Pregenerated sensors for OBOX7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055942Ensembl transcript IDs: ENSMUST00000069740.14, ENSMUST00000183424.2, ENSMUST00000183788.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGGCATCCTCTGGGGCTTaGGCGGCATATGCCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: AIRPGLVKELRGVSWSGGASSGA*AAYARP Trigger: CGGCCTGGCATATGCCGCCCAAGCCCCAGAGGATGC...CCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGCCATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGGCATCCTCTGGGGCTTaGGCGGCATATGCCAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: LGHKAWTRQGTERCKLEWASSGA*AAYARP Trigger: CGGCCTGGCATATGCCGCCCAAGCCCCAGAGGATGC...CCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR-3UTR CCA 90 bp | CATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTCAAGCAGGTATTCTTaGTATTCTTGCGGACAACAC | + |
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Preference number: 2 (lower is better) Translates to: HKAWTRQGTERCKLEWRGSSRYS*YSCGQH Trigger: GTGTTGTCCGCAAGAATACCAAGAATACCTGCTTGA...ACCCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR-3UTR TCA 90 bp | GAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTTCTCAGAGTAAGCCAGTCATCACTGCTAAGTCAGTCTaGTATTCAACTGCTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: ELRGVSWSGGVSQSKPVITAKSV*YSTAAD Trigger: ATCAGCAGCAGTTGAATATCAGACTGACTTAGCAGT...GATGACTGGCTTACTCTGAGAAACCCCTCCACTCCAGCTTACACCTCTCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR-3UTR TCA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGACTGCTAAGTCAGTCTaGTATTCAACTGCTGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: GSFSRACLQMDLNCEHPLTAKSV*YSTAAD Trigger: ATCAGCAGCAGTTGAATATCAGACTGACTTAGCAGT...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR CAA 90 bp | TTTCTCCAAATACTGAGAATAATGGTGTGTAAAACACACTTCTTCTaGGCCATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: FLQILRIMVCKTHFF*AIRPGLVKELRGVS Trigger: GCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGCCAAGAAGAAGTGTGTTTTACACACCATTATTCTCAGTATTTGGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTTCAAGCAGGTATTCTTaGTATTCTTGCGGACAACAC | + |
|
Preference number: 2 (lower is better) Translates to: ASHLICQKYSRILFQSLSSSRYS*YSCGQH Trigger: GTGTTGTCCGCAAGAATACCAAGAATACCTGCTTGA...AGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR TCA 72 bp | CTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTaGGCATCCTCTGGGGCTTGGGCGGCATATGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFQSLSADGPEL*ASSGAWAAYAR Trigger: CCTGGCATATGCCGCCCAAGCCCCAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR CCA 72 bp | AGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTaGAGTGGAGGGGTTTCTCAGAGTAAGCCAGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RPGLVKELRGVS*SGGVSQSKPVI Trigger: GATGACTGGCTTACTCTGAGAAACCCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR TCA 72 bp | AAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTaGATTGTGAGCATCCTCTGGGGCTTGGGCGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: KDPFPELVCRWT*IVSILWGLGGI Trigger: TATGCCGCCCAAGCCCCAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR-3UTR CAA 90 bp | CACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTTCTCCAAATACTGAGATCCTTTTCCAGAGCTaGTCTGCAGATGGACCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HCGMMLLQIRLVISPNTEILFQS*SADGPE Trigger: TTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGAT...CTCAGTATTTGGAGAAATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | GCCATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGATTCCTGGCTGCAGTTaGATTTGGGAATGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIRPGLVKELRGVSWSGGIPGCS*IWEWNP Trigger: AGGATTCCATTCCCAAATTCAACTGCAGCCAGGAAT...CCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | CTTGGCCATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGTCATCAAAATGTTTTTaGAGCAGGCGCTGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LGHKAWTRQGTERCKLEWSSKCF*SRRCCS Trigger: