Pregenerated sensors for OBOX8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000099216

Ensembl transcript IDs: ENSMUST00000184356.2

Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	TTGAGCTGCTGCTGGCTCTACAAAGGTGGCAGAGTACTAGACCTTTaGCTATGGCTGAGTCTTATCTCTAGAGCTGAGTCTGATGTGTCT	+
Preference number: 1 (lower is better) Translates to: LSCCWLYKGGRVLDL*LWLSLISRAESDVS Trigger: AGACACATCAGACTCAGCTCTAGAGATAAGACTCAGCCATAGCCAAAGGTCTAGTACTCTGCCACCTTTGTAGAGCCAGCAGCAGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR-3UTR TCA 90 bp	CATCTTTTGAGGGAGCTTGAGCTGCTGCTGGCTCTACAAAGGTGGCAGAGTACTCCAGAGGAGCTGGGTTaGAGAAGGGAGTCGACATCT	+
Preference number: 2 (lower is better) Translates to: HLLRELELLLALQRWQSTPEELG*RRESTS Trigger: AGATGTCGACTCCCTTCTTCAACCCAGCTCCTCTGG...AGTACTCTGCCACCTTTGTAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR-3UTR TCA 90 bp	GGGACAACAGATTTGGTAAACATGGTATCTAGGGGATACCATGTAGTGGCCTTGCCAGTTCCCCAGGTCTaGTCAAGACTGGAGAAGCGA	+
Preference number: 2 (lower is better) Translates to: GTTDLVNMVSRGYHVVALPVPQV*SRLEKR Trigger: TCGCTTCTCCAGTCTTGATCAGACCTGGGGAACTGG...CAAGGCCACTACATGGTATCCCCTAGATACCATGTTTACCAAATCTGTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR-3UTR CCA 90 bp	GTCCTCAAAAATAATCTCATGGTAAGTAGGGTTGAGCAAAATCAGGGACAACAGAGATACCAGAGGAGCTaGGTTGAAGAAGGGAGTCGA	+
Preference number: 2 (lower is better) Translates to: VLKNNLMVSRVEQNQGQQRYQRS*VEEGSR Trigger: TCGACTCCCTTCTTCAACCCAGCTCCTCTGGTATCT...CTGTTGTCCCTGATTTTGCTCAACCCTACTTACCATGAGATTATTTTTGAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR CCA 72 bp	GGTACGAGCAGCCAGTTCCCCAGGTCTGATCAAGACTaGAGAAGCGATGGGAAGATACCAGAGGAGCTGGGT	+
Preference number: 3 (lower is better) Translates to: GTSSQFPRSDQD*RSDGKIPEELG Trigger: ACCCAGCTCCTCTGGTATCTTCCCATCGCTTCTCCAGTCTTGATCAGACCTGGGGAACTGGCTGCTCGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR TCA 72 bp	ATATGGATCTTCAAAGCTGCATCTTTTGAGGGAGCTTaGGCTGCTGCTGGCTCTACAAAGGTGGCAGAGTAC	+
Preference number: 3 (lower is better) Translates to: IWIFKAASFEGA*AAAGSTKVAEY Trigger: GTACTCTGCCACCTTTGTAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR-3UTR CAA 90 bp	GGGACAACAGATTTGGTAAACATGGTATCTAGGGGATACCATGTAGTGGCCTTGTCAAAGCTGCATCTTTaGAGGGAGCTTGAGCTGCTG	+
Preference number: 3 (lower is better) Translates to: GTTDLVNMVSRGYHVVALSKLHL*RELELL Trigger: CAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGA...CAAGGCCACTACATGGTATCCCCTAGATACCATGTTTACCAAATCTGTTGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR CCA 72 bp	ATGTGTCTTCAACTGCTACAGATTGAACTGGGTCCATaGCTTTTGTTGATGGAAATGAACCAGTGGTTGTTA	+
Preference number: 3 (lower is better) Translates to: MCLQLLQIELGP*LLLMEMNQWLL Trigger: TAACAACCACTGGTTCATTTCCATCAACAAAAGCCATGGACCCAGTTCAATCTGTAGCAGTTGAAGACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	CATCTTTTGAGGGAGCTTGAGCTGCTGCTGGCTCTACAAAGGTGGCAGAGTACTGGTAACATGTGGCCTTaGAAGGACCTGAGGAGCCAC	+
Preference number: 4 (lower is better) Translates to: HLLRELELLLALQRWQSTGNMWP*KDLRSH Trigger: GTGGCTCCTCAGGTCCTTCCAAGGCCACATGTTACC...AGTACTCTGCCACCTTTGTAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR GCA 90 bp	ATAGTCTGGGTACGAGCAGCCAGTTCCCCAGGTCTGATCAAGACTGGAGAAGCGGTTGGGGGAGCATTCTaGATTGGAAAGCCTGGAAAA	+
