RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OBP2A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000062061

Ensembl transcript IDs: ENSMUST00000077667.4

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGGAGCAGGTACTGAGGTGGTGGTGGTGAAGCAGTGGGAAGTTTaGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCAGCTTGGTGTTG +
Preference number: 1 (lower is better)
Translates to: RGAGTEVVVVKQWEV*SRRGVVKGCPSLVL
Trigger: CAACACCAAGCTGGGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACCACCACCTCAGTACCTGCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
3UTR CAA 90 bp TGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCAGCTaGGTGTTGGAAGCAAGGCTGGCTCAGCTGTTGCAGACCTGGGTA +
Preference number: 2 (lower is better)
Translates to: WEVWSRRGVVKGCPS*VLEARLAQLLQTWV
Trigger: TACCCAGGTCTGCAACAGCTGAGCCAGCCTTGCTTCCAACACCAAGCTGGGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
3UTR-3UTR CCA 90 bp GGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCTGTTGGAAGCAAGGCTaGCTCAGCTGTTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: GGEAVGSLVQERCGEGMSCWKQG*LSCCRP
Trigger: AGGTCTGCAACAGCTGAGCCAGCCTTGCTTCCAACA...GGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
3UTR CCA 72 bp GGTACTGAGGTGGTGGTGGTGAAGCAGTGGGAAGTTTaGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCAGC +
Preference number: 3 (lower is better)
Translates to: GTEVVVVKQWEV*SRRGVVKGCPS
Trigger: GCTGGGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACCACCACCTCAGTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR TCA 90 bp GTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCTCTGGCGGGGCTTCCTaGGCCTTCAGGACAGCCACC +
Preference number: 4 (lower is better)
Translates to: VVKQWEVWSRRGVVKGCPSGGAS*AFRTAT
Trigger: GGTGGCTGTCCTGAAGGCTCAGGAAGCCCCGCCAGA...GGGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
3UTR CAA 72 bp AGGAGAGGTGTGGTGAAGGGATGTCCCAGCTTGGTGTaGGAAGCAAGGCTGGCTCAGCTGTTGCAGACCTGG +
Preference number: 4 (lower is better)
Translates to: RRGVVKGCPSLV*EARLAQLLQTW
Trigger: CCAGGTCTGCAACAGCTGAGCCAGCCTTGCTTCCAACACCAAGCTGGGACATCCCTTCACCACACCTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
3UTR CAA 72 bp TGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCAGCTaGGTGTTGGAAGCAAGGCTGGCTCAGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: WSRRGVVKGCPS*VLEARLAQLLQ
Trigger: CTGCAACAGCTGAGCCAGCCTTGCTTCCAACACCAAGCTGGGACATCCCTTCACCACACCTCTCCTGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR GCA 90 bp GGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCGTGTACCATGGCCTTTaGGTACCAGATCCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: GGEAVGSLVQERCGEGMSVYHGL*VPDPRV
Trigger: TACTCTGGGATCTGGTACGCAAAGGCCATGGTACAC...GGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR CCA 90 bp GGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCTGGGTATCTTGTGACTaGGTAGGGTACCATTGTGTA +
Preference number: 4 (lower is better)
Translates to: GGEAVGSLVQERCGEGMSWVSCD*VGYHCV
Trigger: TACACAATGGTACCCTACCCAGTCACAAGATACCCA...GGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR CCA 90 bp GTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCTTCTTCCATGGCCTCTaGATTTTCACCAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: VVKQWEVWSRRGVVKGCPFFHGL*IFTRVS
Trigger: AGAGACTCTGGTGAAAATCCAGAGGCCATGGAAGAA...GGGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR GCA 90 bp GGTGGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGGAAAAGCGGTGTATTTaGCAGGCTCTTCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GGGEAVGSLVQERCGEGMEKRCI*QALLFS
Trigger: AGAAAACAGAAGAGCCTGGCAAATACACCGCTTTTC...CATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR CCA 90 bp GGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCAGGGAAAACTATACTaGGTATCTTGTGACTGGGTA +
Preference number: 4 (lower is better)
Translates to: GGEAVGSLVQERCGEGMSQGKLY*VSCDWV
Trigger: TACCCAGTCACAAGATACCCAGTATAGTTTTCCCTG...GGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR CCA 90 bp GTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCTCCAGAATACAACTGTaGTCTCCAAGTCTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VVKQWEVWSRRGVVKGCPSRIQL*SPSLLL
Trigger: AAGAAGGAGACTTGGAGACCACAGTTGTATTCTGGA...GGGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR TCA 90 bp GGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCTTAAACTCACGGCAATaGCCATTGTTCCAGAATACA +
Preference number: 4 (lower is better)
Translates to: GGEAVGSLVQERCGEGMSLNSRQ*PLFQNT
Trigger: TGTATTCTGGAACAATGGTCATTGCCGTGAGTTTAA...GGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR CCA 90 bp GGTGGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTTTATCTCCGATCTCTaGCACAAACATGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GGGEAVGSLVQERCGEGMFISDL*HKHVFQ
Trigger: CTGGAAAACATGTTTGTGCCAGAGATCGGAGATAAA...CATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS CCA 90 bp CATGGCCTTTGCGTACCAGATCCCAGAGTAATCCACCAGGTCATCTaGCGGGGCTTCCTGAGCCTTCAGGACAGCCACCAGCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HGLCVPDPRVIHQVI*RGFLSLQDSHQPQQ
Trigger: CTGCTGGGGCTGGTGGCTGTCCTGAAGGCTCAGGAAGCCCCGCCAGATGACCTGGTGGATTACTCTGGGATCTGGTACGCAAAGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS-3UTR CAA 90 bp GGTGGTGAAGCAGTGGGAAGTTTGGTCCAGGAGAGGTGTGGTGAAGGGATGTCCCTGGGTAGGGTACCATaGTGTACCATGGCCTTTGCG +
Preference number: 5 (lower is better)
Translates to: GGEAVGSLVQERCGEGMSLGRVP*CTMAFA
Trigger: CGCAAAGGCCATGGTACACAATGGTACCCTACCCAG...GGACATCCCTTCACCACACCTCTCCTGGACCAAACTTCCCACTGCTTCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4
CDS CCA 72 bp CTTCCAGAGCTATTATTCTCACAGGGAAAACTATACTaGGTATCTTGTGACTGGGTAGGGTACCATTGTGTA +
Preference number: 6 (lower is better)
Translates to: LPELLFSQGKLY*VSCDWVGYHCV
Trigger: TACACAATGGTACCCTACCCAGTCACAAGATACCCAGTATAGTTTTCCCTGTGAGAATAATAGCTCTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077667.4