AGAACAGCAGCGCCTGCTGCAAAAACATTTTGATGA...CCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | GTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTTCTCAGAGTAAGCCAGGCGCTGCTGTTCTTTaGAGTACACAATGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VKELRGVSWSGGVSQSKPGAAVL*STQCVL Trigger: AAGAACGCATTGTGTACTCCAAAGAACAGCAGCGCC...TGGCTTACTCTGAGAAACCCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | CATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTTCTTTGCCAGTTCTTaGGGTATTTGGGAACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: HKAWTRQGTERCKLEWRGFFASS*GIWELI Trigger: AATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAA...ACCCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | GAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTTCTCAGAGTAAGCCAGTCATCATATTCGAAGCCACTTaGAGTTTTGGATGCAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELRGVSWSGGVSQSKPVIIFEAT*SFGCKE Trigger: CTCCTTGCATCCAAAACTTCAAGTGGCTTCGAATAT...GATGACTGGCTTACTCTGAGAAACCCCTCCACTCCAGCTTACACCTCTCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGATTCCTGGCTGCAGTTaGATTTGGGAATGGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFSRACLQMDLNCEHPLIPGCS*IWEWNP Trigger: AGGATTCCATTCCCAAATTCAACTGCAGCCAGGAAT...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | CATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTTCTCCTTTGGGTACTaGCACTCATCAAAATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKAWTRQGTERCKLEWRGFSFGY*HSSKCF Trigger: AAAACATTTTGATGAGTGCCAGTACCCAAAGGAGAA...ACCCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | TTCCAAGCTGTAACAGGGGCATGGCCATCAAGCAGGTATTCTTGGTATTCTTGCATGTGCCTGAACAGATaGACTCTCCATTGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQAVTGAWPSSRYSWYSCMCLNR*TLHCQR Trigger: CCTCTGACAATGGAGAGTCCATCTGTTCAGGCACAT...GCAAGAATACCAAGAATACCTGCTTGATGGCCATGCCCCTGTTACAGCTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGTTTAGAGCTTCCATTTaGCTCTGGCAGTGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSFSRACLQMDLNCEHPLFRASI*LWQCLF Trigger: AAACAAGCACTGCCAGAGTCAAATGGAAGCTCTAAA...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | CTTGGCCATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGCTTTGGAGTACACAATaGGTTCTTTTCGAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGHKAWTRQGTERCKLEWLWSTQ*VLFENF Trigger: GAAATTTTCGAAAAGAACGCATTGTGTACTCCAAAG...CCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATGGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | CATGGCCATCAAGCAGGTATTCTTGGTATTCTTGCGGACAACACATGTCCCTATGGCGCTGCTGTTCTTTaGAGTACACAATGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGHQAGILGILADNTCPYGAAVL*STQCVL Trigger: AAGAACGCATTGTGTACTCCAAAGAACAGCAGCGCC...ATAGGGACATGTGTTGTCCGCAAGAATACCAAGAATACCTGCTTGATGGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | GTTCCAAGCTGTAACAGGGGCATGGCCATCAAGCAGGTATTCTTGGTATTCTTGATATTCGAAGCCACTTaGAGTTTTGGATGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VPSCNRGMAIKQVFLVFLIFEAT*SFGCKE Trigger: CTCCTTGCATCCAAAACTTCAAGTGGCTTCGAATAT...CAAGAATACCAAGAATACCTGCTTGATGGCCATGCCCCTGTTACAGCTTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | CATGGCCATCAAGCAGGTATTCTTGGTATTCTTGCGGACAACACATGTCCCTATAATCCTCACCAAATGTaGCTGAACAGATGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: HGHQAGILGILADNTCPYNPHQM*LNRWTL Trigger: GAGAGTCCATCTGTTCAGGCACATTTGGTGAGGATT...ATAGGGACATGTGTTGTCCGCAAGAATACCAAGAATACCTGCTTGATGGCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGGCTTGTTTAATATTCTaGAGGTTCATCTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GSFSRACLQMDLNCEHPLACLIF*RFICLY Trigger: GTACAGGCAGATGAACCTCCAGAATATTAAACAAGC...