Pregenerated sensors for OCEL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002396Ensembl transcript IDs: ENSMUST00000002469.9, ENSMUST00000110051.2, ENSMUST00000110052.2
Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACGGGGCCGCCAGTGTCCGAGCTGATTGCGCAGCTGCTGCGTGCTaGGCCCTACCCCGCGGCCGGACGCTTTGGTGGCGGCGGCGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: HGAASVRADCAAAAC*ALPRGRTLWWRRRC Trigger: ACAGCGCCGCCGCCACCAAAGCGTCCGGCCGCGGGGTAGGGCTCAGCACGCAGCAGCTGCGCAATCAGCTCGGACACTGGCGGCCCCGTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | GGGGTGGTCTTCCCACGCTGCCACCTGACGTGCCCTGTTTCCCTCTaGAGCCGTGCAGCGAGGCCGCATCCCGCATGCGCTCCCCGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: GVVFPRCHLTCPVSL*SRAARPHPACAPRS Trigger: GGACCGGGGAGCGCATGCGGGATGCGGCCTCGCTGCACGGCTGCAGAGGGAAACAGGGCACGTCAGGTGGCAGCGTGGGAAGACCACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | GTGGACAAGCTGGGCCGCCTGCAGGTGGATGCTGCGGAGTACGGCTaGCTCAAGGCCATCGCGCTCTTCACGCCTGGTGAGCCGCCCCGC | + |
|
Preference number: 1 (lower is better) Translates to: VDKLGRLQVDAAEYG*LKAIALFTPGEPPR Trigger: GCGGGGCGGCTCACCAGGCGTGAAGAGCGCGATGGCCTTGAGGCAGCCGTACTCCGCAGCATCCACCTGCAGGCGGCCCAGCTTGTCCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | TGGCCTCACGGGGTGGGGGTGGTCTTCCCACGCTGCCACCTGACGTaGCCTGTTTCCCTCTGCAGCCGTGCAGCGAGGCCGCATCCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: WPHGVGVVFPRCHLT*PVSLCSRAARPHPA Trigger: TGCGGGATGCGGCCTCGCTGCACGGCTGCAGAGGGAAACAGGGCACGTCAGGTGGCAGCGTGGGAAGACCACCCCCACCCCGTGAGGCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | AGCCCTACCCCGCGGCCGGACGCTTTGGTGGCGGCGGCGCTGTACTaGGCATCGACAACGTGTGCGAGTTGGCGGCACGCCTGCTGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: SPTPRPDALVAAALY*ASTTCASWRHACCS Trigger: TGAACAGCAGGCGTGCCGCCAACTCGCACACGTTGTCGATGCCCAGTACAGCGCCGCCGCCACCAAAGCGTCCGGCCGCGGGGTAGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | TTAGGGCCTGGCCAGTTCCGCCTGGCCGCCCTGATCCCCCATCACTaGTTGGCTGCTGGCTTTGTTCTGGCTTTGCCTGAGTTCTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: LGPGQFRLAALIPHH*LAAGFVLALPEFSL Trigger: CAGAGAGAACTCAGGCAAAGCCAGAACAAAGCCAGCAGCCAAGCAGTGATGGGGGATCAGGGCGGCCAGGCGGAACTGGCCAGGCCCTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | CAGACTGCACAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTaGAGGCAGCCACTCAGAGCCCTATGGATCGGGTGCCTGGGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: QTAQLGLRSLQSSAT*RQPLRALWIGCLGC Trigger: GCAGCCCAGGCACCCGATCCATAGGGCTCTGAGTGGCTGCCTCCAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 90 bp | CCACACACCAGACTCCCAACTGGACCAAAGGCCACTCCCTCAGACTaGCCACGCCCCCATTGTCATTGCCCCAACTCAGCCTCAGGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: PHTRLPTGPKATPSD*PRPHCHCPNSASGN Trigger: GTTGCCTGAGGCTGAGTTGGGGCAATGACAATGGGGGCGTGGTCAGTCTGAGGGAGTGGCCTTTGGTCCAGTTGGGAGTCTGGTGTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | AGGAGCTGTCCTGGAGCCCACAGAACCTCTCAGCTCAATGGCTGCTaGATGGGGCAGCAGCCAGAGGGTGATATAGGAACAGGCTGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: RSCPGAHRTSQLNGC*MGQQPEGDIGTGWE Trigger: CTCCCAGCCTGTTCCTATATCACCCTCTGGCTGCTGCCCCATGCAGCAGCCATTGAGCTGAGAGGTTCTGTGGGCTCCAGGACAGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 90 bp | CAAAGGGAGGGTCTTGGGCCATTTGAAGCCCAGTCTGGCTCCAGCTaGCAGGCGGTTCCCAGGTTCTCTATGTTTGGCCTGGGTGCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: QREGLGPFEAQSGSS*QAVPRFSMFGLGAS Trigger: TGAGGCACCCAGGCCAAACATAGAGAACCTGGGAACCGCCTGTCAGCTGGAGCCAGACTGGGCTTCAAATGGCCCAAGACCCTCCCTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | GGCTGCCAAGGGGAGACTCAGTTGCCTATCCCTGCCCATGAGACCTaGGGAGACAGACTGCACAGCTGGGCCTCAGATCCTTACAGTCAA | + |
|
Preference number: 1 (lower is better) Translates to: GCQGETQLPIPAHET*GDRLHSWASDPYSQ Trigger: TTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGTCTCCCCTTGGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | AGACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTaGACAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: RLSCLSLPMRPGETD*TAGPQILTVKCNLE Trigger: CTCCAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | GTATGTACCACCATAGGCAAAGCTAACAATGGCAGCCCCTGCTCTTaGGGACCACTACCGGTGCCATGCTGCATTAGCGATGTGGTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: VCTTIGKANNGSPCS*GPLPVPCCISDVVP Trigger: GGGGACCACATCGCTAATGCAGCATGGCACCGGTAGTGGTCCCCAAGAGCAGGGGCTGCCATTGTTAGCTTTGCCTATGGTGGTACATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | TGGCAGGTATGTACCACCATAGGCAAAGCTAACAATGGCAGCCCCTaGTCTTGGGGACCACTACCGGTGCCATGCTGCATTAGCGATGTG | + |
|
Preference number: 1 (lower is better) Translates to: WQVCTTIGKANNGSP*SWGPLPVPCCISDV Trigger: CACATCGCTAATGCAGCATGGCACCGGTAGTGGTCCCCAAGAGCAGGGGCTGCCATTGTTAGCTTTGCCTATGGTGGTACATACCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | AGGAGACTCCTGGCCTGCAAGTGGCCTGGGACTTGTCATCCTCAGTaGCTCAGGTTAGTTTCATCTGAGGAGCTATGCAGAGTGGACAGG | + |
|
Preference number: 1 (lower is better) Translates to: RRLLACKWPGTCHPQ*LRLVSSEELCRVDR Trigger: CCTGTCCACTCTGCATAGCTCCTCAGATGAAACTAACCTGAGCCACTGAGGATGACAAGTCCCAGGCCACTTGCAGGCCAGGAGTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CCA 90 bp | GACCTTCAACAGTCTGGAGCCAGCATGCTGATGCCTCTGGTGTCATaGGTATCTGGAAAGGCCACTGCAGCTAGGCAGGAGTACTATGGG | + |
|
Preference number: 1 (lower is better) Translates to: DLQQSGASMLMPLVS*VSGKATAARQEYYG Trigger: CCCATAGTACTCCTGCCTAGCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 90 bp | ATTGCAAGTAGCGGGAGAGGCCAGAGACAGAAGCTGAGTTCTCAGTaGTTGACAGATGTGGCCTCCACGTTGCAAGAGGAGGTGCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: IASSGRGQRQKLSSQ*LTDVASTLQEEVQL Trigger: CAGCTGCACCTCCTCTTGCAACGTGGAGGCCACATCTGTCAATCACTGAGAACTCAGCTTCTGTCTCTGGCCTCTCCCGCTACTTGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 90 bp | TGGGCCAGCCTGGGAGGTACATCATGTAACAGGCTTCTGAGAACCTaGCAGTCAGGCATAGTGGTGCATGCAGGCTTGTCATCCCAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: WASLGGTSCNRLLRT*QSGIVVHAGLSSQH Trigger: ATGCTGGGATGACAAGCCTGCATGCACCACTATGCCTGACTGTCAGGTTCTCAGAAGCCTGTTACATGATGTACCTCCCAGGCTGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | CAGGCCACACCTCAGGGGCCATTCTCTCTGATGACATGCCTTTGCTaGGGTAGGGGAAGACAGTACAACATCTTAGAGACCCTGAGATGT | + |
|
Preference number: 1 (lower is better) Translates to: QATPQGPFSLMTCLC*GRGRQYNILETLRC Trigger: ACATCTCAGGGTCTCTAAGATGTTGTACTGTCTTCCCCTACCGCAGCAAAGGCATGTCATCAGAGAGAATGGCCCCTGAGGTGTGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 90 bp | ACGCCTGATGTCACTCCATCATGCCCTCAAACTAATCCAGACCTCTaGGCTCCTGCCTCTGTTCTGTTCTGTTCCATATTCCACAGGGCC | + |
|
Preference number: 1 (lower is better) Translates to: TPDVTPSCPQTNPDL*APASVLFCSIFHRA Trigger: GGCCCTGTGGAATATGGAACAGAACAGAACAGAGGCAGGAGCTCAGAGGTCTGGATTAGTTTGAGGGCATGATGGAGTGACATCAGGCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 90 bp | GGTGATATAGGAACAGGCTGGGAGGAGAGGCCAGCGCCTAGAGCTTaGTTTCTGCCTCTTATTTCTACTCCAGGTCTGGAGGCTTTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: GDIGTGWEERPAPRA*FLPLISTPGLEAFW Trigger: CCAAAAAGCCTCCAGACCTGGAGTAGAAATAAGAGGCAGAAATCAAGCTCTAGGCGCTGGCCTCTCCTCCCAGCCTGTTCCTATATCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 90 bp | TCTGTTCTGTTCTGTTCCATATTCCACAGGGCCATGCCGCTTGGGTaGAGGATACAGCTAATGACCCTAGGTTTTATCCCAGGCCACACC | + |
|
Preference number: 1 (lower is better) Translates to: SVLFCSIFHRAMPLG*RIQLMTLGFIPGHT Trigger: GGTGTGGCCTGGGATAAAACCTAGGGTCATTAGCTGTATCCTGCACCCAAGCGGCATGGCCCTGTGGAATATGGAACAGAACAGAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | CTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTaGCCTGGGACTTGTCATCCTCAGTGGCTCAGGTTAGTTTCATCT | + |
|
Preference number: 1 (lower is better) Translates to: LSVGRHLPRRLLACK*PGTCHPQWLRLVSS Trigger: AGATGAAACTAACCTGAGCCACTGAGGATGACAAGTCCCAGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CCA 90 bp | TGCCTCTGTTCTGTTCTGTTCCATATTCCACAGGGCCATGCCGCTTaGGTGCAGGATACAGCTAATGACCCTAGGTTTTATCCCAGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: CLCSVLFHIPQGHAA*VQDTANDPRFYPRP Trigger: TGGCCTGGGATAAAACCTAGGGTCATTAGCTGTATCCTGCACCCAAGCGGCATGGCCCTGTGGAATATGGAACAGAACAGAACAGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | CAGCGCCTAGAGCTTGATTTCTGCCTCTTATTTCTACTCCAGGTCTaGAGGCTTTTTGGTGCCCAAATTGGGTACTCCTCGTGGGCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: QRLELDFCLLFLLQV*RLFGAQIGYSSWAV Trigger: GACAGCCCACGAGGAGTACCCAATTTGGGCACCAAAAAGCCTCCAGACCTGGAGTAGAAATAAGAGGCAGAAATCAAGCTCTAGGCGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | CACAGTAGGTGTCTAATCCATGTTTACTCCCTGGAAGAACTGGTGTaGTTTCCTATTGGAGGAGGAGCCCGCCACCATCTCCAGGACACT | + |
|
Preference number: 1 (lower is better) Translates to: HSRCLIHVYSLEELV*FPIGGGARHHLQDT Trigger: AGTGTCCTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACATGGATTAGACACCTACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 90 bp | TCTAATCCATGTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTaGAGGAGGAGCCCGCCACCATCTCCAGGACACTCAGAAGTACAC | + |
|
Preference number: 1 (lower is better) Translates to: SNPCLLPGRTGVVSY*RRSPPPSPGHSEVH Trigger: GTGTACTTCTGAGTGTCCTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACATGGATTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 90 bp | GCGCAGTACTGTGACTCCATGCATAGCTGGTACTTGGCCTGGTGGTaGCCAAGTAAGATGAACAGGATTCGGTTTCCATCCTTTGCGTTT | + |
|
