Pregenerated sensors for OBI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022120Ensembl transcript IDs: ENSMUST00000022716.4, ENSMUST00000227640.2, ENSMUST00000228210.2, ENSMUST00000228448.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTCATACTCTCTGTGCAGTAGCTCCAGTCTGGTTTTCCGCAGGTaGTTCCTGACCGTATGGCTCAGCATGGGCTCACTCTCACTCGTT | + |
|
Preference number: 1 (lower is better) Translates to: SSYSLCSSSSLVFRR*FLTVWLSMGSLSLV Trigger: AACGAGTGAGAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAGACTGGAGCTACTGCACAGAGAGTATGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| 3UTR CCA 90 bp | TGCAGTAGCTCCAGTCTGGTTTTCCGCAGGTGCTTCCTGACCGTATaGCTCAGCATGGGCTCACTCTCACTCGTTCCTCCAATAATCTCT | + |
|
Preference number: 1 (lower is better) Translates to: CSSSSLVFRRCFLTV*LSMGSLSLVPPIIS Trigger: AGAGATTATTGGAGGAACGAGTGAGAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAGACTGGAGCTACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| 3UTR CCA 90 bp | GACATTCACCAGCCAGTAAGAGGGTTTTTCCCTCTGGTTGGAGAATaGAGCAAGCGAAAAGGCTCCCATGCTTACGGTTGCCACAGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: DIHQPVRGFFPLVGE*SKRKGSHAYGCHRE Trigger: CTCTCTGTGGCAACCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAACCCTCTTACTGGCTGGTGAATGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR CCA 90 bp | CTCTCCCTTACAGCACCTGCCTCCCACTCAGGAACCCAGTTAGTGTaGCTGCAGGCAGCTACACTTTGTTCTAAATCAGCTTCAGCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: LSLTAPASHSGTQLV*LQAATLCSKSASAE Trigger: TTCAGCTGAAGCTGATTTAGAACAAAGTGTAGCTGCCTGCAGCCACACTAACTGGGTTCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR GCA 90 bp | AGCGAAAAGGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATaGAAACAAGAACTTCACTACACAAAAAGGCTCCCTGCGACACAG | + |
|
Preference number: 1 (lower is better) Translates to: SEKAPMLTVATERVT*KQELHYTKRLPATQ Trigger: CTGTGTCGCAGGGAGCCTTTTTGTGTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCCTTTTCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR GCA 90 bp | CTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGTTaGCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACACAAA | + |
|
Preference number: 1 (lower is better) Translates to: LVGEWSKRKGSHAYG*HRESNMQTRTSLHK Trigger: TTTGTGTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTACCTGCTGAGAGGCCCTTGAGATATTCCCAGAGACATCATCTGACAGATGCACCAAGAATGGATTaGCAGGGATGGGCCTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LLPAERPLRYSQRHHLTDAPRMD*QGWASP Trigger: GGGGGAGGCCCATCCCTGCCAATCCATTCTTGGTGC...ATCTGTCAGATGATGTCTCTGGGAATATCTCAAGGGCCTCTCAGCAGGTAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR CAA 90 bp | TTGGGGGCCTTGAACAGAAACGTGTCTTGGCCTCCATTATTTCTCTaGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCAGGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: LGALNRNVSWPPLFL*SFSPLQHLPPTQEP Trigger: GGGTTCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAATGGAGGCCAAGACACGTTTCTGTTCAAGGCCCCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR-3UTR CCA 90 bp | CTACCTGCTGAGAGGCCCTTGAGATATTCCCAGAGACATCATCTGACAGATCACGGAACCCAGTTAGTGTaGCTGCAGGCAGCTACACTT | + |
|
Preference number: 2 (lower is better) Translates to: LPAERPLRYSQRHHLTDHGTQLV*LQAATL Trigger: AAGTGTAGCTGCCTGCAGCCACACTAACTGGGTTCC...GTGATCTGTCAGATGATGTCTCTGGGAATATCTCAAGGGCCTCTCAGCAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCAGGTTCTGAAGGCAGTTaGGCCTTAACAGGCCACCAT | + |
|
Preference number: 2 (lower is better) Translates to: GSHAYGCHRESNMQTRTSGSEGS*ALTGHH Trigger: ATGGTGGCCTGTTAAGGCTCAACTGCCTTCAGAACC...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCTTCTACCTCTTTCTGCAAGCAATCTATTTCATCCTCATACTCTCTGTGCAAGGGTTTTCAGGAGTaGTCGGGACTCTGCAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSSTSFCKQSISSSYSLCKGFQE*SGLCRL Trigger: CAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTT...GCACAGAGAGTATGAGGATGAAATAGATTGCTTGCAGAAAGAGGTAGAAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAGACATCATCTGACAGATCACCTTACAGGCTGGCAAGAGGCACCAAGAATGCTGAATCTAAGACTTaGCACTTGATGTTCAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: PETSSDRSPYRLARGTKNAESKT*HLMFRH Trigger: GTGTCTGAACATCAAGTGCCAAGTCTTAGATTCAGC...ATTCTTGGTGCCTCTTGCCAGCCTGTAAGGTGATCTGTCAGATGATGTCTCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCAAGATGATGTCATAAAACAGCTCAGGGGCAGGTTTATCTCATTAGTACTATGGGGTGGAGCCTTTTaGCCTAGATGGCTCTATTGT | + |
|
Preference number: 2 (lower is better) Translates to: DQDDVIKQLRGRFISLVLWGGAF*PRWLYC Trigger: ACAATAGAGCCATCTAGGTCAAAAGGCTCCACCCCA...TAGTACTAATGAGATAAACCTGCCCCTGAGCTGTTTTATGACATCATCTTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCTCTGAGAGAACAATATaGAGCCAATCCAGATACACA | + |
|
Preference number: 2 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFSERTI*SQSRYT Trigger: TGTGTATCTGGATTGGCTCCATATTGTTCTCTCAGA...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR CAA 90 bp | TCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTaGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SVNPLRSECHFSSMA*VIVRPALNTNKMRN Trigger: ATTCCTCATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR-3UTR CCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCCACAGGCACACAAAATaGACAGAATACAATATAACA | + |
|
Preference number: 2 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFHRHTK*TEYNIT Trigger: TGTTATATTGTATTCTGTCCATTTTGTGTGCCTGTG...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR GCA 72 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTCTTCTCCAAGACACTGCTACCTGCTGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CCCCCCCCCCCC*SSPRHCYLLRG Trigger: GCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| 3UTR GCA 72 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTCTTCTCCAAGACACTGCTACCTGCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: CCCCCCCCCCCC*CSSPRHCYLLR Trigger: TCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| 3UTR GCA 72 bp | TCTCTGTGCAGTAGCTCCAGTCTGGTTTTCCGCAGGTaGTTCCTGACCGTATGGCTCAGCATGGGCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SLCSSSSLVFRR*FLTVWLSMGSL Trigger: GAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAGACTGGAGCTACTGCACAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| 3UTR CCA 72 bp | TCCAGTCTGGTTTTCCGCAGGTGCTTCCTGACCGTATaGCTCAGCATGGGCTCACTCTCACTCGTTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLVFRRCFLTV*LSMGSLSLVPP Trigger: TGGAGGAACGAGTGAGAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAGACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| 3UTR TCA 72 bp | GCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTaGGAGGCCCTTGAGATATTCCCAGAGACATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: AAAALLQDTATC*EALEIFPETSS Trigger: AGATGATGTCTCTGGGAATATCTCAAGGGCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| 3UTR CCA 72 bp | CAGCCAGTAAGAGGGTTTTTCCCTCTGGTTGGAGAATaGAGCAAGCGAAAAGGCTCCCATGCTTACGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QPVRGFFPLVGE*SKRKGSHAYGC Trigger: GCAACCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAACCCTCTTACTGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR CCA 72 bp | ACAGCACCTGCCTCCCACTCAGGAACCCAGTTAGTGTaGCTGCAGGCAGCTACACTTTGTTCTAAATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TAPASHSGTQLV*LQAATLCSKSA Trigger: AGCTGATTTAGAACAAAGTGTAGCTGCCTGCAGCCACACTAACTGGGTTCCTGAGTGGGAGGCAGGTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR CCA 72 bp | TCCCAGAGACATCATCTGACAGATCACCTTACAGGCTaGCAAGAGGCACCAAGAATGGATTGGCAGGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SQRHHLTDHLTG*QEAPRMDWQGW Trigger: CCATCCCTGCCAATCCATTCTTGGTGCCTCTTGCCAGCCTGTAAGGTGATCTGTCAGATGATGTCTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR GCA 72 bp | CATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTaGCTCCCACTCAGGAACCCAGTTAGTGTGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HYFSCRSLPYST*LPLRNPVSVAA Trigger: TGCAGCCACACTAACTGGGTTCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR CCA 72 bp | CATTCACCAGCCAGTAAGAGGGTTTTTCCCTCTGGTTaGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: HSPASKRVFPSG*RMEQAKRLPCL Trigger: TAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAACCCTCTTACTGGCTGGTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGTGCTTCGCGCTCACATTGCCCCATTCACACCTGTTACTTCTCATTTTAGGTTTTTCCCTCTGGTaGGAGAATGGAGCAAGCGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLCFALTLPHSHLLLLILGFSLW*ENGASE Trigger: TTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAACC...TAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCTCTGTGCCTCCATCCCCTCACTTCTCAGGAGTAACCTGTTACATCCATTCTAAGACTTGGCACTaGATGTTCAGACACATTCGT | + |