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATATGTGCCTGAACAGATaGACTCTCCATTGTCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQGSFSRACLQMDLNCEHMCLNR*TLHCQR Trigger: CCTCTGACAATGGAGAGTCCATCTGTTCAGGCACAT...ATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | AGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGAGGCAACAACAGGTATaGAACCAGGAAAATGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SIQGSFSRACLQMDLNCERQQQV*NQENGL Trigger: CAACCCATTTTCCTGGTTCCATACCTGTTGTTGCCT...CTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | ATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATTACAGGGAAGATTCCTaGCTGCAGTTGAATTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: IQGSFSRACLQMDLNCEHYREDS*LQLNLG Trigger: TCCCAAATTCAACTGCAGCCAGGAATCTTCCCTGTA...ATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | ATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATACTGAAAGACTTGATTaGATTGTACTTCCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQGSFSRACLQMDLNCEHTERLD*IVLPGV Trigger: GACCCCAGGAAGTACAATGCAATCAAGTCTTTCAGT...ATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | GCCAGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTAGCCACTTGAAGTTTTaGATGCAAGGAGGGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: ASHLICQKYSRILFQSLSSHLKF*MQGGTF Trigger: GAAGGTCCCTCCTTGCATCCAAAACTTCAAGTGGCT...AGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| 3UTR CAA 72 bp | ATACTGAGAATAATGGTGTGTAAAACACACTTCTTCTaGGCCATAAGGCCTGGACTCGTCAAGGAACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILRIMVCKTHFF*AIRPGLVKELR Trigger: TCTCAGTTCCTTGACGAGTCCAGGCCTTATGGCCAAGAAGAAGTGTGTTTTACACACCATTATTCTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | AGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCATTCTGGAGGTTCATCTaGCTGTACTTAGCTCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SHLICQKYSRILFQSLSAFWRFI*LYLARL Trigger: CAACCGAGCTAAGTACAGGCAGATGAACCTCCAGAA...TGCAGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | CACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTTCTCCAAATACTGAGTTCTGGAGGTTCATCTaGCTGTACTTAGCTCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: HCGMMLLQIRLVISPNTEFWRFI*LYLARL Trigger: CAACCGAGCTAAGTACAGGCAGATGAACCTCCAGAA...CTCAGTATTTGGAGAAATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | AGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAAGCCACTTGAAGTTTTaGATGCAAGGAGGGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: SHLICQKYSRILFQSLSASHLKF*MQGGTF Trigger: GAAGGTCCCTCCTTGCATCCAAAACTTCAAGTGGCT...TGCAGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | GCCAGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTAGGCAACAACAGGTATaGAACCAGGAAAATGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ASHLICQKYSRILFQSLSRQQQV*NQENGL Trigger: CAACCCATTTTCCTGGTTCCATACCTGTTGTTGCCT...AGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | CTCAGAGTAAGCCAGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAAATCCTCACCAAATGTaGCTGAACAGATGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRVSQSSDMSKVFKDPFPNPHQM*LNRWTL Trigger: GAGAGTCCATCTGTTCAGGCACATTTGGTGAGGATT...TGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACTGGCTTACTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | CTCAGAGTAAGCCAGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCATACAGGGAAGATTCCTaGCTGCAGTTGAATTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LRVSQSSDMSKVFKDPFPYREDS*LQLNLG Trigger: TCCCAAATTCAACTGCAGCCAGGAATCTTCCCTGTA...TGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACTGGCTTACTCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | AGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAACTGAAAGACTTGATTaGATTGTACTTCCTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SHLICQKYSRILFQSLSATERLD*IVLPGV Trigger: GACCCCAGGAAGTACAATGCAATCAAGTCTTTCAGT...TGCAGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR TCA 90 bp | CACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTTCTCCAAATACTGAGTTCTTTGCCAGTTCTTaGGGTATTTGGGAACTGATT | + |
