Pregenerated sensors for OBOX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066772Ensembl transcript IDs: ENSMUST00000086122.10, ENSMUST00000095217.11, ENSMUST00000173395.8, ENSMUST00000173912.8, ENSMUST00000174151.8, ENSMUST00000174443.8, ENSMUST00000174842.2
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACACTCATTaGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: TNGLRIMCSQSDYTH*SCKLYLPQYRGMPG Trigger: CCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| 3UTR GCA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTaGATGAATCCACAGCCACCCCAAATATATACTAAACAAAGTATC | + |
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Preference number: 1 (lower is better) Translates to: GNHITGVRLDSESLY*MNPQPPQIYTKQSI Trigger: GATACTTTGTTTAGTATATATTTGGGGTGGCTGTGGATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| 3UTR GCA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTaGATGAATCCACAGCCACCCCAAATATATACTAAACAAAGTATC | + |
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Preference number: 1 (lower is better) Translates to: GNHITGVRLDSESLY*MNPQPPQIYTKQSI Trigger: GATACTTTGTTTAGTATATATTTGGGGTGGCTGTGGATTCATGCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| 3UTR TCA 90 bp | CCCAAATATATACTAAACAAAGTATCATTTTCTACTAATGGACTCTaGATTATGTGCTCTCAAAGTGATTACGCCCATTGGTCGTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: PKYILNKVSFSTNGL*IMCSQSDYAHWSCK Trigger: TTTGCACGACCAATGGGCGTAATCACTTTGAGAGCACATAATTCAGAGTCCATTAGTAGAAAATGATACTTTGTTTAGTATATATTTGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTCTACTAATGGACTCTaGATTATGTGCTCTCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: EGIGNHITGVRLDSESLYSTNGL*IMCSQS Trigger: ACTTTGAGAGCACATAATTCAGAGTCCATTAGTAGA...ATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| 3UTR GCA 72 bp | AAAGTGATTACGCCCATTGGTCGTGCAAACTTTATCTaGCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: KVITPIGRANFI*LSTGECQGQEV Trigger: CACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCGTAATCACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| 3UTR GCA 72 bp | AAAGTGATTACACTCATTGGTCGTGCAAACTTTATCTaGCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: KVITLIGRANFI*LSTGECQGQEV Trigger: CACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| 3UTR CCA 72 bp | CTCCGAATTATGTGCTCTCAAAGTGATTACACTCATTaGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LRIMCSQSDYTH*SCKLYLPQYRG Trigger: TCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGAGCACATAATTCGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| 3UTR GCA 72 bp | ATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTaGATGAATCCACAGCCACCCCAAATATATACTAAA | + |
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Preference number: 3 (lower is better) Translates to: ITGVRLDSESLY*MNPQPPQIYTK Trigger: TTTAGTATATATTTGGGGTGGCTGTGGATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| 3UTR GCA 72 bp | ATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTaGATGAATCCACAGCCACCCCAAATATATACTAAA | + |
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Preference number: 3 (lower is better) Translates to: ITGVRLDSESLY*MNPQPPQIYTK Trigger: TTTAGTATATATTTGGGGTGGCTGTGGATTCATGCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| 3UTR GCA 72 bp | AAAGTATCATTTTCTACCAATGGACTCCGAATTATGTaGTCTCAAAGTGATTACACTCATTGGTCGTGCAAA | + |
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Preference number: 3 (lower is better) Translates to: KVSFSTNGLRIM*SQSDYTHWSCK Trigger: TTTGCACGACCAATGAGTGTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| 3UTR TCA 72 bp | ATACTAAACAAAGTATCATTTTCTACTAATGGACTCTaGATTATGTGCTCTCAAAGTGATTACGCCCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: ILNKVSFSTNGL*IMCSQSDYAHW Trigger: CCAATGGGCGTAATCACTTTGAGAGCACATAATTCAGAGTCCATTAGTAGAAAATGATACTTTGTTTAGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CCA 90 bp | CGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGCATCCTCTGGGGCTTaGGCGGCATATGCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: RANFICLSTGECQGQEVGASSGA*AAYARP Trigger: CGGCCTGGCATATGCCGCCCAAGCCCCAGAGGATGC...TCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGCATGGACCTGAATTGTaGGCATCCTCTGGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGHGPEL*ASSGAW Trigger: CCAAGCCCCAGAGGATGCTCACAATTCAGGTCCATG...