCACAAGTGAGAAAGATCCATACTTAATATGACTAATGACCTCCGAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR TCA 90 bp | AAATGGCAGGAAGGATGCACATCACTGCAACCAAGGACCTGGGCCAGCCTAAAAATCCCAACAGTTCTCTaGGAAGCATTACCACCTCCA | + |
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Preference number: 2 (lower is better) Translates to: KWQEGCTSLQPRTWASLKIPTVL*EALPPP Trigger: TGGAGGTGGTAATGCTTCTCAGAGAACTGTTGGGAT...TTTTAGGCTGGCCCAGGTCCTTGGTTGCAGTGATGTGCATCCTTCCTGCCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR TCA 90 bp | ACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAATTTCCTGCATGGGCCTaGCTGAGGGGTCAGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: THRSQCPGWYIYTIANIKFPAWA*LRGQSC Trigger: ACAAGACTGACCCCTCAGTCAGGCCCATGCAGGAAA...TTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201739.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAAACCCACCGTTCTCAGTaGCCAGGCTGGTACATTTAC | + |
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Preference number: 2 (lower is better) Translates to: THRSQCPGWYIYTIANIKTHRSQ*PGWYIY Trigger: GTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT...TTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTGCACATTGGGCACTCTTTCCTaGATGGGCCTGACTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VEFHESLPVTENNFTKCTLGTLS*MGLTEG Trigger: CCCCTCAGTCAGGCCCATGCAGGAAAGAGTGCCCAA...TGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201739.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTCATCACAAACATTAAGATGCTCGAGAAATGCTGGAGAAAGGCCTTTTCTGCATGGGCCTGACTaGGGGGTCAGTCTTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: FYSSQTLRCSRNAGERPFLHGPD*GVSLVG Trigger: CCCCACAAGACTGACCCCTCAGTCAGGCCCATGCAG...AAAAGGCCTTTCTCCAGCATTTCTCGAGCATCTTAATGTTTGTGATGAATAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000201739.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAACAATTTCACCAAGTGCACACAACTATGGCATAAACCCACCGTTCTCAACCCACCGTTCTCAGTaGCCAGGCTGGTACATTTAC | + |
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Preference number: 2 (lower is better) Translates to: LKTISPSAHNYGINPPFSTHRSQ*PGWYIY Trigger: GTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT...TGAGAACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCACCCACCGTTCTCAGTaGCCAGGCTGGTACATTTAC | + |
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Preference number: 2 (lower is better) Translates to: TVFMKSAAESKHVGTNDTTHRSQ*PGWYIY Trigger: GTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT...GGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAACAAACGACACCTGGATaGAGCTGGATATGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: THRSQCPGWYIYTIANIKQTTPG*SWIWKE Trigger: TTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTG...TTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTGCACAACCCACCGTTCTCAGTaGCCAGGCTGGTACATTTAC | + |
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Preference number: 2 (lower is better) Translates to: VEFHESLPVTENNFTKCTTHRSQ*PGWYIY Trigger: GTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT...TGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAAGGTACAAACGACACCTaGATGAAGCTGGATATGGAA | + |
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Preference number: 2 (lower is better) Translates to: THRSQCPGWYIYTIANIKGTNDT*MKLDME Trigger: TTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC...TTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCAACCCTCACTTGACTAGCCATTGGCACAAGTCCTTGGGCAAATCACTAGCAACGGATTTTAAGTaGATTTTCTTGCATGACAAC | + |
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Preference number: 2 (lower is better) Translates to: VCNPHLTSHWHKSLGKSLATDFK*IFLHDN Trigger: GTTGTCATGCAAGAAAATCCACTTAAAATCCGTTGC...TAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTGAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTGCCAAACGACACCTGGATaGAGCTGGATATGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TVEFHESLPVTENNFTKCQTTPG*SWIWKE Trigger: TTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTG...GCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTCAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR TCA 90 bp | AAACACTATGGCAGGATACTGAGAACATACTTTACAGCTCTGTGCAAGTTACTATGGATGAAGTTAGGCTaGCAGCAGACAGTAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: KHYGRILRTYFTALCKLLWMKLG*QQTVAE Trigger: CTCTGCTACTGTCTGCTGTCAGCCTAACTTCATCCA...TAGTAACTTGCACAGAGCTGTAAAGTATGTTCTCAGTATCCTGCCATAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR TCA 90 bp | CCTCGGAGGTCATTAGTCATATTAAGTATGGATCTTTCTCACTTGTGGGTAAAGAAAGAGCAGACATGCTaGGTCAGGCTGATGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: PRRSLVILSMDLSHLWVKKEQTC*VRLMDE Trigger: TTCATCCATCAGCCTGACTCAGCATGTCTGCTCTTT...CTTTACCCACAAGTGAGAAAGATCCATACTTAATATGACTAATGACCTCCGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCGGTACAAACGACACCTaGATGAAGCTGGATATGGAA | + |
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Preference number: 2 (lower is better) Translates to: TVFMKSAAESKHVGTNDTGTNDT*MKLDME Trigger: TTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC...GGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR CCA 90 bp | GTAACTGAAAACAATTTCACCAAGTGCACACAACTATGGCATAAACCCACCGTTGGTACAAACGACACCTaGATGAAGCTGGATATGGAA | + |