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Preference number: 4 (lower is better) Translates to: HCGMMLLQIRLVISPNTEFFASS*GIWELI Trigger: AATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAA...CTCAGTATTTGGAGAAATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CCA 90 bp | AGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGCTTGTTTAATATTCTaGAGGTTCATCTGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SHLICQKYSRILFQSLSAACLIF*RFICLY Trigger: GTACAGGCAGATGAACCTCCAGAATATTAAACAAGC...TGCAGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR GCA 90 bp | AAAACAATCGCACTACACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTCTTTGGAGTACACAATaGGTTCTTTTCGAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTIALHCGMMLLQIRLVILWSTQ*VLFENF Trigger: GAAATTTTCGAAAAGAACGCATTGTGTACTCCAAAG...AATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTGTAGTGCGATTGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | CATAAGGCCTGGACTCGTCAAGGAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTAGGCGCTGCTGTTCTTaGGAGTACACAATGCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKAWTRQGTERCKLEWRGRRCCS*EYTMRS Trigger: AGAACGCATTGTGTACTCCAAAGAACAGCAGCGCCT...ACCCCTCCACTCCAGCTTACACCTCTCAGTTCCTTGACGAGTCCAGGCCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GAACTGAGAGGTGTAAGCTGGAGTGGAGGGGTTTCTCAGAGTAAGCCAGTCATCCAGATGGACTCTCCATaGTCAGAGGCAACAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: ELRGVSWSGGVSQSKPVIQMDSP*SEATTG Trigger: ACCTGTTGTTGCCTCTGACAATGGAGAGTCCATCTG...GATGACTGGCTTACTCTGAGAAACCCCTCCACTCCAGCTTACACCTCTCAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GTTCCAAGCTGTAACAGGGGCATGGCCATCAAGCAGGTATTCTTGGTATTCTTGAGGCGCTGCTGTTCTTaGGAGTACACAATGCGTTCT | + |
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Preference number: 5 (lower is better) Translates to: VPSCNRGMAIKQVFLVFLRRCCS*EYTMRS Trigger: AGAACGCATTGTGTACTCCAAAGAACAGCAGCGCCT...CAAGAATACCAAGAATACCTGCTTGATGGCCATGCCCCTGTTACAGCTTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGGATTCCTGGCTGCAGTaGAATTTGGGAATGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: GSFSRACLQMDLNCEHPLDSWLQ*NLGMES Trigger: GGATTCCATTCCCAAATTCAACTGCAGCCAGGAATC...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS TCA 90 bp | CTGGCTGCAGTTGAATTTGGGAATGGAATCCTCACCAAATGTGCCTaGACAGATGGACTCTCCATTGTCAGAGGCAACAACAGGTATGGA | + |
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Preference number: 5 (lower is better) Translates to: LAAVEFGNGILTKCA*TDGLSIVRGNNRYG Trigger: TCCATACCTGTTGTTGCCTCTGACAATGGAGAGTCCATCTGTTCAGGCACATTTGGTGAGGATTCCATTCCCAAATTCAACTGCAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGCAGTTCTTGAGGTATTaGGGAACTGATTTCTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFSRACLQMDLNCEHPLQFLRY*GTDFYG Trigger: CCCATAGAAATCAGTTCCCAAATACCTCAAGAACTG...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATCCTCTGCTGTACTTAGCTCGGTaGTTCTTGAACCATTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GSFSRACLQMDLNCEHPLLYLAR*FLNHFL Trigger: CAAGAAATGGTTCAAGAACAACCGAGCTAAGTACAG...CAGAGGATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GTTCCAAGCTGTAACAGGGGCATGGCCATCAAGCAGGTATTCTTGGTATTCTTGGTTCTTTGCCAGTTCTaGAGGTATTTGGGAACTGAT | + |
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Preference number: 5 (lower is better) Translates to: VPSCNRGMAIKQVFLVFLVLCQF*RYLGTD Trigger: ATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAAC...CAAGAATACCAAGAATACCTGCTTGATGGCCATGCCCCTGTTACAGCTTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | AGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGTGGCTGCAGTTGAATTaGGGAATGGAATCCTCACCA | + |
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Preference number: 5 (lower is better) Translates to: SIQGSFSRACLQMDLNCEWLQLN*GMESSP Trigger: TGGTGAGGATTCCATTCCCAAATTCAACTGCAGCCA...CTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | CATGGCCATCAAGCAGGTATTCTTGGTATTCTTGCGGACAACACATGTCCCTATCAGTTCTTGAGGTATTaGGGAACTGATTTCTATGGG | + |
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Preference number: 5 (lower is better) Translates to: HGHQAGILGILADNTCPYQFLRY*GTDFYG Trigger: CCCATAGAAATCAGTTCCCAAATACCTCAAGAACTG...ATAGGGACATGTGTTGTCCGCAAGAATACCAAGAATACCTGCTTGATGGCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | GCCAGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTCAGATGGACTCTCCATaGTCAGAGGCAACAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: ASHLICQKYSRILFQSLSQMDSP*SEATTG Trigger: ACCTGTTGTTGCCTCTGACAATGGAGAGTCCATCTG...AGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS CCA 90 bp | GCTTTAGAGCTTCCATTTGACTCTGGCAGTGCTTGTTTAATATTCTaGAGGTTCATCTGCCTGTACTTAGCTCGGTTGTTCTTGAACCAT | + |