|
Preference number: 3 (lower is better) Translates to: YLSVPPSPHFSGVTCYIHSKTWH*MFRHIR Trigger: ACGAATGTGTCTGAACATCAAGTGCCAAGTCTTAGA...ATGGATGTAACAGGTTACTCCTGAGAAGTGAGGGGATGGAGGCACAGAGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR-3UTR CAA 90 bp | AACCTGTTACATCCATCCTACGGTACCAGGCAGAGAACACATCACATGACCAAGCCTCCATTATTTCTCTaGTCGTTCTCTCCCTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: NLLHPSYGTRQRTHHMTKPPLFL*SFSPLQ Trigger: CTGTAAGGGAGAGAACGACAAGAGAAATAATGGAGG...CTTGGTCATGTGATGTGTTCTCTGCCTGGTACCGTAGGATGGATGTAACAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| 3UTR GCA 72 bp | TTCTGCAAGCAATCTATTTCATCCTCATACTCTCTGTaGAGTAGCTCCAGTCTGGTTTTCCGCAGGTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FCKQSISSSYSL*SSSSLVFRRCF Trigger: GAAGCACCTGCGGAAAACCAGACTGGAGCTACTGCACAGAGAGTATGAGGATGAAATAGATTGCTTGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGAAGGGTTTTCAGGAGTaGTCGGGACTCTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCCCCCCCCSSPRHCYLKGFQE*SGLCRL Trigger: CAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTT...CAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGAAGGGTTTTCAGGAGTaGTCGGGACTCTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLFSKTLLPAERKGFQE*SGLCRL Trigger: CAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTT...CCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | CCGCAGGTGCTTCCTGACCGTATGGCTCAGCATGGGCTCACTCTCACTCGTTCCTTCCCCAAGCAAATGTaGCACGTGATGGGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQVLPDRMAQHGLTLTRSFPKQM*HVMGRV Trigger: CACTCTGCCCATCACGTGCCACATTTGCTTGGGGAA...GGAACGAGTGAGAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGCTGCTTCCTGACCGTATaGCTCAGCATGGGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CCCCCCCSSPRHCYLLRGCFLTV*LSMGSL Trigger: GAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCA...GCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTTTCCCCAAGCAAATGTaGCACGTGATGGGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLLFSKTLLPAFPKQM*HVMGRV Trigger: CACTCTGCCCATCACGTGCCACATTTGCTTGGGGAA...AGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGCGGGACTCTGCAGGCTaGACACTGGCTATTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLFSKTLLPAERRDSAG*TLAIIL Trigger: AAGAATAATAGCCAGTGTCCAGCCTGCAGAGTCCCG...CCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGCGGGACTCTGCAGGCTaGACACTGGCTATTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLFSKTLLPAERDSAG*TLAIIL Trigger: AAGAATAATAGCCAGTGTCCAGCCTGCAGAGTCCCG...CTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGCACACATGGTTGTTGGTaGATACGACAGGCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: CCCCCCCSSPRHCYLLRGTHGCW*IRQADV Trigger: TACGTCAGCCTGTCGTATGCACCAACAACCATGTGT...GCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGACACATGGTTGTTGGTaGATACGACAGGCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLFSKTLLPAERTHGCW*IRQADV Trigger: TACGTCAGCCTGTCGTATGCACCAACAACCATGTGT...CCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGTCCTCATACTCTCTGTaGAGTAGCTCCAGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLFSKTLLPAERSSYSL*SSSSLV Trigger: AACCAGACTGGAGCTACTGCACAGAGAGTATGAGGA...CCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTTCCTCATACTCTCTGTaGAGTAGCTCCAGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLLFSKTLLPASSYSL*SSSSLV Trigger: AACCAGACTGGAGCTACTGCACAGAGAGTATGAGGA...AGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| 3UTR CAA 72 bp | CTCAGTCTGGGGCAGTACCCTGAGTTCAAGCGCTGCTaGCTCCACTTACTTACTCCTGGGCAGACTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LSLGQYPEFKRC*LHLLTPGQTRI Trigger: TATCCTAGTCTGCCCAGGAGTAAGTAAGTGGAGCAAGCAGCGCTTGAACTCAGGGTACTGCCCCAGACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGTGTTTGTCTTCATTTTaGCTGCCCTGCATCAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLFSKTLLPAERCLSSF*LPCINA Trigger: AGCGTTGATGCAGGGCAGTCAAAATGAAGACAAACA...CCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGTAGGCTGGCTTTGACCTTGCTGCCACTGAGAAGGAGACCAACTGGGGTGACAGCCCATTGGAGTTaGAATGGCCTCACTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLALTLLPLRRRPTGVTAHWS*NGLTLC Trigger: ACACAGAGTGAGGCCATTGCAACTCCAATGGGCTGT...CACCCCAGTTGGTCTCCTTCTCAGTGGCAGCAAGGTCAAAGCCAGCCTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGTGGGTCCATTTTACTTaGATTATCGGCCAGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CCCCCCCCCCSSPRHCYLWVHFT*IIGQWM Trigger: CATCCACTGGCCGATAATCCAAGTAAAATGGACCCA...CAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGGCTGTTGTCAGACTCTaGCATCATGGAGTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRAVVRL*HHGVQL Trigger: GAGCTGGACTCCATGATGTCAGAGTCTGACAACAGC...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGTGTCTTCATTTTGACTaGCCTGCATCAACGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLFSKTLLPAECLHFD*PASTLK Trigger: CTTTAGCGTTGATGCAGGGCAGTCAAAATGAAGACA...CTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGTGTCTTCATTTTGACTaGCCTGCATCAACGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCCCCCCCCCSSPRHCYLCLHFD*PASTLK Trigger: CTTTAGCGTTGATGCAGGGCAGTCAAAATGAAGACA...CAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | TCCATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCAGGATGCTTCCTGACCGTATaGCTCAGCATGGGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: SIISLVVLSLTAPASHSGCFLTV*LSMGSL Trigger: GAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCA...TCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTTGGCTTTGGACGGGCTaGCGTTGGCAAGGCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPPNPADVPAFQHIMILTWLWTG*RWQGCS Trigger: AGAGCAGCCTTGCCAACGCCAGCCCGTCCAAAGCCA...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCAAAGGGTTTTCAGGAGTaGTCGGGACTCTGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSKGFQE*SGLCRL Trigger: CAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTT...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCATGGTGCTCTCCTGTCTaGCAGAACCGGAGTCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSWCSPV*QNRSQL Trigger: TAGCTGACTCCGGTTCTGTCAGACAGGAGAGCACCA...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTCATCGGAGTCTCTCTTaGACCCAGCCGAGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENVSESSKIGVPFLQHGLHRSLS*TQPRFC Trigger: ACAGAACCTCGGCTGGGTGCAAGAGAGACTCCGATG...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | TACCTCTCTGTGCCTCCATCCCCTCACTTCTCAGGAGTAACCTGTTACATCCATTTCCCCAAGCAAATGTaGCACGTGATGGGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLSVPPSPHFSGVTCYIHFPKQM*HVMGRV Trigger: CACTCTGCCCATCACGTGCCACATTTGCTTGGGGAA...ATGGATGTAACAGGTTACTCCTGAGAAGTGAGGGGATGGAGGCACAGAGAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCATGCTTCCTGACCGTATaGCTCAGCATGGGCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSCFLTV*LSMGSL Trigger: GAGTGAGCCCATGCTGAGCCATACGGTCAGGAAGCA...