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Preference number: 2 (lower is better) Translates to: VTENNFTKCTQLWHKPTVGTNDT*MKLDME Trigger: TTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC...AACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTGCACATTGGGCTCAGGTCCTTaGGCAATATGGTCAGTAATA | + |
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Preference number: 2 (lower is better) Translates to: VEFHESLPVTENNFTKCTLGSGP*AIWSVI Trigger: TATTACTGACCATATTGCCCAAGGACCTGAGCCCAA...TGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201739.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTCAAACGACACCTGGATaGAGCTGGATATGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: DFVLTVFMKSAAESKHVGQTTPG*SWIWKE Trigger: TTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTG...ACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR CCA 90 bp | TCATCACAAACATTAAGATGCTCGAGAAATGCTGGAGAAAGGCCTTTTAATAACGGTACAAACGACACCTaGATGAAGCTGGATATGGAA | + |
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Preference number: 2 (lower is better) Translates to: SSQTLRCSRNAGERPFNNGTNDT*MKLDME Trigger: TTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC...GTTATTAAAAGGCCTTTCTCCAGCATTTCTCGAGCATCTTAATGTTTGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201739.2 |
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| 3UTR CAA 90 bp | AGAATGAAAGGAAGAGATCTAATATTTGCTGACTGCCTACTAGCATaGTGTCCAATTACTTCATCAAATCCCAACAGTTCTCTGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: RMKGRDLIFADCLLA*CPITSSNPNSSLRS Trigger: GCTTCTCAGAGAACTGTTGGGATTTGATGAAGTAATTGGACACAATGCTAGTAGGCAGTCAGCAAATATTAGATCTCTTCCTTTCATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CAA 90 bp | CTGCCTCGGAGGTCATTAGTCATATTAAGTATGGATCTTTCTCACTaGTGGGTAAAGACCAAAGAGACTTTTATCTGCTTTTACATGGAA | + |
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Preference number: 2 (lower is better) Translates to: LPRRSLVILSMDLSH*WVKTKETFICFYME Trigger: TTCCATGTAAAAGCAGATAAAAGTCTCTTTGGTCTTTACCCACAAGTGAGAAAGATCCATACTTAATATGACTAATGACCTCCGAGGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR TCA 90 bp | TTAGATGTCAGCCTTAATCTAAGGTTTTTACCTCACGTTTGCACCCTGGACTTTAGTATGTTGGATGAATaGAGAGACCAACAAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LDVSLNLRFLPHVCTLDFSMLDE*RDQQKE Trigger: CTCTTTTTGTTGGTCTCTTCATTCATCCAACATACT...AAAGTCCAGGGTGCAAACGTGAGGTAAAAACCTTAGATTAAGGCTGACATCTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTCATCACAAACATTAAGATGCTCGAGAAATGCTGGAGAAAGGCCTTTTGGTACAAACGACACCTaGATGAAGCTGGATATGGAA | + |
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Preference number: 2 (lower is better) Translates to: FYSSQTLRCSRNAGERPFGTNDT*MKLDME Trigger: TTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC...AAAAGGCCTTTCTCCAGCATTTCTCGAGCATCTTAATGTTTGTGATGAATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201739.2 |
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| 3UTR-3UTR CCA 90 bp | AAACACTATGGCAGGATACTGAGAACATACTTTACAGCTCTGTGCAAGTTACTAGATCTTTCTCACTTGTaGGTAAAGACCAAAGAGACT | + |
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Preference number: 2 (lower is better) Translates to: KHYGRILRTYFTALCKLLDLSHL*VKTKET Trigger: AGTCTCTTTGGTCTTTACCCACAAGTGAGAAAGATC...TAGTAACTTGCACAGAGCTGTAAAGTATGTTCTCAGTATCCTGCCATAGTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR CCA 90 bp | GTCCTAACTTCTGGTTTCCACAACTCTTGGTGTTTTAGGTTTTTAGATAAAGAACCTAGCCAAGTATGTTaGATGAATGAAGAGACCAAC | + |
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Preference number: 2 (lower is better) Translates to: VLTSGFHNSWCFRFLDKEPSQVC*MNEETN Trigger: GTTGGTCTCTTCATTCATCCAACATACTTGGCTAGG...TTCTTTATCTAAAAACCTAAAACACCAAGAGTTGTGGAAACCAGAAGTTAGGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCGGAGGTCATTAGTCATATTAAGTATGGATCTTTCTCACTTGTGGGTAAAGGGTTTCCACAACTCTTaGTGTTTTAGGTTTTTAGAT | + |
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Preference number: 2 (lower is better) Translates to: PRRSLVILSMDLSHLWVKGFHNS*CFRFLD Trigger: ATCTAAAAACCTAAAACACCAAGAGTTGTGGAAACC...CTTTACCCACAAGTGAGAAAGATCCATACTTAATATGACTAATGACCTCCGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR-3UTR GCA 90 bp | AAACACTATGGCAGGATACTGAGAACATACTTTACAGCTCTGTGCAAGTTACTATTAAGTGGATTTTCTTaGATGACAACAGCTATCACT | + |
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Preference number: 2 (lower is better) Translates to: KHYGRILRTYFTALCKLLLSGFS*MTTAIT Trigger: AGTGATAGCTGTTGTCATGCAAGAAAATCCACTTAA...TAGTAACTTGCACAGAGCTGTAAAGTATGTTCTCAGTATCCTGCCATAGTGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 72 bp | GGAGGGAGGATGACAACACACTCACAACCCCATAGCTaGACAGATGAATGGCTGCCTCGGAGGTCATTAGTC | + |