Preference number: 4 (lower is better) Translates to: IVWVRAASSPGLIKTGEAVGGAF*IGKPGK Trigger: TTTTCCAGGCTTTCCAATGCAGAATGCTCCCCCAAC...CGCTTCTCCAGTCTTGATCAGACCTGGGGAACTGGCTGCTCGTACCCAGACTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	AGCAGCCAGTTCCCCAGGTCTGATCAAGACTGGAGAAGCGATGGGAAGATACCATGTACTCTTTTGTTCTaGGCTATACCTGGTGCGCCC	+
Preference number: 4 (lower is better) Translates to: SSQFPRSDQDWRSDGKIPCTLLF*AIPGAP Trigger: GGGCGCACCAGGTATAGCCCAGAACAAAAGAGTACA...TGGTATCTTCCCATCGCTTCTCCAGTCTTGATCAGACCTGGGGAACTGGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR GCA 90 bp	CCAGGTCTGATCAAGACTGGAGAAGCGATGGGAAGATACCAGAGGAGCTGGGTTCACACAAACGCTTTTTaGCAGCTCCTGGCGTTGTTT	+
Preference number: 4 (lower is better) Translates to: PGLIKTGEAMGRYQRSWVHTNAF*QLLALF Trigger: AAACAACGCCAGGAGCTGGCAAAAAGCGTTTGTGTG...AACCCAGCTCCTCTGGTATCTTCCCATCGCTTCTCCAGTCTTGATCAGACCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	TATAGTCTGGGTACGAGCAGCCAGTTCCCCAGGTCTGATCAAGACTGGAGAAGCCTTTTTGCCAGCTCCTaGCGTTGTTTGAAGGAAGGA	+
Preference number: 4 (lower is better) Translates to: YSLGTSSQFPRSDQDWRSLFASS*RCLKEG Trigger: TCCTTCCTTCAAACAACGCCAGGAGCTGGCAAAAAG...GCTTCTCCAGTCTTGATCAGACCTGGGGAACTGGCTGCTCGTACCCAGACTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	TATGGATCTTCAAAGCTGCATCTTTTGAGGGAGCTTGAGCTGCTGCTGGCTCTACTTTCCGGTAACATGTaGCCTTGGAAGGACCTGAGG	+
Preference number: 4 (lower is better) Translates to: YGSSKLHLLRELELLLALLSGNM*PWKDLR Trigger: CCTCAGGTCCTTCCAAGGCCACATGTTACCGGAAAG...TAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR TCA 90 bp	GGGACAACAGATTTGGTAAACATGGTATCTAGGGGATACCATGTAGTGGCCTTGGCTCCTGGCGTTGTTTaGAGGAAGGATACTTGGACT	+
Preference number: 4 (lower is better) Translates to: GTTDLVNMVSRGYHVVALAPGVV*RKDTWT Trigger: AGTCCAAGTATCCTTCCTTCAAACAACGCCAGGAGC...CAAGGCCACTACATGGTATCCCCTAGATACCATGTTTACCAAATCTGTTGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	TATGGATCTTCAAAGCTGCATCTTTTGAGGGAGCTTGAGCTGCTGCTGGCTCTACTGCATTGGAAAGCCTaGAAAATAAGCAGGCTCCTG	+
Preference number: 4 (lower is better) Translates to: YGSSKLHLLRELELLLALLHWKA*KISRLL Trigger: CAGGAGCCTGCTTATTTTCCAGGCTTTCCAATGCAG...TAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	CCAGGTCTGATCAAGACTGGAGAAGCGATGGGAAGATACCAGAGGAGCTGGGTTAGGCATTTGGAAATCTaGAGACATTGGAGGTCTAAA	+
Preference number: 4 (lower is better) Translates to: PGLIKTGEAMGRYQRSWVRHLEI*RHWRSK Trigger: TTTAGACCTCCAATGTCTCCAGATTTCCAAATGCCT...AACCCAGCTCCTCTGGTATCTTCCCATCGCTTCTCCAGTCTTGATCAGACCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	TATGGATCTTCAAAGCTGCATCTTTTGAGGGAGCTTGAGCTGCTGCTGGCTCTAAGGGCTGAAGGCATTTaGAAATCTGGAGACATTGGA	+
Preference number: 4 (lower is better) Translates to: YGSSKLHLLRELELLLALRAEGI*KSGDIG Trigger: TCCAATGTCTCCAGATTTCCAAATGCCTTCAGCCCT...TAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR CAA 72 bp	GTAAACATGGTATCTAGGGGATACCATGTAGTGGCCTaGAACCCAGAACTAGTCCTGGGATGCAAGTATTTT	+
Preference number: 4 (lower is better) Translates to: VNMVSRGYHVVA*NPELVLGCKYF Trigger: AAAATACTTGCATCCCAGGACTAGTTCTGGGTTCAAGGCCACTACATGGTATCCCCTAGATACCATGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	GGGACAACAGATTTGGTAAACATGGTATCTAGGGGATACCATGTAGTGGCCTTGGAAATCTGGAGACATTaGAGGTCTAAAGATCCAATG	+