Preference number: 1 (lower is better) Translates to: AQYCDSMHSWYLAWW*PSKMNRIRFPSFAF Trigger: AAACGCAAAGGATGGAAACCGAATCCTGTTCATCTTACTTGGTCACCACCAGGCCAAGTACCAGCTATGCATGGAGTCACAGTACTGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | TGGGCTGTCCACAGAAAGAGTCTTGGGCTTATGGAGACATGGGTATaGGGCTGGTGTTCTCAGAGGAGAAAAGTTCTGTTCGTTGCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: WAVHRKSLGLMETWV*GWCSQRRKVLFVAS Trigger: AGAAGCAACGAACAGAACTTTTCTCCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCTGTGGACAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | CAGGACACTCAGAAGTACACAGAGTCTTCACTGTTGCTGTCCTGCTaGTCATCAAATTTGCGGATCTGGGCCTTGAGGTGCCTGAGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: QDTQKYTESSLLLSC*SSNLRIWALRCLSL Trigger: TAAACTCAGGCACCTCAAGGCCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTCTGTGTACTTCTGAGTGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 90 bp | TACCATAAAGAAGGTGGGGACAGATTGAGATGTGAATTTAACTGTTaGTGTGTGGTGATGAAGGGAGCTGGGGGAGTAGCCCAGCAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: YHKEGGDRLRCEFNC*CVVMKGAGGVAQQW Trigger: CCACTGCTGGGCTACTCCCCCAGCTCCCTTCATCACCACACATCAACAGTTAAATTCACATCTCAATCTGTCCCCACCTTCTTTATGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 90 bp | TTCCATTGTGTCCTCTACCAGGAAATGCTTTTCCATCTGCCCCCTTaGGGAACTTCTGTGCATCCCATTCTGATCAGATTGCTCCTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: FHCVLYQEMLFHLPP*GTSVHPILIRLLLP Trigger: TGGAAGGAGCAATCTGATCAGAATGGGATGCACAGAAGTTCCCCAAGGGGGCAGATGGAAAAGCATTTCCTGGTAGAGGACACAATGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | GTCCACAGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTaGTGTTCTCAGAGGAGAAAAGTTCTGTTCGTTGCTTCTCACCAT | + |
|
Preference number: 1 (lower is better) Translates to: VHRKSLGLMETWVWG*CSQRRKVLFVASHH Trigger: ATGGTGAGAAGCAACGAACAGAACTTTTCTCCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCTGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | CCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTaGCCAATAATAAAGGTATTCCCTTACTTGGTCAGCCTCTGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: PGYMVHGGHHGMMKT*PIIKVFPYLVSLCF Trigger: AAAGCAGAGGCTGACCAAGTAAGGGAATACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 90 bp | ACTCCATGCATAGCTGGTACTTGGCCTGGTGGTGACCAAGTAAGATaGACAGGATTCGGTTTCCATCCTTTGCGTTTCAAGTCTGTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: TPCIAGTWPGGDQVR*TGFGFHPLRFKSVP Trigger: TGGAACAGACTTGAAACGCAAAGGATGGAAACCGAATCCTGTTCATCTTACTTGGTCACCACCAGGCCAAGTACCAGCTATGCATGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 90 bp | GTTCAAGCCCTAGCTGATCTACTTTTACTACAAACTCCACACATGTaGTCCTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: VQALADLLLLQTPHM*SSLLEDIFLGDSWP Trigger: AGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAGGACCACATGTGTGGAGTTTGTAGTAAAAGTAGATCAGCTAGGGCTTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CCA 90 bp | CTGCAAGGTCTGATACTCAGCAGGATTCAACAAATGGTTCTTGTCTaGAATTACCATCCACCCAGCCCTTCACACCTGACAGGCATATTG | + |
|
Preference number: 1 (lower is better) Translates to: LQGLILSRIQQMVLV*NYHPPSPSHLTGIL Trigger: CAATATGCCTGTCAGGTGTGAAGGGCTGGGTGGATGGTAATTCCAGACAAGAACCATTTGTTGAATCCTGCTGAGTATCAGACCTTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 90 bp | GGAGGAATAAGAGGCCCTGGAAAAGGCTCTCTCAAAACAGCTTTGTaGTTGCTGGATCAAGCCACACCTGAAAGCCTGGTGTTTATTCAT | + |
|
Preference number: 1 (lower is better) Translates to: GGIRGPGKGSLKTAL*LLDQATPESLVFIH Trigger: ATGAATAAACACCAGGCTTTCAGGTGTGGCTTGATCCAGCAATCACAAAGCTGTTTTGAGAGAGCCTTTTCCAGGGCCTCTTATTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 90 bp | TCAAAACAGCTTTGTGATTGCTGGATCAAGCCACACCTGAAAGCCTaGTGTTTATTCATGTTCATGAGACCAACTTACCTTTTTACATTG | + |
|
Preference number: 1 (lower is better) Translates to: SKQLCDCWIKPHLKA*CLFMFMRPTYLFTL Trigger: CAATGTAAAAAGGTAAGTTGGTCTCATGAACATGAATAAACACCAGGCTTTCAGGTGTGGCTTGATCCAGCAATCACAAAGCTGTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTGCAGCTGCTGCGTGCTaGGCCCTACCCCGCGGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: PASLALALPGLTWSSPTSAAAAC*ALPRGR Trigger: CCGGCCGCGGGGTAGGGCTCAGCACGCAGCAGCTGC...ACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCGGACACTGCTAGTGCCCAGTGTGTGCCCGGTCCCCTGTGTGGCCTCACGCCGACCAGGTGGCGCTaGTGCGGCTCAGCTGGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PPDTASAQCVPGPLCGLTPTRWR*CGSAGV Trigger: CACTCCAGCTGAGCCGCAGCAGCGCCACCTGGTCGG...CGTGAGGCCACACAGGGGACCGGGCACACACTGGGCACTAGCAGTGTCCGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCGGACACTGCTAGTGCCCAGTGTGTGCCCGGTCCCCTGTGTGGCCTCACGTTCCCTCTGCAGCCGTaGAGCGAGGCCGCATCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: PPDTASAQCVPGPLCGLTFPLQP*SEAASR Trigger: GCGGGATGCGGCCTCGCTGCACGGCTGCAGAGGGAA...CGTGAGGCCACACAGGGGACCGGGCACACACTGGGCACTAGCAGTGTCCGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCGGACACTGCTAGTGCCCAGTGTGTGCCCGGTCCCCTGTGTGGCCTCACGGCGGCGGCGCTGTACTaGGCATCGACAACGTGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: PPDTASAQCVPGPLCGLTAAALY*ASTTCA Trigger: CGCACACGTTGTCGATGCCCAGTACAGCGCCGCCGC...CGTGAGGCCACACAGGGGACCGGGCACACACTGGGCACTAGCAGTGTCCGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCTCCGGTGGGCGGGGCTaGGGGAGATCCTGGCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRASGGRG*GRSWPG Trigger: TCCAGGCCAGGATCTCCCTCAGCCCCGCCCACCGGA...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTGAGACAGTGAGCTCTTCGTGCTaGACGCGGCGCAGGCGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: SLALALPGLTWSSPTSETVSSSC*TRRRRR Trigger: GCGCCGCCTGCGCCGCGTTCAGCACGAAGAGCTCAC...TGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCACCAGGTGGCGCTGCTaGGGCTCAGCTGGAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRATRWRC*GSAGVS Trigger: GCTCACTCCAGCTGAGCCGCAGCAGCGCCACCTGGT...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCCCTTCCAGGAGCAGGTaGACAAGCTGGGCCGCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRAPSRSR*TSWAAC Trigger: GCAGGCGGCCCAGCTTGTCCACCTGCTCCTGGAAGG...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 90 bp | GGGCCTGGCCAGTTCCGCCTGGCCGCCCTGATCCCCCATCACTGCTaGGCTGCTGGCTTTGTTCTGGCTTTGCCTGAGTTCTCTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GPGQFRLAALIPHHC*AAGFVLALPEFSLS Trigger: GGACAGAGAGAACTCAGGCAAAGCCAGAACAAAGCCAGCAGCCAAGCAGTGATGGGGGATCAGGGCGGCCAGGCGGAACTGGCCAGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGACAGACTGCACAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTGAGGCGGCGCTGCCGCTaGATACGGCACCGCTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GETDCTAGPQILTVKCNLRRRCR*IRHRCW Trigger: CCAGCAGCGGTGCCGTATGCAGCGGCAGCGCCGCCT...CAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCTCATTAGACGCCTCCTaGCTCCCTGCCCAGGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRASLDAS*LPAQAA Trigger: GGCAGCCTGGGCAGGGAGCCAGGAGGCGTCTAATGA...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTGAGACAGCGGCTCAGCTGGAGTaGGCTCTTCGTGCTGAACGC | + |
|
Preference number: 2 (lower is better) Translates to: SLALALPGLTWSSPTSETAAQLE*ALRAER Trigger: GCGTTCAGCACGAAGAGCTCACTCCAGCTGAGCCGC...TGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCGCCTATCCCTGCCCATaGGACCTGGGGAGACAGACT | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRAAYPCP*DLGRQT Trigger: AGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGC...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGTCCTGGATTGCGCCCCTGCAGGCAGGCCCCAAGCATTGCCCAGCCCTTAAGGATCAAGGTGTCCTaGATTGCGCCCCTGCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RCPGLRPCRQAPSIAQPLRIKVS*IAPLQA Trigger: TGCCTGCAGGGGCGCAATCCAGGACACCTTGATCCT...TAAGGGCTGGGCAATGCTTGGGGCCTGCCTGCAGGGGCGCAATCCAGGACACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCCCTGCCCATGAGACCTaGGGAGACAGACTGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRAPAHET*GDRLHS Trigger: GCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGG...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 90 bp | CATCTGAGGAGCTATGCAGAGTGGACAGGATCAAGGTGTCCTGGATaGCGCCCCTGCAGGCAGGCCCCAAGCATTGCCCAGCCCTTACCC | + |
|
Preference number: 2 (lower is better) Translates to: HLRSYAEWTGSRCPG*RPCRQAPSIAQPLP Trigger: GGGTAAGGGCTGGGCAATGCTTGGGGCCTGCCTGCAGGGGCGCAATCCAGGACACCTTGATCCTGTCCACTCTGCATAGCTCCTCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCGGGTGCCCTGCTTATTaGGTGTGCAGTCCATGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRAGCPAY*VCSPCC Trigger: GCAGCATGGACTGCACACTCAATAAGCAGGGCACCC...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGACAGACTGCACAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTGCTAGTGCCCAGTGTGTaGCCGGTCCCCTGTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GETDCTAGPQILTVKCNLLVPSV*PVPCVA Trigger: GGCCACACAGGGGACCGGGCACACACTGGGCACTAG...CAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTAACAATGGCAGCCCCTaGTCTTGGGGACCACTACCG | + |
|
Preference number: 2 (lower is better) Translates to: PASLALALPGLTWSSPTSNNGSP*SWGPLP Trigger: CGGTAGTGGTCCCCAAGAGCAGGGGCTGCCATTGTT...ACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGAGCAGGTGGACAAGCTaGGCCGCCTGCAGGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TQLPIPAHETWGDRLHSWSRWTS*AACRWM Trigger: CATCCACCTGCAGGCGGCCCAGCTTGTCCACCTGCT...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTGAGACACTGCTGCGGCTCAGCTaGAGTGAGCTCTTCGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLALALPGLTWSSPTSETLLRLS*SELFVL Trigger: CAGCACGAAGAGCTCACTCCAGCTGAGCCGCAGCAG...TGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCACAACGTGTGCGAGTTaGCGGCACGCCTGCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRATTCAS*RHACCS Trigger: TGAACAGCAGGCGTGCCGCCAACTCGCACACGTTGT...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCGATATAGGAACAGGCTaGGAGGAGAGGCCAGCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRADIGTG*EERPAP Trigger: AGGCGCTGGCCTCTCCTCCCAGCCTGTTCCTATATC...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 90 bp | CTCCCATCACAGGTCAGGGATCCCCCACTGGTATTTCCCAGGGGTTaGCAGGCACATCAGTGGGAACCCTGGCCTGTGTCTCCAGGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPSQVRDPPLVFPRG*QAHQWEPWPVSPGP Trigger: TGGACCTGGAGACACAGGCCAGGGTTCCCACTGATGTGCCTGCAAACCCCTGGGAAATACCAGTGGGGGATCCCTGACCTGTGATGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCGCCATGCCGCTTGGGTaGAGGATACAGCTAATGACC | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRAAMPLG*RIQLMT Trigger: GGTCATTAGCTGTATCCTGCACCCAAGCGGCATGGC...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGAGAGACCCTGAGATGTaGGCTGAGGAGAGACCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: TQLPIPAHETWGDRLHSWRDPEM*AEERPA Trigger: CGCTGGTCTCTCCTCAGCTCACATCTCAGGGTCTCT...