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Preference number: 3 (lower is better) Translates to: GGRMTTHSQPHS*TDEWLPRRSLV Trigger: GACTAATGACCTCCGAGGCAGCCATTCATCTGTCCAGCTATGGGGTTGTGAGTGTGTTGTCATCCTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR TCA 72 bp | GATGTAGTCAGGACCACTGGGTCTGCAACCCTCACTTaGCTAGCCATTGGCACAAGTCCTTGGGCAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: DVVRTTGSATLT*LAIGTSPWANH Trigger: GTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGACCCAGTGGTCCTGACTACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
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| 3UTR CCA 72 bp | TGGCAGGAAGGATGCACATCACTGCAACCAAGGACCTaGGCCAGCCTAAAATACAAGGTGAACAGGTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WQEGCTSLQPRT*ASLKYKVNRSE Trigger: TTCAGACCTGTTCACCTTGTATTTTAGGCTGGCCCAGGTCCTTGGTTGCAGTGATGTGCATCCTTCCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR CCA 72 bp | GACCACTGGGTCTGCAACCCTCACTTGACTAGCCATTaGCACAAGTCCTTGGGCAAATCACTAAGCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DHWVCNPHLTSH*HKSLGKSLSFS Trigger: AGAGAAGCTTAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGACCCAGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR TCA 72 bp | CAACTCCTCCTGTTCCTGGAATATACTTGGTATCTTTaGTCCCAACCAGAAGAACACGGGGGCCACCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLLLFLEYTWYL*SQPEEHGGHLR Trigger: CCTAAGGTGGCCCCCGTGTTCTTCTGGTTGGGATCAAAGATACCAAGTATATTCCAGGAACAGGAGGAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR TCA 72 bp | ACTCATTTCCCCTCCCAAGAGGTATCTTTAAAGTCCTaGTGTAGTCAGGACCACTGGGTCTGCAACCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: THFPSQEVSLKS*CSQDHWVCNPH Trigger: GTGAGGGTTGCAGACCCAGTGGTCCTGACTACATCAGGACTTTAAAGATACCTCTTGGGAGGGGAAATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR CCA 72 bp | GCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCTaGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AAESKHVGTNDT*MKLDMEGRPSV Trigger: TACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
||
| 3UTR CCA 72 bp | GTAACTGAAAACAATTTCACCAAGTGCACACAACTATaGCATAAACCCACCGTTCTCAGTGCCCAGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VTENNFTKCTQL*HKPTVLSAQAG Trigger: ACCAGCCTGGGCACTGAGAACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
||
| 3UTR CCA 72 bp | CACAGACAAAGGACAAGAGCTGCCTTCATAGAAAGCTaGTGTCTCAACTCCTCCTGTTCCTGGAATATACTT | + |
|
Preference number: 3 (lower is better) Translates to: HRQRTRAAFIES*CLNSSCSWNIL Trigger: AAGTATATTCCAGGAACAGGAGGAGTTGAGACACCAGCTTTCTATGAAGGCAGCTCTTGTCCTTTGTCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCTGCAACCCTCACTTGACTAGCCATTGGCACAAGTCCTTGGGCAAATCACTAATATACTTGGTATCTTaGATCCCAACCAGAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: VCNPHLTSHWHKSLGKSLIYLVS*IPTRRT Trigger: TGTTCTTCTGGTTGGGATCAAAGATACCAAGTATAT...TAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR GCA 72 bp | GAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTaGACACAACTATGGCATAAACCCACCGTTCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ESLPVTENNFTK*TQLWHKPTVLS Trigger: ACTGAGAACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000201739.2 |
||
| 3UTR CCA 72 bp | TTCATAGAAAGCTGGTGTCTCAACTCCTCCTGTTCCTaGAATATACTTGGTATCTTTGATCCCAACCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: FIESWCLNSSCS*NILGIFDPNQK Trigger: CTTCTGGTTGGGATCAAAGATACCAAGTATATTCCAGGAACAGGAGGAGTTGAGACACCAGCTTTCTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR GCA 72 bp | TATGGCAGGATACTGAGAACATACTTTACAGCTCTGTaGAAGTTACTAAGACCTGGAAGGAATAAGAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YGRILRTYFTAL*KLLRPGRNKKA Trigger: GGCTTTCTTATTCCTTCCAGGTCTTAGTAACTTGCACAGAGCTGTAAAGTATGTTCTCAGTATCCTGCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR CCA 72 bp | GCCCATCTTTGTTCTTTCACACCTAGCCAAGTATGTTaGATGAATGAAGAGACCAACAAAAAGAGCAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: AHLCSFTPSQVC*MNEETNKKSRH Trigger: ATGTCTGCTCTTTTTGTTGGTCTCTTCATTCATCCAACATACTTGGCTAGGTGTGAAAGAACAAAGATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR TCA 72 bp | TTGGCAGAGATTTCACATTTTCTCCATGTGGAAAGCTaGCTGAAAACACTATGGCAGGATACTGAGAACATA | + |
|
Preference number: 3 (lower is better) Translates to: LAEISHFLHVES*LKTLWQDTENI Trigger: TATGTTCTCAGTATCCTGCCATAGTGTTTTCAGTCAGCTTTCCACATGGAGAAAATGTGAAATCTCTGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR TCA 72 bp | CAGAGATTTCACATTTTCTCCATGTGGAAAGCTGACTaGAAACACTATGGCAGGATACTGAGAACATACTTT | + |
|
Preference number: 3 (lower is better) Translates to: QRFHIFSMWKAD*KHYGRILRTYF Trigger: AAAGTATGTTCTCAGTATCCTGCCATAGTGTTTTCAGTCAGCTTTCCACATGGAGAAAATGTGAAATCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR GCA 72 bp | GATGTCAGCCTTAATCTAAGGTTTTTACCTCACGTTTaGACCCTGGACTTTGTATTTACACAAACTTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DVSLNLRFLPHV*TLDFVFTQTLQ Trigger: TTGCAAAGTTTGTGTAAATACAAAGTCCAGGGTGCAAACGTGAGGTAAAAACCTTAGATTAAGGCTGACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR TCA 72 bp | TGTGTCCAATTACTTCATCAAATCCCAACAGTTCTCTaGGAAGCATTACCACCTCCATTCAAAATGCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: CVQLLHQIPTVL*EALPPPFKMQI Trigger: TATTTGCATTTTGAATGGAGGTGGTAATGCTTCTCAGAGAACTGTTGGGATTTGATGAAGTAATTGGACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACCAAGTATCTCCATATTaGTTTACTTTGAGTTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: VLTVFMKSAAESKHVGTNQVSPY*FTLSWT Trigger: GGTCCAACTCAAAGTAAACAAATATGGAGATACTTG...GTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071081.13 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTAACTTCTGGTTTCCACAACTCTTGGTGTTTTAGGTTTTTAGATAAAGAATTTGCACCCTGGACTTaGTATTTACACAAACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLTSGFHNSWCFRFLDKEFAPWT*YLHKLC Trigger: GCAAAGTTTGTGTAAATACAAAGTCCAGGGTGCAAA...TTCTTTATCTAAAAACCTAAAACACCAAGAGTTGTGGAAACCAGAAGTTAGGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR TCA 72 bp | AAACCAAGTGTCACACACAGGCTAATAATGAGCAACTaGAATGCTACCAAGACAACAAAAGATAACTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KPSVTHRLIMSN*NATKTTKDNFV Trigger: TACAAAGTTATCTTTTGTTGTCTTGGTAGCATTTCAGTTGCTCATTATTAGCCTGTGTGTGACACTTGGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR CAA 72 bp | GGGGCAAACAAGTCTCCAGCAAAAGTAGAAGGTGTCTaGGAAGGGACAGCAGCATCTGGGCAGAGCACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GANKSPAKVEGV*EGTAASGQSTG Trigger: CCCCGTGCTCTGCCCAGATGCTGCTGTCCCTTCCAAGACACCTTCTACTTTTGCTGGAGACTTGTTTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR TCA 90 bp | ACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAATGATGGGACTGCATGGGCCTGACTaGGGGGTCAGTCTTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TWMKLDMEGRPSVGPMMGLHGPD*GVSLVG Trigger: CCCCACAAGACTGACCCCTCAGTCAGGCCCATGCAG...TCCCATCATTGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031038.11 |
||
| CDS-3UTR TCA 90 bp | GGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTTTTCCTGCATGGGCCTaGCTGAGGGGTCAGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTNDTWMKLDMEGRPSVGFPAWA*LRGQSC Trigger: ACAAGACTGACCCCTCAGTCAGGCCCATGCAGGAAA...ACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031038.11 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGTTGGGCACTCTTTCCTaGATGGGCCTGACTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQACRYKRHLDEAGYGRKLGTLS*MGLTEG Trigger: CCCCTCAGTCAGGCCCATGCAGGAAAGAGTGCCCAA...CTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031038.11 |
||
| 3UTR CAA 72 bp | AAGCCTCTGCTCACCACAGGCAGAGCCATCACTTCTTaGCTGATTGTGAACATTCAGCCCTGGGCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPLLTTGRAITS*LIVNIQPWAIS Trigger: AGAGATTGCCCAGGGCTGAATGTTCACAATCAGCAAAGAAGTGATGGCTCTGCCTGTGGTGAGCAGAGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR GCA 90 bp | ACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAATGATGGGACTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWMKLDMEGRPSVGPMMGLFMAL*KESPLL Trigger: GAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAG...TCCCATCATTGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAGGAAGGATGCACATCACTGCAACCAAGGACCTGGGCCAGCCTAAAATTCTATGTTGTCTGCTaGTGGAGATGTCCCGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KWQEGCTSLQPRTWASLKFYVVC*WRCPER Trigger: TCTTTCGGGACATCTCCAGCAGCAGACAACATAGAA...TTTTAGGCTGGCCCAGGTCCTTGGTTGCAGTGATGTGCATCCTTCCTGCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CCA 90 bp | GTCTGCAACCCTCACTTGACTAGCCATTGGCACAAGTCCTTGGGCAAATCACTACAGAAGCACTCTTCATaGCACTCTGCAAAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCNPHLTSHWHKSLGKSLQKHSS*HSAKSL Trigger: GAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTG...TAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CCA 90 bp | ACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAATGATGGGATATGTTGTCTGCTGCTaGAGATGTCCCGAAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWMKLDMEGRPSVGPMMGYVVCC*RCPERG Trigger: TCCTCTTTCGGGACATCTCCAGCAGCAGACAACATA...TCCCATCATTGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| 3UTR CAA 72 bp | TGCAACCCTCACTTGACTAGCCATTGGCACAAGTCCTaGGGCAAATCACTAAGCTTCTCTGAGCCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CNPHLTSHWHKS*GKSLSFSEPCF Trigger: AAAACAGGGCTCAGAGAAGCTTAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR TCA 90 bp | CGACACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAATGATCATATTTGTTTACTTTaGCCTGGTGGAGAAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RHLDEAGYGRKAFSRSNDHICLL*PGGEER Trigger: GCGCTCTTCTCCACCAGGTCAAAGTAAACAAATATG...ATCATTGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201556.4 |
||
| CDS-3UTR GCA 90 bp | GTCTGCAACCCTCACTTGACTAGCCATTGGCACAAGTCCTTGGGCAAATCACTACTTTTCTATGTTGTCTaGTGCTGGAGATGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VCNPHLTSHWHKSLGKSLLFYVV*CWRCPE Trigger: TTCGGGACATCTCCAGCAGCAGACAACATAGAAAAG...TAGTGATTTGCCCAAGGACTTGTGCCAATGGCTAGTCAAGTGAGGGTTGCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CCA 90 bp | GTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTACAGAAGCACTCTTCATaGCACTCTGCAAAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTNDTWMKLDMEGRPSVQKHSS*HSAKSL Trigger: GAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTG...TACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CCA 90 bp | GGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTAGCACTAAATGGAATTaGCTCATAACGAGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTNDTWMKLDMEGRPSVGSTKWN*LITRKR Trigger: GCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCT...ACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR GCA 90 bp | TGCCACATCCAAACCAAGTGTCACACACAGGCTAATAATGAGCAACTGAAATGCCTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CHIQTKCHTQANNEQLKCLFMAL*KESPLL Trigger: GAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAG...GCATTTCAGTTGCTCATTATTAGCCTGTGTGTGACACTTGGTTTGGATGTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR GCA 90 bp | GTCCAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGTTCTATGTTGTCTGCTaGTGGAGATGTCCCGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQACRYKRHLDEAGYGRKFYVVC*WRCPER Trigger: TCTTTCGGGACATCTCCAGCAGCAGACAACATAGAA...CTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR GCA 90 bp | GAGTCCAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGACTTTTCTATGTTGTCTaGTGCTGGAGATGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESKHVGTNDTWMKLDMEGLFYVV*CWRCPE Trigger: TTCGGGACATCTCCAGCAGCAGACAACATAGAAAAG...TCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCCTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVFMKSAAESKHVGTNDTLFMAL*KESPLL Trigger: GAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAG...GGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAACAATTTCACCAAGTGCACACAACTATGGCATAAACCCACCGTTCTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTENNFTKCTQLWHKPTVLFMAL*KESPLL Trigger: GAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAG...AACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CCA 90 bp | CACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAATCTCAGAAGCACTCTTCATaGCACTCTGCAAAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HRSQCPGWYIYTIANIKSQKHSS*HSAKSL Trigger: GAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTG...AGATTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CCA 90 bp | CCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAATCTTGGGCTCAGGTCCTTaGGCAATATGGTCAGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: PPFSVPRLVHLHNSKHKILGSGP*AIWSVI Trigger: TATTACTGACCATATTGCCCAAGGACCTGAGCCCAA...GATTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031038.11 |
||
| 3UTR CAA 72 bp | CAAACTAACAAGAAGCCCAAACTGACAAAGCAGGCCTaGCCCATCTTTGTTCTTTCACACCTAGCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QTNKKPKLTKQA*PIFVLSHLAKY Trigger: ATACTTGGCTAGGTGTGAAAGAACAAAGATGGGCAAGGCCTGCTTTGTCAGTTTGGGCTTCTTGTTAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR TCA 90 bp | GTCCAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGAACCATATTTTGGATaGCTTGACAGGATTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VQACRYKRHLDEAGYGRKEPYFG*LDRIPL Trigger: TAAAGGAATCCTGTCAAGTCATCCAAAATATGGTTC...CTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CCA 90 bp | GTAACTGAAAACAATTTCACCAAGTGCACACAACTATGGCATAAACCCACCGTTCAGAAGCACTCTTCATaGCACTCTGCAAAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTENNFTKCTQLWHKPTVQKHSS*HSAKSL Trigger: GAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTG...AACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR GCA 90 bp | CAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTACTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QDFVLTVFMKSAAESKHVLFMAL*KESPLL Trigger: GAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAG...TACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAACAATTTCACCAAGTGCACACAACTATGGCATAAACCCACCGTTTTCTATGTTGTCTGCTaGTGGAGATGTCCCGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTENNFTKCTQLWHKPTVFYVVC*WRCPER Trigger: TCTTTCGGGACATCTCCAGCAGCAGACAACATAGAA...AACGGTGGGTTTATGCCATAGTTGTGTGCACTTGGTGAAATTGTTTTCAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CCA 90 bp | CCTCGGAGGTCATTAGTCATATTAAGTATGGATCTTTCTCACTTGTGGGTAAAGAGCACTAAATGGAATTaGCTCATAACGAGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PRRSLVILSMDLSHLWVKSTKWN*LITRKR Trigger: GCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCT...CTTTACCCACAAGTGAGAAAGATCCATACTTAATATGACTAATGACCTCCGAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CCA 90 bp | TTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCTGGATGCATAGAAGCACTAAATaGAATTGGCTCATAACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FMKSAAESKHVGTNDTWMHRSTK*NWLITR Trigger: CCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATG...CATCCAGGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAATCTGAGTCTGTAAAGAGCACTAAATGGAATTaGCTCATAACGAGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: CPGWYIYTIANIKSESVKSTKWN*LITRKR Trigger: GCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCT...CTTTACAGACTCAGATTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR GCA 90 bp | TACACAAACCAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCCTTTTCTATGTTGTCTaGTGCTGGAGATGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTNQDFVLTVFMKSAAESLFYVV*CWRCPE Trigger: TTCGGGACATCTCCAGCAGCAGACAACATAGAAAAG...GGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTGGTTTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR GCA 90 bp | TCATCACAAACATTAAGATGCTCGAGAAATGCTGGAGAAAGGCCTTTTAATAACCTTTTCTATGTTGTCTaGTGCTGGAGATGTCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSQTLRCSRNAGERPFNNLFYVV*CWRCPE