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTGCTGAGAGGCTGGATTATCGGCCAGTaGATGTTTGTCTTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCCCCCSSPRHCYLLRGWIIGQ*MFVFIL Trigger: CAAAATGAAGACAAACATCCACTGGCCGATAATCCA...GCCTCTCAGCAGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTCCAGCCGAGGTTCTGTaGGCTTGGGGTATCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENVSESSKIGVPFLQHGLPAEVL*AWGICL Trigger: AAGACAGATACCCCAAGCCCACAGAACCTCGGCTGG...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCAAGCTTTTGGTGGCTTTaGACGGGCTGGCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSSFWWL*TGWRWQ Trigger: TTGCCAACGCCAGCCCGTCCAAAGCCACCAAAAGCT...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTTGGAGCTCCCTGCTTTaGTCACAGGGTTCTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENVSESSKIGVPFLQHGLWSSLL*SQGSLC Trigger: ACAGAGAGAACCCTGTGATCAAAGCAGGGAGCTCCA...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTAACCCGTCAGCTGTaGGAGCAGGTTTGGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSLTRQL*EQVWKG Trigger: ACCTTTCCAAACCTGCTCTCACAGCTGACGGGTTAG...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTCTTCTCCAAGACACTGCTACCTACAAGTCGATGCAAATaGAACAAAACACATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLLLLLLFSKTLLPTSRCK*NKTHGC Trigger: ACAACCATGTGTTTTGTTCCATTTGCATCGACTTGT...AGGTAGCAGTGTCTTGGAGAAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGCTGCAGGCTGGACACTaGCTATTATTCTTCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRLQAGH*LLFFNH Trigger: GTGGTTGAAGAATAATAGCCAGTGTCCAGCCTGCAG...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTCCATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCTGGGTCCATTTTACTTaGATTATCGGCCAGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLHYFSCRSLPYSTCLPLWVHFT*IIGQWM Trigger: CATCCACTGGCCGATAATCCAAGTAAAATGGACCCA...GAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAATGGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGACATCATCTGACAGATCACCTTACAGGCTGGCAAGAGGCACCAAGAATCCATTGGAGTTGCAATaGCCTCACTCTGTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PETSSDRSPYRLARGTKNPLELQ*PHSVCE Trigger: CTCACACACAGAGTGAGGCCATTGCAACTCCAATGG...ATTCTTGGTGCCTCTTGCCAGCCTGTAAGGTGATCTGTCAGATGATGTCTCTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGTCACTAGTTCCTGAATaGGAAGTGGAGTGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRSLVPE*EVEWRE Trigger: TTCTCTCCACTCCACTTCTCATTCAGGAACTAGTGA...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGGGGCCCCTTGCTATCTaGAGAGGGTGCCCTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSSMALVIVRPALNTNKMGPLAI*RGCPLA Trigger: TGCCAGAGGGCACCCTCTGCAGATAGCAAGGGGCCC...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | CAGTTGTGCTTCGCGCTCACATTGCCCCATTCACACCTGTTACTTCTCATTTTATTCCCCAAGCAAATGTaGCACGTGATGGGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLCFALTLPHSHLLLLILFPKQM*HVMGRV Trigger: CACTCTGCCCATCACGTGCCACATTTGCTTGGGGAA...TAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | ACACTGCTACCTGCTGAGAGGCCCTTGAGATATTCCCAGAGACATCATCTGACACTGCAGGCTGGACACTaGCTATTATTCTTCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLPAERPLRYSQRHHLTLQAGH*LLFFNH Trigger: GTGGTTGAAGAATAATAGCCAGTGTCCAGCCTGCAG...TGTCAGATGATGTCTCTGGGAATATCTCAAGGGCCTCTCAGCAGGTAGCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACGGGACTCTGCAGGCTaGACACTGGCTATTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSRDSAG*TLAIIL Trigger: AAGAATAATAGCCAGTGTCCAGCCTGCAGAGTCCCG...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACATCCACGTCTTCCTTaGCCTCCTCTGAGTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSHPRLP*PPLSVS Trigger: TGAAACACTCAGAGGAGGCCAAGGAAGACGTGGATG...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTGTTTTGGGGACAGTTTaGTTCAGTCCTGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENVSESSKIGVPFLQHGLVLGTV*FSPAGA Trigger: AGCACCAGCAGGACTGAACCAAACTGTCCCCAAAAC...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGTCTGGGCATAGCTTGTaGAGCAACAATCCCAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRSGHSL*SNNPKI Trigger: GATTTTGGGATTGTTGCTCCACAAGCTATGCCCAGA...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR CAA 72 bp | TTGAACAGAAACGTGTCTTGGCCTCCATTATTTCTCTaGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNRNVSWPPLFL*SFSPLQHLPPT Trigger: AGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAATGGAGGCCAAGACACGTTTCTGTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR TCA 90 bp | ATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCAGGAACCTGTTTGTCTTCATTTTaGCTGCCCTGCATCAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: IISLVVLSLTAPASHSGTCLSSF*LPCINA Trigger: AGCGTTGATGCAGGGCAGTCAAAATGAAGACAAACA...GGTTCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR TCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACAGAAGGTGAGGCCAGGTaGGAAGCACTGGCCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTEGEAR*EALAEP Trigger: TGGCTCGGCCAGTGCTTCTCACCTGGCCTCACCTTC...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTTCTGGAGTGTTCAGCTaGAGGCAGCTAAGTGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPPNPADVPAFQHIMILTSGVFS*RQLSDK Trigger: CTTGTCACTTAGCTGCCTTCAGCTGAACACTCCAGA...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGCTTCTCACTCAATTTTaGAGGTATCTCCCCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRLLTQF*RYLPNR Trigger: TCTGTTGGGGAGATACCTTCAAAATTGAGTGAGAAG...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | AAGAGAACAAACAACACAGAGACAAATCCGATCATCTCTCTAAGCTCTCTGGTTAGAAACTCCCTGCCTTaGGGTGACTTTGAGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KRTNNTETNPIISLSSLVRNSLP*GDFEGP Trigger: GGGGCCCTCAAAGTCACCTCAAGGCAGGGAGTTTCT...AACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCAGTCGCTTGGCTTGCTaGCCCACTCTCTTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFSRLAC*PTLFPS Trigger: ACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACT...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTCTTTTTGGAGCTCCCTaGTTTGATCACAGGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENVSESSKIGVPFLQHGLLFGAP*FDHRVL Trigger: GAGAACCCTGTGATCAAAGCAGGGAGCTCCAAAAAG...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | CAGTTGTGCTTCGCGCTCACATTGCCCCATTCACACCTGTTACTTCTCATTTTAATAATCCCTGGGAACTaGTTAACAGAGCACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCFALTLPHSHLLLLILIIPGN*LTEHPG Trigger: CCCAGGGTGCTCTGTTAAGCAGTTCCCAGGGATTAT...TAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACAAACAACACAGAGACAAATCCGATCATCTCTCTAAGCTCTCTGGTTCTGGTTTTCCGCAGGTaGTTCCTGACCGTATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTNNTETNPIISLSSLVLVFRR*FLTVWL Trigger: GAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAG...AACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GCCTACCTCTCTGTGCCTCCATCCCCTCACTTCTCAGGAGTAACCTGTTACATCACAAGTCGATGCAAATaGAACAAAACACATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AYLSVPPSPHFSGVTCYITSRCK*NKTHGC Trigger: ACAACCATGTGTTTTGTTCCATTTGCATCGACTTGT...GATGTAACAGGTTACTCCTGAGAAGTGAGGGGATGGAGGCACAGAGAGGTAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGTGGATTATCGGCCAGTaGATGTTTGTCTTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRWIIGQ*MFVFIL Trigger: CAAAATGAAGACAAACATCCACTGGCCGATAATCCA...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCATGGGTCCATTTTACTTaGATTATCGGCCAGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSWVHFT*IIGQWM Trigger: CATCCACTGGCCGATAATCCAAGTAAAATGGACCCA...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACAGCAGAGGGTGCCCTCTaGCACAGAGCATCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTAEGAL*HRASTS Trigger: AGACGTGGATGCTCTGTGCCAGAGGGCACCCTCTGC...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACAGACTCTGACATCATaGAGTCCAGCTCAGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSQTLTS*SPAQRF Trigger: AAATCTCTGAGCTGGACTCCATGATGTCAGAGTCTG...