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGCCACTTGGAGTTTTaGATGCAAGGAGGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGSHLEF*MQGGAF Trigger: GAAGGCCCCTCCTTGCATCCAAAACTCCAAGTGGCT...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGCTCACCAAATGTGCCTaGACACATGGACTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGLTKCA*THGLSI Trigger: AATGGAGAGTCCATGTGTTCAGGCACATTTGGTGAG...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | AACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAAGGGAATGCAGGGAAGATTCCTaGCTGCAGTTGAGTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: NFICLSTGECQGQEVGRECREDS*LQLSLG Trigger: TCCCAAACTCAACTGCAGCCAGGAATCTTCCCTGCA...TTCCCTTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGTAAGCCAGTCATCTaGTGTGTCCAAGTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGSKPVI*CVQVFK Trigger: CTTGAAGACTTGGACACATCAGATGACTGGCTTACT...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGGAGGTATTTGGGAACTaGGTTCTATGGGTATATTCG | + |
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Preference number: 4 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGEVFGN*VLWVYS Trigger: CGAATATACCCATAGAACTCAGTTCCCAAATACCTC...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | CGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAATATTCGAAGCCACTTaGAGTTTTGGATGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RANFICLSTGECQGQEVGIFEAT*SFGCKE Trigger: CTCCTTGCATCCAAAACTCCAAGTGGCTTCGAATAT...TCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR GCA 90 bp | GGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCACTTGGAGTTTTGGATaGAAGGAGGGGCCTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GVGNHITGVRLDSESLYCTWSFG*KEGPSA Trigger: GGCCGAAGGCCCCTCCTTGCATCCAAAACTCCAAGT...GCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGTGATTACGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGTGCAGGGAAGATTCCTaGCTGCAGTTGAGTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SQSDYAHWSCKLYLPQYRCREDS*LQLSLG Trigger: TCCCAAACTCAACTGCAGCCAGGAATCTTCCCTGCA...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCGTAATCACTTTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CCA 90 bp | GGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCAGCCACTTGGAGTTTTaGATGCAAGGAGGGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GVGNHITGVRLDSESLYCSHLEF*MQGGAF Trigger: GAAGGCCCCTCCTTGCATCCAAAACTCCAAGTGGCT...GCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | TCTCAAAGTGATTACGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGCACTGCTGTTCTTTaGAGTACACAGTGCGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SQSDYAHWSCKLYLPQYRGTAVL*STQCVL Trigger: AAGAACGCACTGTGTACTCCAAAGAACAGCAGTGCC...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCGTAATCACTTTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CCA 90 bp | GCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAAGGTATTCTTGGTATTCTTaGTATTCTTGCGGACAACAC | + |
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Preference number: 4 (lower is better) Translates to: ANFICLSTGECQGQEVGRYSWYS*YSCGQH Trigger: GTGTTGTCCGCAAGAATACCAAGAATACCAAGAATA...CCTTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR GCA 90 bp | GGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTGCACTTGGAGTTTTGGATaGAAGGAGGGGCCTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GIGNHITGVRLDSESLYCTWSFG*KEGPSA Trigger: GGCCGAAGGCCCCTCCTTGCATCCAAAACTCCAAGT...GCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR TCA 90 bp | TCTCAAAGTGATTACACTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGCTCACCAAATGTGCCTaGACACATGGACTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: SQSDYTHWSCKLYLPQYRLTKCA*THGLSI Trigger: AATGGAGAGTCCATGTGTTCAGGCACATTTGGTGAG...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTAGCTTGTTTTATATTCTaGAGCTTCATCCGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GEGVGNHITGVRLDSESLACFIF*SFIRLY Trigger: GTACAGGCGGATGAAGCTCCAGAATATAAAACAAGC...TAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTAAGTCAACAACAGGTATaGAACCAGGAAAATGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GEGVGNHITGVRLDSESLSQQQV*NQENGL Trigger: CAACCCATTTTCCTGGTTCCATACCTGTTGTTGACT...TAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | GATTACACTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAACTGCTAAGTCAGTTTaGGATTCAAATGCTGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: DYTHWSCKLYLPQYRGMPTAKSV*DSNAAD Trigger: ATCAGCAGCATTTGAATCTCAAACTGACTTAGCAGT...TGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATCATGGACCTGAATTGTaGGCATCCTCTGGGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNHGPEL*ASSGAW Trigger: CCAAGCCCCAGAGGATGCTCACAATTCAGGTCCATG...