Trigger: TTCGGGACATCTCCAGCAGCAGACAACATAGAAAAG...GTTATTAAAAGGCCTTTCTCCAGCATTTCTCGAGCATCTTAATGTTTGTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CCA 90 bp | GATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTAGCACTAAATGGAATTaGCTCATAACGAGGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DFVLTVFMKSAAESKHVGSTKWN*LITRKR Trigger: GCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCT...ACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR TCA 90 bp | AGAGTCACAGTTGAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCGAACCATATTTTGGATaGCTTGACAGGATTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RVTVEFHESLPVTENNFTEPYFG*LDRIPL Trigger: TAAAGGAATCCTGTCAAGTCATCCAAAATATGGTTC...GGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTCAACTGTGACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| 3UTR CAA 72 bp | CACGTTTGCACCCTGGACTTTGTATTTACACAAACTTaGCAACGGATTTTAAGTGGATTTTCTTGCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: HVCTLDFVFTQT*QRILSGFSCMT Trigger: TGTCATGCAAGAAAATCCACTTAAAATCCGTTGCAAAGTTTGTGTAAATACAAAGTCCAGGGTGCAAACGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR CAA 72 bp | GGAAGAGATCTAATATTTGCTGACTGCCTACTAGCATaGTGTCCAATTACTTCATCAAATCCCAACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRDLIFADCLLA*CPITSSNPNSS Trigger: AGAACTGTTGGGATTTGATGAAGTAATTGGACACAATGCTAGTAGGCAGTCAGCAAATATTAGATCTCTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR TCA 90 bp | AAACACTATGGCAGGATACTGAGAACATACTTTACAGCTCTGTGCAAGTTACTAGAACCATATTTTGGATaGCTTGACAGGATTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KHYGRILRTYFTALCKLLEPYFG*LDRIPL Trigger: TAAAGGAATCCTGTCAAGTCATCCAAAATATGGTTC...TAGTAACTTGCACAGAGCTGTAAAGTATGTTCTCAGTATCCTGCCATAGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR TCA 90 bp | GTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACCTGACCACTCACATTTaGGTCAAATTTAGGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVFMKSAAESKHVGTNLTTHI*VKFRLL Trigger: CAAAAGCCTAAATTTGACTCAAATGTGAGTGGTCAG...GTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CCA 90 bp | TCATCACAAACATTAAGATGCTCGAGAAATGCTGGAGAAAGGCCTTTTAATAACCATAGAAGCACTAAATaGAATTGGCTCATAACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSQTLRCSRNAGERPFNNHRSTK*NWLITR Trigger: CCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATG...GTTATTAAAAGGCCTTTCTCCAGCATTTCTCGAGCATCTTAATGTTTGTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CCA 90 bp | GATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTCATAGAAGCACTAAATaGAATTGGCTCATAACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFVLTVFMKSAAESKHVGHRSTK*NWLITR Trigger: CCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATG...ACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR TCA 90 bp | CAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGAACCATATTTTGGATaGCTTGACAGGATTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QDFVLTVFMKSAAESKHVEPYFG*LDRIPL Trigger: TAAAGGAATCCTGTCAAGTCATCCAAAATATGGTTC...TACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CCA 90 bp | CAAAACAAAGCCAAAACCATAACTGTTGCTAAATTAGCCCTCGAAATTATTGTCCATAGAAGCACTAAATaGAATTGGCTCATAACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNKAKTITVAKLALEIIVHRSTK*NWLITR Trigger: CCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATG...GACAATAATTTCGAGGGCTAATTTAGCAACAGTTATGGTTTTGGCTTTGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| 3UTR CAA 72 bp | AGGTCATTAGTCATATTAAGTATGGATCTTTCTCACTaGTGGGTAAAGACCAAAGAGACTTTTATCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSLVILSMDLSH*WVKTKETFICF Trigger: AAAGCAGATAAAAGTCTCTTTGGTCTTTACCCACAAGTGAGAAAGATCCATACTTAATATGACTAATGACCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS GCA 90 bp | AGCCAACGGCACAGATCTGAACCAGAAGCACTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTCCTCTGTCGGAATATAACCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQRHRSEPEALFMAL*KESPLLLCRNITAS Trigger: GGAGGCGGTTATATTCCGACAGAGGAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTGGTTCAGATCTGTGCCGTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000202250.4 |
||
| CDS TCA 90 bp | CTCCTCTGTCGGAATATAACCGCCTCCTATGTCGGGAATAGGTCTTaGCACTTGTGCATTCGGTTCTCGAAAATCAGCCCTCCCATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLCRNITASYVGNRS*HLCIRFSKISPPIH Trigger: ATGAATGGGAGGGCTGATTTTCGAGAACCGAATGCACAAGTGTCAAGACCTATTCCCGACATAGGAGGCGGTTATATTCCGACAGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000201505.2 ENSMUST00000201556.4 ENSMUST00000202250.4 |
||
| CDS TCA 90 bp | GTCTGCTGCTGGAGATGTCCCGAAAGAGGACTGACCACTCACATTTaGGTCAAATTTAGGCTTTTGAGTATAGTGCCCTGGTGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VCCWRCPERGLTTHI*VKFRLLSIVPWWRR Trigger: TCTTCTCCACCAGGGCACTATACTCAAAAGCCTAAATTTGACTCAAATGTGAGTGGTCAGTCCTCTTTCGGGACATCTCCAGCAGCAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000202237.4 ENSMUST00000202250.4 |
||