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 90 bp | GGATCCAGCCAGTTTATAGCCAAAGGCTGCCAAGGGGAGACTCAGTaGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: GSSQFIAKGCQGETQ*PIPAHETWGDRLHS Trigger: GCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGTCTCCCCTTGGCAGCCTTTGGCTATAAACTGGCTGGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCATCTGAGGAGCTATGCAGAGTGGACAGGATCAAGGTGTCCTGGATTGCGCCAAGGTGTCCTGGATTaGGCCCCTGCAGGCAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: FHLRSYAEWTGSRCPGLRQGVLD*APAGRP Trigger: GGGCCTGCCTGCAGGGGCGCAATCCAGGACACCTTG...GCGCAATCCAGGACACCTTGATCCTGTCCACTCTGCATAGCTCCTCAGATGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTCAGTGCGGTGTCCCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGGATGTCACTCCATCATaGCCTCAAACTAATCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PQCGVPASLALALPGLTWDVTPS*PQTNPD Trigger: GTCTGGATTAGTTTGAGGGCATGATGGAGTGACATC...CCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGGGACACCGCACTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCCTTCCAGATGTAGCCTaGTACTTCCCTCACCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRALPDVA*YFPHLL Trigger: AAGGAGGTGAGGGAAGTACCAGGCTACATCTGGAAG...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGACAAGCTGGGCCGCCTaGAGGTGGATGCTGCGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RKSLGLMETWVWGWCSQRTSWAA*RWMLRS Trigger: ACTCCGCAGCATCCACCTGCAGGCGGCCCAGCTTGT...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTCAGCTCATTAAAGCATaGTCATTAGACGCCTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PASLALALPGLTWSSPTSQLIKA*SLDASW Trigger: CCAGGAGGCGTCTAATGAGCATGCTTTAATGAGCTG...ACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCCTGGGACTTGTAGGATCAAGGTGTCCTaGATTGCGCCCCTGCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VGRHLPRRLLACKWPGTCRIKVS*IAPLQA Trigger: TGCCTGCAGGGGCGCAATCCAGGACACCTTGATCCT...ACAAGTCCCAGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGGGGCCGTGGCCTTCATaGACCAGGTGCGTGCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ALLIECAVHAALKLTPFMGPWPS*TRCVPS Trigger: GGAAGGCACGCACCTGGTCCATGAAGGCCACGGCCC...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGTGTGGCCTCACGGGGTaGGGGTGGTCTTCCCACGCT | + |
|
Preference number: 2 (lower is better) Translates to: ALLIECAVHAALKLTPFMCGLTG*GWSSHA Trigger: AGCGTGGGAAGACCACCCCCACCCCGTGAGGCCACA...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACACAGTGGAGACGTCAAAGCCTTCCCTGAGCAGAGCCCACCCGCTTAGGGCCCCACAGAAAGAGTCTTaGGCTTATGGAGACATGGGT | + |
|
Preference number: 2 (lower is better) Translates to: HTVETSKPSLSRAHPLRAPQKES*AYGDMG Trigger: ACCCATGTCTCCATAAGCCCAAGACTCTTTCTGTGG...GGCCCTAAGCGGGTGGGCTCTGCTCAGGGAAGGCTTTGACGTCTCCACTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGTCGCTCTTCCTGGGCTaGCCTGGAGTTCACCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: RKSLGLMETWVWGWCSQRSLFLG*PGVHPP Trigger: TGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGA...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGCAGTCTGGCTCCAGCTaGCAGGCGGTTCCCAGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: ALLIECAVHAALKLTPFMQSGSS*QAVPRF Trigger: GAACCTGGGAACCGCCTGTCAGCTGGAGCCAGACTG...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGAGACCTCTGAGCTCCTaGCTCTGTTCTGTTCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TQLPIPAHETWGDRLHSWRPLSS*LCSVLF Trigger: GAACAGAACAGAACAGAGGCAGGAGCTCAGAGGTCT...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGGAGACAGACTGCACAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTGCCAAGCAGACTTCACTaGCACACACCAGACTCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: GETDCTAGPQILTVKCNLPSRLH*HTPDSQ Trigger: TTGGGAGTCTGGTGTGTGGCAGTGAAGTCTGCTTGG...CAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTGAGACAATACGGCTAGTCTGGTaGACACAGACTTACATACGC | + |
|
Preference number: 2 (lower is better) Translates to: SLALALPGLTWSSPTSETIRLVW*TQTYIR Trigger: GCGTATGTAAGTCTGTGTCCACCAGACTAGCCGTAT...TGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGACAGGATCAAGGTGTCCTGGATTGCGCCCCTGCAGGCAGGCCCCAAGCATTTCCATGTTTACTCCCTaGAAGAACTGGTGTGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: WTGSRCPGLRPCRQAPSISMFTP*KNWCGF Trigger: GAAACCACACCAGTTCTTCCAGGGAGTAAACATGGA...AATGCTTGGGGCCTGCCTGCAGGGGCGCAATCCAGGACACCTTGATCCTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAGACAGACTGCACAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTGGCTCCAGAGCTGGAATaGCAGGTATGTACCACCATA | + |
|
Preference number: 2 (lower is better) Translates to: GETDCTAGPQILTVKCNLAPELE*QVCTTI Trigger: TATGGTGGTACATACCTGCCATTCCAGCTCTGGAGC...CAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGCCCAGCAGTGGTGGCACATGCCCTTGGTTCCAACTCATGGGAGGCAGAGCTGTTGCTGTCCTGCTaGTCATCAAATTTGCGGATC | + |
|
Preference number: 2 (lower is better) Translates to: SSPAVVAHALGSNSWEAELLLSC*SSNLRI Trigger: GATCCGCAAATTTGATGACCAGCAGGACAGCAACAG...CTCTGCCTCCCATGAGTTGGAACCAAGGGCATGTGCCACCACTGCTGGGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CAA 90 bp | CGCCACCATCTCCAGGACACTCAGAAGTACACAGAGTCTTCACTGTaGCTGTCCTGCTGGTCATCAAATTTGCGGATCTGGGCCTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RHHLQDTQKYTESSL*LSCWSSNLRIWALR Trigger: CCTCAAGGCCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTCTGTGTACTTCTGAGTGTCCTGGAGATGGTGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGATTCTCCAGCCAGACTaGGAGGACACTGACTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: RKSLGLMETWVWGWCSQRILQPD*EDTDSG Trigger: GCCTGAGTCAGTGTCCTCTCAGTCTGGCTGGAGAAT...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGAGCCTGTGTTCTTGGTaGCTCAGTTTACTTTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TQLPIPAHETWGDRLHSWSLCSW*LSLLSL Trigger: GAGTGAAAGTAAACTGAGGCACCAAGAACACAGGCT...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGGCTCCCTGCCCAGGCTaGCTTCCCCATGCTAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: ALLIECAVHAALKLTPFMAPCPG*LPHAKM Trigger: CATTTTAGCATGGGGAAGGCAGCCTGGGCAGGGAGC...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGGCCTGCTGCAAGGTCTaGTACTCAGCAGGATTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: RKSLGLMETWVWGWCSQRACCKV*YSAGFN Trigger: GTTGAATCCTGCTGAGTATCAGACCTTGCAGCAGGC...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGCCACTACCGGTGCCATaGTGCATTAGCGATGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ALLIECAVHAALKLTPFMPLPVP*CISDVV Trigger: GACCACATCGCTAATGCAGCATGGCACCGGTAGTGG...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATCCAGGGTCTAGTCTGTaGTCTGTAGGTCCCAGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: WIHGPRRAPWDDENLANNPGSSL*SVGPSR Trigger: CCTACTGGGACCTACAGAGCACAGACTAGACCCTGG...ATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTATGGGCCGCCTGCAGGTaGATGCTGCGGAGTACGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVWAACR*MLRSTA Trigger: AGCCGTACTCCGCAGCATCCACCTGCAGGCGGCCCA...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCCTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCCTTCCATGTTTACTCCCTaGAAGAACTGGTGTGGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VLSVGRHLPRRLLACKWPSMFTP*KNWCGF Trigger: GAAACCACACCAGTTCTTCCAGGGAGTAAACATGGA...AGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGCAGGATTTGGAGGTGTaGAACATTCTGGGCACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ALLIECAVHAALKLTPFMQDLEV*NILGTG Trigger: GCCTGTGCCCAGAATGTTCCACACCTCCAAATCCTG...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGTCCAGCAGTCTAGACTaGGTGGAAGAAGAGAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RKSLGLMETWVWGWCSQRSSSLD*VEEERR Trigger: TCTCCTCTCTTCTTCCACCCAGTCTAGACTGCTGGA...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 90 bp | TCAAACTTAGTTTGTGCTGAGGTTGGCCTTGAGCTTCTGACCTTCTaGCCTCCATGCTCCAGAGCTGGAATGGCAGGTATGTACCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: SNLVCAEVGLELLTF*PPCSRAGMAGMYHH Trigger: ATGGTGGTACATACCTGCCATTCCAGCTCTGGAGCATGGAGGCAAGAAGGTCAGAAGCTCAAGGCCAACCTCAGCACAAACTAAGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTATTCCCTTACTTGGTCGCAGGCCCCAAGCATTaGCCAGCCCTTACCCCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: HHGMMKTWPIIKVFPYLVAGPKH*PALTPS Trigger: ACTAGGGGTAAGGGCTGGGCAATGCTTGGGGCCTGC...GACCAAGTAAGGGAATACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCTTCTGACTATGCCCCCTGGAATCTACACAGCCATTGCCCCCATATGAGACAGAGTCTTCACTGTTaGTGTCCTGCTGGTCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: MPSDYAPWNLHSHCPHMRQSLHC*CPAGHQ Trigger: TTGATGACCAGCAGGACAGCAACAGTGAAGACTCTG...TCTCATATGGGGGCAATGGCTGTGTAGATTCCAGGGGGCATAGTCAGAAGGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CAA 90 bp | AGCTTGATTTCTGCCTCTTATTTCTACTCCAGGTCTGGAGGCTTTTaGGTGCCCAAATTGGGTACTCCTCGTGGGCTGTCCACAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLISASYFYSRSGGF*VPKLGTPRGLSTER Trigger: TCTTTCTGTGGACAGCCCACGAGGAGTACCCAATTTGGGCACCAAAAAGCCTCCAGACCTGGAGTAGAAATAAGAGGCAGAAATCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATCAGGTTAGTTTCATCTaGGGAGCTATGCAGAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: WIHGPRRAPWDDENLANNQVSFI*GAMQSG Trigger: TCCACTCTGCATAGCTCCTCAGATGAAACTAACCTG...ATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTAGCGATGTGGTCCCCCTaGGGAGAATTGCAAGTAGCG | + |
|