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR GCA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATACTTGGAGTTTTGGATaGAAGGAGGGGCCTTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNTWSFG*KEGPSA Trigger: GGCCGAAGGCCCCTCCTTGCATCCAAAACTCCAAGT...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | AAGCAAGGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGATATTCGAAGCCACTTaGAGTTTTGGATGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KQGEGVGNHITGVRLDSEIFEAT*SFGCKE Trigger: CTCCTTGCATCCAAAACTCCAAGTGGCTTCGAATAT...CTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGACTGCTAAGTCAGTTTaGGATTCAAATGCTGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: KQGEGVGNHITGVRLDSETAKSV*DSNAAD Trigger: ATCAGCAGCATTTGAATCTCAAACTGACTTAGCAGT...CTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCCTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGAGTAAGCCAGTCATCTaGTGTGTCCAAGTCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: KQGEGIGNHITGVRLDSESKPVI*CVQVFK Trigger: CTTGAAGACTTGGACACATCAGATGACTGGCTTACT...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CCA 90 bp | GGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTAGCTTGTTTTATATTCTaGAGCTTCATCCGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GEGIGNHITGVRLDSESLACFIF*SFIRLY Trigger: GTACAGGCGGATGAAGCTCCAGAATATAAAACAAGC...TAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CCA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCATGAATTGCAGGGAAGATTCCTaGCTGCAGTTGAGTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GNHITGVRLDSESLYCMNCREDS*LQLSLG Trigger: TCCCAAACTCAACTGCAGCCAGGAATCTTCCCTGCA...ATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | TGTGCTCTCAAAGTGATTACGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTTATTCTTGGTATTCTTaGTATTCTTGCGGACAACAC | + |
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Preference number: 4 (lower is better) Translates to: CALKVITPIGRANFICLSYSWYS*YSCGQH Trigger: GTGTTGTCCGCAAGAATACCAAGAATACCAAGAATA...ACTGAGGCAGATAAAGTTTGCACGACCAATGGGCGTAATCACTTTGAGAGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGGAGGTATTTGGGAACTaGGTTCTATGGGTATATTCG | + |
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Preference number: 4 (lower is better) Translates to: KQGEGIGNHITGVRLDSEEVFGN*VLWVYS Trigger: CGAATATACCCATAGAACTCAGTTCCCAAATACCTC...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR GCA 90 bp | GGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTAACTGAAAGTCTTGATTaGATTGTACTTCCTGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GEGIGNHITGVRLDSESLTESLD*IVLPGV Trigger: GACTCCAGGAAGTACAATGCAATCAAGACTTTCAGT...TAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR GCA 90 bp | TCTCAAAGTGATTACACTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGTCATCAAAATGTTTTTaGAGCAGGCACTGCTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SQSDYTHWSCKLYLPQYRSSKCF*SRHCCS Trigger: AGAACAGCAGTGCCTGCTGCAAAAACATTTTGATGA...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR GCA 90 bp | GGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTGCAATCCTCACCAAATGTaGCTGAACACATGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: GIGNHITGVRLDSESLYCNPHQM*LNTWTL Trigger: GAGAGTCCATGTGTTCAGGCACATTTGGTGAGGATT...GCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CCA 90 bp | GGAGTTAGACTTGATAGTGAGTCCCTATATTGCATGAATCCACAGCCACCCCAAGCTTTCATTTGTCTCTaGCAGTGCTTGTTTTATATT | + |
