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Pregenerated sensors for OBOX6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041583

Ensembl transcript IDs: ENSMUST00000108513.5

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GCTTCAGAGCTTCCATTTGTCTCTGGCAGTGCTGCTGGAACATTCTaGAGACTCTCCCGCTTGGACTTAGCCCGGTGGTTCTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: ASELPFVSGSAAGTF*RLSRLDLARWFLNQ
Trigger: CTGGTTCAAGAACCACCGGGCTAAGTCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAGCTCTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 90 bp GCTGCTGGAACATTCTGGAGACTCTCCCGCTTGGACTTAGCCCGGTaGTTCTTGAACCAGATCTGGATCTCATTTGCTGTGACACCAACC +
Preference number: 5 (lower is better)
Translates to: AAGTFWRLSRLDLAR*FLNQIWISFAVTPT
Trigger: GGTTGGTGTCACAGCAAATGAGATCCAGATCTGGTTCAAGAACCACCGGGCTAAGTCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 90 bp CTCAGAAACAGCTTCAGAGCTTCCATTTGTCTCTGGCAGTGCTGCTaGAACATTCTGGAGACTCTCCCGCTTGGACTTAGCCCGGTGGTT +
Preference number: 5 (lower is better)
Translates to: LRNSFRASICLWQCC*NILETLPLGLSPVV
Trigger: AACCACCGGGCTAAGTCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAGCTCTGAAGCTGTTTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS TCA 90 bp GCTTCAGCTACTGCTAAGCCAGTCTGGACTTCAACTGCTACTGATTaGCCAGAGTTCCAAGCTGTAACAGGGGCATGGCCATTAAGCAGG +
Preference number: 5 (lower is better)
Translates to: ASATAKPVWTSTATD*PEFQAVTGAWPLSR
Trigger: CCTGCTTAATGGCCATGCCCCTGTTACAGCTTGGAACTCTGGTCAATCAGTAGCAGTTGAAGTCCAGACTGGCTTAGCAGTAGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS GCA 90 bp CTTGAACCAGATCTGGATCTCATTTGCTGTGACACCAACCAAAACTaGCAGTGCCATGCGTTGCTCCCGGCTTGGGTATGTGCACTTATG +
Preference number: 5 (lower is better)
Translates to: LEPDLDLICCDTNQN*QCHALLPAWVCALM
Trigger: CATAAGTGCACATACCCAAGCCGGGAGCAACGCATGGCACTGGCAGTTTTGGTTGGTGTCACAGCAAATGAGATCCAGATCTGGTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 90 bp GACTCTCCATTGGCAGAAGCAACAACGGGTAAGGAATCAGGAAAGTaGACTGACTCAGAAACAGCTTCAGAGCTTCCATTTGTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DSPLAEATTGKESGK*TDSETASELPFVSG
Trigger: GCCAGAGACAAATGGAAGCTCTGAAGCTGTTTCTGAGTCAGTCCACTTTCCTGATTCCTTACCCGTTGTTGCTTCTGCCAATGGAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 90 bp GAATGGAATCCTCACCAAATGTGCCTGACCACATGGACTCTCCATTaGCAGAAGCAACAACGGGTAAGGAATCAGGAAAGTGGACTGACT +
Preference number: 5 (lower is better)
Translates to: EWNPHQMCLTTWTLH*QKQQRVRNQESGLT
Trigger: AGTCAGTCCACTTTCCTGATTCCTTACCCGTTGTTGCTTCTGCCAATGGAGAGTCCATGTGGTCAGGCACATTTGGTGAGGATTCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS TCA 90 bp TTTGGAAAGGCAAATTCCTTGCAGGTTCTTGATGCATTTGAAAACTaGTTTCTATGGGTGCACTTGAAGACATTTGGAATTTTGAATGCA +
Preference number: 5 (lower is better)
Translates to: FGKANSLQVLDAFEN*FLWVHLKTFGILNA
Trigger: TGCATTCAAAATTCCAAATGTCTTCAAGTGCACCCATAGAAATCAGTTTTCAAATGCATCAAGAACCTGCAAGGAATTTGCCTTTCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 72 bp CTTCCATTTGTCTCTGGCAGTGCTGCTGGAACATTCTaGAGACTCTCCCGCTTGGACTTAGCCCGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: LPFVSGSAAGTF*RLSRLDLARWF
Trigger: GAACCACCGGGCTAAGTCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS GCA 72 bp GATCTGGATCTCATTTGCTGTGACACCAACCAAAACTaGCAGTGCCATGCGTTGCTCCCGGCTTGGGTATGT +
Preference number: 6 (lower is better)
Translates to: DLDLICCDTNQN*QCHALLPAWVC
Trigger: ACATACCCAAGCCGGGAGCAACGCATGGCACTGGCAGTTTTGGTTGGTGTCACAGCAAATGAGATCCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 72 bp AGCTTCAGAGCTTCCATTTGTCTCTGGCAGTGCTGCTaGAACATTCTGGAGACTCTCCCGCTTGGACTTAGC +
Preference number: 6 (lower is better)
Translates to: SFRASICLWQCC*NILETLPLGLS
Trigger: GCTAAGTCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAGCTCTGAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS GCA 72 bp AACAGCTTCAGAGCTTCCATTTGTCTCTGGCAGTGCTaGTGGAACATTCTGGAGACTCTCCCGCTTGGACTT +
Preference number: 6 (lower is better)