Preference number: 2 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVAMWSP*GELQVA Trigger: CGCTACTTGCAATTCTCCCCAGGGGGACCACATCGC...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCATGGGATGATGAAAACCTGGCCAATAATAAAGGTATTCCCTTACTTGGTCGGTGGCACATGCCCTTaGTTCCAACTCATGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HHGMMKTWPIIKVFPYLVGGTCP*FQLMGG Trigger: GCCTCCCATGAGTTGGAACCAAGGGCATGTGCCACC...GACCAAGTAAGGGAATACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGCTAAACTTGTCTGTCTaGTGGAAAGTCCTGATAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RKSLGLMETWVWGWCSQRLNLSV*WKVLIG Trigger: ACCTATCAGGACTTTCCATCAGACAGACAAGTTTAG...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATATGTGAATTTAACTGTTaGTGTGTGGTGATGAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: PGYMVHGGHHGMMKTWPICEFNC*CVVMKG Trigger: TCCCTTCATCACCACACATCAACAGTTAAATTCACA...TATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTACTGCCTCAGGGCCTTTaGATAGCCGTTCCTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVLPQGL*IAVPSS Trigger: GGAAGAAGGAACGGCTATGCAAAGGCCCTGAGGCAG...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTAACTAATCCAGACCTCTaGGCTCCTGCCTCTGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVTNPDL*APASVL Trigger: CAGAACAGAGGCAGGAGCTCAGAGGTCTGGATTAGT...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTAGTGGTCATCTGCCTTTaGCACAGGAAGAACCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVVVICL*HRKNQA Trigger: TGCCTGGTTCTTCCTGTGTCAAAGGCAGATGACCAC...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCCCATATGAGACCTCAGACAGGTCTATGAACCTCATTTCCCCTTCTGTAAAAACTCCCTGGAAGAACTaGTGTGGTTTCCTATTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PPYETSDRSMNLISPSVKTPWKN*CGFLLE Trigger: CTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGT...TTTTACAGAAGGGGAAATGAGGTTCATAGACCTGTCTGAGGTCTCATATGGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CAA 90 bp | CATGGGATGATGAAAACCTGGCCAATAATAAAGGTATTCCCTTACTaGGTCAGCCTCTGCTTTCTTCTGCAGTATTGGGAAAGTAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: HGMMKTWPIIKVFPY*VSLCFLLQYWESNP Trigger: GGGGTTACTTTCCCAATACTGCAGAAGAAAGCAGAGGCTGACCAAGTAAGGGAATACCTTTATTATTGGCCAGGTTTTCATCATCCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTAGTGTGCAGTCCATGCTaGTCTGAAACTGACACCATT | + |
|
Preference number: 2 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVVCSPC*SETDTI Trigger: AATGGTGTCAGTTTCAGAGCAGCATGGACTGCACAC...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | CGGCGCAGGCGGCGCTGCCGCTGCATACGGCACCGCTaGTGGCCGCCGCGGGGTTGCATGCCGCGCCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RRRRRCRCIRHR*WPPRGCMPRPW Trigger: CCATGGGCGCGGCATGCAACCCCGCGGCGGCCAGCAGCGGTGCCGTATGCAGCGGCAGCGCCGCCTGCGCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CGCAGGCGGCGCTGCCGCTGCATACGGCACCGCTGCTaGCCGCCGCGGGGTTGCATGCCGCGCCCATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRRRCRCIRHRC*PPRGCMPRPWQ Trigger: CTGCCATGGGCGCGGCATGCAACCCCGCGGCGGCCAGCAGCGGTGCCGTATGCAGCGGCAGCGCCGCCTGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | TCCCTCTGCAGCCGTGCAGCGAGGCCGCATCCCGCATaGGCTCCCCGGTCCAGCGGCCTGCAGTCCCCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: SLCSRAARPHPA*APRSSGLQSPG Trigger: CCCGGGGGACTGCAGGCCGCTGGACCGGGGAGCGCATGCGGGATGCGGCCTCGCTGCACGGCTGCAGAGGGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CCGCGGCCGGACGCTTTGGTGGCGGCGGCGCTGTACTaGGCATCGACAACGTGTGCGAGTTGGCGGCACGCC | + |
|
Preference number: 3 (lower is better) Translates to: PRPDALVAAALY*ASTTCASWRHA Trigger: GGCGTGCCGCCAACTCGCACACGTTGTCGATGCCCAGTACAGCGCCGCCGCCACCAAAGCGTCCGGCCGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | GCCAGTGTCCGAGCTGATTGCGCAGCTGCTGCGTGCTaGGCCCTACCCCGCGGCCGGACGCTTTGGTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: ASVRADCAAAAC*ALPRGRTLWWR Trigger: CCGCCACCAAAGCGTCCGGCCGCGGGGTAGGGCTCAGCACGCAGCAGCTGCGCAATCAGCTCGGACACTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GGGGTGGGGGTGGTCTTCCCACGCTGCCACCTGACGTaGCCTGTTTCCCTCTGCAGCCGTGCAGCGAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: GVGVVFPRCHLT*PVSLCSRAARP Trigger: CGGCCTCGCTGCACGGCTGCAGAGGGAAACAGGGCACGTCAGGTGGCAGCGTGGGAAGACCACCCCCACCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTGAGACACTGGCCGCCGCGGGGTaGCATGCCGCGCCCATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLALALPGLTWSSPTSETLAAAG*HAAPMA Trigger: TGCCATGGGCGCGGCATGCAACCCCGCGGCGGCCAG...TGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGTGCGGTGTCCCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGTGGCAGCCCCTGCTCTaGGGGACCACTACCGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PQCGVPASLALALPGLTWWQPLL*GTTTGA Trigger: GGCACCGGTAGTGGTCCCCAAGAGCAGGGGCTGCCA...CCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGGGACACCGCACTGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GGTGGCGGCGGCGCTGTACTGGGCATCGACAACGTGTaGGAGTTGGCGGCACGCCTGCTGTTCAGCACGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GGGGAVLGIDNV*ELAARLLFSTV Trigger: GACCGTGCTGAACAGCAGGCGTGCCGCCAACTCGCACACGTTGTCGATGCCCAGTACAGCGCCGCCGCCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | TTCCCACGCTGCCACCTGACGTGCCCTGTTTCCCTCTaGAGCCGTGCAGCGAGGCCGCATCCCGCATGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: FPRCHLTCPVSL*SRAARPHPACA Trigger: AGCGCATGCGGGATGCGGCCTCGCTGCACGGCTGCAGAGGGAAACAGGGCACGTCAGGTGGCAGCGTGGGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GTGTGGCCTCACGGGGTGGGGGTGGTCTTCCCACGCTaGCACCTGACGTGCCCTGTTTCCCTCTGCAGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: VWPHGVGVVFPR*HLTCPVSLCSR Trigger: ACGGCTGCAGAGGGAAACAGGGCACGTCAGGTGGCAGCGTGGGAAGACCACCCCCACCCCGTGAGGCCACAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GCAGGTGGACAAGCTGGGCCGCCTGCAGGTGGATGCTaGGGAGTACGGCTGCCTCAAGGCCATCGCGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGGQAGPPAGGC*GVRLPQGHRAL Trigger: AAGAGCGCGATGGCCTTGAGGCAGCCGTACTCCGCAGCATCCACCTGCAGGCGGCCCAGCTTGTCCACCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | GCGGCGCTGTACTGGGCATCGACAACGTGTGCGAGTTaGCGGCACGCCTGCTGTTCAGCACGGTCGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: AALYWASTTCAS*RHACCSARSSG Trigger: CCCACTCGACCGTGCTGAACAGCAGGCGTGCCGCCAACTCGCACACGTTGTCGATGCCCAGTACAGCGCCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCGGACACTGCTAGTGCCCAGTGTGTGCCCGGTCCCCTGTGTGGCCTCACGCTGACCACGCCCCCATaGTCATTGCCCCAACTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PPDTASAQCVPGPLCGLTLTTPP*SLPQLS Trigger: GCTGAGTTGGGGCAATGACAATGGGGGCGTGGTCAG...CGTGAGGCCACACAGGGGACCGGGCACACACTGGGCACTAGCAGTGTCCGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CCACGTTGCAAGAGGAGGTGCAGCTGGTGGGGATGCTaGGGGTGGCCTCCGGACACTGCTAGTGCCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRCKRRCSWWGC*GWPPDTASAQC Trigger: ACACTGGGCACTAGCAGTGTCCGGAGGCCACCCCCAGCATCCCCACCAGCTGCACCTCCTCTTGCAACGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GGCCAGTTCCGCCTGGCCGCCCTGATCCCCCATCACTaGTTGGCTGCTGGCTTTGTTCTGGCTTTGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GQFRLAALIPHH*LAAGFVLALPE Trigger: CTCAGGCAAAGCCAGAACAAAGCCAGCAGCCAAGCAGTGATGGGGGATCAGGGCGGCCAGGCGGAACTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCGGACACTGCTAGTGCCCAGTGTGTGCCCGGTCCCCTGTGTGGCCTCACGTATCTGGGCACTGCTTaGAAGAGAGGCCTTCCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PPDTASAQCVPGPLCGLTYLGTA*KRGLPV Trigger: CACCGGAAGGCCTCTCTTCAAAGCAGTGCCCAGATA...CGTGAGGCCACACAGGGGACCGGGCACACACTGGGCACTAGCAGTGTCCGGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGTGCGGTGTCCCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGTCAGGCCACACCTTTTaGACACAGGTGACTCCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQCGVPASLALALPGLTWSGHTF*TQVTPL Trigger: CAGCGGAGTCACCTGTGTCAAAAAGGTGTGGCCTGA...CCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGGGACACCGCACTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GCTATGCAGAGTGGACAGGATCAAGGTGTCCTGGATTaGGCCCCTGCAGGCAGGCCCCAAGCATTGCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AMQSGQDQGVLD*APAGRPQALPS Trigger: GCTGGGCAATGCTTGGGGCCTGCCTGCAGGGGCGCAATCCAGGACACCTTGATCCTGTCCACTCTGCATAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR GCA 72 bp | TCTATGTTTGGCCTGGGTGCCTCAGTGCGGTGTCCCTaGATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SMFGLGASVRCP*IPGSRSSWADL Trigger: CAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGGGACACCGCACTGAGGCACCCAGGCCAAACATAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | TCTGGGCACAGGCCCTGCAGTAGGACCAGGGCTGGATaGGGGAGCAATAGTGAGGGTTCCCATCCTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGHRPCSRTRAG*GSNSEGSHPVS Trigger: GCTGACAGGATGGGAACCCTCACTATTGCTCCCTCATCCAGCCCTGGTCCTACTGCAGGGCCTGTGCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTaGAGTTCACCCACCAGTGAGACAGGTGTCAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PASLALALPGLT*SSPTSETGVSS Trigger: TGAGCTGACACCTGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | GGGGAGACTCAGTTGCCTATCCCTGCCCATGAGACCTaGGGAGACAGACTGCACAGCTGGGCCTCAGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GETQLPIPAHET*GDRLHSWASDP Trigger: AGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGTCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | GTGATGAAGGGAGCTGGGGGAGTAGCCCAGCAGTGGTaGCACATGCCCTTGGTTCCAACTCATGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VMKGAGGVAQQW*HMPLVPTHGRQ Trigger: CTGCCTCCCATGAGTTGGAACCAAGGGCATGTGCCACCACTGCTGGGCTACTCCCCCAGCTCCCTTCATCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | TACCAGGGAGTTAGGGGCCCAACTGTGGAGTGGGACTaGGTGAGATCCATGCCTATTGAGCCCGAGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: YQGVRGPTVEWD*VRSMPIEPEAC Trigger: GCAGGCCTCGGGCTCAATAGGCATGGATCTCACTCAGTCCCACTCCACAGTTGGGCCCCTAACTCCCTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | AGACTCCCAACTGGACCAAAGGCCACTCCCTCAGACTaGCCACGCCCCCATTGTCATTGCCCCAACTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RLPTGPKATPSD*PRPHCHCPNSA Trigger: GGCTGAGTTGGGGCAATGACAATGGGGGCGTGGTCAGTCTGAGGGAGTGGCCTTTGGTCCAGTTGGGAGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | TTCCCAGGTTCTCTATGTTTGGCCTGGGTGCCTCAGTaGGGTGTCCCTGCATCCCTGGCTCTCGCTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPGSLCLAWVPQ*GVPASLALALP Trigger: AGGAAGAGCGAGAGCCAGGGATGCAGGGACACCGCACTGAGGCACCCAGGCCAAACATAGAGAACCTGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | AGGTCAGGGATCCCCCACTGGTATTTCCCAGGGGTTTaGAGGCACATCAGTGGGAACCCTGGCCTGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSGIPHWYFPGV*RHISGNPGLCL Trigger: GAGACACAGGCCAGGGTTCCCACTGATGTGCCTGCAAACCCCTGGGAAATACCAGTGGGGGATCCCTGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CCCTGCCCAGGCTGCCTTCCCCATGCTAAAATGCCCTaGGGAGCCAGCCTGTGTTCTTGGTGCCTCAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PCPGCLPHAKMP*GASLCSWCLSL Trigger: TAAACTGAGGCACCAAGAACACAGGCTGGCTCCCCAGGGCATTTTAGCATGGGGAAGGCAGCCTGGGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CAGCTGGGCCTCAGATCCTTACAGTCAAGTGCAACCTaGAGGCAGCCACTCAGAGCCCTATGGATCGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QLGLRSLQSSAT*RQPLRALWIGC Trigger: GCACCCGATCCATAGGGCTCTGAGTGGCTGCCTCCAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CCAGCAGTGGTGGCACATGCCCTTGGTTCCAACTCATaGGAGGCAGAGGCAGACCAATCTCGGTTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PAVVAHALGSNS*EAEADQSRFKA Trigger: GGCCTTGAACCGAGATTGGTCTGCCTCTGCCTCCCATGAGTTGGAACCAAGGGCATGTGCCACCACTGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTTCCAACTCATGGGAGGCAGAGGCAGACCAATCTCGGTTCAAGGCCAGCTGGTGTGGTTTCCTATaGGAGGAGGAGCCCGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LGSNSWEAEADQSRFKASWCGFL*EEEPAT Trigger: GGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCA...GCTGGCCTTGAACCGAGATTGGTCTGCCTCTGCCTCCCATGAGTTGGAACCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGCCTGCCTCAGGGCCTTaGCATAGCCGTTCCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TQLPIPAHETWGDRLHSWPASGP*HSRSFF Trigger: GAAGAAGGAACGGCTATGCAAAGGCCCTGAGGCAGG...