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Preference number: 4 (lower is better) Translates to: GVRLDSESLYCMNPQPPQAFICL*QCLFYI Trigger: AATATAAAACAAGCACTGCCAGAGACAAATGAAAGC...TTGGGGTGGCTGTGGATTCATGCAATATAGGGACTCACTATCAAGTCTAACTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR TCA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGACTGCTAAGTCAGTTTaGGATTCAAATGCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQGEGIGNHITGVRLDSETAKSV*DSNAAD Trigger: ATCAGCAGCATTTGAATCTCAAACTGACTTAGCAGT...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR GCA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCATCAAAATGTTTTTaGAGCAGGCACTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQGEGIGNHITGVRLDSESSKCF*SRHCCS Trigger: AGAACAGCAGTGCCTGCTGCAAAAACATTTTGATGA...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAAAGTGATTACACTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGATTTGTCTCTGGCAGTaGTTGTTTTATATTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQSDYTHWSCKLYLPQYRICLWQ*LFYILE Trigger: CTCCAGAATATAAAACAAGCACTGCCAGAGACAAAT...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR GCA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCATGAATAATCCTCACCAAATGTaGCTGAACACATGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNHITGVRLDSESLYCMNNPHQM*LNTWTL Trigger: GAGAGTCCATGTGTTCAGGCACATTTGGTGAGGATT...ATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CCA 90 bp | GGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTGCAGTCAACAACAGGTATaGAACCAGGAAAATGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GIGNHITGVRLDSESLYCSQQQV*NQENGL Trigger: CAACCCATTTTCCTGGTTCCATACCTGTTGTTGACT...GCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR TCA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCATGAATGAGGTATTTGGGAACTaGGTTCTATGGGTATATTCG | + |
|
Preference number: 4 (lower is better) Translates to: GNHITGVRLDSESLYCMNEVFGN*VLWVYS Trigger: CGAATATACCCATAGAACTCAGTTCCCAAATACCTC...ATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTATCATTTTCTACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACAGTAAGCCAGTCATCTaGTGTGTCCAAGTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSFSTNGLRIMCSQSDYSKPVI*CVQVFK Trigger: CTTGAAGACTTGGACACATCAGATGACTGGCTTACT...GTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR GCA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGATTTGTCTCTGGCAGTaGTTGTTTTATATTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQGEGIGNHITGVRLDSEICLWQ*LFYILE Trigger: CTCCAGAATATAAAACAAGCACTGCCAGAGACAAAT...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR CCA 90 bp | TCTCAAAGTGATTACACTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGGCTTTCATTTGTCTCTaGCAGTGCTTGTTTTATATT | + |
|
Preference number: 4 (lower is better) Translates to: SQSDYTHWSCKLYLPQYRAFICL*QCLFYI Trigger: AATATAAAACAAGCACTGCCAGAGACAAATGAAAGC...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATGCTTGTTTTATATTCTaGAGCTTCATCCGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNACFIF*SFIRLY Trigger: GTACAGGCGGATGAAGCTCCAGAATATAAAACAAGC...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATAGTCAACAACAGGTATaGAACCAGGAAAATGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNSQQQV*NQENGL Trigger: CAACCCATTTTCCTGGTTCCATACCTGTTGTTGACT...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTATCATTTTCTACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACACTGAAAGTCTTGATTaGATTGTACTTCCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSFSTNGLRIMCSQSDYTESLD*IVLPGV Trigger: GACTCCAGGAAGTACAATGCAATCAAGACTTTCAGT...GTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR GCA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATTCATCAAAATGTTTTTaGAGCAGGCACTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNSSKCF*SRHCCS Trigger: AGAACAGCAGTGCCTGCTGCAAAAACATTTTGATGA...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR GCA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATATTTGTCTCTGGCAGTaGTTGTTTTATATTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNICLWQ*LFYILE Trigger: CTCCAGAATATAAAACAAGCACTGCCAGAGACAAAT...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CCA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCATGAATGCTTTCATTTGTCTCTaGCAGTGCTTGTTTTATATT | + |
|