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Preference number: 5 (lower is better) Translates to: ALELPFDSGSACLIF*RFICLYLARLFLNH Trigger: ATGGTTCAAGAACAACCGAGCTAAGTACAGGCAGATGAACCTCCAGAATATTAAACAAGCACTGCCAGAGTCAAATGGAAGCTCTAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | ATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCATGTTCTTTGCCAGTTCTaGAGGTATTTGGGAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IQGSFSRACLQMDLNCEHVLCQF*RYLGTD Trigger: ATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAAC...ATGCTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | AGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCAGATGGACCTGAATTGTGAGCAATTTTCTTCTCCTTaGGGTACTGGCACTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SIQGSFSRACLQMDLNCEQFSSP*GTGTHQ Trigger: TTGATGAGTGCCAGTACCCAAAGGAGAAGAAAATTG...CTCACAATTCAGGTCCATCTGCAGACAAGCTCTGGAAAAGGATCCTTGAATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | ACTACACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTTCTCCAAATACTGGCTGCAGTTGAATTaGGGAATGGAATCCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TTLWYDASTDKTGYFSKYWLQLN*GMESSP Trigger: TGGTGAGGATTCCATTCCCAAATTCAACTGCAGCCA...GTATTTGGAGAAATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTGTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | AAAACAATCGCACTACACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTGATTCCTGGCTGCAGTaGAATTTGGGAATGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: KTIALHCGMMLLQIRLVIDSWLQ*NLGMES Trigger: GGATTCCATTCCCAAATTCAACTGCAGCCAGGAATC...AATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTGTAGTGCGATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | AGTCATCTGATATGTCAAAAGTATTCAAGGATCCTTTTCCAGAGCTTGTCTGCACAATTTTCTTCTCCTTaGGGTACTGGCACTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SHLICQKYSRILFQSLSAQFSSP*GTGTHQ Trigger: TTGATGAGTGCCAGTACCCAAAGGAGAAGAAAATTG...TGCAGACAAGCTCTGGAAAAGGATCCTTGAATACTTTTGACATATCAGATGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | CACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTTCTCCAAATACTGAGCTGTACTTAGCTCGGTaGTTCTTGAACCATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HCGMMLLQIRLVISPNTELYLAR*FLNHFL Trigger: CAAGAAATGGTTCAAGAACAACCGAGCTAAGTACAG...CTCAGTATTTGGAGAAATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS-3UTR CAA 90 bp | AAAACAATCGCACTACACTGTGGTATGATGCTTCTACAGATAAGACTGGTTATTGAAAAGGTAAGTTCTTaGCCAGTTCTTGAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: KTIALHCGMMLLQIRLVIEKVSS*PVLEVF Trigger: AAATACCTCAAGAACTGGCAAAGAACTTACCTTTTC...AATAACCAGTCTTATCTGTAGAAGCATCATACCACAGTGTAGTGCGATTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS CCA 72 bp | TGGGAATGGAATCCTCACCAAATGTGCCTGAACAGATaGACTCTCCATTGTCAGAGGCAACAACAGGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: WEWNPHQMCLNR*TLHCQRQQQVW Trigger: CCATACCTGTTGTTGCCTCTGACAATGGAGAGTCCATCTGTTCAGGCACATTTGGTGAGGATTCCATTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS CAA 72 bp | GTAGGTTCCTTTCAGGGACTGAAAGACTTGATTGCATaGTACTTCCTGGGGTCACTAGGGGACTCTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: VGSFQGLKDLIA*YFLGSLGDSDS Trigger: TGAGTCAGAGTCCCCTAGTGACCCCAGGAAGTACAATGCAATCAAGTCTTTCAGTCCCTGAAAGGAACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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| CDS CAA 72 bp | CTTGCTGAAGTAGGTTCCTTTCAGGGACTGAAAGACTaGATTGCATTGTACTTCCTGGGGTCACTAGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LAEVGSFQGLKD*IALYFLGSLGD Trigger: GTCCCCTAGTGACCCCAGGAAGTACAATGCAATCAAGTCTTTCAGTCCCTGAAAGGAACCTACTTCAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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| CDS CAA 90 bp | CTTCAGACTCTTGCTGAAGTAGGTTCCTTTCAGGGACTGAAAGACTaGATTGCATTGTACTTCCTGGGGTCACTAGGGGACTCTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQTLAEVGSFQGLKD*IALYFLGSLGDSDS Trigger: TGAGTCAGAGTCCCCTAGTGACCCCAGGAAGTACAATGCAATCAAGTCTTTCAGTCCCTGAAAGGAACCTACTTCAGCAAGAGTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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| CDS TCA 72 bp | GTTGAATTTGGGAATGGAATCCTCACCAAATGTGCCTaGACAGATGGACTCTCCATTGTCAGAGGCAACAAC | + |