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCCTTGGTGTGGTTTCCTATaGGAGGAGGAGCCCGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: VLSVGRHLPRRLLACKWPWCGFL*EEEPAT Trigger: GGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCA...AGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | GGTCTTGGGCCATTTGAAGCCCAGTCTGGCTCCAGCTaGCAGGCGGTTCCCAGGTTCTCTATGTTTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLGPFEAQSGSS*QAVPRFSMFGL Trigger: CAGGCCAAACATAGAGAACCTGGGAACCGCCTGTCAGCTGGAGCCAGACTGGGCTTCAAATGGCCCAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | TGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTaGACAGCTGGGCCTCAGATCCTTACAGTCAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CLSLPMRPGETD*TAGPQILTVKC Trigger: GCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | CCTGGAGCCCACAGAACCTCTCAGCTCAATGGCTGCTaGATGGGGCAGCAGCCAGAGGGTGATATAGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PGAHRTSQLNGC*MGQQPEGDIGT Trigger: TGTTCCTATATCACCCTCTGGCTGCTGCCCCATGCAGCAGCCATTGAGCTGAGAGGTTCTGTGGGCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTaGGCCTCAGATCCTTACAGTCAAGTGCAACCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PAHETWGDRLHS*ASDPYSQVQPG Trigger: TCCAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | TCTCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTaGAGCCAGCATGCTGATGCCTCTGGTGTCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SPRPCPGRPSTV*SQHADASGVMG Trigger: ACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTCTGCCAGGACAAGGCCTGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCATCCCTGGCTCTCGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTTTACAAATCCAGACCTaGTCTAGTCCCCTCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PASLALALPGLTWSSPTSLQIQT*SSPLLR Trigger: TCTCAGGAGGGGACTAGACAAGGTCTGGATTTGTAA...ACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCGAGAGCCAGGGATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GACTGCACAGCTGGGCCTCAGATCCTTACAGTCAAGTaGAACCTGGAGGCAGCCACTCAGAGCCCTATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: DCTAGPQILTVK*NLEAATQSPMD Trigger: ATCCATAGGGCTCTGAGTGGCTGCCTCCAGGTTGCACTTGACTGTAAGGATCTGAGGCCCAGCTGTGCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | AGCGGGAGAGGCCAGAGACAGAAGCTGAGTTCTCAGTaGTTGACAGATGTGGCCTCCACGTTGCAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGRGQRQKLSSQ*LTDVASTLQEE Trigger: CTCCTCTTGCAACGTGGAGGCCACATCTGTCAATCACTGAGAACTCAGCTTCTGTCTCTGGCCTCTCCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | TCCTGGCAGACCTTCAACAGTCTGGAGCCAGCATGCTaGTGCCTCTGGTGTCATGGGTATCTGGAAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SWQTFNSLEPAC*CLWCHGYLERP Trigger: TGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGCTCCAGACTGTTGAAGGTCTGCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR GCA 72 bp | TCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTaGAAGTGGCCTGGGACTTGTCATCCTCAGTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SVGRHLPRRLLA*KWPGTCHPQWL Trigger: GAGCCACTGAGGATGACAAGTCCCAGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR GCA 72 bp | CAGGCCACACCTCAGGGGCCATTCTCTCTGATGACATaGCTTTGCTGCGGTAGGGGAAGACAGTACAACATC | + |
|
Preference number: 3 (lower is better) Translates to: QATPQGPFSLMT*LCCGRGRQYNI Trigger: GATGTTGTACTGTCTTCCCCTACCGCAGCAAAGGCATGTCATCAGAGAGAATGGCCCCTGAGGTGTGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | TCCAGGCCATGTACCAAGCTGCCTGAGACCATACTCTaGATCCTACGCCTGATGTCACTCCATCATGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRPCTKLPETIL*ILRLMSLHHAL Trigger: GAGGGCATGATGGAGTGACATCAGGCGTAGGATGCAGAGTATGGTCTCAGGCAGCTTGGTACATGGCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | CTGAAGGCAGGATCCAGCCAGTTTATAGCCAAAGGCTaGCAAGGGGAGACTCAGTTGCCTATCCCTGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LKAGSSQFIAKG*QGETQLPIPAH Trigger: ATGGGCAGGGATAGGCAACTGAGTCTCCCCTTGGCAGCCTTTGGCTATAAACTGGCTGGATCCTGCCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | ACCATAGGCAAAGCTAACAATGGCAGCCCCTGCTCTTaGGGACCACTACCGGTGCCATGCTGCATTAGCGAT | + |
|
Preference number: 3 (lower is better) Translates to: TIGKANNGSPCS*GPLPVPCCISD Trigger: ATCGCTAATGCAGCATGGCACCGGTAGTGGTCCCCAAGAGCAGGGGCTGCCATTGTTAGCTTTGCCTATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | TGGGTACTCCTCGTGGGCTGTCCACAGAAAGAGTCTTaGGCTTATGGAGACATGGGTATGGGGCTGGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: WVLLVGCPQKES*AYGDMGMGLVF Trigger: GAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCTGTGGACAGCCCACGAGGAGTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | ACTCAGACACTGCTCCAGGCCATGTACCAAGCTGCCTaGGACCATACTCTGCATCCTACGCCTGATGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: TQTLLQAMYQAA*DHTLHPTPDVT Trigger: AGTGACATCAGGCGTAGGATGCAGAGTATGGTCTCAGGCAGCTTGGTACATGGCCTGGAGCAGTGTCTGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CTGGCCTGCAAGTGGCCTGGGACTTGTCATCCTCAGTaGCTCAGGTTAGTTTCATCTGAGGAGCTATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LACKWPGTCHPQ*LRLVSSEELCR Trigger: TCTGCATAGCTCCTCAGATGAAACTAACCTGAGCCACTGAGGATGACAAGTCCCAGGCCACTTGCAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | TGTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTaGAGGAGGAGCCCGCCACCATCTCCAGGACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLLPGRTGVVSY*RRSPPPSPGHS Trigger: TGAGTGTCCTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGCATGCTGATGCCTCTGGTGTCATGGGTATCTGGAAAGGCCACTGCAGCTATGTGGTCCTCTCTGTaGGAAGACATCTTCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASMLMPLVSWVSGKATAAMWSSL*EDIFLG Trigger: TCCTAGGAAGATGTCTTCCAACAGAGAGGACCACAT...AGCTGCAGTGGCCTTTCCAGATACCCATGACACCAGAGGCATCAGCATGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGACCGTGACTGTCAGATaGATCAGCACCACCGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RKSLGLMETWVWGWCSQRTVTVR*ISTTGT Trigger: GGTTCCGGTGGTGCTGATCAATCTGACAGTCACGGT...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | ATGCCCCCTGGAATCTACACAGCCATTGCCCCCATATaGGACCTCAGACAGGTCTATGAACCTCATTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: MPPGIYTAIAPI*DLRQVYEPHFP Trigger: GGGGAAATGAGGTTCATAGACCTGTCTGAGGTCTCATATGGGGGCAATGGCTGTGTAGATTCCAGGGGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | CGCTCTTCCTGGGCTGACCTGGAGTTCACCCACCAGTaGGACAGGTGTCAGCTCATTAAAGCATGCTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: RSSWADLEFTHQ*DRCQLIKACSL Trigger: TAATGAGCATGCTTTAATGAGCTGACACCTGTCTCACTGGTGGGTGAACTCCAGGTCAGCCCAGGAAGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | CCTCAGGGGCCATTCTCTCTGATGACATGCCTTTGCTaGGGTAGGGGAAGACAGTACAACATCTTAGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: PQGPFSLMTCLC*GRGRQYNILET Trigger: GGTCTCTAAGATGTTGTACTGTCTTCCCCTACCGCAGCAAAGGCATGTCATCAGAGAGAATGGCCCCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | GCAGTCCATGCTGCTCTGAAACTGACACCATTCATGTaGCCATCTCCTGAGCCTGCTGCAAGGTCTGATACT | + |
|
Preference number: 3 (lower is better) Translates to: AVHAALKLTPFM*PSPEPAARSDT Trigger: AGTATCAGACCTTGCAGCAGGCTCAGGAGATGGGCACATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CTGCCTCTTATTTCTACTCCAGGTCTGGAGGCTTTTTaGTGCCCAAATTGGGTACTCCTCGTGGGCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPLISTPGLEAF*CPNWVLLVGCP Trigger: TGGACAGCCCACGAGGAGTACCCAATTTGGGCACCAAAAAGCCTCCAGACCTGGAGTAGAAATAAGAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGATGGAGCAGCAGTTCTaGAGCCTGTCCCTGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLIECAVHAALKLTPFMMEQQF*SLSLQL Trigger: CAACTGCAGGGACAGGCTCAAGAACTGCTGCTCCAT...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTAGACAACGTGTGCGAGTaGGCGGCACGCCTGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVDNVCE*AARLLF Trigger: GAACAGCAGGCGTGCCGCCAACTCGCACACGTTGTC...