Preference number: 4 (lower is better) Translates to: GNHITGVRLDSESLYCMNAFICL*QCLFYI Trigger: AATATAAAACAAGCACTGCCAGAGACAAATGAAAGC...ATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CCA 90 bp | AAAGTATCATTTTCTACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACTATTCTTGGTATTCTTaGTATTCTTGCGGACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSFSTNGLRIMCSQSDYYSWYS*YSCGQH Trigger: GTGTTGTCCGCAAGAATACCAAGAATACCAAGAATA...GTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | CGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAAGGCACTGCTGTTCTTaGGAGTACACAGTGCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RANFICLSTGECQGQEVGRHCCS*EYTVRS Trigger: AGAACGCACTGTGTACTCCAAAGAACAGCAGTGCCT...TCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | AACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAAGGGAAAGGCACTGCTGTTCTTaGGAGTACACAGTGCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NFICLSTGECQGQEVGRERHCCS*EYTVRS Trigger: AGAACGCACTGTGTACTCCAAAGAACAGCAGTGCCT...TTCCCTTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | AACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAAGGGAAGATTCCTGGCTGCAGTaGAGTTTGGGAATGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: NFICLSTGECQGQEVGREDSWLQ*SLGMES Trigger: GGATTCCATTCCCAAACTCAACTGCAGCCAGGAATC...TTCCCTTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGCAGGGACTGAAAGTCTaGATTGCATTGTACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGQGLKV*IALYFL Trigger: CAGGAAGTACAATGCAATCAAGACTTTCAGTCCCTG...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGCTCATCAAAATGTTTTaGCAGCAGGCACTGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGLIKMF*QQALLF Trigger: GAACAGCAGTGCCTGCTGCAAAAACATTTTGATGAG...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS TCA 90 bp | CTGGCTGCAGTTGAGTTTGGGAATGGAATCCTCACCAAATGTGCCTaGACACATGGACTCTCCATTGTCCGAGTCAACAACAGGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAAVEFGNGILTKCA*THGLSIVRVNNRYG Trigger: TCCATACCTGTTGTTGACTCGGACAATGGAGAGTCCATGTGTTCAGGCACATTTGGTGAGGATTCCATTCCCAAACTCAACTGCAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS TCA 90 bp | CATCACAGGCCTGAAAACAATGCAGGGAAGATTCCTGGCTGCAGTTaGGTTTGGGAATGGAATCCTCACCAAATGTGCCTGAACACATGG | + |
|
Preference number: 5 (lower is better) Translates to: HHRPENNAGKIPGCS*VWEWNPHQMCLNTW Trigger: CCATGTGTTCAGGCACATTTGGTGAGGATTCCATTCCCAAACTCAACTGCAGCCAGGAATCTTCCCTGCATTGTTTTCAGGCCTGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | CGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAGAAAAGCTAAGTTCCTaGCAGGGTCTTGAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: RANFICLSTGECQGQEVGEKLSS*QGLEVF Trigger: AAATACCTCAAGACCCTGCAAGGAACTTAGCTTTTC...TCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGGAAAAGCTAAGTTCCTaGCAGGGTCTTGAGGTATTT | + |
|
Preference number: 5 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGEKLSS*QGLEVF Trigger: AAATACCTCAAGACCCTGCAAGGAACTTAGCTTTTC...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGAAGGTGTCTCTGGCAGTGCTaGTTTTATATTCTGGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ANFICLSTGECQGQEVGRCLWQC*FYILEL Trigger: AAGCTCCAGAATATAAAACAAGCACTGCCAGAGACA...CCTTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS TCA 90 bp | TATTCTTGGTATTCTTGCGGACAACACATGTCCCCATCACAGGCCTaGAAACAATGCAGGGAAGATTCCTGGCTGCAGTTGAGTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: YSWYSCGQHMSPSQA*KQCREDSWLQLSLG Trigger: TCCCAAACTCAACTGCAGCCAGGAATCTTCCCTGCATTGTTTTCAGGCCTGTGATGGGGACATGTGTTGTCCGCAAGAATACCAAGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTAAGGCACTGCTGTTCTTaGGAGTACACAGTGCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEGVGNHITGVRLDSESLRHCCS*EYTVRS Trigger: AGAACGCACTGTGTACTCCAAAGAACAGCAGTGCCT...TAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | CGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGATTCTTGAACCAGATCTaGATCTCCCTCTTTGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: RANFICLSTGECQGQEVGFLNQI*ISLFVT Trigger: TGTTACAAAGAGGGAGATCAAGATCTGGTTCAAGAA...TCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | TCGTGCAAACTTTATCTGCCTCAGTACAGGGGAATGCCAGGGCCAAGAAGTGGGTTCTTGAACCAGATCTaGATCTCCCTCTTTGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: SCKLYLPQYRGMPGPRSGFLNQI*ISLFVT Trigger: TGTTACAAAGAGGGAGATCAAGATCTGGTTCAAGAA...CCCACTTCTTGGCCCTGGCATTCCCCTGTACTGAGGCAGATAAAGTTTGCACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | TCTCAAAGTGATTACGCCCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGCAGGGACTGAAAGTCTaGATTGCATTGTACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSDYAHWSCKLYLPQYRQGLKV*IALYFL Trigger: CAGGAAGTACAATGCAATCAAGACTTTCAGTCCCTG...