|
Preference number: 6 (lower is better) Translates to: VEFGNGILTKCA*TDGLSIVRGNN Trigger: GTTGTTGCCTCTGACAATGGAGAGTCCATCTGTTCAGGCACATTTGGTGAGGATTCCATTCCCAAATTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS GCA 72 bp | TTCTCCTTTGGGTACTGGCACTCATCAAAATGTTTTTaGAGCAGGCGCTGCTGTTCTTTGGAGTACACAATG | + |
|
Preference number: 6 (lower is better) Translates to: FSFGYWHSSKCF*SRRCCSLEYTM Trigger: CATTGTGTACTCCAAAGAACAGCAGCGCCTGCTGCAAAAACATTTTGATGAGTGCCAGTACCCAAAGGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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| CDS CCA 72 bp | CTTCCATTTGACTCTGGCAGTGCTTGTTTAATATTCTaGAGGTTCATCTGCCTGTACTTAGCTCGGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LPFDSGSACLIF*RFICLYLARLF Trigger: GAACAACCGAGCTAAGTACAGGCAGATGAACCTCCAGAATATTAAACAAGCACTGCCAGAGTCAAATGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS GCA 72 bp | TCTGGCAGTGCTTGTTTAATATTCTGGAGGTTCATCTaGCTGTACTTAGCTCGGTTGTTCTTGAACCATTTC | + |
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Preference number: 6 (lower is better) Translates to: SGSACLIFWRFI*LYLARLFLNHF Trigger: GAAATGGTTCAAGAACAACCGAGCTAAGTACAGGCAGATGAACCTCCAGAATATTAAACAAGCACTGCCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS CAA 72 bp | CATATTTATCTGACAGTGGCATACAACCTGATTGTCTaGATGGTCCTTCAGACTCTTGCTGAAGTAGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HIYLTVAYNLIV*MVLQTLAEVGS Trigger: GGAACCTACTTCAGCAAGAGTCTGAAGGACCATCAAGACAATCAGGTTGTATGCCACTGTCAGATAAATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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| CDS CAA 72 bp | TGGAGGTTCATCTGCCTGTACTTAGCTCGGTTGTTCTaGAACCATTTCTTGATCTCCATCTTTGTAACACCA | + |
|
Preference number: 6 (lower is better) Translates to: WRFICLYLARLF*NHFLISIFVTP Trigger: TGGTGTTACAAAGATGGAGATCAAGAAATGGTTCAAGAACAACCGAGCTAAGTACAGGCAGATGAACCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS CAA 72 bp | TGCCTGTACTTAGCTCGGTTGTTCTTGAACCATTTCTaGATCTCCATCTTTGTAACACCAATCAATACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CLYLARLFLNHF*ISIFVTPINTA Trigger: GGCTGTATTGATTGGTGTTACAAAGATGGAGATCAAGAAATGGTTCAAGAACAACCGAGCTAAGTACAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS TCA 72 bp | GTAAGTTCTTTGCCAGTTCTTGAGGTATTTGGGAACTaGTTTCTATGGGTATATTCGAAGCCACTTGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSSLPVLEVFGN*FLWVYSKPLEV Trigger: AACTTCAAGTGGCTTCGAATATACCCATAGAAATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAACTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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| CDS CAA 90 bp | TTAATATTCTGGAGGTTCATCTGCCTGTACTTAGCTCGGTTGTTCTaGAACCATTTCTTGATCTCCATCTTTGTAACACCAATCAATACA | + |
|
Preference number: 6 (lower is better) Translates to: LIFWRFICLYLARLF*NHFLISIFVTPINT Trigger: TGTATTGATTGGTGTTACAAAGATGGAGATCAAGAAATGGTTCAAGAACAACCGAGCTAAGTACAGGCAGATGAACCTCCAGAATATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069740.14 ENSMUST00000183788.8 |
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| CDS CAA 72 bp | TTTCGAAAATTTCTTGAAGCCAAAAGGCCAGTTTGTTaGTTTACATATTTATCTGACAGTGGCATACAACCT | + |
|
Preference number: 6 (lower is better) Translates to: FRKFLEAKRPVC*FTYLSDSGIQP Trigger: AGGTTGTATGCCACTGTCAGATAAATATGTAAACAAACAAACTGGCCTTTTGGCTTCAAGAAATTTTCGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069740.14 ENSMUST00000183424.2 ENSMUST00000183788.8 |
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