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCTGCTTATTGAGTGTGCAGTCCATGCTGCTCTGAAACTGACACCATTCATGGGGAAGGAGCAGGATTaGGAGGTGTGGAACATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLIECAVHAALKLTPFMGKEQD*EVWNIL Trigger: CAGAATGTTCCACACCTCCAAATCCTGCTCCTTCCC...CATGAATGGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | CTGGGAGGTACATCATGTAACAGGCTTCTGAGAACCTaGCAGTCAGGCATAGTGGTGCATGCAGGCTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGGTSCNRLLRT*QSGIVVHAGLS Trigger: TGACAAGCCTGCATGCACCACTATGCCTGACTGTCAGGTTCTCAGAAGCCTGTTACATGATGTACCTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | CATTCTGATCAGATTGCTCCTTCCAAGCTAGGGAACTaGGTCCTCACCATGTACTCTTGGGGCTCCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: HSDQIAPSKLGN*VLTMYSWGSHH Trigger: GTGATGGGAGCCCCAAGAGTACATGGTGAGGACTCAGTTCCCTAGCTTGGAAGGAGCAATCTGATCAGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | ACACCTCAGGGGCCATTCTCTCTGATGACATGCCTTTaGTGCGGTAGGGGAAGACAGTACAACATCTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TPQGPFSLMTCL*CGRGRQYNILE Trigger: CTCTAAGATGTTGTACTGTCTTCCCCTACCGCAGCAAAGGCATGTCATCAGAGAGAATGGCCCCTGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | TGTCTAATCCATGTTTACTCCCTGGAAGAACTGGTGTaGTTTCCTATTGGAGGAGGAGCCCGCCACCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLIHVYSLEELV*FPIGGGARHHL Trigger: GAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACATGGATTAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | CAGAAGTACACAGAGTCTTCACTGTTGCTGTCCTGCTaGTCATCAAATTTGCGGATCTGGGCCTTGAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: QKYTESSLLLSC*SSNLRIWALRC Trigger: GCACCTCAAGGCCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTCTGTGTACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAAAAGATTTGGATCTCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTGACAGAGTCTTCACTGTaGCTGTCCTGCTGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: TKKIWISQALSWQTFNSLTESSL*LSCWSS Trigger: TGATGACCAGCAGGACAGCAACAGTGAAGACTCTGT...CAGACTGTTGAAGGTCTGCCAGGACAAGGCCTGGGAGATCCAAATCTTTTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | GACTTGTCATCCTCAGTGGCTCAGGTTAGTTTCATCTaGGGAGCTATGCAGAGTGGACAGGATCAAGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: DLSSSVAQVSFI*GAMQSGQDQGV Trigger: GACACCTTGATCCTGTCCACTCTGCATAGCTCCTCAGATGAAACTAACCTGAGCCACTGAGGATGACAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | TCCTTGATTGTTAGTTCCTCAGGGTGCCCTGCTTATTaGGTGTGCAGTCCATGCTGCTCTGAAACTGACACC | + |
|
Preference number: 3 (lower is better) Translates to: SLIVSSSGCPAY*VCSPCCSETDT Trigger: GGTGTCAGTTTCAGAGCAGCATGGACTGCACACTCAATAAGCAGGGCACCCTGAGGAACTAACAATCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | TCTTCCAGATGTAGCCTGGTACTTCCCTCACCTCCTTaGTTGTTAGTTCCTCAGGGTGCCCTGCTTATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SSRCSLVLPSPP*LLVPQGALLIE Trigger: CTCAATAAGCAGGGCACCCTGAGGAACTAACAATCAAGGAGGTGAGGGAAGTACCAGGCTACATCTGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | TGTGACTCCATGCATAGCTGGTACTTGGCCTGGTGGTaGCCAAGTAAGATGAACAGGATTCGGTTTCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: CDSMHSWYLAWW*PSKMNRIRFPS Trigger: GGATGGAAACCGAATCCTGTTCATCTTACTTGGTCACCACCAGGCCAAGTACCAGCTATGCATGGAGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | GAAGGTGGGGACAGATTGAGATGTGAATTTAACTGTTaGTGTGTGGTGATGAAGGGAGCTGGGGGAGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGGDRLRCEFNC*CVVMKGAGGVA Trigger: GGCTACTCCCCCAGCTCCCTTCATCACCACACATCAACAGTTAAATTCACATCTCAATCTGTCCCCACCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR GCA 72 bp | TTCTGTTCCATATTCCACAGGGCCATGCCGCTTGGGTaGAGGATACAGCTAATGACCCTAGGTTTTATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FCSIFHRAMPLG*RIQLMTLGFIP Trigger: TGGGATAAAACCTAGGGTCATTAGCTGTATCCTGCACCCAAGCGGCATGGCCCTGTGGAATATGGAACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | TCCAGGACACTCAGAAGTACACAGAGTCTTCACTGTTaGTGTCCTGCTGGTCATCAAATTTGCGGATCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SRTLRSTQSLHC*CPAGHQICGSG Trigger: CCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTCTGTGTACTTCTGAGTGTCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | GCTGTCCACAGAAAGAGTCTTGGGCTTATGGAGACATaGGTATGGGGCTGGTGTTCTCAGAGGAGAAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: AVHRKSLGLMET*VWGWCSQRRKV Trigger: AACTTTTCTCCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCTGTGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTACCAGGTTCTCTATGTTaGGCCTGGGTGCCTCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVPGSLC*AWVPQC Trigger: GCACTGAGGCACCCAGGCCAAACATAGAGAACCTGG...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | GTCACTCCATCATGCCCTCAAACTAATCCAGACCTCTaGGCTCCTGCCTCTGTTCTGTTCTGTTCCATATTC | + |
|
Preference number: 3 (lower is better) Translates to: VTPSCPQTNPDL*APASVLFCSIF Trigger: GAATATGGAACAGAACAGAACAGAGGCAGGAGCTCAGAGGTCTGGATTAGTTTGAGGGCATGATGGAGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | AGGTATTCCCTTACTTGGTCAGCCTCTGCTTTCTTCTaGAGTATTGGGAAAGTAACCCCAGGGTCTAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RYSLTWSASAFF*SIGKVTPGSSL Trigger: CAGACTAGACCCTGGGGTTACTTTCCCAATACTGCAGAAGAAAGCAGAGGCTGACCAAGTAAGGGAATACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | TCTGTTCTGTTCCATATTCCACAGGGCCATGCCGCTTaGGTGCAGGATACAGCTAATGACCCTAGGTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SVLFHIPQGHAA*VQDTANDPRFY Trigger: ATAAAACCTAGGGTCATTAGCTGTATCCTGCACCCAAGCGGCATGGCCCTGTGGAATATGGAACAGAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | AAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTaGTGTTCTCAGAGGAGAAAAGTTCTGTTCGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KSLGLMETWVWG*CSQRRKVLFVA Trigger: AGCAACGAACAGAACTTTTCTCCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | GAGCTTGATTTCTGCCTCTTATTTCTACTCCAGGTCTaGAGGCTTTTTGGTGCCCAAATTGGGTACTCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: ELDFCLLFLLQV*RLFGAQIGYSS Trigger: CGAGGAGTACCCAATTTGGGCACCAAAAAGCCTCCAGACCTGGAGTAGAAATAAGAGGCAGAAATCAAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | AGACTCGCCTCACTACTGTGGAGGAATAAGAGGCCCTaGAAAAGGCTCTCTCAAAACAGCTTTGTGATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLASLLWRNKRP*KRLSQNSFVIA Trigger: AGCAATCACAAAGCTGTTTTGAGAGAGCCTTTTCCAGGGCCTCTTATTCCTCCACAGTAGTGAGGCGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | ATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTaGCCAATAATAAAGGTATTCCCTTACTTGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: MVHGGHHGMMKT*PIIKVFPYLVS Trigger: GCTGACCAAGTAAGGGAATACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | AGGATCCCCTGGATACATGGTCCACGGAGGGCACCATaGGATGATGAAAACCTGGCCAATAATAAAGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: RIPWIHGPRRAP*DDENLANNKGI Trigger: AATACCTTTATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCAGGGGATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR TCA 72 bp | AGCATCTATGAGGCTGAGGCAGGAGGGTTTCCAGTTTaGAGTCAGCTTGGGTTACATAGCAAAACCTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SIYEAEAGGFPV*SQLGLHSKTWL Trigger: TAACCAGGTTTTGCTATGTAACCCAAGCTGACTTCAAACTGGAAACCCTCCTGCCTCAGCCTCATAGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR TCA 72 bp | ATAGCTGGTACTTGGCCTGGTGGTGACCAAGTAAGATaGACAGGATTCGGTTTCCATCCTTTGCGTTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IAGTWPGGDQVR*TGFGFHPLRFK Trigger: CTTGAAACGCAAAGGATGGAAACCGAATCCTGTTCATCTTACTTGGTCACCACCAGGCCAAGTACCAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CCA 72 bp | CTGATACTCAGCAGGATTCAACAAATGGTTCTTGTCTaGAATTACCATCCACCCAGCCCTTCACACCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LILSRIQQMVLV*NYHPPSPSHLT Trigger: TGTCAGGTGTGAAGGGCTGGGTGGATGGTAATTCCAGACAAGAACCATTTGTTGAATCCTGCTGAGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR GCA 72 bp | CCAATAATAAAGGTATTCCCTTACTTGGTCAGCCTCTaGTTTCTTCTGCAGTATTGGGAAAGTAACCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PIIKVFPYLVSL*FLLQYWESNPR Trigger: CCTGGGGTTACTTTCCCAATACTGCAGAAGAAAGCAGAGGCTGACCAAGTAAGGGAATACCTTTATTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CCA 72 bp | CTAGCTGATCTACTTTTACTACAAACTCCACACATGTaGTCCTCTCTGTTGGAAGACATCTTCCTAGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LADLLLLQTPHM*SSLLEDIFLGD Trigger: GTCTCCTAGGAAGATGTCTTCCAACAGAGAGGACCACATGTGTGGAGTTTGTAGTAAAAGTAGATCAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCGGACACTGCTAGTGCCCAGTGTGTGCCCGGTCCCCTGTGTGGCCTCACGAGTGGCTTCCGGGCCTaGGAGCCTGGCCAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PPDTASAQCVPGPLCGLTSGFRA*EPGQRT Trigger: GGTCCTCTGGCCAGGCTCTCAGGCCCGGAAGCCACT...CGTGAGGCCACACAGGGGACCGGGCACACACTGGGCACTAGCAGTGTCCGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCGTGCTGAGCCCTACCCCGCGGCCGGACGCTTTGGTGGCGGCGGCGCTTTCCCCAGCCGTGACTaGCCTTGTCATCCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRAEPYPAAGRFGGGGAFPSRD*PCHPCF Trigger: GAAGCAGGGATGACAAGGGCAGTCACGGCTGGGGAA...AGCGCCGCCGCCACCAAAGCGTCCGGCCGCGGGGTAGGGCTCAGCACGCAGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCGTGCTGAGCCCTACCCCGCGGCCGGACGCTTTGGTGGCGGCGGCGCTGTCATCCCTGCTTCCTaGAGATGCCTGTGGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRAEPYPAAGRFGGGGAVIPAS*RCLWPF Trigger: GAAAGGCCACAGGCATCTGCAGGAAGCAGGGATGAC...AGCGCCGCCGCCACCAAAGCGTCCGGCCGCGGGGTAGGGCTCAGCACGCAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | GGCGGCGCTGTACTGGGCATCGACAACGTGTGCGAGTaGGCGGCACGCCTGCTGTTCAGCACGGTCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVLGIDNVCE*AARLLFSTVEW Trigger: CCACTCGACCGTGCTGAACAGCAGGCGTGCCGCCAACTCGCACACGTTGTCGATGCCCAGTACAGCGCCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR TCA 90 bp | GATGAAGGGAGCTGGGGGAGTAGCCCAGCAGTGGTGGCACATGCCCTTGGTTCCAGTGGCTTCCGGGCCTaGGAGCCTGGCCAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DEGSWGSSPAVVAHALGSSGFRA*EPGQRT Trigger: GGTCCTCTGGCCAGGCTCTCAGGCCCGGAAGCCACT...GGAACCAAGGGCATGTGCCACCACTGCTGGGCTACTCCCCCAGCTCCCTTCATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGGGATGCTTCTCAGGGTaGAGTGGCTCCCGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLPIPAHETWGDRLHSWGCFSG*SGSRGR Trigger: GCGCCCCCGGGAGCCACTGCACCCTGAGAAGCATCC...