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACTCTTCACTCATCTCGTaGTCAGCTGGAGAAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PMLTVATERVTCKQELHYSSLIS*SAGERR Trigger: TCTCCTTTCTCCAGCTGACCACGAGATGAGTGAAGA...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GTTTTTCCCTCTGGTTGGAGAATGGAGCAAGCGAAAAGGCTCCCATGCTTACGGCTGAAACAAACAGTTTaGAGGTTTGACCTCACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFPSGWRMEQAKRLPCLRLKQTV*RFDLTS Trigger: ACTAGTGAGGTCAAACCTCCAAACTGTTTGTTTCAG...CCGTAAGCATGGGAGCCTTTTCGCTTGCTCCATTCTCCAACCAGAGGGAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | ACACTGCTACCTGCTGAGAGGCCCTTGAGATATTCCCAGAGACATCATCTGACAAATGGTCTTGATCTGTaGCTCCAAGCTGAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLPAERPLRYSQRHHLTNGLDL*LQAEIF Trigger: AAAAATCTCAGCTTGGAGTCACAGATCAAGACCATT...TGTCAGATGATGTCTCTGGGAATATCTCAAGGGCCTCTCAGCAGGTAGCAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGCTGAAGGCAGCTAAGTaGCAAGGGAGTGCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSSMALVIVRPALNTNKMLKAAK*QGSAGS Trigger: GCTTCCTGCACTCCCTTGTCACTTAGCTGCCTTCAG...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCTCCTCATACTCTCTGTaGAGTAGCTCCAGTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFSSYSL*SSSSLV Trigger: AACCAGACTGGAGCTACTGCACAGAGAGTATGAGGA...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | CAGTTGTGCTTCGCGCTCACATTGCCCCATTCACACCTGTTACTTCTCATTTTAGAGGTTCTGTGGGCTTaGGGTATCTGTCTTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QLCFALTLPHSHLLLLILEVLWA*GICLCF Trigger: AAAACAAAGACAGATACCCCAAGCCCACAGAACCTC...TAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACTGTTCTACTTTGGACTaGAGAGCAGCAACTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PMLTVATERVTCKQELHYCSTLD*RAATVN Trigger: GTTTACAGTTGCTGCTCTTCAGTCCAAAGTAGAACA...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACTTCAGGTGTGCTACTTaGGACTCTAGTTCCTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: PMLTVATERVTCKQELHYFRCAT*DSSSSI Trigger: TATAGAGGAACTAGAGTCTCAAGTAGCACACCTGAA...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGTTCCTTGGCCTCCTCTaGGTGTTTCAGGTGTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FSSMALVIVRPALNTNKMFLGLL*VFQVCY Trigger: GTAGCACACCTGAAACACTCAGAGGAGGCCAAGGAA...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACATCTGCTGCTAGAAGGTaGGGCCAGGTGAGAAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTSAARR*GQVRST Trigger: AGTGCTTCTCACCTGGCCTCACCTTCTAGCAGCAGA...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTCTGCAAGCAATCTATTTCATCCTCATACTCTCTGTGCAGTAGCTCCAGTACACATGGTTGTTGGTaGATACGACAGGCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFCKQSISSSYSLCSSSSTHGCW*IRQADV Trigger: TACGTCAGCCTGTCGTATGCACCAACAACCATGTGT...ACTGGAGCTACTGCACAGAGAGTATGAGGATGAAATAGATTGCTTGCAGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTTATTACAAGGGCTCTTaGTGTTGTCAGACTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VPPNPADVPAFQHIMILTYYKGS*CCQTLT Trigger: TGTCAGAGTCTGACAACAGCAAGAGCCCTTGTAATA...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTATGGAACAAAACACATaGTTGTTGGTGCATACGACA | + |
|
Preference number: 4 (lower is better) Translates to: ENVSESSKIGVPFLQHGLMEQNT*LLVHTT Trigger: TGTCGTATGCACCAACAACCATGTGTTTTGTTCCAT...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | AACCTGTTACATCCATCCTACGGTACCAGGCAGAGAACACATCACATGACCAAGTGGATTATCGGCCAGTaGATGTTTGTCTTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NLLHPSYGTRQRTHHMTKWIIGQ*MFVFIL Trigger: CAAAATGAAGACAAACATCCACTGGCCGATAATCCA...CTTGGTCATGTGATGTGTTCTCTGCCTGGTACCGTAGGATGGATGTAACAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCATATCTGTCTTTGTTTTaGGGACAGTTTGGTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSYLSLF*GQFGSV Trigger: GACTGAACCAAACTGTCCCCAAAACAAAGACAGATA...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACAAACAACACAGAGACAAATCCGATCATCTCTCTAAGCTCTCTGGTTGATAAGCAGCATCCATaGACGCCTCACTGGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRTNNTETNPIISLSSLVDKQHP*TPHWMF Trigger: GAACATCCAGTGAGGCGTCCATGGATGCTGCTTATC...AACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACAATGGTCTTGATCTGTaGCTCCAAGCTGAGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PMLTVATERVTCKQELHYNGLDL*LQAEIF Trigger: AAAAATCTCAGCTTGGAGTCACAGATCAAGACCATT...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | ATAAAACCTAAGAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCCTGAGATGGTTTGCATaGTTTTTGGAGCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKPKKTSVNPLRSECHFSLRWFA*FLELPA Trigger: AGCAGGGAGCTCCAAAAAGCATGCAAACCATCTCAG...GGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTCTTAGGTTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GACCAAGATGATGTCATAAAACAGCTCAGGGGCAGGTTTATCTCATTAGTACTACTGCAGGCTGGACACTaGCTATTATTCTTCAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DQDDVIKQLRGRFISLVLLQAGH*LLFFNH Trigger: GTGGTTGAAGAATAATAGCCAGTGTCCAGCCTGCAG...TAGTACTAATGAGATAAACCTGCCCCTGAGCTGTTTTATGACATCATCTTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCCATACTGTTCTACTTTaGACTGAAGAGCAGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFHTVLL*TEEQQL Trigger: CAGTTGCTGCTCTTCAGTCCAAAGTAGAACAGTATG...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| 3UTR CAA 72 bp | CCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTaGGTAATAGTTAGGCCAGCATTAAACACAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLRSECHFSSMA*VIVRPALNTNK Trigger: TTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCAACCTTCCAAACTTTTaGGGAGATCTGTTGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFNLPNF*GDLLST Trigger: AGTTGACAACAGATCTCCTCAAAAGTTTGGAAGGTT...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACAGACCTCACTAGTTCCTaGATGAGAAGTGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTDLTSS*MRSGVE Trigger: CTCCACTCCACTTCTCATTCAGGAACTAGTGAGGTC...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACACAAGTCGATGCAAATaGAACAAAACACATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PMLTVATERVTCKQELHYTSRCK*NKTHGC Trigger: ACAACCATGTGTTTTGTTCCATTTGCATCGACTTGT...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCACCAGTTTTCTGAGATaGTTTGCATGCTTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFTSFLR*FACFLE Trigger: CTCCAAAAAGCATGCAAACCATCTCAGAAAACTGGT...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCAGTTATTACAGGCATTTaGAGAATCACAGAAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSHAYGCHRESNMQTRTSVITGI*RITEII Trigger: GATGATTTCTGTGATTCTCCAAATGCCTGTAATAAC...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGGTTCTAGAGCTTTCTTaGGGCGATTGGTTTCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSSMALVIVRPALNTNKMVLELS*GDWFHV Trigger: AACGTGAAACCAATCGCCTCAAGAAAGCTCTAGAAC...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACAACACATGGTTGTTGGTaGATACGACAGGCTGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTTHGCW*IRQADV Trigger: TACGTCAGCCTGTCGTATGCACCAACAACCATGTGT...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGAACAAACAACACAGAGACAAATCCGATCATCTCTCTAAGCTCTCTGGTTTGTCTTCATTTTGACTaGCCTGCATCAACGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTNNTETNPIISLSSLVCLHFD*PASTLK Trigger: CTTTAGCGTTGATGCAGGGCAGTCAAAATGAAGACA...AACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | ATAAAACCTAAGAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCTCCTCAAATAATCCCTaGGAACTGCTTAACAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKPKKTSVNPLRSECHFSSSNNP*ELLNRA Trigger: TGCTCTGTTAAGCAGTTCCCAGGGATTATTTGAGGA...GGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTCTTAGGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACATGTTTGTCTTCATTTTaGCTGCCCTGCATCAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTCLSSF*LPCINA Trigger: AGCGTTGATGCAGGGCAGTCAAAATGAAGACAAACA...