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGGGCGTAATCACTTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTACTCATCAAAATGTTTTaGCAGCAGGCACTGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GEGVGNHITGVRLDSESLLIKMF*QQALLF Trigger: GAACAGCAGTGCCTGCTGCAAAAACATTTTGATGAG...TAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTACTGTACTTAGCTCGGTaGTTCTTGAACCAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEGVGNHITGVRLDSESLLYLAR*FLNQIL Trigger: CAAGATCTGGTTCAAGAACAACCGAGCTAAGTACAG...TAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS CCA 90 bp | GCTTTAGAGCTTTCATTTGTCTCTGGCAGTGCTTGTTTTATATTCTaGAGCTTCATCCGCCTGTACTTAGCTCGGTTGTTCTTGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALELSFVSGSACFIF*SFIRLYLARLFLNQ Trigger: CTGGTTCAAGAACAACCGAGCTAAGTACAGGCGGATGAAGCTCCAGAATATAAAACAAGCACTGCCAGAGACAAATGAAAGCTCTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGGATTCCTGGCTGCAGTaGAGTTTGGGAATGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: KQGEGIGNHITGVRLDSEDSWLQ*SLGMES Trigger: GGATTCCATTCCCAAACTCAACTGCAGCCAGGAATC...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR CAA 90 bp | TCTCAAAGTGATTACACTCATTGGTCGTGCAAACTTTATCTGCCTCAGTACAGGTACGACCTGATTGTCTaGTTGGTCCTTGAGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQSDYTHWSCKLYLPQYRYDLIV*LVLETL Trigger: AAGAGTCTCAAGGACCAACAAGACAATCAGGTCGTA...CCTGTACTGAGGCAGATAAAGTTTGCACGACCAATGAGTGTAATCACTTTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTACTGTACTTAGCTCGGTaGTTCTTGAACCAGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEGIGNHITGVRLDSESLLYLAR*FLNQIL Trigger: CAAGATCTGGTTCAAGAACAACCGAGCTAAGTACAG...TAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS TCA 90 bp | TTTGAAAAGCTAAGTTCCTTGCAGGGTCTTGAGGTATTTGGGAACTaGGTTCTATGGGTATATTCGAAGCCACTTGGAGTTTTGGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: FEKLSSLQGLEVFGN*VLWVYSKPLGVLDA Trigger: TGCATCCAAAACTCCAAGTGGCTTCGAATATACCCATAGAACTCAGTTCCCAAATACCTCAAGACCCTGCAAGGAACTTAGCTTTTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGAGAGGGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGCTCATCAAAATGTTTTaGCAGCAGGCACTGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KQGEGIGNHITGVRLDSELIKMF*QQALLF Trigger: GAACAGCAGTGCCTGCTGCAAAAACATTTTGATGAG...CTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCCCTCTCCTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR CAA 90 bp | AAGCAAGGAGAGGGCGTAGGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTTCTTGAACCAGATCTaGATCTCCCTCTTTGTAACA | + |
|
Preference number: 5 (lower is better) Translates to: KQGEGVGNHITGVRLDSEFLNQI*ISLFVT Trigger: TGTTACAAAGAGGGAGATCAAGATCTGGTTCAAGAA...CTCGCTATCAAGTCTAACTCCAGTTATATGATTACCTACGCCCTCTCCTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | GGCATAGGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTGCTACGACCTGATTGTCTaGTTGGTCCTTGAGACTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GIGNHITGVRLDSESLYCYDLIV*LVLETL Trigger: AAGAGTCTCAAGGACCAACAAGACAATCAGGTCGTA...GCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACCTATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
||
| CDS-3UTR CAA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATGATTCCTGGCTGCAGTaGAGTTTGGGAATGGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNDSWLQ*SLGMES Trigger: GGATTCCATTCCCAAACTCAACTGCAGCCAGGAATC...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
||
| CDS-3UTR CAA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCATGAATCAGGGACTGAAAGTCTaGATTGCATTGTACTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GNHITGVRLDSESLYCMNQGLKV*IALYFL Trigger: CAGGAAGTACAATGCAATCAAGACTTTCAGTCCCTG...ATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GTATCATTTTCTACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACACTTACGACCTGATTGTCTaGTTGGTCCTTGAGACTCTT | + |
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Preference number: 5 (lower is better) Translates to: VSFSTNGLRIMCSQSDYTYDLIV*LVLETL Trigger: AAGAGTCTCAAGGACCAACAAGACAATCAGGTCGTA...AGTGTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGCGAGTCCCTATATTGCATGAATCTGTACTTAGCTCGGTaGTTCTTGAACCAGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: GNHITGVRLDSESLYCMNLYLAR*FLNQIL Trigger: CAAGATCTGGTTCAAGAACAACCGAGCTAAGTACAG...ATTCATGCAATATAGGGACTCGCTATCAAGTCTAACTCCAGTTATATGATTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GTATCATTTTCTACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACACTTGTCTCTGGCAGTGCTaGTTTTATATTCTGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VSFSTNGLRIMCSQSDYTCLWQC*FYILEL Trigger: AAGCTCCAGAATATAAAACAAGCACTGCCAGAGACA...AGTGTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTGCATGAATTGTCTCTGGCAGTGCTaGTTTTATATTCTGGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: GNHITGVRLDSESLYCMNCLWQC*FYILEL Trigger: AAGCTCCAGAATATAAAACAAGCACTGCCAGAGACA...ATTCATGCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CAA 90 bp | GTATCATTTTCTACCAATGGACTCCGAATTATGTGCTCTCAAAGTGATTACACTATGAAGCAGGTATTCTaGGTATTCTTGGTATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VSFSTNGLRIMCSQSDYTMKQVF*VFLVFL Trigger: CAAGAATACCAAGAATACCAAGAATACCTGCTTCAT...AGTGTAATCACTTTGAGAGCACATAATTCGGAGTCCATTGGTAGAAAATGATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS-3UTR CAA 90 bp | GGTAATCATATAACTGGAGTTAGACTTGATAGTGAGTCCCTATATTGCATGAATATGAAGCAGGTATTCTaGGTATTCTTGGTATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GNHITGVRLDSESLYCMNMKQVF*VFLVFL Trigger: CAAGAATACCAAGAATACCAAGAATACCTGCTTCAT...ATTCATGCAATATAGGGACTCACTATCAAGTCTAACTCCAGTTATATGATTACC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086122.10 |
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| CDS-3UTR CAA 90 bp | CCACCCCAAATATATACTAAACAAAGTATCATTTTCTACCAATGGACTCCGAATATGAAGCAGGTATTCTaGGTATTCTTGGTATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PPQIYTKQSIIFYQWTPNMKQVF*VFLVFL Trigger: CAAGAATACCAAGAATACCAAGAATACCTGCTTCAT...ATTCGGAGTCCATTGGTAGAAAATGATACTTTGTTTAGTATATATTTGGGGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095217.11 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | TTGGGAACTGAGTTCTATGGGTATATTCGAAGCCACTaGGAGTTTTGGATGCAAGGAGGGGCCTTCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LGTEFYGYIRSH*EFWMQGGAFGH Trigger: ATGGCCGAAGGCCCCTCCTTGCATCCAAAACTCCAAGTGGCTTCGAATATACCCATAGAACTCAGTTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS TCA 72 bp | TGGAGTGGAGAGGTTTCTCAGAGTAAGCCAGTCATCTaGTGTGTCCAAGTCTTCAAGGATCCTTTGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WSGEVSQSKPVI*CVQVFKDPLPE Trigger: CTCTGGCAAAGGATCCTTGAAGACTTGGACACATCAGATGACTGGCTTACTCTGAGAAACCTCTCCACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | AGGGGCATGGCCATGAAGCAGGTATTCTTGGTATTCTaGGTATTCTTGCGGACAACACATGTCCCCATCACA | + |
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Preference number: 6 (lower is better) Translates to: RGMAMKQVFLVF*VFLRTTHVPIT Trigger: TGTGATGGGGACATGTGTTGTCCGCAAGAATACCAAGAATACCAAGAATACCTGCTTCATGGCCATGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 90 bp | AGCTTCATCCGCCTGTACTTAGCTCGGTTGTTCTTGAACCAGATCTaGATCTCCCTCTTTGTAACACCAACTGATAGTGCCAGCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: SFIRLYLARLFLNQI*ISLFVTPTDSASST Trigger: TGTGGAGCTGGCACTATCAGTTGGTGTTACAAAGAGGGAGATCAAGATCTGGTTCAAGAACAACCGAGCTAAGTACAGGCGGATGAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 |
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| CDS TCA 72 bp | GTTGAGTTTGGGAATGGAATCCTCACCAAATGTGCCTaGACACATGGACTCTCCATTGTCCGAGTCAACAAC | + |
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Preference number: 6 (lower is better) Translates to: VEFGNGILTKCA*THGLSIVRVNN Trigger: GTTGTTGACTCGGACAATGGAGAGTCCATGTGTTCAGGCACATTTGGTGAGGATTCCATTCCCAAACTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | CGCCTGTACTTAGCTCGGTTGTTCTTGAACCAGATCTaGATCTCCCTCTTTGTAACACCAACTGATAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RLYLARLFLNQI*ISLFVTPTDSA Trigger: GGCACTATCAGTTGGTGTTACAAAGAGGGAGATCAAGATCTGGTTCAAGAACAACCGAGCTAAGTACAGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS CAA 72 bp | TCCTCACCAAATGTGCCTGAACACATGGACTCTCCATaGTCCGAGTCAACAACAGGTATGGAACCAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSPNVPEHMDSP*SESTTGMEPGK Trigger: TTTTCCTGGTTCCATACCTGTTGTTGACTCGGACAATGGAGAGTCCATGTGTTCAGGCACATTTGGTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | AAACAATGCAGGGAAGATTCCTGGCTGCAGTTGAGTTaGGGAATGGAATCCTCACCAAATGTGCCTGAACAC | + |
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Preference number: 6 (lower is better) Translates to: KQCREDSWLQLS*GMESSPNVPEH Trigger: GTGTTCAGGCACATTTGGTGAGGATTCCATTCCCAAACTCAACTGCAGCCAGGAATCTTCCCTGCATTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | GCCATGAAGCAGGTATTCTTGGTATTCTTGGTATTCTaGCGGACAACACATGTCCCCATCACAGGCCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: AMKQVFLVFLVF*RTTHVPITGLK Trigger: TTTCAGGCCTGTGATGGGGACATGTGTTGTCCGCAAGAATACCAAGAATACCAAGAATACCTGCTTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | AGCTGTAACAGGGGCATGGCCATGAAGCAGGTATTCTaGGTATTCTTGGTATTCTTGCGGACAACACATGTC | + |