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACCATCTCCAGCGGGGCAGGCATGCGTaGGGCTGCAGCTCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LEELVWFPIGGGARHHLQRGRHA*GCSSLA Trigger: CGCCAGAGAGCTGCAGCCCCACGCATGCCTGCCCCG...CTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCCTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCTCTCCCGGCCCGGGCTaGCTCTGCGGCCGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSSLLEDIFLGDSWPASGSPGPG*LCGRLE Trigger: CTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGA...GCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAGGACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACTCTCCCGGCCCGGGCTaGCTCTGCGGCCGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSLEELVWFPIGGGARHSPGPG*LCGRLE Trigger: CTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGA...GTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGCTGCTCTCTGGCCTAACACTACCCCCAGGCCCCTACTCAGACACTGCTCTGTTTCCCCAGCCGTaGCTGCCCTTGTCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSGLTLPPGPYSDTALFPQP*LPLSSL Trigger: CAGGGATGACAAGGGCAGTCACGGCTGGGGAAACAG...AGCAGTGTCTGAGTAGGGGCCTGGGGGTAGTGTTAGGCCAGAGAGCAGCAAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACCGGATGCTTCTCAGGGTaGAGTGGCTCCCGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FTPWKNWCGFLLEEEPATGCFSG*SGSRGR Trigger: GCGCCCCCGGGAGCCACTGCACCCTGAGAAGCATCC...GGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CAA 72 bp | AGCTATGCAGAGTGGACAGGATCAAGGTGTCCTGGATaGCGCCCCTGCAGGCAGGCCCCAAGCATTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYAEWTGSRCPG*RPCRQAPSIAQ Trigger: CTGGGCAATGCTTGGGGCCTGCCTGCAGGGGCGCAATCCAGGACACCTTGATCCTGTCCACTCTGCATAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| 3UTR CAA 72 bp | GCTGGGGGAGTAGCCCAGCAGTGGTGGCACATGCCCTaGGTTCCAACTCATGGGAGGCAGAGGCAGACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGGVAQQWWHMP*VPTHGRQRQTN Trigger: ATTGGTCTGCCTCTGCCTCCCATGAGTTGGAACCAAGGGCATGTGCCACCACTGCTGGGCTACTCCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR TCA 90 bp | ACTCAGTTGCCTATCCCTGCCCATGAGACCTGGGGAGACAGACTGCACAGCTGGTGCCTGTGGCCTTTCTaGCCCAGCCCATGTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLPIPAHETWGDRLHSWCLWPF*PSPCGE Trigger: CTCTCCACATGGGCTGGGTCAGAAAGGCCACAGGCA...CCAGCTGTGCAGTCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTGTTGCTGTCCTGCTGGTCATCAAATTTGCGGATCTGGGCCTTGAGGTGCGGGGCAGGCATGCGTaGGGCTGCAGCTCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FTVAVLLVIKFADLGLEVRGRHA*GCSSLA Trigger: CGCCAGAGAGCTGCAGCCCCACGCATGCCTGCCCCG...CACCTCAAGGCCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| 3UTR CAA 72 bp | TCCCATCCTGTCAGCAAAGGGAGGGTCTTGGGCCATTaGAAGCCCAGTCTGGCTCCAGCTGACAGGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHPVSKGRVLGH*KPSLAPADRRF Trigger: GAACCGCCTGTCAGCTGGAGCCAGACTGGGCTTCAAATGGCCCAAGACCCTCCCTTTGCTGACAGGATGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | CAGGTCAGGGATCCCCCACTGGTATTTCCCAGGGGTTaGCAGGCACATCAGTGGGAACCCTGGCCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVRDPPLVFPRG*QAHQWEPWPVS Trigger: AGACACAGGCCAGGGTTCCCACTGATGTGCCTGCAAACCCCTGGGAAATACCAGTGGGGGATCCCTGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR TCA 90 bp | TTTCATCTGAGGAGCTATGCAGAGTGGACAGGATCAAGGTGTCCTGGATTGCGCAGTGGCTTCCGGGCCTaGGAGCCTGGCCAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FHLRSYAEWTGSRCPGLRSGFRA*EPGQRT Trigger: GGTCCTCTGGCCAGGCTCTCAGGCCCGGAAGCCACT...GCGCAATCCAGGACACCTTGATCCTGTCCACTCTGCATAGCTCCTCAGATGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | ACCAAAAAGATTTGGATCTCCCAGGCCTTGTCCTGGCAGACCTTCAACAGTCTGGGATGCTTCTCAGGGTaGAGTGGCTCCCGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TKKIWISQALSWQTFNSLGCFSG*SGSRGR Trigger: GCGCCCCCGGGAGCCACTGCACCCTGAGAAGCATCC...CAGACTGTTGAAGGTCTGCCAGGACAAGGCCTGGGAGATCCAAATCTTTTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCCTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCCCCAGATCTCTGGGATaGTTCTCAGGGTGCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSSLLEDIFLGDSWPASGPRSLG*FSGCSG Trigger: GCCACTGCACCCTGAGAAGCATCCCAGAGATCTGGG...GCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTCTGACTATGCCCCCTGGAATCTACACAGCCATTGCCCCCATATGAGAAGTCAGGTACTGGGTTaGGGCGGGGTCCCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MPSDYAPWNLHSHCPHMRSQVLG*GGVPDL Trigger: GAGATCTGGGACCCCGCCTCAACCCAGTACCTGACT...TCTCATATGGGGGCAATGGCTGTGTAGATTCCAGGGGGCATAGTCAGAAGGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCTTCACTGTTGCTGTCCTGCTGGTCATCAAATTTGCGGATCTGGGCCTAGTCAGGTACTGGGTTaGGGCGGGGTCCCAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSLHCCCPAGHQICGSGPSQVLG*GGVPDL Trigger: GAGATCTGGGACCCCGCCTCAACCCAGTACCTGACT...AGGCCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCCTGGGACTTGTCATTCTCCTGACATGAGCTaGCATGCGAGCCTCCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHLPRRLLACKWPGTCHSPDMS*HASLLL Trigger: CAGAAGGAGGCTCGCATGGCAGCTCATGTCAGGAGA...ATGACAAGTCCCAGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| 3UTR CAA 72 bp | CAGTTTATAGCCAAAGGCTGCCAAGGGGAGACTCAGTaGCCTATCCCTGCCCATGAGACCTGGGGAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QFIAKGCQGETQ*PIPAHETWGDR Trigger: TCTGTCTCCCCAGGTCTCATGGGCAGGGATAGGCAACTGAGTCTCCCCTTGGCAGCCTTTGGCTATAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTCTGTTGGAAGACATCTTCCTAGGAGACTCCTGGCCTGCAAGTGGCCTTCTCAAACTCTCTCCTaGCATGAGCTGCCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSVGRHLPRRLLACKWPSQTLS*HELPCE Trigger: CTCGCATGGCAGCTCATGTCAGGAGAGAGTTTGAGA...AGGCCACTTGCAGGCCAGGAGTCTCCTAGGAAGATGTCTTCCAACAGAGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | TTTCATCTGAGGAGCTATGCAGAGTGGACAGGATCAAGGTGTCCTGGATTGCGCCCCAGATCTCTGGGATaGTTCTCAGGGTGCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FHLRSYAEWTGSRCPGLRPRSLG*FSGCSG Trigger: GCCACTGCACCCTGAGAAGCATCCCAGAGATCTGGG...GCGCAATCCAGGACACCTTGATCCTGTCCACTCTGCATAGCTCCTCAGATGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | GTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACATCTGGGCCTTGAGGTaGCTGAGTTTACCCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYSLEELVWFPIGGGARHIWALR*LSLPFR Trigger: CCTGAAGGGTAAACTCAGGCACCTCAAGGCCCAGAT...GTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTTGGGTTACATAGCAAAACCTGGTTAGAGAAAAACCACATGCACGTACGGGGCAGGCATGCGTaGGGCTGCAGCTCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQLGLHSKTWLEKNHMHVRGRHA*GCSSLA Trigger: CGCCAGAGAGCTGCAGCCCCACGCATGCCTGCCCCG...TACGTGCATGTGGTTTTTCTCTAACCAGGTTTTGCTATGTAACCCAAGCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | TTGGGTACTCCTCGTGGGCTGTCCACAGAAAGAGTCTaGGGCTTATGGAGACATGGGTATGGGGCTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTPRGLSTERV*GLWRHGYGAGV Trigger: AACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCTGTGGACAGCCCACGAGGAGTACCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | ATGTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATaGGAGGAGGAGCCCGCCACCATCTCCAGGACACTC | + |
|
Preference number: 4 (lower is better) Translates to: MFTPWKNWCGFL*EEEPATISRTL Trigger: GAGTGTCCTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGTCTTGGGCTTATGGAGACATGGGTATGGGGCTGGTGTTCTCAGAGGTGCCCTTGTCATCCCTaGTTCCTGCAGATGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSLGLMETWVWGWCSQRCPCHP*FLQMPV Trigger: CACAGGCATCTGCAGGAAGCAGGGATGACAAGGGCA...CCTCTGAGAACACCAGCCCCATACCCATGTCTCCATAAGCCCAAGACTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS-3UTR CCA 90 bp | AACTCATGCCTTCTGACTATGCCCCCTGGAATCTACACAGCCATTGCCCCCATAGAGAACTCGCCATACTaGTCCTGGAACACTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSCLLTMPPGIYTAIAPIENSPY*SWNTAA Trigger: TGCCGCAGTGTTCCAGGACCAGTATGGCGAGTTCTC...TATGGGGGCAATGGCTGTGTAGATTCCAGGGGGCATAGTCAGAAGGCATGAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| 3UTR CAA 72 bp | TTCTACTCCAGGTCTGGAGGCTTTTTGGTGCCCAAATaGGGTACTCCTCGTGGGCTGTCCACAGAAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FYSRSGGFLVPK*GTPRGLSTERV Trigger: GACTCTTTCTGTGGACAGCCCACGAGGAGTACCCAATTTGGGCACCAAAAAGCCTCCAGACCTGGAGTAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | GAGTCTTCACTGTTGCTGTCCTGCTGGTCATCAAATTaGCGGATCTGGGCCTTGAGGTGCCTGAGTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLLLSCWSSN*RIWALRCLSLP Trigger: GGGTAAACTCAGGCACCTCAAGGCCCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR TCA 90 bp | TGGATACATGGTCCACGGAGGGCACCATGGGATGATGAAAACCTGGCCAATAATTCTCAAACTCTCTCCTaGCATGAGCTGCCATGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WIHGPRRAPWDDENLANNSQTLS*HELPCE Trigger: CTCGCATGGCAGCTCATGTCAGGAGAGAGTTTGAGA...ATTATTGGCCAGGTTTTCATCATCCCATGGTGCCCTCCGTGGACCATGTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCTAGCTGATCTACTTTTACTACAAACTCCACACATGTGGTCCTCTCTGAGCAGGGCCTCCAGTTaGTGGAGCTTAGCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QALADLLLLQTPHMWSSLSRASS*WSLACV Trigger: CACACAGGCTAAGCTCCAGCAACTGGAGGCCCTGCT...CAGAGAGGACCACATGTGTGGAGTTTGTAGTAAAAGTAGATCAGCTAGGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| 3UTR CAA 72 bp | CTCCAGGACACTCAGAAGTACACAGAGTCTTCACTGTaGCTGTCCTGCTGGTCATCAAATTTGCGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQDTQKYTESSL*LSCWSSNLRIW Trigger: CCAGATCCGCAAATTTGATGACCAGCAGGACAGCAACAGTGAAGACTCTGTGTACTTCTGAGTGTCCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS-3UTR CCA 90 bp | ATCCATGTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCTGTTGCTGTCCTGCTaGTCATCAAATTTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IHVYSLEELVWFPIGGGALLLSC*SSNLRI Trigger: GATCCGCAAATTTGATGACCAGCAGGACAGCAACAG...GGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS-3UTR GCA 90 bp | TCTACACAGCCATTGCCCCCATATGAGACCTCAGACAGGTCTATGAACCTCATTCAGAGTCTTCACTGTTaGTGTCCTGCTGGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: STQPLPPYETSDRSMNLIQSLHC*CPAGHQ Trigger: TTGATGACCAGCAGGACAGCAACAGTGAAGACTCTG...AATGAGGTTCATAGACCTGTCTGAGGTCTCATATGGGGGCAATGGCTGTGTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| 3UTR CAA 72 bp | GGTGACTCCTGCTCTGTCCTTGCCCAGACTGAATTTTaGTCTAAACTTGTCTGTCTGATGGAAAGTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSCSVLAQTEF*SKLVCLMESPD Trigger: ATCAGGACTTTCCATCAGACAGACAAGTTTAGACAAAAATTCAGTCTGGGCAAGGACAGAGCAGGAGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | TTCGGTTTCCATCCTTTGCGTTTCAAGTCTGTTCCATaGTGTCCTCTACCAGGAAATGCTTTTCCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FGFHPLRFKSVP*CPLPGNAFPSA Trigger: GGCAGATGGAAAAGCATTTCCTGGTAGAGGACACAATGGAACAGACTTGAAACGCAAAGGATGGAAACCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | GTCCCTTTAAGTTTGAAGGTGACTCCTGCTCTGTCCTaGCCCAGACTGAATTTTTGTCTAAACTTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSLKVTPALS*PRLNFCLNLSV Trigger: GACAGACAAGTTTAGACAAAAATTCAGTCTGGGCAAGGACAGAGCAGGAGTCACCTTCAAACTTAAAGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| 3UTR CAA 72 bp | ATGAAAACCTGGCCAATAATAAAGGTATTCCCTTACTaGGTCAGCCTCTGCTTTCTTCTGCAGTATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MKTWPIIKVFPY*VSLCFLLQYWE Trigger: TTCCCAATACTGCAGAAGAAAGCAGAGGCTGACCAAGTAAGGGAATACCTTTATTATTGGCCAGGTTTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||