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR TCA 90 bp | ATAAAACCTAAGAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCTATCTTTCTCTTGGTTaGCTGGTTCCCATTCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: IKPKKTSVNPLRSECHFSYLSLG*LVPILT Trigger: AGTAAGAATGGGAACCAGTCAACCAAGAGAAAGATA...GGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTCTTAGGTTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGAACAAACAACACAGAGACAAATCCGATCATCTCTCTAAGCTCTCTGGTTTCTGTATCTTTCTCTTaGTTGACTGGTTCCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRTNNTETNPIISLSSLVSVSFS*LTGSHS Trigger: AGAATGGGAACCAGTCAACCAAGAGAAAGATACAGA...AACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | ACAATATGGAGCCAATCCAGATACACACAACATTCCTTACAAAGAGAACAAACATTTCTCTTGGTTGACTaGTTCCCATTCTTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIWSQSRYTQHSLQREQTFLLVD*FPFLLL Trigger: GAGGAGTAAGAATGGGAACCAGTCAACCAAGAGAAA...TGTTTGTTCTCTTTGTAAGGAATGTTGTGTGTATCTGGATTGGCTCCATATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CCA 90 bp | TTTAAGTTCTTCTACCTCTTTCTGCAAGCAATCTATTTCATCCTCATACTCTCTACAAGTCGATGCAAATaGAACAAAACACATGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKFFYLFLQAIYFILILSTSRCK*NKTHGC Trigger: ACAACCATGTGTTTTGTTCCATTTGCATCGACTTGT...AGAGAGTATGAGGATGAAATAGATTGCTTGCAGAAAGAGGTAGAAGAACTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS TCA 90 bp | ACAGAACCGGAGTCAGCTAGTCTGCTGCTAGAAGGTGAGGCCAGGTaGGAAGCACTGGCCGAGCCAGCCTGCTTTCTGGCACTGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: TEPESASLLLEGEAR*EALAEPACFLALSL Trigger: GAGTGACAGTGCCAGAAAGCAGGCTGGCTCGGCCAGTGCTTCTCACCTGGCCTCACCTTCTAGCAGCAGACTAGCTGACTCCGGTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 90 bp | AAGGTGAGGCCAGGTGAGAAGCACTGGCCGAGCCAGCCTGCTTTCTaGCACTGTCACTCTGATTCTTTGGTGGTCCAAGCTCATCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KVRPGEKHWPSQPAF*HCHSDSLVVQAHRC Trigger: GCAGCGATGAGCTTGGACCACCAAAGAATCAGAGTGACAGTGCCAGAAAGCAGGCTGGCTCGGCCAGTGCTTCTCACCTGGCCTCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | AGCTCCAGTCTGGTTTTCCGCAGGTGCTTCCTGACCGTATGGCTCAGCATGGGCAGGCTGACGTACCTCTaGCCTCTTGTCCCAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSLVFRRCFLTVWLSMGRLTYL*PLVPEL Trigger: CAACTCTGGGACAAGAGGCAAGAGGTACGTCAGCCT...GCCCATGCTGAGCCATACGGTCAGGAAGCACCTGCGGAAAACCAGACTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS GCA 90 bp | GCTGCCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAGTCTCTCTTaGACCCAGCCGAGGTTCTGTGGGCTTGGGGTATCTGTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AAPLSFQVSVHRSLS*TQPRFCGLGVSVFV Trigger: AACAAAGACAGATACCCCAAGCCCACAGAACCTCGGCTGGGTGCAAGAGAGACTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 90 bp | TGTCCATCGGAGTCTCTCTTGCACCCAGCCGAGGTTCTGTGGGCTTaGGGTATCTGTCTTTGTTTTGGGGACAGTTTGGTTCAGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSESLLHPAEVLWA*GICLCFGDSLVQSC Trigger: GCAGGACTGAACCAAACTGTCCCCAAAACAAAGACAGATACCCCAAGCCCACAGAACCTCGGCTGGGTGCAAGAGAGACTCCGATGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | TTGAGTAGGCTGGCTTTGACCTTGCTGCCACTGAGAAGGAGACCAACTGGGGTGGGATCCAGAATGGTCTaGATCTGTGACTCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSRLALTLLPLRRRPTGVGSRMV*ICDSKL Trigger: CAGCTTGGAGTCACAGATCAAGACCATTCTGGATCC...CACCCCAGTTGGTCTCCTTCTCAGTGGCAGCAAGGTCAAAGCCAGCCTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTAGCTCATCGCTGCCGTaGGGCCCCTTGCTATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ENVSESSKIGVPFLQHGLSSSLP*GPLLSA Trigger: TGCAGATAGCAAGGGGCCCAACGGCAGCGATGAGCT...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 90 bp | CTTCCTTCTTGTAACTTGTCAGGTTCCTCGAGAAACTCCCTGCCTTaGGGTGACTTTGAGGGCCCCTCCACCTCCACCGATTTAAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: LPSCNLSGSSRNSLP*GDFEGPSTSTDLKP Trigger: CGGTTTTAAATCGGTGGAGGTGGAGGGGCCCTCAAAGTCACCTCAAGGCAGGGAGTTTCTCGAGGAACCTGACAAGTTACAAGAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GGCCTCCATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCGGATCCAGAATGGTCTaGATCTGTGACTCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLHYFSCRSLPYSTCLPLGSRMV*ICDSKL Trigger: CAGCTTGGAGTCACAGATCAAGACCATTCTGGATCC...GAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAATGGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CAA 90 bp | AACCTGTTACATCCATCCTACGGTACCAGGCAGAGAACACATCACATGACCAAGGGGAACCACAGCCCATaGGAGTTGCAATGGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLLHPSYGTRQRTHHMTKGNHSP*ELQWPH Trigger: GTGAGGCCATTGCAACTCCAATGGGCTGTGGTTCCC...CTTGGTCATGTGATGTGTTCTCTGCCTGGTACCGTAGGATGGATGTAACAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS GCA 90 bp | CATAAAGCTCATCCTCTTTGTAAGGTGCACAGTCGCTTGGCTTGCTaGCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAGTCTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HKAHPLCKVHSRLAC*PTLFPSKCPSESLL Trigger: CAAGAGAGACTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 90 bp | TACCATAAAGCTCATCCTCTTTGTAAGGTGCACAGTCGCTTGGCTTaGTGCCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: YHKAHPLCKVHSRLA*CPTLFPSKCPSESL Trigger: GAGAGACTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 90 bp | AGTGCAGGAAGCTGGGATACCATAAAGCTCATCCTCTTTGTAAGGTaGACAGTCGCTTGGCTTGCTGCCCCACTCTCTTTCCAAGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SAGSWDTIKLILFVR*TVAWLAAPLSFQVS Trigger: ACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATGGTATCCCAGCTTCCTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 90 bp | TGGGATACCATAAAGCTCATCCTCTTTGTAAGGTGCACAGTCGCTTaGCTTGCTGCCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WDTIKLILFVRCTVA*LAAPLSFQVSVHRS Trigger: ACTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATGGTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 90 bp | CGTTTCCCTCTGAACCGTCAAACTCCAAGCTCTGGGCATAGCTTGTaGAGCAACAATCCCAAAATCCTGTCTTTGAGGAAGCAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RFPLNRQTPSSGHSL*SNNPKILSLRKQSS Trigger: ACTGCTTTGCTTCCTCAAAGACAGGATTTTGGGATTGTTGCTCCACAAGCTATGCCCAGAGCTTGGAGTTTGACGGTTCAGAGGGAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCGCATCCACGTCTTCCTaGGCCTCCTCTGAGTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFASTSS*ASSECF Trigger: GAAACACTCAGAGGAGGCCAAGGAAGACGTGGATGC...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 90 bp | TCAACCACAAGTCGATGCAAATGGAACAAAACACATGGTTGTTGGTaGATACGACAGGCTGACGTACCTCTTGCCTCTTGTCCCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: STTSRCKWNKTHGCW*IRQADVPLASCPRV Trigger: AACTCTGGGACAAGAGGCAAGAGGTACGTCAGCCTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS-3UTR CAA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACGGATCCAGAATGGTCTaGATCTGTGACTCCAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PMLTVATERVTCKQELHYGSRMV*ICDSKL Trigger: CAGCTTGGAGTCACAGATCAAGACCATTCTGGATCC...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | ATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCAGGAACCATGTTTGTCTTCATTTaGACTGCCCTGCATCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: IISLVVLSLTAPASHSGTMFVFI*TALHQR Trigger: GCGTTGATGCAGGGCAGTCAAAATGAAGACAAACAT...GGTTCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTCGAGGTTCTGTGGGCTaGGGGTATCTGTCTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPPNPADVPAFQHIMILTRGSVG*GYLSLF Trigger: AAACAAAGACAGATACCCCAAGCCCACAGAACCTCG...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGGCACAGTCGCTTGGCTaGCTGCCCCACTCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSSMALVIVRPALNTNKMAQSLG*LPHSLS Trigger: GGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGC...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACCCAAAATCCTGTCTTaGAGGAAGCAAAGCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSHAYGCHRESNMQTRTSPKILS*RKQSSL Trigger: CAGACTGCTTTGCTTCCTCAAAGACAGGATTTTGGG...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTAGCTCTGGGCATAGCTaGTGGAGCAACAATCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VPPNPADVPAFQHIMILTSSGHS*WSNNPK Trigger: TTTGGGATTGTTGCTCCACAAGCTATGCCCAGAGCT...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCAGCATGGCCTTCCTCACTGGATGTTCTaGTTCGATTCATTTCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ENVSESSKIGVPFLQHGLPHWMF*FDSFRG Trigger: CCCTCGAAATGAATCGAACAAGAACATCCAGTGAGG...AAGGCCATGCTGGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | CAGTTGTGCTTCGCGCTCACATTGCCCCATTCACACCTGTTACTTCTCATTTTACAAGGGCTCTTGCTGTaGTCAGACTCTGACATCATG | + |