| CDS CCA 90 bp | AATACCAGTGGGAGTGGACTCGTTCATAGAAGCACTAAATGGAATTaGCTCATAACGAGGAAGCGCCTCCTTTTCTATGTTGTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTSGSGLVHRSTKWN*LITRKRLLFYVVCC Trigger: GCAGCAGACAACATAGAAAAGGAGGCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATGAACGAGTCCACTCCCACTGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000202237.4 ENSMUST00000202250.4 |
||
| CDS-3UTR CAA 90 bp | ACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAATGATGGGAGAGTTTTCAAGCTTCTaGAACTTCTCTTGGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: TWMKLDMEGRPSVGPMMGEFSSF*NFSWHV Trigger: AACGTGCCAAGAGAAGTTCAAGAAGCTTGAAAACTC...TCCCATCATTGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS CCA 90 bp | GTCAGTAATACCAGTGGGAGTGGACTCGTTCATAGAAGCACTAAATaGAATTGGCTCATAACGAGGAAGCGCCTCCTTTTCTATGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSNTSGSGLVHRSTK*NWLITRKRLLFYVV Trigger: GACAACATAGAAAAGGAGGCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATGAACGAGTCCACTCCCACTGGTATTACTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000202237.4 ENSMUST00000202250.4 |
||
| CDS-3UTR CAA 90 bp | AAATGGCAGGAAGGATGCACATCACTGCAACCAAGGACCTGGGCCAGCCTAAAAGAATTGAACCATATTTaGGATGACTTGACAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: KWQEGCTSLQPRTWASLKELNHI*DDLTGF Trigger: GAATCCTGTCAAGTCATCCAAAATATGGTTCAATTC...TTTTAGGCTGGCCCAGGTCCTTGGTTGCAGTGATGTGCATCCTTCCTGCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CAA 90 bp | GTCCAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGAGTTTTCAAGCTTCTaGAACTTCTCTTGGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: VQACRYKRHLDEAGYGRKEFSSF*NFSWHV Trigger: AACGTGCCAAGAGAAGTTCAAGAAGCTTGAAAACTC...CTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | CACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAATCTACTGAGGGGTCAGTCTaGTGGGGTAAAGTTACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRSQCPGWYIYTIANIKSTEGSV*WGKVTP Trigger: TGGAGTAACTTTACCCCACAAGACTGACCCCTCAGT...AGATTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031038.11 |
||
| CDS-3UTR CAA 90 bp | CAAGCATGTAGGTACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGCCAGAGAAGTTTCTACCTaGGGCAATATGGTCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QACRYKRHLDEAGYGRKAREVST*GNMVSN Trigger: ATTACTGACCATATTGCCCAAGGTAGAAACTTCTCT...GGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGTACCTACATGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071081.13 |
||
| CDS-3UTR CAA 90 bp | ACAAACGACACCTGGATGAAGCTGGATATGGAAGGAAGGCCTTCAGTAGGTCCAGAATTGAACCATATTTaGGATGACTTGACAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: TNDTWMKLDMEGRPSVGPELNHI*DDLTGF Trigger: GAATCCTGTCAAGTCATCCAAAATATGGTTCAATTC...TGGACCTACTGAAGGCCTTCCTTCCATATCCAGCTTCATCCAGGTGTCGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | AACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAGTCAAATTTAGGCTTTaGAGTATAGTGCCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NPPFSVPRLVHLHNSKHKVKFRL*SIVPWW Trigger: CCACCAGGGCACTATACTCAAAAGCCTAAATTTGAC...TTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CAA 90 bp | CCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAATCCTTCTTGAACTTCTCTaGGCACGTTTTCACGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PPFSVPRLVHLHNSKHKILLELL*ARFHVR Trigger: TCTTACGTGAAAACGTGCCAAGAGAAGTTCAAGAAG...GATTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | AACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAGAGTTTTCAAGCTTCTaGAACTTCTCTTGGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: NPPFSVPRLVHLHNSKHKEFSSF*NFSWHV Trigger: AACGTGCCAAGAGAAGTTCAAGAAGCTTGAAAACTC...TTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | AAACTGACAAAGCAGGCCTTGCCCATCTTTGTTCTTTCACACCTAGCCAAGTATGAGTTTTCAAGCTTCTaGAACTTCTCTTGGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLTKQALPIFVLSHLAKYEFSSF*NFSWHV Trigger: AACGTGCCAAGAGAAGTTCAAGAAGCTTGAAAACTC...ATACTTGGCTAGGTGTGAAAGAACAAAGATGGGCAAGGCCTGCTTTGTCAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CAA 90 bp | ACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGGTACAAACGACACCCCATATTTGTTTACTTaGACCTGGTGGAGAAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TVFMKSAAESKHVGTNDTPYLFT*TWWRRA Trigger: CGCTCTTCTCCACCAGGTCAAAGTAAACAAATATGG...GGTGTCGTTTGTACCTACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | GTTGAGTTTCATGAGTCTCTCCCTGTAACTGAAAACAATTTCACCAAGTGCACAGTCAAATTTAGGCTTTaGAGTATAGTGCCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VEFHESLPVTENNFTKCTVKFRL*SIVPWW Trigger: CCACCAGGGCACTATACTCAAAAGCCTAAATTTGAC...TGTGCACTTGGTGAAATTGTTTTCAGTTACAGGGAGAGACTCATGAAACTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CAA 90 bp | TTAGATGTCAGCCTTAATCTAAGGTTTTTACCTCACGTTTGCACCCTGGACTTTGTCAAATTTAGGCTTTaGAGTATAGTGCCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LDVSLNLRFLPHVCTLDFVKFRL*SIVPWW Trigger: CCACCAGGGCACTATACTCAAAAGCCTAAATTTGAC...AAAGTCCAGGGTGCAAACGTGAGGTAAAAACCTTAGATTAAGGCTGACATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CAA 90 bp | ACCCACCGTTCTCAGTGCCCAGGCTGGTACATTTACACAATAGCAAACATAAAAGAATTGAACCATATTTaGGATGACTTGACAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: THRSQCPGWYIYTIANIKELNHI*DDLTGF Trigger: GAATCCTGTCAAGTCATCCAAAATATGGTTCAATTC...TTTTATGTTTGCTATTGTGTAAATGTACCAGCCTGGGCACTGAGAACGGTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | CAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGTCAAATTTAGGCTTTaGAGTATAGTGCCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDFVLTVFMKSAAESKHVVKFRL*SIVPWW Trigger: CCACCAGGGCACTATACTCAAAAGCCTAAATTTGAC...TACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 |