| CDS GCA 90 bp | ATCTTCCGGGGCCTCACGCAGAGCTCTCCCGGCCCGGGCTGGCTCTaGGGCCGTCTGGAGCGCGGACGCTCCGGGGCAGGCATGCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: IFRGLTQSSPGPGWL*GRLERGRSGAGMRG Trigger: CCCACGCATGCCTGCCCCGGAGCGTCCGCGCTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGAGCTCTGCGTGAGGCCCCGGAAGAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 90 bp | GCTCTGCGGCCGTCTGGAGCGCGGACGCTCCGGGGCAGGCATGCGTaGGGCTGCAGCTCTCTGGCGCCCCCTGGCGGCAGGGCGCGAATT | + |
|
Preference number: 5 (lower is better) Translates to: ALRPSGARTLRGRHA*GCSSLAPPGGRARI Trigger: AATTCGCGCCCTGCCGCCAGGGGGCGCCAGAGAGCTGCAGCCCCACGCATGCCTGCCCCGGAGCGTCCGCGCTCCAGACGGCCGCAGAGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 90 bp | AACACGATCTTCCGGGGCCTCACGCAGAGCTCTCCCGGCCCGGGCTaGCTCTGCGGCCGTCTGGAGCGCGGACGCTCCGGGGCAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: NTIFRGLTQSSPGPG*LCGRLERGRSGAGM Trigger: CATGCCTGCCCCGGAGCGTCCGCGCTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGAGCTCTGCGTGAGGCCCCGGAAGATCGTGTT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 90 bp | GCCTCCAGTTGCTGGAGCTTAGCCTGTGTGGCCCCCACCTCCCGCTaGAGCTCCGAGAACTCGCCATACTGGTCCTGGAACACTGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSCWSLACVAPTSR*SSENSPYWSWNTAA Trigger: TGCCGCAGTGTTCCAGGACCAGTATGGCGAGTTCTCGGAGCTCCAGCGGGAGGTGGGGGCCACACAGGCTAAGCTCCAGCAACTGGAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS GCA 90 bp | ACTGGGTTGAGGCGGGGTCCCAGATCTCTGGGATGCTTCTCAGGGTaGAGTGGCTCCCGGGGGCGCAGCTCATCCGCAAACACGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TGLRRGPRSLGCFSG*SGSRGRSSSANTIF Trigger: GAAGATCGTGTTTGCGGATGAGCTGCGCCCCCGGGAGCCACTGCACCCTGAGAAGCATCCCAGAGATCTGGGACCCCGCCTCAACCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS GCA 90 bp | CTCCCGCTGGAGCTCCGAGAACTCGCCATACTGGTCCTGGAACACTaGGGCATAGCGGCTCCGGTCCCTTCTGTTGGTCACTGGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPLELRELAILVLEH*GIAAPVPSVGHWWV Trigger: TACCCACCAGTGACCAACAGAAGGGACCGGAGCCGCTATGCCGCAGTGTTCCAGGACCAGTATGGCGAGTTCTCGGAGCTCCAGCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS GCA 90 bp | GCCAGGATCCCCTCGCTTCTTCTCAAACTCTCTCCTGACATGAGCTaGCATGCGAGCCTCCTTCTGGCTTCGTGGCGGGGGCAGCGACAG | + |
|
Preference number: 5 (lower is better) Translates to: ARIPSLLLKLSPDMS*HASLLLASWRGQRQ Trigger: CTGTCGCTGCCCCCGCCACGAAGCCAGAAGGAGGCTCGCATGGCAGCTCATGTCAGGAGAGAGTTTGAGAAGAAGCGAGGGGATCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS GCA 90 bp | GGCCTCTTGCCCTGTTTCCCCAGCCGTGACTGCCCTTGTCATCCCTaGTTCCTGCAGATGCCTGTGGCCTTTCTGACCCAGCCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLLPCFPSRDCPCHP*FLQMPVAFLTQPMW Trigger: CCACATGGGCTGGGTCAGAAAGGCCACAGGCATCTGCAGGAAGCAGGGATGACAAGGGCAGTCACGGCTGGGGAAACAGGGCAAGAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS TCA 90 bp | AGGAAGCCAGGATCCCCTCGCTTCTTCTCAAACTCTCTCCTGACATaGGCTGCCATGCGAGCCTCCTTCTGGCTTCGTGGCGGGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKPGSPRFFSNSLLT*AAMRASFWLRGGGS Trigger: GCTGCCCCCGCCACGAAGCCAGAAGGAGGCTCGCATGGCAGCTCATGTCAGGAGAGAGTTTGAGAAGAAGCGAGGGGATCCTGGCTTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS CCA 90 bp | GAACACTGCGGCATAGCGGCTCCGGTCCCTTCTGTTGGTCACTGGTaGGTACTTAAGCTCGTAGTCAGGTACTGGGTTGAGGCGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EHCGIAAPVPSVGHW*VLKLVVRYWVEAGS Trigger: GGACCCCGCCTCAACCCAGTACCTGACTACGAGCTTAAGTACCCACCAGTGACCAACAGAAGGGACCGGAGCCGCTATGCCGCAGTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS CCA 90 bp | CTGGAACACTGCGGCATAGCGGCTCCGGTCCCTTCTGTTGGTCACTaGTGGGTACTTAAGCTCGTAGTCAGGTACTGGGTTGAGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEHCGIAAPVPSVGH*WVLKLVVRYWVEAG Trigger: CCCCGCCTCAACCCAGTACCTGACTACGAGCTTAAGTACCCACCAGTGACCAACAGAAGGGACCGGAGCCGCTATGCCGCAGTGTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACCATCTCCAGCAGCAGGGCCTCCAGTaGCTGGAGCTTAGCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LEELVWFPIGGGARHHLQQQGLQ*LELSLC Trigger: ACACAGGCTAAGCTCCAGCAACTGGAGGCCCTGCTG...CTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACCATCTCCAGGACATTGCGGATCTGGGCCTaGAGGTGCCTGAGTTTACCC | + |
|
Preference number: 5 (lower is better) Translates to: KNWCGFLLEEEPATISRTLRIWA*RCLSLP Trigger: GGGTAAACTCAGGCACCTCAAGGCCCAGATCCGCAA...TGTCCTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCCCGCCACCATCTCCAGGACACTCCGGTCCCTTCTGTaGGTCACTGGTGGGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: KNWCGFLLEEEPATISRTLRSLL*VTGGYL Trigger: TAAGTACCCACCAGTGACCAACAGAAGGGACCGGAG...TGTCCTGGAGATGGTGGCGGGCTCCTCCTCCAATAGGAAACCACACCAGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS-3UTR CAA 90 bp | AATCCATGTTTACTCCCTGGAAGAACTGGTGTGGTTTCCTATTGGAGGAGGAGCACAGAGTCTTCACTGTaGCTGTCCTGCTGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: NPCLLPGRTGVVSYWRRSTESSL*LSCWSS Trigger: TGATGACCAGCAGGACAGCAACAGTGAAGACTCTGT...GCTCCTCCTCCAATAGGAAACCACACCAGTTCTTCCAGGGAGTAAACATGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS GCA 72 bp | GGCCTCACGCAGAGCTCTCCCGGCCCGGGCTGGCTCTaGGGCCGTCTGGAGCGCGGACGCTCCGGGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLTQSSPGPGWL*GRLERGRSGAG Trigger: GCCTGCCCCGGAGCGTCCGCGCTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGAGCTCTGCGTGAGGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 72 bp | CCGTCTGGAGCGCGGACGCTCCGGGGCAGGCATGCGTaGGGCTGCAGCTCTCTGGCGCCCCCTGGCGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSGARTLRGRHA*GCSSLAPPGGR Trigger: CCTGCCGCCAGGGGGCGCCAGAGAGCTGCAGCCCCACGCATGCCTGCCCCGGAGCGTCCGCGCTCCAGACGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 72 bp | AGAGCTCTCCCGGCCCGGGCTGGCTCTGCGGCCGTCTaGAGCGCGGACGCTCCGGGGCAGGCATGCGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RALPARAGSAAV*SADAPGQACVG Trigger: CCCCACGCATGCCTGCCCCGGAGCGTCCGCGCTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGAGCTCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 72 bp | TTCCGGGGCCTCACGCAGAGCTCTCCCGGCCCGGGCTaGCTCTGCGGCCGTCTGGAGCGCGGACGCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRGLTQSSPGPG*LCGRLERGRSG Trigger: CCCGGAGCGTCCGCGCTCCAGACGGCCGCAGAGCCAGCCCGGGCCGGGAGAGCTCTGCGTGAGGCCCCGGAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS GCA 72 bp | CAGCTCTCTGGCGCCCCCTGGCGGCAGGGCGCGAATTaGAAGTGGCTTCCGGGCCTGAGAGCCTGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLSGAPWRQGAN*KWLPGLRAWPE Trigger: CTCTGGCCAGGCTCTCAGGCCCGGAAGCCACTTGCAATTCGCGCCCTGCCGCCAGGGGGCGCCAGAGAGCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CAA 72 bp | GCAGCTCTCTGGCGCCCCCTGGCGGCAGGGCGCGAATaGCAAGTGGCTTCCGGGCCTGAGAGCCTGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AALWRPLAAGRE*QVASGPESLAR Trigger: TCTGGCCAGGCTCTCAGGCCCGGAAGCCACTTGCAATTCGCGCCCTGCCGCCAGGGGGCGCCAGAGAGCTGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS GCA 72 bp | GGTACTGGGTTGAGGCGGGGTCCCAGATCTCTGGGATaGTTCTCAGGGTGCAGTGGCTCCCGGGGGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTGLRRGPRSLG*FSGCSGSRGRS Trigger: GCTGCGCCCCCGGGAGCCACTGCACCCTGAGAAGCATCCCAGAGATCTGGGACCCCGCCTCAACCCAGTACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS CCA 72 bp | GGGTCCCAGATCTCTGGGATGCTTCTCAGGGTGCAGTaGCTCCCGGGGGCGCAGCTCATCCGCAAACACGAT | + |
|
Preference number: 6 (lower is better) Translates to: GSQISGMLLRVQ*LPGAQLIRKHD Trigger: ATCGTGTTTGCGGATGAGCTGCGCCCCCGGGAGCCACTGCACCCTGAGAAGCATCCCAGAGATCTGGGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002469.9 ENSMUST00000110051.2 ENSMUST00000110052.2 |
||
| CDS GCA 72 bp | GAGCTCCGAGAACTCGCCATACTGGTCCTGGAACACTaGGGCATAGCGGCTCCGGTCCCTTCTGTTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ELRELAILVLEH*GIAAPVPSVGH Trigger: GTGACCAACAGAAGGGACCGGAGCCGCTATGCCGCAGTGTTCCAGGACCAGTATGGCGAGTTCTCGGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS GCA 72 bp | CCCTCGCTTCTTCTCAAACTCTCTCCTGACATGAGCTaGCATGCGAGCCTCCTTCTGGCTTCGTGGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSLLLKLSPDMS*HASLLLASWRG Trigger: CCCCCGCCACGAAGCCAGAAGGAGGCTCGCATGGCAGCTCATGTCAGGAGAGAGTTTGAGAAGAAGCGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS GCA 72 bp | CCTGTAGGCCTCTTGCCCTGTTTCCCCAGCCGTGACTaGCCTTGTCATCCCTGCTTCCTGCAGATGCCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PVGLLPCFPSRD*PCHPCFLQMPV Trigger: CACAGGCATCTGCAGGAAGCAGGGATGACAAGGGCAGTCACGGCTGGGGAAACAGGGCAAGAGGCCTACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110052.2 |
||
| CDS CCA 72 bp | GGCATAGCGGCTCCGGTCCCTTCTGTTGGTCACTGGTaGGTACTTAAGCTCGTAGTCAGGTACTGGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GIAAPVPSVGHW*VLKLVVRYWVE Trigger: CTCAACCCAGTACCTGACTACGAGCTTAAGTACCCACCAGTGACCAACAGAAGGGACCGGAGCCGCTATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS CCA 72 bp | TGCGGCATAGCGGCTCCGGTCCCTTCTGTTGGTCACTaGTGGGTACTTAAGCTCGTAGTCAGGTACTGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: CGIAAPVPSVGH*WVLKLVVRYWV Trigger: AACCCAGTACCTGACTACGAGCTTAAGTACCCACCAGTGACCAACAGAAGGGACCGGAGCCGCTATGCCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002469.9 |
||
| CDS TCA 72 bp | GGATCCCCTCGCTTCTTCTCAAACTCTCTCCTGACATaGGCTGCCATGCGAGCCTCCTTAGCTCGTAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSPRFFSNSLLT*AAMRASLARSQ Trigger: CTGACTACGAGCTAAGGAGGCTCGCATGGCAGCTCATGTCAGGAGAGAGTTTGAGAAGAAGCGAGGGGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110051.2 |
||