|
Preference number: 5 (lower is better) Translates to: QLCFALTLPHSHLLLLILQGLLL*SDSDIM Trigger: CATGATGTCAGAGTCTGACAACAGCAAGAGCCCTTG...TAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGCAGCTTTTGGTGGCTTaGGACGGGCTGGCGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSMALVIVRPALNTNKMQLLVA*DGLALA Trigger: TGCCAACGCCAGCCCGTCCAAAGCCACCAAAAGCTG...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 90 bp | CACTGGATGTTCTTGTTCGATTCATTTCGAGGGAGCGGATACAGCTaGGTCTCTTGGACAAGCACGATCCTGACTTCTCACTCAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HWMFLFDSFRGSGYS*VSWTSTILTSHSIL Trigger: CAAAATTGAGTGAGAAGTCAGGATCGTGCTTGTCCAAGAGACTCAGCTGTATCCGCTCCCTCGAAATGAATCGAACAAGAACATCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 90 bp | CTCTGCATCTCTGAGGACATCTTAAATAAGGACGATCCAAACCTCTaGTCCTCAAATAATCCCTGGGAACTGCTTAACAGAGCACCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCISEDILNKDDPNL*SSNNPWELLNRAPW Trigger: CCAGGGTGCTCTGTTAAGCAGTTCCCAGGGATTATTTGAGGATCAGAGGTTTGGATCGTCCTTATTTAAGATGTCCTCAGAGATGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 90 bp | CTCTGCAGGCTGGACACTGGCTATTATTCTTCAACCACAAGTCGATaGAAATGGAACAAAACACATGGTTGTTGGTGCATACGACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCRLDTGYYSSTTSR*KWNKTHGCWCIRQA Trigger: AGCCTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTGAAGAATAATAGCCAGTGTCCAGCCTGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS CCA 90 bp | AATCTCTTTGCAAGGGTTTTCAGGAGTGATCGGGACTCTGCAGGCTaGACACTGGCTATTATTCTTCAACCACAAGTCGATGCAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLFARVFRSDRDSAG*TLAIILQPQVDANG Trigger: TCCATTTGCATCGACTTGTGGTTGAAGAATAATAGCCAGTGTCCAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTTGCAAAGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS CCA 90 bp | AACCGTTATTACAAGGGCTCTTGCTGTTGTCAGACTCTGACATCATaGAGTCCAGCTCAGAGATTTTGTCGAGATAAGCAGCATCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NRYYKGSCCCQTLTS*SPAQRFCRDKQHPW Trigger: CCATGGATGCTGCTTATCTCGACAAAATCTCTGAGCTGGACTCCATGATGTCAGAGTCTGACAACAGCAAGAGCCCTTGTAATAACGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTCGTTCTAGAGCTTTCTaGAGGCGATTGGTTTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: VPPNPADVPAFQHIMILTRSRAF*RRLVSR Trigger: ACGTGAAACCAATCGCCTCAAGAAAGCTCTAGAACG...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | ATTATTTCTCTTGTCGTTCTCTCCCTTACAGCACCTGCCTCCCACTCAGGAACCGTGAGGTACATACTTTaGAGGAGATCTGTTGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IISLVVLSLTAPASHSGTVRYIL*RRSVVN Trigger: GTTGACAACAGATCTCCTCAAAAGTATGTACCTCAC...GGTTCCTGAGTGGGAGGCAGGTGCTGTAAGGGAGAGAACGACAAGAGAAATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS CCA 90 bp | AGGCTGGACACTGGCTATTATTCTTCAACCACAAGTCGATGCAAATaGAACAAAACACATGGTTGTTGGTGCATACGACAGGCTGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLDTGYYSSTTSRCK*NKTHGCWCIRQADV Trigger: TACGTCAGCCTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTGAAGAATAATAGCCAGTGTCCAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCAGTATCTGTCTTTGTTTaGGGGACAGTTTGGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSHAYGCHRESNMQTRTSVSVFV*GTVWFS Trigger: ACTGAACCAAACTGTCCCCAAAACAAAGACAGATAC...TGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCTGGTTTGCATGCTTTTaGGAGCTCCCTGCTTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFWFACF*ELPALI Trigger: GATCAAAGCAGGGAGCTCCAAAAAGCATGCAAACCA...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTTTATTACAAGGGCTCTaGCTGTTGTCAGACTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPPNPADVPAFQHIMILTLLQGL*LLSDSD Trigger: GTCAGAGTCTGACAACAGCAAGAGCCCTTGTAATAA...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCCAAACCCAGCTGATGTGCCTGCCTTCCAACACATAATGATTCTAACTCTTCCTTCTTGTAACTaGTCAGGTTCCTCGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VPPNPADVPAFQHIMILTLPSCN*SGSSRN Trigger: GTTTCTCGAGGAACCTGACAAGTTACAAGAAGGAAG...AGTTAGAATCATTATGTGTTGGAAGGCAGGCACATCAGCTGGGTTTGGAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | CCCATGCTTACGGTTGCCACAGAGAGAGTAACATGCAAACAAGAACTTCACTACCTCTGTATCTTTCTCTaGGTTGACTGGTTCCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PMLTVATERVTCKQELHYLCIFL*VDWFPF Trigger: GAATGGGAACCAGTCAACCAAGAGAAAGATACAGAG...GTAGTGAAGTTCTTGTTTGCATGTTACTCTCTCTGTGGCAACCGTAAGCATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 90 bp | TCCACGTCTTCCTTGGCCTCCTCTGAGTGTTTCAGGTGTGCTACTTaGGACTCTAGTTCCTCTATATATTTATCACTTCGTTCTAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: STSSLASSECFRCAT*DSSSSIYLSLRSRA Trigger: AGCTCTAGAACGAAGTGATAAATATATAGAGGAACTAGAGTCTCAAGTAGCACACCTGAAACACTCAGAGGAGGCCAAGGAAGACGTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCATGTTTGTCTTCATTTaGACTGCCCTGCATCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFMFVFI*TALHQR Trigger: GCGTTGATGCAGGGCAGTCAAAATGAAGACAAACAT...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | AAGAGAACAAACAACACAGAGACAAATCCGATCATCTCTCTAAGCTCTCTGGTTATACAGCTGAGTCTCTaGGACAAGCACGATCCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRTNNTETNPIISLSSLVIQLSL*DKHDPD Trigger: GTCAGGATCGTGCTTGTCCAAGAGACTCAGCTGTAT...AACCAGAGAGCTTAGAGAGATGATCGGATTTGTCTCTGTGTTGTTTGTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | GTACTTTTAAATCCTACACTAACAGTTGTGCTTCGCGCTCACATTGCCCCATTCGCTGTGAGAGCAGGTTaGGAAAGGTTCAGTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VLLNPTLTVVLRAHIAPFAVRAG*ERFSLL Trigger: AAGTAAACTGAACCTTTCCAAACCTGCTCTCACAGC...GAATGGGGCAATGTGAGCGCGAAGCACAACTGTTAGTGTAGGATTTAAAAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | CAGTTGTGCTTCGCGCTCACATTGCCCCATTCACACCTGTTACTTCTCATTTTAAAACAGTTTGGAGGTTaGACCTCACTAGTTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLCFALTLPHSHLLLLILKQFGG*TSLVPE Trigger: TTCAGGAACTAGTGAGGTCAAACCTCCAAACTGTTT...TAAAATGAGAAGTAACAGGTGTGAATGGGGCAATGTGAGCGCGAAGCACAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 90 bp | TCCATTTTACTTGGATTATCGGCCAGTGGATGTTTGTCTTCATTTTaGCTGCCCTGCATCAACGCTAAAGGATCCAGAATGGTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SILLGLSASGCLSSF*LPCINAKGSRMVLI Trigger: GATCAAGACCATTCTGGATCCTTTAGCGTTGATGCAGGGCAGTCAAAATGAAGACAAACATCCACTGGCCGATAATCCAAGTAAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS TCA 90 bp | CTCTGTCTGAAACAAACAGTTTGGAGGTTTGACCTCACTAGTTCCTaGATGAGAAGTGGAGTGGAGAGAAAAATCTTCACTCATCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLKQTVWRFDLTSS*MRSGVERKIFTHLV Trigger: CACGAGATGAGTGAAGATTTTTCTCTCCACTCCACTTCTCATTCAGGAACTAGTGAGGTCAAACCTCCAAACTGTTTGTTTCAGACAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | ATAAAACCTAAGAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCGCTTTCTTGAGGCGATaGGTTTCACGTTCATACTGT | + |
|