||
| CDS-3UTR CAA 90 bp | GAGGTGAGATCCAGCAGAAAAGAGCATCAAATAAAGTGTATACATACGTTGGACAGAGAAGTTTCTACCTaGGGCAATATGGTCAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: EVRSSRKEHQIKCIHTLDREVST*GNMVSN Trigger: ATTACTGACCATATTGCCCAAGGTAGAAACTTCTCT...GTCCAACGTATGTATACACTTTATTTGATGCTCTTTTCTGCTGGATCTCACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166823.5 |
||
| CDS-3UTR CAA 90 bp | CAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGAGTTTTCAAGCTTCTaGAACTTCTCTTGGCACGTT | + |
|
Preference number: 5 (lower is better) Translates to: QDFVLTVFMKSAAESKHVEFSSF*NFSWHV Trigger: AACGTGCCAAGAGAAGTTCAAGAAGCTTGAAAACTC...TACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | TACACAAACCAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCCAAGTATCTCCATATTaGTTTACTTTGACCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTNQDFVLTVFMKSAAESQVSPY*FTLTWW Trigger: CCACCAGGTCAAAGTAAACAAATATGGAGATACTTG...GGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTGGTTTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | CAGGATTTCGTTTTAACTGTATTTATGAAATCTGCTGCTGAGTCCAAGCATGTAGAATTGAACCATATTTaGGATGACTTGACAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: QDFVLTVFMKSAAESKHVELNHI*DDLTGF Trigger: GAATCCTGTCAAGTCATCCAAAATATGGTTCAATTC...TACATGCTTGGACTCAGCAGCAGATTTCATAAATACAGTTAAAACGAAATCCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000200935.4 ENSMUST00000201556.4 |
||
| CDS-3UTR CAA 90 bp | TCATCACAAACATTAAGATGCTCGAGAAATGCTGGAGAAAGGCCTTTTAATAACCAAGTATCTCCATATTaGTTTACTTTGACTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSQTLRCSRNAGERPFNNQVSPY*FTLTWA Trigger: TGCCCAAGTCAAAGTAAACAAATATGGAGATACTTG...GTTATTAAAAGGCCTTTCTCCAGCATTTCTCGAGCATCTTAATGTTTGTGATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200935.4 |
||
| CDS CCA 72 bp | GCCAACGGCACAGATCTGAACCAGAAGCACTCTTCATaGCACTCTGCAAAGAGTCTCCACTCCTCCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ANGTDLNQKHSS*HSAKSLHSSSV Trigger: GACAGAGGAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTGGTTCAGATCTGTGCCGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000202250.4 |
||
| CDS GCA 72 bp | CTCATAACGAGGAAGCGCCTCCTTTTCTATGTTGTCTaGTGCTGGAGATGTCCCGAAAGAGGACTGACCACT | + |
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Preference number: 6 (lower is better) Translates to: LITRKRLLFYVV*CWRCPERGLTT Trigger: AGTGGTCAGTCCTCTTTCGGGACATCTCCAGCAGCAGACAACATAGAAAAGGAGGCGCTTCCTCGTTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000202237.4 ENSMUST00000202250.4 |
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| CDS TCA 72 bp | CGGAATATAACCGCCTCCTATGTCGGGAATAGGTCTTaGCACTTGTGCATTCGGTTCTCGAAAATCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RNITASYVGNRS*HLCIRFSKISP Trigger: AGGGCTGATTTTCGAGAACCGAATGCACAAGTGTCAAGACCTATTCCCGACATAGGAGGCGGTTATATTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000201505.2 ENSMUST00000201556.4 ENSMUST00000202250.4 |
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| CDS GCA 72 bp | CACAGATCTGAACCAGAAGCACTCTTCATGGCACTCTaGAAAGAGTCTCCACTCCTCCTCTGTCGGAATATA | + |
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Preference number: 6 (lower is better) Translates to: HRSEPEALFMAL*KESPLLLCRNI Trigger: TATATTCCGACAGAGGAGGAGTGGAGACTCTTTGCAGAGTGCCATGAAGAGTGCTTCTGGTTCAGATCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000201556.4 ENSMUST00000202250.4 |
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| CDS CCA 72 bp | ACCAGTGGGAGTGGACTCGTTCATAGAAGCACTAAATaGAATTGGCTCATAACGAGGAAGCGCCTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSGSGLVHRSTK*NWLITRKRLLF Trigger: GAAAAGGAGGCGCTTCCTCGTTATGAGCCAATTCCATTTAGTGCTTCTATGAACGAGTCCACTCCCACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000202237.4 ENSMUST00000202250.4 |
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| CDS TCA 72 bp | TGGAGATGTCCCGAAAGAGGACTGACCACTCACATTTaGGTCAAATTTAGGCTTTTGAGTATAGTGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WRCPERGLTTHI*VKFRLLSIVPW Trigger: CCAGGGCACTATACTCAAAAGCCTAAATTTGACTCAAATGTGAGTGGTCAGTCCTCTTTCGGGACATCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000031038.11 ENSMUST00000071081.13 ENSMUST00000166823.5 ENSMUST00000200935.4 ENSMUST00000202237.4 ENSMUST00000202250.4 |
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| CDS TCA 72 bp | CATAACGAGGAAGCGCCTCCTTTACTAATTAATCCTTaGGTAATCAGCATACTTGTGGCAGCCAACGGCACA | + |
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Preference number: 6 (lower is better) Translates to: HNEEAPPLLINP*VISILVAANGT Trigger: TGTGCCGTTGGCTGCCACAAGTATGCTGATTACTCAAGGATTAATTAGTAAAGGAGGCGCTTCCTCGTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201739.2 |
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