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Preference number: 6 (lower is better) Translates to: SCNRGMAMKQVF*VFLVFLRTTHV Trigger: GACATGTGTTGTCCGCAAGAATACCAAGAATACCAAGAATACCTGCTTCATGGCCATGCCCCTGTTACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173912.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | CATATCTATCTGACAGTGGCATACGACCTGATTGTCTaGTTGGTCCTTGAGACTCTTGCTGAAGTAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: HIYLTVAYDLIV*LVLETLAEVGS Trigger: GGAACCTACTTCAGCAAGAGTCTCAAGGACCAACAAGACAATCAGGTCGTATGCCACTGTCAGATAGATATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS TCA 72 bp | CTAAGTTCCTTGCAGGGTCTTGAGGTATTTGGGAACTaGGTTCTATGGGTATATTCGAAGCCACTTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: LSSLQGLEVFGN*VLWVYSKPLGV Trigger: AACTCCAAGTGGCTTCGAATATACCCATAGAACTCAGTTCCCAAATACCTCAAGACCCTGCAAGGAACTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS CCA 72 bp | CTTTCATTTGTCTCTGGCAGTGCTTGTTTTATATTCTaGAGCTTCATCCGCCTGTACTTAGCTCGGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LSFVSGSACFIF*SFIRLYLARLF Trigger: GAACAACCGAGCTAAGTACAGGCGGATGAAGCTCCAGAATATAAAACAAGCACTGCCAGAGACAAATGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | GTAGGTTCCTTTCAGGGACTGAAAGTCTTGATTGCATaGTACTTCCTGGAGTCATTAGGGGATTCTGACACA | + |
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Preference number: 6 (lower is better) Translates to: VGSFQGLKVLIA*YFLESLGDSDT Trigger: TGTGTCAGAATCCCCTAATGACTCCAGGAAGTACAATGCAATCAAGACTTTCAGTCCCTGAAAGGAACCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS CAA 72 bp | CTTGCTGAAGTAGGTTCCTTTCAGGGACTGAAAGTCTaGATTGCATTGTACTTCCTGGAGTCATTAGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LAEVGSFQGLKV*IALYFLESLGD Trigger: ATCCCCTAATGACTCCAGGAAGTACAATGCAATCAAGACTTTCAGTCCCTGAAAGGAACCTACTTCAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS CAA 72 bp | ATCTATCTGACAGTGGCATACGACCTGATTGTCTTGTaGGTCCTTGAGACTCTTGCTGAAGTAGGTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: IYLTVAYDLIVL*VLETLAEVGSF Trigger: AAAGGAACCTACTTCAGCAAGAGTCTCAAGGACCAACAAGACAATCAGGTCGTATGCCACTGTCAGATAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS GCA 72 bp | AGAAACCGCTTTAGAGCTTTCATTTGTCTCTGGCAGTaGTTGTTTTATATTCTGGAGCTTCATCCGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RNRFRAFICLWQ*LFYILELHPPV Trigger: TACAGGCGGATGAAGCTCCAGAATATAAAACAAGCACTGCCAGAGACAAATGAAAGCTCTAAAGCGGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 |
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| CDS CCA 72 bp | TTGTCCGAGTCAACAACAGGTATGGAACCAGGAAAATaGGTTGACTCAGAAACCGCTTTAGAGCTTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: LSESTTGMEPGK*VDSETALELSF Trigger: AAATGAAAGCTCTAAAGCGGTTTCTGAGTCAACCCATTTTCCTGGTTCCATACCTGTTGTTGACTCGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 |
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| CDS CAA 72 bp | AACCGCTTTAGAGCTTTCATTTGTCTCTGGCAGTGCTaGTTTTATATTCTGGAGCTTCATCCGCCTGTACTT | + |
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Preference number: 6 (lower is better) Translates to: NRFRAFICLWQC*FYILELHPPVL Trigger: AAGTACAGGCGGATGAAGCTCCAGAATATAAAACAAGCACTGCCAGAGACAAATGAAAGCTCTAAAGCGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 |
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| CDS CAA 90 bp | GTGCGTTCTTTTCGAAACTTTCTTAAAGCCATAGGGCCAGTTTGTTaGTTAACATATCTATCTGACAGTGGCATACGACCTGATTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VRSFRNFLKAIGPVC*LTYLSDSGIRPDCL Trigger: AAGACAATCAGGTCGTATGCCACTGTCAGATAGATATGTTAACAAACAAACTGGCCCTATGGCTTTAAGAAAGTTTCGAAAAGAACGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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| CDS CAA 72 bp | TTTCGAAACTTTCTTAAAGCCATAGGGCCAGTTTGTTaGTTAACATATCTATCTGACAGTGGCATACGACCT | + |
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Preference number: 6 (lower is better) Translates to: FRNFLKAIGPVC*LTYLSDSGIRP Trigger: AGGTCGTATGCCACTGTCAGATAGATATGTTAACAAACAAACTGGCCCTATGGCTTTAAGAAAGTTTCGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000086122.10 ENSMUST00000095217.11 ENSMUST00000173395.8 ENSMUST00000173912.8 ENSMUST00000174151.8 ENSMUST00000174443.8 ENSMUST00000174842.2 |
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