Preference number: 5 (lower is better) Translates to: IKPKKTSVNPLRSECHFSAFLRR*VSRSYC Trigger: ACAGTATGAACGTGAAACCAATCGCCTCAAGAAAGC...GGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTCTTAGGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | ATAAAACCTAAGAAAACGTCAGTGAATCCTCTAAGATCGGAGTGCCATTTCTCCGTATCTTTCTCTTGGTaGACTGGTTCCCATTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: IKPKKTSVNPLRSECHFSVSFSW*TGSHSY Trigger: GTAAGAATGGGAACCAGTCAACCAAGAGAAAGATAC...GGAGAAATGGCACTCCGATCTTAGAGGATTCACTGACGTTTTCTTAGGTTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 90 bp | ACTCTAGTTCCTCTATATATTTATCACTTCGTTCTAGAGCTTTCTTaGGGCGATTGGTTTCACGTTCATACTGTTCTACTTTGGACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TLVPLYIYHFVLELS*GDWFHVHTVLLWTE Trigger: TTCAGTCCAAAGTAGAACAGTATGAACGTGAAACCAATCGCCTCAAGAAAGCTCTAGAACGAAGTGATAAATATATAGAGGAACTAGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS-3UTR CAA 90 bp | TTCTCCAGCATGGCCTTGGTAATAGTTAGGCCAGCATTAAACACAAATAAAATGTCATCCTCTGAAGAATaGTTATTACAGGCATTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FSSMALVIVRPALNTNKMSSSEE*LLQAFG Trigger: TCCAAATGCCTGTAATAACAATTCTTCAGAGGATGA...CATTTTATTTGTGTTTAATGCTGGCCTAACTATTACCAAGGCCATGCTGGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | TTGGTGGTCCAAGCTCATCGCTGCCGTTGGGCCCCTTaGTATCTGCAGAGGGTGCCCTCTGGCACAGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVVQAHRCRWAP*YLQRVPSGTEH Trigger: ATGCTCTGTGCCAGAGGGCACCCTCTGCAGATAGCAAGGGGCCCAACGGCAGCGATGAGCTTGGACCACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | TTTGGTGGTCCAAGCTCATCGCTGCCGTTGGGCCCCTaGCTATCTGCAGAGGGTGCCCTCTGGCACAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FGGPSSSLPLGP*LSAEGALWHRA Trigger: TGCTCTGTGCCAGAGGGCACCCTCTGCAGATAGCAAGGGGCCCAACGGCAGCGATGAGCTTGGACCACCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | GAGTCAGCTAGTCTGCTGCTAGAAGGTGAGGCCAGGTaGGAAGCACTGGCCGAGCCAGCCTGCTTTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ESASLLLEGEAR*EALAEPACFLA Trigger: TGCCAGAAAGCAGGCTGGCTCGGCCAGTGCTTCTCACCTGGCCTCACCTTCTAGCAGCAGACTAGCTGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 72 bp | TCTGATTCTTTGGTGGTCCAAGCTCATCGCTGCCGTTaGGCCCCTTGCTATCTGCAGAGGGTGCCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SDSLVVQAHRCR*APCYLQRVPSG Trigger: GCCAGAGGGCACCCTCTGCAGATAGCAAGGGGCCCAACGGCAGCGATGAGCTTGGACCACCAAAGAATCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | CTGGCCGAGCCAGCCTGCTTTCTGGCACTGTCACTCTaGTTCTTTGGTGGTCCAAGCTCATCGCTGCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAEPACFLALSL*FFGGPSSSLPL Trigger: CAACGGCAGCGATGAGCTTGGACCACCAAAGAATCAGAGTGACAGTGCCAGAAAGCAGGCTGGCTCGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 72 bp | AGGGTGCCCTCTGGCACAGAGCATCCACGTCTTCCTTaGCCTCCTCTGAGTGTTTCAGGTGTGCTACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RVPSGTEHPRLP*PPLSVSGVLLE Trigger: CTCAAGTAGCACACCTGAAACACTCAGAGGAGGCCAAGGAAGACGTGGATGCTCTGTGCCAGAGGGCACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | TGTAACTTGTCAGGTTCCTCGAGAAACTCCCTGCCTTaGGGTGACTTTGAGGGCCCCTCCACCTCCACCGAT | + |
|
Preference number: 6 (lower is better) Translates to: CNLSGSSRNSLP*GDFEGPSTSTD Trigger: ATCGGTGGAGGTGGAGGGGCCCTCAAAGTCACCTCAAGGCAGGGAGTTTCTCGAGGAACCTGACAAGTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | TGCTGCCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAGTCTCTCTaGCACCCAGCCGAGGTTCTGTGGGCTTGGGGTATCTGTCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCPTLFPSKCPSESL*HPAEVLWAWGICLC Trigger: ACAAAGACAGATACCCCAAGCCCACAGAACCTCGGCTGGGTGCAAGAGAGACTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | CTTCTTGTAACTTGTCAGGTTCCTCGAGAAACTCCCTaGCTTGAGGTGACTTTGAGGGCCCCTCCACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLVTCQVPRETP*LEVTLRAPPPP Trigger: TGGAGGTGGAGGGGCCCTCAAAGTCACCTCAAGGCAGGGAGTTTCTCGAGGAACCTGACAAGTTACAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | ACTCTCTTTCCAAGTAAGTGTCCATCGGAGTCTCTCTaGCACCCAGCCGAGGTTCTGTGGGCTTGGGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: TLFPSKCPSESL*HPAEVLWAWGI Trigger: GATACCCCAAGCCCACAGAACCTCGGCTGGGTGCAAGAGAGACTCCGATGGACACTTACTTGGAAAGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | CATCCTCTTTGTAAGGTGCACAGTCGCTTGGCTTGCTaGCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HPLCKVHSRLAC*PTLFPSKCPSE Trigger: CTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | GCTCATCCTCTTTGTAAGGTGCACAGTCGCTTGGCTTaGTGCCCCACTCTCTTTCCAAGTAAGTGTCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: AHPLCKVHSRLA*CPTLFPSKCPS Trigger: CGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | TTTTGGTGGCTTTGGACGGGCTGGCGTTGGCAAGGCTaGTCTGTATCTTTCTCTTGGTTGACTGGTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FWWLWTGWRWQG*SVSFSWLTGSH Trigger: ATGGGAACCAGTCAACCAAGAGAAAGATACAGAGCAGCCTTGCCAACGCCAGCCCGTCCAAAGCCACCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 72 bp | GAGTCTCTCTTGCACCCAGCCGAGGTTCTGTGGGCTTaGGGTATCTGTCTTTGTTTTGGGGACAGTTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ESLLHPAEVLWA*GICLCFGDSLV Trigger: AACCAAACTGTCCCCAAAACAAAGACAGATACCCCAAGCCCACAGAACCTCGGCTGGGTGCAAGAGAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | ATGGTTGTTGGTGCATACGACAGGCTGACGTACCTCTaGCCTCTTGTCCCAGAGTTGAGAGCACGCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: MVVGAYDRLTYL*PLVPELRARFS Trigger: TGAGAAGCGTGCTCTCAACTCTGGGACAAGAGGCAAGAGGTACGTCAGCCTGTCGTATGCACCAACAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS CAA 90 bp | CTGGGATACCATAAAGCTCATCCTCTTTGTAAGGTGCACAGTCGCTaGGCTTGCTGCCCCACTCTCTTTCCAAGTAAGTGTCCATCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGYHKAHPLCKVHSR*ACCPTLFPSKCPSE Trigger: CTCCGATGGACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATGGTATCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | ACAAAACACATGGTTGTTGGTGCATACGACAGGCTGACGTACCTCTaGCCTCTTGTCCCAGAGTTGAGAGCACGCTTCTCATTCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TKHMVVGAYDRLTYL*PLVPELRARFSFFP Trigger: GGGGAAGAATGAGAAGCGTGCTCTCAACTCTGGGACAAGAGGCAAGAGGTACGTCAGCCTGTCGTATGCACCAACAACCATGTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS GCA 72 bp | AGCTGGGATACCATAAAGCTCATCCTCTTTGTAAGGTaGACAGTCGCTTGGCTTGCTGCCCCACTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWDTIKLILFVR*TVAWLAAPLSF Trigger: GAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATGGTATCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | GGCCCCTCCACCTCCACCGATTTAAAACCGTTATTACAAGGGCTCTaGCTGTTGTCAGACTCTGACATCATGGAGTCCAGCTCAGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: GPSTSTDLKPLLQGL*LLSDSDIMESSSEI Trigger: AATCTCTGAGCTGGACTCCATGATGTCAGAGTCTGACAACAGCAAGAGCCCTTGTAATAACGGTTTTAAATCGGTGGAGGTGGAGGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | CTAAAGGGTCAAAGGGGAACCACAGCCCATTGGAGTTaGAATGGCCTCACTCTGTGTGTGAGGTACATACTT | + |
|
Preference number: 6 (lower is better) Translates to: LKGQRGTTAHWS*NGLTLCVRYIL Trigger: AAGTATGTACCTCACACACAGAGTGAGGCCATTGCAACTCCAATGGGCTGTGGTTCCCCTTTGACCCTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227640.2 |
||
| CDS CCA 72 bp | GCAAGGGTTTTCAGGAGTGATCGGGACTCTGCAGGCTaGACACTGGCTATTATTCTTCAACCACAAGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARVFRSDRDSAG*TLAIILQPQVD Trigger: ATCGACTTGTGGTTGAAGAATAATAGCCAGTGTCCAGCCTGCAGAGTCCCGATCACTCCTGAAAACCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS CAA 72 bp | CCTCTGAACCGTCAAACTCCAAGCTCTGGGCATAGCTaGTGGAGCAACAATCCCAAAATCCTGTCTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLNRQTPSSGHS*WSNNPKILSLR Trigger: CCTCAAAGACAGGATTTTGGGATTGTTGCTCCACAAGCTATGCCCAGAGCTTGGAGTTTGACGGTTCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | TTGCGTTTCCCTCTGAACCGTCAAACTCCAAGCTCTGGGCATAGCTaGTGGAGCAACAATCCCAAAATCCTGTCTTTGAGGAAGCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRFPLNRQTPSSGHS*WSNNPKILSLRKQS Trigger: GCTTTGCTTCCTCAAAGACAGGATTTTGGGATTGTTGCTCCACAAGCTATGCCCAGAGCTTGGAGTTTGACGGTTCAGAGGGAAACGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | TATCTCCCCAACAGAGTTTGCTATTGCGTTTCCCTCTaGACCGTCAAACTCCAAGCTCTGGGCATAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: YLPNRVCYCVSL*TVKLQALGIAC Trigger: ACAAGCTATGCCCAGAGCTTGGAGTTTGACGGTTCAGAGGGAAACGCAATAGCAAACTCTGTTGGGGAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 72 bp | ATAAAGCTCATCCTCTTTGTAAGGTGCACAGTCGCTTaGCTTGCTGCCCCACTCTCTTTCCAAGTAAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IKLILFVRCTVA*LAAPLSFQVSV Trigger: GACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CCA 