Preference number: 4 (lower is better) Translates to: GTTDLVNMVSRGYHVVALEIWRH*RSKDPM Trigger: CATTGGATCTTTAGACCTCCAATGTCTCCAGATTTC...CAAGGCCACTACATGGTATCCCCTAGATACCATGTTTACCAAATCTGTTGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
3UTR CAA 72 bp	TATTTTAGTCTATATGGATCTTCAAAGCTGCATCTTTaGAGGGAGCTTGAGCTGCTGCTGGCTCTACAAAGG	+
Preference number: 4 (lower is better) Translates to: YFSLYGSSKLHL*RELELLLALQR Trigger: CCTTTGTAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATATAGACTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CCA 90 bp	AAAAATAATCTCATGGTAAGTAGGGTTGAGCAAAATCAGGGACAACAGATTTGGGGGAGCATTCTGCATTaGAAAGCCTGGAAAATAAGC	+
Preference number: 4 (lower is better) Translates to: KNNLMVSRVEQNQGQQIWGSILH*KAWKIS Trigger: GCTTATTTTCCAGGCTTTCCAATGCAGAATGCTCCC...CCAAATCTGTTGTCCCTGATTTTGCTCAACCCTACTTACCATGAGATTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CAA 90 bp	CCAGGTCTGATCAAGACTGGAGAAGCGATGGGAAGATACCAGAGGAGCTGGGTTTTCCAGTGTACTCTTTaGTTCTGGGCTATACCTGGT	+
Preference number: 5 (lower is better) Translates to: PGLIKTGEAMGRYQRSWVFQCTL*FWAIPG Trigger: ACCAGGTATAGCCCAGAACAAAAGAGTACACTGGAA...AACCCAGCTCCTCTGGTATCTTCCCATCGCTTCTCCAGTCTTGATCAGACCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CAA 90 bp	TATGGATCTTCAAAGCTGCATCTTTTGAGGGAGCTTGAGCTGCTGCTGGCTCTATGCCAGCTCCTGGCGTaGTTTGAAGGAAGGATACTT	+
Preference number: 5 (lower is better) Translates to: YGSSKLHLLRELELLLALCQLLA*FEGRIL Trigger: AAGTATCCTTCCTTCAAACAACGCCAGGAGCTGGCA...TAGAGCCAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CAA 90 bp	AGTCTATATGGATCTTCAAAGCTGCATCTTTTGAGGGAGCTTGAGCTGCTGCTGAGCTCCTGGCGTTGTTaGAAGGAAGGATACTTGGAC	+
Preference number: 5 (lower is better) Translates to: SLYGSSKLHLLRELELLLSSWRC*KEGYLD Trigger: GTCCAAGTATCCTTCCTTCAAACAACGCCAGGAGCT...CAGCAGCAGCTCAAGCTCCCTCAAAAGATGCAGCTTTGAAGATCCATATAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS-3UTR CAA 90 bp	AAAAATAATCTCATGGTAAGTAGGGTTGAGCAAAATCAGGGACAACAGATTTGGGGGGAGCATTCTGCATaGGAAAGCCTGGAAAATAAG	+
Preference number: 5 (lower is better) Translates to: KNNLMVSRVEQNQGQQIWGEHSA*ESLENK Trigger: CTTATTTTCCAGGCTTTCCAATGCAGAATGCTCCCC...CCAAATCTGTTGTCCCTGATTTTGCTCAACCCTACTTACCATGAGATTATTTTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS CCA 90 bp	ATCCGAATCTGGTATTCCATCACACAAACGCTTTTTGCCAGCTCCTaGCGTTGTTTGAAGGAAGGATACTTGGACTTTTTAAAGAATTTT	+
Preference number: 5 (lower is better) Translates to: IRIWYSITQTLFASS*RCLKEGYLDFLKNF Trigger: AAAATTCTTTAAAAAGTCCAAGTATCCTTCCTTCAAACAACGCCAGGAGCTGGCAAAAAGCGTTTGTGTGATGGAATACCAGATTCGGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS CCA 72 bp	TATCTAGCCCTCCGGTTCTTAAACCATATCCGAATCTaGTATTCCATCACACAAACGCTTTTTGCCAGCTCC	+
Preference number: 6 (lower is better) Translates to: YLALRFLNHIRI*YSITQTLFASS Trigger: GGAGCTGGCAAAAAGCGTTTGTGTGATGGAATACCAGATTCGGATATGGTTTAAGAACCGGAGGGCTAGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184356.2
CDS CAA 72 bp	TTCCATCACACAAACGCTTTTTGCCAGCTCCTGGCGTaGTTTGAAGGAAGGATACTTGGACTTTTTAAAGAA	+
Preference number: 6 (lower is better) Translates to: FHHTNAFCQLLA*FEGRILGLFKE Trigger: TTCTTTAAAAAGTCCAAGTATCCTTCCTTCAAACAACGCCAGGAGCTGGCAAAAAGCGTTTGTGTGATGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000184356.2