Translates to: NSFRASICLWQC*WNILETLPLGL
Trigger: AAGTCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAGCTCTGAAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS GCA 72 bp AGAAACAGCTTCAGAGCTTCCATTTGTCTCTGGCAGTaGTGCTGGAACATTCTGGAGACTCTCCCGCTTGGA +
Preference number: 6 (lower is better)
Translates to: RNSFRASICLWQ*CWNILETLPLG
Trigger: TCCAAGCGGGAGAGTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAGCTCTGAAGCTGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 72 bp TGGGAATGGAATCCTCACCAAATGTGCCTGACCACATaGACTCTCCATTGGCAGAAGCAACAACGGGTAAGG +
Preference number: 6 (lower is better)
Translates to: WEWNPHQMCLTT*TLHWQKQQRVR
Trigger: CCTTACCCGTTGTTGCTTCTGCCAATGGAGAGTCCATGTGGTCAGGCACATTTGGTGAGGATTCCATTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CAA 90 bp GGAATGGAATCCTCACCAAATGTGCCTGACCACATGGACTCTCCATaGGCAGAAGCAACAACGGGTAAGGAATCAGGAAAGTGGACTGAC +
Preference number: 6 (lower is better)
Translates to: GMESSPNVPDHMDSP*AEATTGKESGKWTD
Trigger: GTCAGTCCACTTTCCTGATTCCTTACCCGTTGTTGCTTCTGCCAATGGAGAGTCCATGTGGTCAGGCACATTTGGTGAGGATTCCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS TCA 72 bp GTTGAGGTTGGGAATGGAATCCTCACCAAATGTGCCTaGCCACATGGACTCTCCATTGGCAGAAGCAACAAC +
Preference number: 6 (lower is better)
Translates to: VEVGNGILTKCA*PHGLSIGRSNN
Trigger: GTTGTTGCTTCTGCCAATGGAGAGTCCATGTGGTCAGGCACATTTGGTGAGGATTCCATTCCCAACCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 72 bp CCTCACCAAATGTGCCTGACCACATGGACTCTCCATTaGCAGAAGCAACAACGGGTAAGGAATCAGGAAAGT +
Preference number: 6 (lower is better)
Translates to: PHQMCLTTWTLH*QKQQRVRNQES
Trigger: ACTTTCCTGATTCCTTACCCGTTGTTGCTTCTGCCAATGGAGAGTCCATGTGGTCAGGCACATTTGGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CAA 72 bp AGTGGACTGACTCAGAAACAGCTTCAGAGCTTCCATTaGTCTCTGGCAGTGCTGCTGGAACATTCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: SGLTQKQLQSFH*SLAVLLEHSGD
Trigger: GTCTCCAGAATGTTCCAGCAGCACTGCCAGAGACAAATGGAAGCTCTGAAGCTGTTTCTGAGTCAGTCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CAA 72 bp TCCTCACCAAATGTGCCTGACCACATGGACTCTCCATaGGCAGAAGCAACAACGGGTAAGGAATCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: SSPNVPDHMDSP*AEATTGKESGK
Trigger: CTTTCCTGATTCCTTACCCGTTGTTGCTTCTGCCAATGGAGAGTCCATGTGGTCAGGCACATTTGGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 72 bp GGTTGCATTTGTATACTTGATTTTCCTGATGGACCTTaGGACTCTTGCGGACATAGGTCCCTTTCAGGGACT +
Preference number: 6 (lower is better)
Translates to: GCICILDFPDGP*DSCGHRSLSGT
Trigger: AGTCCCTGAAAGGGACCTATGTCCGCAAGAGTCCCAAGGTCCATCAGGAAAATCAAGTATACAAATGCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CAA 90 bp ATAGGTCCCTTTCAGGGACTGAATGACTTGATTGCATTGGACTTCTaGGGATCACTAGAGGACTCTGGCACATTTGGAAAGGCAAATTCC +
Preference number: 6 (lower is better)
Translates to: IGPFQGLNDLIALDF*GSLEDSGTFGKANS
Trigger: GGAATTTGCCTTTCCAAATGTGCCAGAGTCCTCTAGTGATCCCAAGAAGTCCAATGCAATCAAGTCATTCAGTCCCTGAAAGGGACCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CCA 72 bp TTGGCAGAAGCAACAACGGGTAAGGAATCAGGAAAGTaGACTGACTCAGAAACAGCTTCAGAGCTTCCATTT +
Preference number: 6 (lower is better)
Translates to: LAEATTGKESGK*TDSETASELPF
Trigger: AAATGGAAGCTCTGAAGCTGTTTCTGAGTCAGTCCACTTTCCTGATTCCTTACCCGTTGTTGCTTCTGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CAA 72 bp TTTCAGGGACTGAATGACTTGATTGCATTGGACTTCTaGGGATCACTAGAGGACTCTGGCACATTTGGAAAG +
Preference number: 6 (lower is better)
Translates to: FQGLNDLIALDF*GSLEDSGTFGK
Trigger: CTTTCCAAATGTGCCAGAGTCCTCTAGTGATCCCAAGAAGTCCAATGCAATCAAGTCATTCAGTCCCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5
CDS CAA 72 bp CTGGCACATTTGGAAAGGCAAATTCCTTGCAGGTTCTaGATGCATTTGAAAACTGATTTCTATGGGTGCACT +
Preference number: 6 (lower is better)
Translates to: LAHLERQIPCRF*MHLKTDFYGCT
Trigger: AGTGCACCCATAGAAATCAGTTTTCAAATGCATCAAGAACCTGCAAGGAATTTGCCTTTCCAAATGTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108513.5