72 bp | TTTTGTCGAGATAAGCAGCATCCATGGACGCCTCACTaGATGTTCTTGTTCGATTCATTTCGAGGGAGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: FCRDKQHPWTPH*MFLFDSFRGSG Trigger: TCCGCTCCCTCGAAATGAATCGAACAAGAACATCCAGTGAGGCGTCCATGGATGCTGCTTATCTCGACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | CATAAAGCTCATCCTCTTTGTAAGGTGCACAGTCGCTaGGCTTGCTGCCCCACTCTCTTTCCAAGTAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HKAHPLCKVHSR*ACCPTLFPSKC Trigger: ACACTTACTTGGAAAGAGAGTGGGGCAGCAAGCCAAGCGACTGTGCACCTTACAAAGAGGATGAGCTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | CCCCCACTCTCTAACCCGTCAGCTGTGAGAGCAGGTTaGGAAAGGTTCAGTTTACTTCCTTCTTGTAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PPLSNPSAVRAG*ERFSLLPSCNL Trigger: CAAGTTACAAGAAGGAAGTAAACTGAACCTTTCCAAACCTGCTCTCACAGCTGACGGGTTAGAGAGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | ACTTCTCACTCAATTTTGAAGGTATCTCCCCAACAGAGTTTGCTATaGCGTTTCCCTCTGAACCGTCAAACTCCAAGCTCTGGGCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSHSILKVSPQQSLL*RFPLNRQTPSSGHS Trigger: GCTATGCCCAGAGCTTGGAGTTTGACGGTTCAGAGGGAAACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAATTGAGTGAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | ATCCTGACTTCTCACTCAATTTTGAAGGTATCTCCCCAACAGAGTTaGCTATTGCGTTTCCCTCTGAACCGTCAAACTCCAAGCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ILTSHSILKVSPQQS*LLRFPLNRQTPSSG Trigger: CCCAGAGCTTGGAGTTTGACGGTTCAGAGGGAAACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAATTGAGTGAGAAGTCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | AGTCGATGCAAATGGAACAAAACACATGGTTGTTGGTaGATACGACAGGCTGACGTACCTTCCCCAAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SRCKWNKTHGCW*IRQADVPSPSK Trigger: TTTGCTTGGGGAAGGTACGTCAGCCTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS GCA 72 bp | AGTCGATGCAAATGGAACAAAACACATGGTTGTTGGTaGATACGACAGGCTGACGTACCTCTTGCCTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRCKWNKTHGCW*IRQADVPLASC Trigger: ACAAGAGGCAAGAGGTACGTCAGCCTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228210.2 |
||
| CDS CCA 72 bp | TACAAGGGCTCTTGCTGTTGTCAGACTCTGACATCATaGAGTCCAGCTCAGAGATTTTGTCGAGATAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YKGSCCCQTLTS*SPAQRFCRDKQ Trigger: CTGCTTATCTCGACAAAATCTCTGAGCTGGACTCCATGATGTCAGAGTCTGACAACAGCAAGAGCCCTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | CGATTCATTTCGAGGGAGCGGATACAGCTGAGTCTCTaGGACAAGCACGATCCTGACTTCTCACTCAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: RFISRERIQLSL*DKHDPDFSLNF Trigger: AAAATTGAGTGAGAAGTCAGGATCGTGCTTGTCCAAGAGACTCAGCTGTATCCGCTCCCTCGAAATGAATCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | ACCTCCACCGATTTAAAACCGTTATTACAAGGGCTCTaGCTGTTGTCAGACTCTGACATCATGGAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTDLKPLLQGL*LLSDSDIMESS Trigger: GCTGGACTCCATGATGTCAGAGTCTGACAACAGCAAGAGCCCTTGTAATAACGGTTTTAAATCGGTGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 90 bp | GTTCTTGTTCGATTCATTTCGAGGGAGCGGATACAGCTGAGTCTCTaGGACAAGCACGATCCTGACTTCTCACTCAATTTTGAAGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: VLVRFISRERIQLSL*DKHDPDFSLNFEGI Trigger: GATACCTTCAAAATTGAGTGAGAAGTCAGGATCGTGCTTGTCCAAGAGACTCAGCTGTATCCGCTCCCTCGAAATGAATCGAACAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | CTTGGATTATCGGCCAGTGGATGTTTGTCTTCATTTTaGCTGCCCTGCATCAACGCTAAAGGATCCAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: LGLSASGCLSSF*LPCINAKGSRM Trigger: CATTCTGGATCCTTTAGCGTTGATGCAGGGCAGTCAAAATGAAGACAAACATCCACTGGCCGATAATCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS GCA 72 bp | GATTATCGGCCAGTGGATGTTTGTCTTCATTTTGACTaGCCTGCATCAACGCTAAAGGATCCAGAATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DYRPVDVCLHFD*PASTLKDPEWS Trigger: AGACCATTCTGGATCCTTTAGCGTTGATGCAGGGCAGTCAAAATGAAGACAAACATCCACTGGCCGATAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS CCA 72 bp | CCAGCTCAGAGATTTTGTCGAGATAAGCAGCATCCATaGACGCCTCACTGGATGTTCTTGTTCGATTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: PAQRFCRDKQHP*TPHWMFLFDSF Trigger: AAATGAATCGAACAAGAACATCCAGTGAGGCGTCCATGGATGCTGCTTATCTCGACAAAATCTCTGAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | TCAATTTTGAAGGTATCTCCCCAACAGAGTTTGCTATaGCGTTTCCCTCTGAACCGTCAAACTCCAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SILKVSPQQSLL*RFPLNRQTPSS Trigger: AGAGCTTGGAGTTTGACGGTTCAGAGGGAAACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | TCTCACTCAATTTTGAAGGTATCTCCCCAACAGAGTTaGCTATTGCGTTTCCCTCTGAACCGTCAAACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHSILKVSPQQS*LLRFPLNRQTP Trigger: TGGAGTTTGACGGTTCAGAGGGAAACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAATTGAGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | TCTTGGACAAGCACGATCCTGACTTCTCACTCAATTTaGAAGGTATCTCCCCAACAGAGTTTGCTATTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SWTSTILTSHSI*KVSPQQSLLLR Trigger: ACGCAATAGCAAACTCTGTTGGGGAGATACCTTCAAAATTGAGTGAGAAGTCAGGATCGTGCTTGTCCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | TCCTTGGCCTCCTCTGAGTGTTTCAGGTGTGCTACTTaGGACTCTAGTTCCTCTATATATTTATCACTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SLASSECFRCAT*DSSSSIYLSLR Trigger: ACGAAGTGATAAATATATAGAGGAACTAGAGTCTCAAGTAGCACACCTGAAACACTCAGAGGAGGCCAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | TCTGAGGACATCTTAAATAAGGACGATCCAAACCTCTaGTCCTCAAATAATCCCTGGGAACTGCTTAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SEDILNKDDPNL*SSNNPWELLNR Trigger: TCTGTTAAGCAGTTCCCAGGGATTATTTGAGGATCAGAGGTTTGGATCGTCCTTATTTAAGATGTCCTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS GCA 72 bp | CTGGACACTGGCTATTATTCTTCAACCACAAGTCGATaGAAATGGAACAAAACACATGGTTGTTGGTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: LDTGYYSSTTSR*KWNKTHGCWCI Trigger: TATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTGAAGAATAATAGCCAGTGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS CCA 72 bp | ACTGGCTATTATTCTTCAACCACAAGTCGATGCAAATaGAACAAAACACATGGTTGTTGGTGCATACGACAG | + |
|
Preference number: 6 (lower is better) Translates to: TGYYSSTTSRCK*NKTHGCWCIRQ Trigger: CTGTCGTATGCACCAACAACCATGTGTTTTGTTCCATTTGCATCGACTTGTGGTTGAAGAATAATAGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS CAA 72 bp | TCTTCCACTCTACTACTGAGTCTGGGTCCATTTTACTaGGATTATCGGCCAGTGGATGTTTGTCTTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSTLLLSLGPFY*DYRPVDVCLHF Trigger: AAAATGAAGACAAACATCCACTGGCCGATAATCCAAGTAAAATGGACCCAGACTCAGTAGTAGAGTGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022716.4 ENSMUST00000227640.2 ENSMUST00000228448.2 |
||
| CDS TCA 72 bp | AAACAAACAGTTTGGAGGTTTGACCTCACTAGTTCCTaGATGAGAAGTGGAGTGGAGAGAAAAATCTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: KQTVWRFDLTSS*MRSGVERKIFT Trigger: AGTGAAGATTTTTCTCTCCACTCCACTTCTCATTCAGGAACTAGTGAGGTCAAACCTCCAAACTGTTTGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | CATAGCTTGTGGAGCAACAATCCCAAAATCCTGTCTTaGAGGAAGCAAAGCAGTCTGATTTCTTTTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: HSLWSNNPKILS*RKQSSLISFHF Trigger: AAAATGAAAAGAAATCAGACTGCTTTGCTTCCTCAAAGACAGGATTTTGGGATTGTTGCTCCACAAGCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS TCA 72 bp | CCTCTATATATTTATCACTTCGTTCTAGAGCTTTCTTaGGGCGATTGGTTTCACGTTCATACTGTTCTACTT | + |
|
Preference number: 6 (lower is better) Translates to: PLYIYHFVLELS*GDWFHVHTVLL Trigger: AAGTAGAACAGTATGAACGTGAAACCAATCGCCTCAAGAAAGCTCTAGAACGAAGTGATAAATATATAGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||
| CDS CAA 72 bp | TCCTCTATATATTTATCACTTCGTTCTAGAGCTTTCTaGAGGCGATTGGTTTCACGTTCATACTGTTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: SSIYLSLRSRAF*RRLVSRSYCST Trigger: AGTAGAACAGTATGAACGTGAAACCAATCGCCTCAAGAAAGCTCTAGAACGAAGTGATAAATATATAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022716.4 |
||